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At least 307 records · Page 17

Continuous Test and Transition Infrastructure for Quantum Networking for Science Complex

We propose a network architecture with a separate quantum dataplane and a conventional control plane: (a) Quantum Data Plane: The Quantum Data plane consists of links of dark fibers connecting quantum switches and repeaters, which in turn, connect to quantum computers, memory and sensors. Since the current reach is limited to local areas, it will begin as a collection of site networks at laboratories, (b) Conventional Control Plane: The Control plane provides management access to quantum devices for configuration and provisioning via control nodes with firewall and encryption capabilities. Continuous Test and Transition Infrastructure: We propose an infrastructure with a control plane connecting multiple sites via encrypted tunnels over conventional networks consisting of the following: (a) Site Quantum Networks: Individual site networks supported by their fiber plants connect laboratories that house and connect to their quantum devices for testing and interoperability.(b) Site Control Planes: Sites are connected over individual control planes with control hosts with Software Defined Networking capabilities, which can be peered with other networks via ESnet.(c) Progressive Expansion: Initially, sites will develop individual data planes with their specific quantum devices and fiber connections, and mechanisms to interface with conventional networks. They progressively expand and interconnect, under a wide-area ecosystem of peered control planes for device testing, interoperability development and roll off into production environments.

Rao, Nageswara S.↗

Multi-omics data resource: Data package 24 (Pck024)

The data package consists of isolated pancreatic islets from 3 human donors treated with IL-1β, IFNγ or IL-1β + IFNγ for 6 h and IL-1β, IFNγ, IL-1β + IFNγ, IL-1β + IFNγ + NMMA or NMMA for 18 h and submitted for scRNA-seq. This study examines cytokine-stimulated changes in gene expression in human islets using single-cell RNA sequencing. Data contributors: Jennifer S Stancill & John A Corbett: Department of Biochemistry, Medical College of Wisconsin, Milwaukee, WI, USA Data repository: GSE251730 Publication: 10.1093/function/zqae015

Sarkar, Soumyadeep [Pacific Northwest National Lab↗

Lead isotopic compositions of airborne particulates collected from snow and from dry deposition in the East River Watershed, Colorado and at the Southern Sierra Critical Zone Observatory, California

The data set consists of lead (Pb) isotopic ratios (206Pb/207Pb and 208Pb/207Pb, as well as 206Pb/204Pb, 207Pb/204Pb, 208Pb/204Pb) for particulate samples collected from snow and dry deposition. This was part of a study (O’Day et al. 2020) that was looking at the speciation of phosphorous in splits of these samples to evaluate the flux and bio-availability of phosphorous to the mountain sites in the study. The Pb isotopic data allow sourcing of long-range transported Pb, specifically the fraction of Pb sourced in Asia, and so a comparison of the relative distances of PM sources between the high and low elevation sites. Samples were collected at the East River Watershed, CO (dry deposition collected over Sept.-Oct. 2016, show sampling winter 2017) and at the Southern Sierra Critical Zone Observatory (dry deposition collected over Sept-Nov 2016, July-Sept 2017, June-July 2017). The data includes Pb concentration data, as well as calculated fraction of the Pb sourced in Asia. This data set was published in part in O’Day et al. (2020) Phosphorus Speciation in Atmospherically Deposited Particulate Matter and Implications for Terrestrial Ecosystem Productivity. ES&T, https://dx.doi.org/10.1021/acs.est.9b06150

54 ENVIRONMENTAL SCIENCES↗

The S-PLUS Fornax Project (S+FP): A first 12-band glimpse of the Fornax galaxy cluster

