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At least 307 records · Page 17

Validation of Soil Moisture Data Products from the NASA SMAP Mission

The National Aeronautics and Space Administration (NASA)Soil Moisture Active Passive(SMAP) mission has been validatingits soil moisture (SM) products since the start of data production onMarch 31, 2015. Prior to launch, the mission defined a set of criteria for core validation sites (CVS) that enable the testing of the key mission SM accuracy requirement(unbiased root-mean-square error <0.04 m3/m3). Thevalidation approach also includes other (“sparse network”) in situSM measurements, satellite SM products, model-based SM products, and field experiments. Over the past six years, the SMAP SM products have been analyzed with respect to thesereference data,and the analysis approaches themselves have been scrutinizedin an effort to best understand the products’ performance. Validation of themost recent SMAP Level 2 and 3 SMretrievalproducts (R17000) shows that the L-band (1.4 GHz) radiometer-based SM record continues to meet mission requirements. The products aregenerallyconsistentwith SM retrievals from the European Space Agency (ESA)Soil Moisture Ocean Salinity mission, althoughthere aredifferencesin some regions. The high-resolution (3-km) SM retrieval product,generated by combining Copernicus Sentinel-1 data with SMAP observations,performswithin expectations. Currently, however,there is limited availability of3-kmCVSdatato support extensive validation at this spatial scale. The most recent (version 5)SMAP Level4 SMdata assimilation productprovidingsurface and root-zone SM with complete spatio-temporal coverageat 9-km resolution also meets performance requirements. The SMAP SM validation program will continue throughout the mission life; futureplans include expanding ittoforestedand high-latituderegions

SMAP↗

Improving the SMAP Level-4 Soil Moisture Product

The NASA Soil Moisture Active Passive (SMAP) mission generates, among other data sets, the Level 4 Soil Moisture (L4 SM) product. The L4 SM algorithm is based on the assimilation of SMAP radiometer brightness temperature observations into the NASA Catchment land surface model using a spatially distributed ensemble Kalman filter. The L4 SM data are published with a mean latency of approx. 2.5 days from the time of observation and provide global, three-hourly, 9 km resolution estimates of surface and root-zone soil moisture and related land surface states and fluxes. In 2018, the product was upgraded from Version 3 to Version 4. Underlying the new version is a revised modeling system that includes improved input parameter datasets for land cover, topography, and vegetation height that are based on recent, high quality space-borne remote sensing observations. Land cover inputs were updated to the GlobCover2009 product, which is based on satellite observations from the Medium Resolution Imaging Spectrometer. Topographic statistics now rely on observations from the Shuttle Radar Topography Mission. Finally, vegetation height inputs are derived from space-borne Lidar measurements. Additionally, SMAP Level-2 soil moisture retrievals and in situ soil moisture measurements were used to calibrate a particular Catchment model parameter that governs the recharge of soil moisture from the models root-zone excess reservoir into the surface excess reservoir. Specifically, the replenishment of soil moisture near the surface from below under non-equilibrium conditions was substantially reduced, which brings the models surface soil moisture more in line with the SMAP Level 2 and in situ soil moisture. Finally, the calibration of the assimilated SMAP brightness temperatures changed substantially from Version 3 to Version 4. Considerable effort went into the version upgrade, creating an expectation that the new version is improved over the old version. Indeed, some aspects of the new version are clearly better. However, other aspects are not, and on balance, the overall improvement is modest at best. In this presentation we summarize the skill of the new and old versions vs. independent in situ measurements and in terms of data assimilation diagnostics, including, for example, the statistics of the (soil moisture) analysis increments and the observation minus forecast (brightness temperatures) residuals. We share our experience with trying to improve to the L4 SM product and the lessons learned from the effort.

Reichle, Rolf↗

Wounding rapidly alters transcription factor expression, hormonal signaling, and phenolic compound metabolism in harvested sugarbeet roots

Injuries sustained by sugarbeet (Beta vulgaris L.) roots during harvest and postharvest operations seriously reduce the yield of white sugar produced from stored roots. Although wound healing is critically important to reduce losses, knowledge of these processes is limited for this crop as well as for roots in other species. To better understand the metabolic signals and changes that occur in wounded roots, dynamic changes in gene expression were determined by RNA sequencing and the activity of products from key genes identified in this analysis were determined in the 0.25 to 24 h following injury. Nearly five thousand differentially expressed genes that contribute to a wide range of cellular and molecular functions were identified in wounded roots. Highly upregulated genes included transcription factor genes, as well as genes involved in ethylene and jasmonic acid (JA) biosynthesis and signaling and phenolic compound biosynthesis and polymerization. Enzyme activities for key genes in ethylene and phenolic compound biosynthesis and polymerization also increased due to wounding. Results indicate that wounding causes a major reallocation of metabolism in sugarbeet taproots. Although both ethylene and JA are likely involved in triggering wound responses, the greater and more sustained upregulation of ethylene biosynthesis and signaling genes relative to those of JA, suggest a preeminence of ethylene signaling in wounded sugarbeet roots. Changes in gene expression and enzymes involved in phenolic compound metabolism additionally indicate that barriers synthesized to seal off wounds, such as suberin or lignin, are initiated within the first 24 h after injury.

