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At least 307 records · Page 17
All sourcesNASA NTRSDOE OSTI
NASA NTRS2007

DNA Recombinase Proteins, their Function and Structure in the Active Form, a Computational Study

Homologous recombination is a crucial sequence of reactions in all cells for the repair of double strand DNA (dsDNA) breaks. While it was traditionally considered as a means for generating genetic diversity, it is now known to be essential for restart of collapsed replication forks that have met a lesion on the DNA template (Cox et al., 2000). The central stage of this process requires the presence of the DNA recombinase protein, RecA in bacteria, RadA in archaea, or Rad51 in eukaryotes, which leads to an ATP-mediated DNA strand-exchange process. Despite many years of intense study, some aspects of the biochemical mechanism, and structure of the active form of recombinase proteins are not well understood. Our theoretical study is an attempt to shed light on the main structural and mechanistic issues encountered on the RecA of the e-coli, the RecA of the extremely radio resistant Deinococcus Radiodurans (promoting an inverse DNA strand-exchange repair), and the homolog human Rad51. The conformational changes are analyzed for the naked enzymes, and when they are linked to ATP and ADP. The average structures are determined over 2ns time scale of Langevian dynamics using a collision frequency of 1.0 ps(sup -1). The systems are inserted in an octahedron periodic box with a 10 Angstrom buffer of water molecules explicitly described by the TIP3P model. The corresponding binding free energies are calculated in an implicit solvent using the Poisson-Boltzmann solvent accessible surface area, MM-PBSA model. The role of the ATP is not only in stabilizing the interaction RecA-DNA, but its hydrolysis is required to allow the DNA strand-exchange to proceed. Furthermore, we extended our study, using the hybrid QM/MM method, on the mechanism of this chemical process. All the calculations were performed using the commercial code Amber 9.

Carra, Claudio↗
NASA NTRS2004

Electron Spin Dephasing and Decoherence by Interaction with Nuclear Spins in Self-Assembled Quantum Dots

Electron spin dephasing and decoherence by its interaction with nuclear spins in self-assembled quantum dots are investigated in the framework of the empirical tight-binding model. Electron spin dephasing in an ensemble of dots is induced by the inhomogeneous precession frequencies of the electron among dots, while electron spin decoherence in a single dot arises from the inhomogeneous precession frequencies of nuclear spins in the dot. For In(x)Ga(1-x) As self-assembled dots containing ~30000 nuclei, the dephasing and decoherence times are predicted to be on the order of 100 ps and 1 (micro)s.

ensemble dephasing↗
NASA NTRS2005

An LO Phase Link Using a Commercial Geo-Stationary Satellite

This viewgraph presentation reviews an experiment to determine feasibility of achieving 1 ps level time transfer using a satellite link and make use of inexpensive Ku band transmit/receive equipment. It reviews the advantages of Two Way Satellite Time Transfer using a commercial Geo-Stationary Satellite: (1) Commercial satellites are available (2) Significant cost reduction when compared to Hydrogen Masers and (3) Large footprint- entire US (including Hawaii) with just one satellite.

two way time transfer↗
NASA NTRS2007

Doubly Excited Resonances in the Positronium Negative Ion

The recent theoretical studies on the doubly excited states of the Ps' ion are described. The results obtained by using the method of complex coordinate rotation show that the three-lepton system behaves very much like an XYX tri-atomic molecule. Furthermore, the recent investigation on the positronium negative ion embedded in Debye plasma environments is discussed. The problem is modeled by the use of a screened Coulomb potential to represent the interaction between the charge particles.