ABSTRACT The Fornax galaxy cluster is the richest nearby (D ∼ 20 Mpc) galaxy association in the southern sky. As such, it provides a wealth of opportunities to elucidate on the processes where environment holds a key role in transforming galaxies. Although it has been the focus of many studies, Fornax has never been explored with contiguous homogeneous wide-field imaging in 12 photometric narrow and broad bands like those provided by the Southern Photometric Local Universe Survey (S-PLUS). In this paper, we present the S-PLUS Fornax Project (S+FP) that aims to comprehensively analyse the galaxy content of the Fornax cluster using S-PLUS. Our data set consists of 106 S-PLUS wide-field frames (FoV∼1.4 × 1.4 deg2) observed in five Sloan Digital Sky Survey-like ugriz broad bands and seven narrow bands covering specific spectroscopic features like [O ii], Ca ii H+K, Hδ, G band, Mg b triplet, Hα, and the Ca ii triplet. Based on S-PLUS specific automated photometry, aimed at correctly detecting Fornax galaxies and globular clusters in S-PLUS images, our data set provides the community with catalogues containing homogeneous 12-band photometry for ∼3 × 106 resolved and unresolved objects within a region extending over ∼208 deg2 (∼5 Rvir in RA) around Fornax’ central galaxy, NGC 1399. We further explore the eagle and IllustrisTNG cosmological simulations to identify 45 Fornax-like clusters and generate mock images on all 12 S-PLUS bands of these structures down to galaxies with M⋆ ≥ 108 M⊙. The S+FP data set we put forward in this first paper of a series will enable a variety of studies some of which are briefly presented.

Astronomy & Astrophysics↗

Toward Drilling the Perfect Geothermal Well: An International Research Coordination Network for Geothermal Drilling Optimization Supported by Deep Machine Learning and Cloud Based Data Aggregation

The EDGE project, supported by the U.S. Department of Energy Geothermal Technologies Office under award DE-EE0008793, established a data-driven framework for improving the efficiency, cost-effectiveness, and reliability of geothermal well drilling. The project focused on developing scalable data infrastructure, advanced machine learning and probabilistic models, and integrated analytics tools to support continuous drilling optimization. A central objective was to reduce geothermal drilling costs by up to seventy percent while minimizing the risk of well failure through predictive diagnostics and adaptive planning. Over the project period, a comprehensive data repository was designed and deployed, incorporating records from over one hundred geothermal wells across varied geological settings. This repository supported both structured and unstructured data and adhered to FAIR data principles, enabling provenance tracking, quality control, and standardized metadata. The project introduced automated ingestion pipelines and a cloud-hosted platform that facilitated access to raw, processed, and derived datasets. This infrastructure served as the foundation for model development and analysis. Machine learning workflows were developed to predict key drilling metrics including rate of penetration, non-productive time, and total drilling costs. Self-organizing maps and dimensionality reduction methods were used to uncover operational patterns and outliers, while supervised learning algorithms such as random forests and deep neural networks were applied to forecast performance outcomes. The models were validated on heterogeneous datasets from both U.S. and Icelandic fields, demonstrating variable but significant predictive accuracy. The results indicated that finer temporal resolution, inclusion of lithological data, and consistency in operational annotations could substantially improve model performance. The project also implemented process mining techniques to reconstruct state-transition models from drilling event logs. These models enabled the identification of deviations from optimal workflows and provided insights into recurring failure modes. Analysis of non-productive time highlighted the impact of equipment failures, geological challenges, and human factors, offering opportunities for targeted mitigation strategies. The EDGE Dashboard was developed as a web-based expert system integrating data visualization, model outputs, and user-driven queries. It provided an accessible interface for operators to explore historical data, evaluate predicted outcomes, and compare drilling scenarios. Initial feedback from project partners suggested that the dashboard could serve as a foundation for more advanced advisory and optimization tools. Overall, the EDGE project demonstrated the feasibility and value of applying modern data science techniques to geothermal drilling. It delivered a set of interoperable tools and models that can support more efficient, lower-risk well development. The findings point toward a viable path for transitioning from advisory analytics to semi-autonomous drilling systems, contingent on continued collaboration, expanded datasets, and field validation. The project results have immediate relevance for drilling operations, data management practices, and future geothermal R&D efforts aimed at achieving reliable, cost-competitive geothermal energy at scale.