59 BASIC BIOLOGICAL SCIENCES↗

Impacts of nitrogen addition on switchgrass root-associated diazotrophic community structure and function

ABSTRACT Cellulosic bioenergy crops, like switchgrass (Panicum virgatum), have potential for growth on lands unsuitable for food production coupled with potential for climate mitigation. Sustainability of these systems lies in identifying conditions that promote high biomass yields on marginal lands under low-input agricultural practices. Associative nitrogen fixation (ANF) is a potentially important nitrogen (N) source for these crops, yet ANF contributions to plant N, especially under fertilizer N addition are unclear. In this study, we assess structure (nifH) and function (ANF) of switchgrass root-associated diazotrophic communities to long-term and short-term N additions using soil from three marginal land sites. ANF rates were variable and often unexpectedly high, sometimes 10× greater than reported in the literature, and did not respond in repeatable ways to long-term or short-term N. We found few impacts of N addition on root-associated diazotrophic community structure or membership. Instead, we found a very consistent root-associated diazotrophic community even though switchgrass seeds were germinated in soil from field sites with distinct diazotrophic communities. Ultimately, this work demonstrates that root-associated diazotrophic communities have the potential to contribute to switchgrass N demands, independent of N addition, and this may be driven by selection of the diazotrophic community by switchgrass roots.

Microbiology↗

Atmospheric radar sounding

Monostatic and bistatic radar techniques for the measurement of the structure of volume targets in the troposphere and lower stratosphere are reviewed. The targets considered are thin turbulent layers in the lower stratosphere and rain in the troposphere. The measurements of scattering from thin turbulent layers show that layers are generally detected at or near the tropopause, and in 31 out of 34 sets of measurements, layers were detected above the tropopause in the lower 10 km of the stratosphere. The threshold for turbulent layer detection corresponds to an equivalent thickness product of ten to the minus 13th power times the cube root of m at a range of 100 km and for layers with less than 1000 m thickness. The measurement of scattering by rain shows that in the New England area both convective and widespread rain consists of a number of small cells. On average, the cells appear to have a half-intensity width of 3 to 4 km as measured with a radar system with a 1.8 km resolution cell size for cells at 100 km range.

Crane, R. K.↗

Shuttle elevon cove aerodynamic heating by internal flow

The thermal response of the cove seal area of the Shuttle elevon wing junction is investigated in an arc heated supersonic duct. The temperature response of the seal area is measured for various seal gap widths, ambient pressures, and enthalpies to determine the dependence of internal heating on these parameters. A correlation of the results shows that the internal heating to the seal is proportional to the product of the external pressure, the gap width and the square root of the total enthalphy. Temperatures at the end of a simulated Shuttle entry compare well with predictions based on this correlation for the narrower gap widths where there is only a small pressure drop at the cove inlet. Similar predictions are made for Shuttle flight as a function of seal gap widths to determine the maximum gap width allowable, yet not exceed design temperatures on the structure.

Scott, C. D.↗

Irrigation System for Microgravity (Candidate): The Passive Porous Tube Nutrient Delivery System (PPTNDS)

In an effort to supplement astronauts’ diets with fresh produce during future long-term space missions, the team at NASA Kennedy Space Center is working on methods to better deliver water and nutrients to plant root zones, with the desire to create a more reliable vegetable production system. Effectively doing this in microgravity has proven to be one of the biggest challenges experienced. Here, we detail the development and testing of the Passive Porous Tube Nutrient Delivery System (PPTNDS).