Ho, Y.K.↗
NASA NTRS2008

Structural Maps of the V-17 Beta Regio Quadrangle, Venus

These represent slices of the geologic map into 7 time-stratigraphic levels whose descriptions are found in [3-6]. From older to younger they are: 1) Tessera material unit (t), 2) Densely fractured plains material unit (pdf), 3) Fractured and ridged plains material unit (pfr), 4) Tessera transitional terrain structural unit (tt), 5) Fracture belts structural unit (fb), 6) Shield plains (psh) and plains with wrinkle ridges (pwr) material units combined, and 7) Lobate (pl) and smooth (ps) plains material units combined and, approximately contemporaneous with them, the structural unit of rifted terrain (rt). Each slice shows the generalized pattern of structures typical of these units. Figures 1-7 show the seven maps and Figure 8 shows the combined map illustrating what is shown in the seven maps. To visualize the Beta Regio uplift outlines, the major structure of this area, we show the +0.5 km and +2.5 km contour lines, corresponding respectively to the base and the mid-height of the uplift. It is seen in Figures 1-2 and 4 the trends of t, pdf and tt occupy relatively small areas and their structures seen in these small windows appear rather variable and with almost no orientation heritage with time. Figure 3 shows that swarms of ridge belts trend mostly NW and go through the Beta structure with no alignment with it, suggesting that this structure did not yet exist at this time. Figure 5 shows that fracture belts align along the northern base of the Beta uplift suggesting onset of the formation of this structure. Figure 6 shows that wrinkle ridges do not show alignment with the Beta uplift suggesting that this already forming structure was not high enough to exert topographic stress in its vicinity. Figure 7 shows that the Beta uplift has Devana Chasma as an axial rift zone, suggesting a genetic link between the uplift and rifting. Figure 8 shows that structural trends in this area significantly changed with time.

Basilevsky, A. t.↗
NASA NTRS2010

Post-Correlation Processing for the VLBI2010 Proof-of-Concept System

For the past three years, the MIT Haystack Observatory and the broadband team have been developing a proof-of-concept broadband geodetic VLBI microwave (2-12 GHz) receiver. Also on-going at Haystack is the development of post-correlation processing needed to extract the geodetic observables. Using this processing, the first fully-phase-calibrated geodetic fringes have been produced from observations conducted with the proof-of-concept system. The results we present show that the phase-calibrated phase residuals from four 512 MHz bands spanning 2 GHz have an RMS phase variation of 8deg which corresponds to a delay uncertainty of 12 ps.

Beaudoin, Christopher↗
NASA NTRS2007

Temperature Dependent E2 Raman Modes in the ZnCoO Ternary Alloy

The anharmonic properties of low and high frequency E2 modes of ZnO and Co doped ZnO were investigated using Raman scattering spectroscopy. We have determined the behavior of frequency, linewidths, and lifetime of E2 modes in the temperature range from 80 to 800 K. In the case of E2(high) mode the frequency shift towards the lower energy side was analyzed in light of the theory of anharmonic phonon-phonon interaction and thermal expansion of the lattice, and the linewidth behavior was analyzed in terms of anharmonic effect of three-phonon decay mechanism. But in the case of E2(low), the linewidth and frequency behaved practically harmonic with respect to temperature and independent of Co substitutions. It is found that the E2(high) phonon anharmonicity is higher for ZnCoO alloys than in pure ZnO and it increases with the compositional disorder. The low temperature lifetime of E2 phonon in ZnO, 1 % and 3% Co doped ZnO were found to be 1.S2, 1.74, and 1.54 ps, respectively.

Samanta, K.↗
NASA NTRS2011

Step-by-Step Simulation of Radiation Chemistry Using Green Functions for Diffusion-Influenced Reactions

Radiolytic species are formed approximately 1 ps after the passage of ionizing radiation through matter. After their formation, they diffuse and chemically react with other radiolytic species and neighboring biological molecules, leading to various oxidative damage. Therefore, the simulation of radiation chemistry is of considerable importance to understand how radiolytic species damage biological molecules [1]. The step-by-step simulation of chemical reactions is difficult, because the radiolytic species are distributed non-homogeneously in the medium. Consequently, computational approaches based on Green functions for diffusion-influenced reactions should be used [2]. Recently, Green functions for more complex type of reactions have been published [3-4]. We have developed exact random variate generators of these Green functions [5], which will allow us to use them in radiation chemistry codes. Moreover, simulating chemistry using the Green functions is which is computationally very demanding, because the probabilities of reactions between each pair of particles should be evaluated at each timestep [2]. This kind of problem is well adapted for General Purpose Graphic Processing Units (GPGPU), which can handle a large number of similar calculations simultaneously. These new developments will allow us to include more complex reactions in chemistry codes, and to improve the calculation time. This code should be of importance to link radiation track structure simulations and DNA damage models.