15 GEOTHERMAL ENERGY↗

SPRUCE Ground Observations of Phenology in Experimental Plots, 2020

This data set consists of one comma separated (*.csv) file containing phenological transition dates, as derived from direct observations of vegetative and reproductive phenology recorded by a human observer, from the SPRUCE experiment during 2020, the fifth full year of whole-ecosystem warming (Hanson et al. 2017). Both spring and autumn phenological events are included. Since April 2016, human observers have been directly tracking the phenology of both woody and herbaceous species on a weekly schedule within the SPRUCE experimental chambers, these data are reported in annual ground observations data sets (see Related Data Sets). The observed date reported here is the first survey date in 2020 on which an event/phenophase was definitively observed. This data set also contains a companion file in HTML (*.html) format containing figures showing the relationship between the day of year and temperature treatment for different phenological phases by species for 2020. User note: Ground observations of phenology from 2016-2021 are available. SPRUCE Ground Observations of Phenology in Experimental Plots 2021, https://doi.org/10.25581/spruce.099/1874936 for the most recent data as well as links to all other ground phenology datasets.

54 ENVIRONMENTAL SCIENCES↗

SPRUCE Ground Observations of Phenology in Experimental Plots, 2021

This data set consists of one comma separated (*.csv) file containing phenological transition dates, as derived from direct observations of vegetative and reproductive phenology recorded by a human observer, from the SPRUCE experiment during 2021, the sixth full year of whole-ecosystem warming (Hanson et al. 2017). Both spring and autumn phenological events are included. Since April 2016, human observers have been directly tracking the phenology of both woody and herbaceous species on a weekly schedule within the SPRUCE experimental chambers, these data are reported in annual ground observations data sets (see Related Data Sets). The observed date reported here is the first survey date in 2021 on which an event/phenophase was definitively observed. This data set also contains a companion file in HTML (*.html) format containing figures showing the relationship between the day of year and temperature treatment for different phenological phases by species for 2021. User note: Ground observations of phenology from 2016-2020 are available. See the user guide for links to all other ground phenology datasets.

54 ENVIRONMENTAL SCIENCES↗

Machine learning inversion from scattering for mechanically driven polymers

A machine learning inversion method is developed for analyzing scattering functions of mechanically driven polymers and extracting the corresponding feature parameters, which include energy parameters and conformation variables. The polymer is modeled as a chain of fixed-length bonds constrained by bending energy, and it is subject to external forces such as stretching and shear. We generate a data set consisting of random combinations of energy parameters, including bending modulus, stretching and shear force, along with Monte Carlo-calculated scattering functions and conformation variables such as end-to-end distance, radius of gyration and off-diagonal component of the gyration tensor. The effects of the energy parameters on the polymer are captured by the scattering function, and principal component analysis ensures the feasibility of the machine learning inversion. Finally, we train a Gaussian process regressor using part of the data set as a training set and validate the trained regressor for inversion using the rest of the data. The regressor successfully extracts the feature parameters.

Gaussian process regressors↗

Data and script associated with “Shifts in Rain-Snow Partitioning Drive Faster Water Transit Times in the US Pacific Northwest”

This data package contains the data and code to use and run the Water Tracer enabled version of the Weather Research and Forecasting Hydrologic model (WT-WRF-Hydro) with the Sequential Precipitation Input Tagging (SPIT) framework. It is associated with the publication “Shifts in Rain-Snow Partitioning Drive Faster Water Transit Times in the US Pacific Northwest” published in Scientific Reports (Butler et al., 2026; https://doi.org/10.1038/s41598-026-46539-1). We use the Continental U.S. (CONUSII; Rasmussen et al., 2021) dataset to force the model with an historical climate (2006–2013) and a future climate (2086–2093) with a representative carbon pathway (RCP) 8.5 scenario. We use the model to calculate water transit times in five headwater catchments within the U.S. Pacific Northwest. We also show key hydrologic and environmental variables that affect water transit times and changes in the future. Finally, we use observed data to validate the model such as stream water isotopes, snowpack characteristics, and stream discharge. For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About. In addition to a readme, this data package also includes a file-level metadata (FLMD) file that describes each file and a data dictionary (DD) that describes all column/row headers and variable definitions. The data package consists of 11 folders: (1) "Figures" contains the exported figures used in the manuscript; (2) "Model_Isotope_Date" contains the WT-WRF-Hydro isotope date used in model validation; (3) “Model_Outputs_Future” contains the WT-WRF-Hydro future climate outputs; (4) “Model_Outputs_Historical” contains the WT-WRF-Hydro historical climate outputs; (5) “Model_Outputs_Weights_Areas” contains the WT-WRF-Hydro weights per catchment used to calculate water transit times and isotopes in stream water; (6) “MODIS_data_scripts” contains data used to validate snow conditions in the study area; (7) “Observed_Flow_Data” contains the observed streamflow data used in model validation; (8) “Observed_Isotope_Data” contains the observed stream water isotope data used in model validation; (9) “Scripts” contains the Python scripts used to general results and the figures; (10) “Statistic_Outputs” contains the water transit time statistical outputs reported in this manuscript; (11) “Validation_SNOTEL” contains the SNOTEL data used in model validation. The files in this data package have the following file extensions: .tif, .txt, .csv, .pdf, .py, .jpg, and .png.