Jacob Torres↗

Multi-Frequency Radiometer-Based Soil Moisture Retrieval and Algorithm Parameterization Using In Situ Sites

L-band brightness temperature (TB) has been shown to provide the best sensitivity to soil moisture (SM) although C- and X-band based products offer a longer time-series from satellite-based measurements. Currently, global coverage SM is routinely produced from spaceborne measurements using all three frequency bands, but despite continued validation efforts of the products, the relative characteristics and performance of these observations have not been fully established. Therefore, this study focused on the parametrization of SM retrieval algorithms at L-, C- and X-bands using TB observations from the L-band radiometer on NASA's SM Active Passive (SMAP) mission and the C- and X-band channels of JAXA's Advanced Microwave Scanning Radiometer 2 (AMSR2) onboard the GCOM-W satellite. These can be applied in global SM retrieval algorithms using either one of the frequencies or a combination of them. The reference in situ SM data was obtained from 12 core validation sites across various land cover types around the world. The investigation highlighted the known challenges of retrieving SM from C- and X-band data compared to the higher sensitivity of the L-band data. Even with a site-specific retrieval algorithm parameterization, the mean correlation of the C- and X-band retrievals for the core validation site SM measurement were much lower than that for L-band, being 0.52 (0.54) and 0.45 (0.47) for vertical (horizontal) polarization, respectively, while for the L-band retrieval the corresponding values were 0.81 (0.77). The parameterization exercise showed that matching the C- and X-band TB measurements with an emission model was not difficult; the problem was relating the observations to SM under the influence of large roughness and vegetation effects. As a result, parameter optimization produced values for some sites that were not realistic or did not allow any practical sensitivity to SM at C- and X-band. Considering the L-band observations, the parameter optimization resulted in superior bias performance as compared to the operational SMAP product parameterization, but the sensitivity to SM changes (R and unbiased root mean square difference) did not improve markedly, or in some cases degraded at the expense of a smaller bias.

passive microwave↗

Investigation of rotor blade roughness effects on turbine performance

The cold air test program was completed on the SSME (Space Shuttle Main Engine) HPFTP (High Pressure Fuel Turbopump) turbine with production nozzle vane rings and polished coated rotor blades with a smooth surface finish of 30 microinch (0.76 micrometer) RMS (Root Mean Square). The smooth blades were polished by an abrasive flow machining process. The test results were compared with the air test results from production rough coated rotor blades with a surface finish of up to 400 microinch (10.16 micrometer) RMS. Turbine efficiency was higher for the smooth blades over the entire range tested. Efficiency increased 2.1 percentage points at the SSME 104 percent RPL (Rated Power Level) condition. This efficiency improvement could reduce the SSME HPFTP turbine inlet temperature by 57 degrees Rankine (32 degrees Kelvin) increasing turbine durability. The turbine flow parameter increased and the mid-span outlet swirl angle became more axial with the smooth rotor blades.

Boynton, J. L.↗

Shifts in belowground processes along a temperate forest edge

Abstract Context Forests are increasingly fragmented, and as a result most forests in the United States are within one km of an edge. Edges change environmental conditions of the forest—especially radiation, roughness, temperature, and moisture—that can have consequences for plant productivity and ecosystem functions. However, edge effects on aboveground characteristics of plants and the environment are better understood relative to plant roots and soil in the belowground environment. Objectives Our main objectives were to determine if soil C pools and fluxes are higher at the edge relative to other landscape positions, and to understand how specific belowground processes contribute to bulk differences in pools and fluxes. Methods We measured environmental conditions, live and dead fine root traits, soil chemistry, and soil respiration along a 75 m transect from interior forest to meadow in Gaithersburg, MD. Results We observed differences in the soil chemical, biological and hydrological environment between the forest interior, edge and adjacent meadow. In some cases, the forest edge represented a mid-point in environmental or belowground characteristics between the forest interior and meadow ( e.g. , pH, C-to-N ratio [C:N], live fine root biomass, heterotrophic respiration), likely reflecting the change in litter type and quality associated with the transition from grass to woody species. In other cases, neighboring landscape positions were different from the forest edge, which was drier and had higher dead fine root biomass. Although soil C contents were not significantly different across landscape positions, there was a tendency towards higher average soil C content at the edge relative to other landscape positions, suggesting that increased C loss related to root decay and greater soil respiration at the edge relative to the forest interior may have been offset by increased C gain from high plant productivity and subsequent inputs to soil. Conclusions This research provides insight into how forest edge environments may differ from the interior and how concurrent processes above- and belowground may contribute to those differences.