American River↗

Alpha-heating analysis of burning plasma and ignition experiments on the National Ignition Facility

A recent experiment conducted on the National Ignition Facility (NIF) described in the study by Abu-Shawareb et al. achieved a fusion yield output of 1.3 MJ from ~ 220 kJ of x-ray energy absorbed by the capsule, demonstrating remarkable progress in the field of laser driven inertial confinement fusion. In the study by A. R. Christopherson [“Effects of charged particle heating on the hydrodynamics of inertially confined plasmas,” Ph.D. thesis (2020)], the plasma conditions needed to claim the onset of ignition and burn propagation were outlined and multiple criterion were provided to assess progress in inertial fusion experiments. In this work, we modify the metrics from A. R. Christopherson to accurately calculate performance metrics for indirect-drive experiments on the NIF. We also show that performance metric trends observed in NIF data are consistent with theory and simulations. This analysis indicates that all the identified criterion for ignition and burn propagation have been exceeded by experiment 210 808.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

SPRUCE Ground Observations of Phenology in Experimental Plots, 2022

This data set consists of one comma separated (*.csv) file containing phenological transition dates, as derived from direct observations of vegetative and reproductive phenology recorded by a human observer, from the SPRUCE experiment during 2022 (2022-03-28 to 2021-11-17), the seventh full year of whole-ecosystem warming (Hanson et al. 2017). Both spring and autumn phenological events are included. Since April 2016, human observers have been directly tracking the phenology of both woody and herbaceous species on a weekly schedule within the SPRUCE experimental chambers, these data are reported in annual ground observations data sets (see Related Data Sets). The observed date reported here is the first survey date in 2022 on which an event/phenophase was definitively observed. This data set also contains a companion file in HTML (*.html) containing figures showing the relationship between the day of year and temperature treatment for different phenological phases by species for 2022.

SPRUCE experiment, plant phenological phases, Spru↗

SPRUCE Ground Observations of Phenology in Experimental Plots, 2023

This data set consists of one comma separated (*.csv) file containing phenological transition dates, as derived from direct observations of vegetative and reproductive phenology recorded by a human observer, from the SPRUCE experiment during 2023 (2023-03-30 to 2023-11-29), the eighth full year of whole-ecosystem warming (Hanson et al. 2017). Both spring and autumn phenological events are included. Since April 2016, human observers have been directly tracking the phenology of both woody and herbaceous species on a weekly schedule within the SPRUCE experimental chambers, these data are reported in annual ground observations data sets (see Related Data Sets). The observed date reported here is the first survey date in 2023 on which an event/phenophase was definitively observed. This data set also contains a companion file in HTML (*.html) containing figures showing the relationship between the day of year and temperature treatment for different phenological phases by species for 2023.

Marcell Experimental Forest↗

SPRUCE Ground Observations of Phenology in Experimental Plots, 2024

This data set consists of one comma separated (*.csv) file containing phenological transition dates, as derived from direct observations of vegetative and reproductive phenology recorded by a human observer, from the SPRUCE experiment during 2024 (2025-03-06 to 2025-11-21), the ninth full year of whole-ecosystem warming (Hanson et al. 2017). Both spring and autumn phenological events are included. Since April 2016, human observers have been directly tracking the phenology of both woody and herbaceous species on a weekly schedule within the SPRUCE experimental chambers, these data are reported in annual ground observations data sets (see Related Data Sets). The observed date reported here is the first survey date in 2024 on which an event/phenophase was definitively observed. This data set also contains a companion file in HTML (*.html) containing figures showing the relationship between the day of year and temperature treatment for different phenological phases by species for 2024.

54 ENVIRONMENTAL SCIENCES↗

A Critical Review of High Burnup Fuel Fragmentation, Relocation, and Dispersal under Loss-Of-Coolant Accident Conditions

High burnup fuel in excess of ~6268 GWd/MTU has been observed to severely fragment when subjected to temperature transient conditions as in a loss-of-coolant accident. In the event of cladding failure, the severely fragmented fuel can relocate into the balloon region and potentially disperse through the burst opening into the reactor’s primary system. This observation has led to implementation of several independent test programs designed to focus on various aspects of fuel fragmentation, relocation, and dispersal. The purpose of this review is to perform a critical, holistic assessment of fuel fragmentation, relocation, and dispersal under loss-of-coolant conditions to identify data gaps in the experimental data base. Phenomena have been identified and well defined through the various testing programs, and general agreement regarding the governing parameters (temperature, burnup, heating rate, cladding deformation, etc.) has been established. However, there is a significant data gap connecting research to commercial application. Furthermore, previous research attempted to evaluate the problem holistically, but has yet to provide a comprehensive understanding of the problem. Major identified data gaps consist of (1) a comprehensive understanding of pretransient fuel rod conditions (fuel temperature, fuel stress, rod internal pressures, microstructure, etc.), (2) definition of prototypic loss-of-coolant accident conditions (heating rate, fuel temperatures, fuel stress), (3) identification of the differences between nuclear and electrical integral loss-of-coolant accident tests, and connection of fuel rod performance (cladding ballooning, burst opening, potential relocation, fragmentation susceptibility, etc.) to fuel fragmentation, relocation, and dispersal severity. Finally, the content of this manuscript provides a clear path for connecting testing and data acquisition to commercial application by providing concrete means for filling data gaps and prioritized testing regimes.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

A Review of the Resuspension of Radioactively Contaminated Particles by Vehicle and Pedestrian Traffic—Current Theory, Practice, Gaps, and Needs

Here, the resuspension of radioactively contaminated particles in a built environment, such as from urban surfaces like foliage, building exteriors, and roadways, is described empirically by current plume and dosimetry models used for hazard assessment and long-term risk purposes. When applying these models to radiological contamination emergencies affecting urban areas, the accuracy of the results for recent contamination deposition is impacted in two main ways. First, the data supporting the underlying resuspension equations was acquired for open, quiescent conditions with no vehicle traffic or human activities, so it is not necessarily representative of the urban environment. Second, mechanical disturbance by winds in urban canyons and during emergency operations caused by vehicle traffic and human activities are not directly considered by the equations. Accordingly, plume and dosimetry models allow the user to input certain compensating values, but the models do not necessarily supply users instructions on what values to use. This manuscript reviews the available literature to comprehensively and consistently pool data for resuspension due to mechanically induced resuspension applicable to urban contamination. Because there are few studies that directly measured radioactive resuspension due to vehicles and pedestrians, this review novelly draws on a range of other studies involving non-radioactive particles, ranging from outdoor air pollution emissions to indoor allergen transport. The results lead to tabulated, recommended values for specific conditions in the emergency phase to help users of plume and dosimetry models maintain the conservativeness needed to properly capture the potential radiation dose posed by mechanically induced resuspension. These values are of benefit to model users until better data are available. The results also suggest the types of data that may result in improved plume and dose modeling.