54 ENVIRONMENTAL SCIENCES↗

A temporal analysis and response to nitrate availability of 3D root system architecture in diverse pennycress (Thlaspi arvense L.) accessions

Introduction Roots have a central role in plant resource capture and are the interface between the plant and the soil that affect multiple ecosystem processes. Field pennycress ( Thlaspi arvense L.) is a diploid annual cover crop species that has potential utility for reducing soil erosion and nutrient losses; and has rich seeds (30-35% oil) amenable to biofuel production and as a protein animal feed. The objective of this research was to (1) precisely characterize root system architecture and development, (2) understand plastic responses of pennycress roots to nitrate nutrition, (3) and determine genotypic variance available in root development and nitrate plasticity. Methods Using a root imaging and analysis pipeline, the 4D architecture of the pennycress root system was characterized under four nitrate regimes, ranging from zero to high nitrate concentrations. These measurements were taken at four time points (days 5, 9, 13, and 17 after sowing). Results Significant nitrate condition response and genotype interactions were identified for many root traits, with the greatest impact observed on lateral root traits. In trace nitrate conditions, a greater lateral root count, length, density, and a steeper lateral root angle was observed compared to high nitrate conditions. Additionally, genotype-by-nitrate condition interaction was observed for root width, width:depth ratio, mean lateral root length, and lateral root density. Discussion These findings illustrate root trait variance among pennycress accessions. These traits could serve as targets for breeding programs aimed at developing improved cover crops that are responsive to nitrate, leading to enhanced productivity, resilience, and ecosystem service.

59 BASIC BIOLOGICAL SCIENCES↗

LieART 2.0 – A Mathematica application for Lie Algebras and Representation Theory

In this paper, we present LieART 2.0 which contains substantial extensions to the Mathematica application LieART (Lie Algebras and Representation Theory) for computations frequently encountered in Lie algebras and representation theory, such as tensor product decomposition and subalgebra branching of irreducible representations. The basic procedure is unchanged—it computes root systems of Lie algebras, weight systems and several other properties of irreducible representations, but new features and procedures have been included to allow the extensions to be seamless. The new version of LieART continues to be user friendly. New extended tables of properties, tensor products and branching rules of irreducible representations are included in the supplementary material for use without Mathematica software. LieART 2.0 now includes the branching rules to special subalgebras for all classical and exceptional Lie algebras up to and including rank 15.

97 MATHEMATICS AND COMPUTING↗

Peatland warming strongly increases fine-root growth

Belowground climate change responses remain a key unknown in the Earth system. Plant fine-root response is especially important to understand because fine roots respond quickly to environmental change, are responsible for nutrient and water uptake, and influence carbon cycling. However, fine-root responses to climate change are poorly constrained, especially in northern peatlands, which contain up to two-thirds of the world’s soil carbon. We present fine-root responses to warming between +2 °C and 9 °C above ambient conditions in a whole-ecosystem peatland experiment. Warming strongly increased fine-root growth by over an order of magnitude in the warmest treatment, with stronger responses in shrubs than in trees or graminoids. In the first year of treatment, the control (+0 °C) shrub fine-root growth of 0.9 km m -2 y -1 increased linearly by 1.2 km m -2 y -1 (130%) for every degree increase in soil temperature. An extended belowground growing season accounted for 20% of this dramatic increase. In the second growing season of treatment, the shrub warming response rate increased to 2.54 km m -2 °C -1 . Soil moisture was negatively correlated with fine-root growth, highlighting that drying of these typically water-saturated ecosystems can fuel a surprising burst in shrub belowground productivity, one possible mechanism explaining the “shrubification” of northern peatlands in response to global change. This previously unrecognized mechanism sheds light on how peatland fine-root response to warming and drying could be strong and rapid, with consequences for the belowground growing season duration, microtopography, vegetation composition, and ultimately, carbon function of these globally relevant carbon sinks.

54 ENVIRONMENTAL SCIENCES↗

Optimizing Selection Pressures and Pest Management to Maximize Cultivation Yield (OSPREY) (Final Technical Report)

This project was proposed in response to AOI 1, Cultivation Intensification Processes for Algae, within the FY19 Bioenergy Technologies Office Multi-Topic Funding Opportunity Announcement (FOA Number: DE-FOA-0002029). The work was designed to address a critical industry need to improve annualized productivity, stability, and quality of algal production strains for biofuels and bioproducts. The overall project goals were to generate process innovations rooted in established outdoor systems for strain selection, improvement, maintenance, and cultivation as well as pest detection and tracking. Planned advances included a 50% improvement in harvest yield based on AFDW (g m 2 d -1 ), 50% improvement in robustness based on stability metrics (e.g., high-productivity cultivation days, pond uptime), and 20% improvement in conversion yield. Individually, each of our planned process improvements (e.g., pest tracking) had the potential to increase productivity. However, to realize increases in yield at the system level, improvements to one unit’s process must be balanced against potential effects on other processes. For example, changes to strains, cultivation, and pest management developed in isolation may hurt other unit operations. Therefore, a critical success factor of the project was the integration of the pipeline components, achieved through iterative field-to- (short term) lab testing. In addition, through sustainability models, we evaluated how improvements would alter industry scenarios.

09 BIOMASS FUELS↗

An Operational Product for Peatland Applications: The Version 7 of the SMAP Level-4 Soil Moisture Data Assimilation Product

The NASA Soil Moisture Active Passive (SMAP) mission Level-4 Soil Moisture (L4_SM) product provides global, 9-km resolution, 3-hourly surface (0-5 cm) and root-zone (0-100 cm) soil moisture estimates from April 2015 to present with a mean latency of 2.5 days from the time of observation. The L4_SM estimates are derived from the assimilation of SMAP L-band (1.4 GHz) brightness temperature (Tb) observations into the NASA Catchment Land Surface Model (CLSM). The recently released Version 7 of the L4_SM product comprises a key advancement that is of interest for peatland applications. CLSM now includes the recently developed PEATCLSM hydrology module for peatlands and uses an updated global peatland distribution. In this presentation, we first give an overview of the operational product for the peatland community. We further show how the incorporation of PEATCLSM considerably improves the dynamics of water table depth, surface soil moisture and evapotranspiration in L4_SM Version 7 over Version 6 when evaluated against in situ measurements in peatlands. These improvements are also manifested in smaller Tb observation-minus-forecast residuals. Eventually, we provide three research examples in which the data assimilation product is used to gain insights into: peatland hydrological processes, the peat moisture dependency of the carbon cycle, and wildfire occurrence in peatlands.

Michel Bechtold↗

Grass(stage)root movement to ensure future resilience of longleaf pine ecosystems

Recent interest in restoring longleaf pine ecosystems highlights the need for an improved understanding, appreciation, and consideration of longleaf pine’s unique life history compared to other southern pines. Longleaf pine ecosystems are considered more resilient than other southern pine ecosystems and the attributes that confer this resilience may be related to belowground carbon allocation patterns that occur during the seedling stage of its life history where it exists for years in a grass stage. The long residence time spent in the grass stage has impeded adoption of longleaf pine by landowners for decades, which has resulted in efforts to expedite emergence from the grass stage through silviculture, nursery production, and selection breeding techniques; however, expedited emergence may come at the expense of root and belowground carbohydrate storage reserve development —traits that purportedly enhance longleaf pine tree and ecosystem resilience relative to other southern pine species. Furthermore, I caution that efforts to expedite longleaf pine emergence from the grass stage also consider the potential implications on belowground carbon allocation and identify research priorities to help facilitate the improvement of longleaf pine seedling silviculture, nursery production, and breeding in a way that ensures the maintenance of attributes linked to resilience.

54 ENVIRONMENTAL SCIENCES↗

Evaluating the Utility of Remotely-Sensed Soil Moisture Retrievals for Operational Agricultural Drought Monitoring

Soil moisture is a fundamental data source used by the United States Department of Agriculture (USDA) International Production Assessment Division (IPAD) to monitor crop growth stage and condition and subsequently, globally forecast agricultural yields. Currently, the USDA IPAD estimates surface and root-zone soil moisture using a two-layer modified Palmer soil moisture model forced by global precipitation and temperature measurements. However, this approach suffers from well-known errors arising from uncertainty in model forcing data and highly simplified model physics. Here we attempt to correct for these errors by designing and applying an Ensemble Kalman filter (EnKF) data assimilation system to integrate surface soil moisture retrievals from the NASA Advanced Microwave Scanning Radiometer (AMSR-E) into the USDA modified Palmer soil moisture model. An assessment of soil moisture analysis products produced from this assimilation has been completed for a five-year (2002 to 2007) period over the North American continent between 23degN - 50degN and 128degW - 65degW. In particular, a data denial experimental approach is utilized to isolate the added utility of integrating remotely-sensed soil moisture by comparing EnKF soil moisture results obtained using (relatively) low-quality precipitation products obtained from real-time satellite imagery to baseline Palmer model runs forced with higher quality rainfall. An analysis of root-zone anomalies for each model simulation suggests that the assimilation of AMSR-E surface soil moisture retrievals can add significant value to USDA root-zone predictions derived from real-time satellite precipitation products.

Bolten, John D.↗

Development of guayule (parthenium argentatum)

The cytokinin benzylaminopurine strongly stimulated shoot growth, and the number of regenerated buds on the inoculum was proportional to its concentration. These buds produced shoots several centimeters in length which were caused to root on medium containing indolebutyric acid. Transferred to the septic condition of soil, the plantlets were gradually brought into full sunlight where they showed a brief vegetative growth with production of mature type leaves, and flowered. In contrast, seedlings of the same age remained vegetative. Chromosome studies of root smears from the tissue cultured plantlets showed that 2n = 36, the normal number for sexually reproducing guayules.

Ball, E. A.↗