61 RADIATION PROTECTION AND DOSIMETRY↗

Photoproduction of η mesons off the proton for 1.2 < E γ < 4.7GeV using CLAS at Jefferson Laboratory

Photoproduction cross sections are reported for the reaction $\gamma p\to p\eta$ using energy-tagged photons and the CLAS spectrometer at Jefferson Laboratory. The $\eta$ mesons are detected in their dominant charged decay mode, $\eta\to \pi^+\pi^-\pi^0$, and results on differential cross sections are presented for incident photon energies between 1.2 and 4.7 GeV. These new $\eta$ photoproduction data are consistent with earlier CLAS results but extend the energy range beyond the nucleon resonance region into the Regge regime. The normalized angular distributions are also compared with the experimental results from several other experiments, and with predictions of $\eta$ MAID\,2018 and the latest solution of the Bonn-Gatchina coupled-channel analysis. Differential cross sections $d\sigma/dt$ are presented for incident photon energies $E_\gamma > 2.9$ GeV ($W > 2.5$ GeV), and compared with predictions which are based on Regge trajectories exchange in the $t$-channel (Regge models). Overall, the data confirm the expected dominance of $\rho$, $\omega$ vector-meson exchange in an analysis by the Joint Physics Analysis Center.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Phase Identification in Synchrotron X-ray Diffraction Patterns of Ti–6Al–4V Using Computer Vision and Deep Learning

X-ray diffraction patterns contain information about the atomistic structure and microstructure (defect population) of materials, extracting detailed information from diffraction patterns is complex, demanding and relies on prior knowledge. Here, we hypothesize that deep-learning techniques can help to perform an effective and accurate analysis with high throughput rates. To demonstrate this concept, we applied a novel deep learning framework to determine the evolution of the β-phase volume fraction in a Ti–6Al–4V alloy during heat-treatment from video sequences of 2D diffraction patterns recorded in transmission and with highly monochromatic radiation in a synchrotron beamline. In particular, we studied the impact of network design on prediction reliability and computational performance. Networks of different architectures were trained using 3008 experimental 2D patterns. A well-tuned model was found to reproduce the phase fractions of another experimental data set, consisting of 1100 diffraction patterns, with a mean-square error as small as 2.6 x 10 -4 . The average prediction error of β-phase volume fraction was within 1.6 x 10 -2 (in each diffraction pattern) of the values obtained by conventional methods. Our work demonstrates that convolutional neural networks can evaluate high energy X-ray diffraction patterns with a remarkable level of reliability. Furthermore, it demonstrates the significance of network design on the reliability of predictions and computational performance. The most complex models do not necessarily result in highest accuracy and may even fail to learn from the data.

36 MATERIALS SCIENCE↗

JGI Plant Gene Atlas: an updateable transcriptome resource to improve functional gene descriptions across the plant kingdom

Abstract Gene functional descriptions offer a crucial line of evidence for candidate genes underlying trait variation. Conversely, plant responses to environmental cues represent important resources to decipher gene function and subsequently provide molecular targets for plant improvement through gene editing. However, biological roles of large proportions of genes across the plant phylogeny are poorly annotated. Here we describe the Joint Genome Institute (JGI) Plant Gene Atlas, an updateable data resource consisting of transcript abundance assays spanning 18 diverse species. To integrate across these diverse genotypes, we analyzed expression profiles, built gene clusters that exhibited tissue/condition specific expression, and tested for transcriptional response to environmental queues. We discovered extensive phylogenetically constrained and condition-specific expression profiles for genes without any previously documented functional annotation. Such conserved expression patterns and tightly co-expressed gene clusters let us assign expression derived additional biological information to 64 495 genes with otherwise unknown functions. The ever-expanding Gene Atlas resource is available at JGI Plant Gene Atlas (https://plantgeneatlas.jgi.doe.gov) and Phytozome (https://phytozome.jgi.doe.gov/), providing bulk access to data and user-specified queries of gene sets. Combined, these web interfaces let users access differentially expressed genes, track orthologs across the Gene Atlas plants, graphically represent co-expressed genes, and visualize gene ontology and pathway enrichments.

59 BASIC BIOLOGICAL SCIENCES↗