Plante, Ianik↗
NASA NTRS2004

Time-Transfer System for Two Orbiting Spacecraft

A report describes the time-transfer system of the Gravity Recovery and Climate Experiment (GRACE), in which information on the distribution of Earth mass is extracted from position and time measurements for two spacecraft about 200 km apart in a circular, nearly polar orbit. Each spacecraft carriers a Global Positioning System (GPS) receiver, a K/Ka-band ranging (KBR) instrument, and an ultra-stable oscillator (USO) that serves as a clock for the GPS and KBR units. The long-term errors of the USOs are cancelled by use of a technique, called dual-one-way phase measurements, in which the phases of the KBR signals from spacecraft A as measured at spacecraft B are added to the phases of the KBR signals from spacecraft B as measured at spacecraft A. GPS data are used to synchronize time between the USOs to within approximately 150 ps as needed to enable the dual-one-way phase measurements: For each spacecraft, the GPS data are used to solve for orbital positions, and the difference between the onboard clocks and a ground clock every 5 minutes. The relative clock rate between the spacecraft is then determined from the difference between the two solutions.

Bertiger, William↗
NASA NTRS2011

Imaging X-Ray Polarimeter for Solar Flares (IXPS)

We describe the design of a balloon-borne Imaging X-ray Polarimeter for Solar flares (IX PS). This novel instrument, a Time Projection Chamber (TPC) for photoelectric polarimetry, will be capable of measuring polarization at the few percent level in the 20-50 keV energy range during an M- or X class flare, and will provide imaging information at the approx.10 arcsec level. The primary objective of such observations is to determine the directivity of nonthermal high-energy electrons producing solar hard X-rays, and hence to learn about the particle acceleration and energy release processes in solar flares. Secondary objectives include the separation of the thermal and nonthermal components of the flare X-ray emissions and the separation of photospheric albedo fluxes from direct emissions.

Hosack, Michael↗
NASA NTRS2011

Challenges at Petascale for Pseudo-Spectral Methods on Spheres (A Last Hurrah?)

Conclusions: a) Proper software abstractions should enable rapid-exploration of platform-specific optimizations/ tradeoffs. b) Pseudo-spectra! methods are marginally viable for at least some classes of petascaie problems. i.e., GPU based machine with good bisection would be best. c) Scalability at exascale is possible, but the necessary resolution will make algorithm prohibitively expensive. Efficient implementations of realistic global transposes are mtricate and tedious in MPI. PS at petascaie requires exploration of a variety of strategies for spreading local and remote communic3tions. PGAS allows far simpler implementation and thus rapid exploration of variants.

Clune, Thomas↗
NASA NTRS2012

Wide Range SET Pulse Measurement

A method for measuring a wide range of SET pulses is demonstrated. Use of dynamic logic, faster than ordinary CMOS, allows capture of short pulses. A weighted binning of SET lengths allows measurement of a wide range of pulse lengths with compact circuitry. A pulse-length-conservative pulse combiner tree routes SETs from combinational logic to the measurement circuit, allowing SET measurements in circuits that cannot easily be arranged in long chains. The method is applied to add-multiplex combinational logic, and to an array of NFET routing switches, at .35 micron. Pulses are captured in a chain of Domino Logic AND gates. Propagation through the chain is frozen on the trailing edge by dropping low the second "enable" input to the AND gates. Capacitive loading is increased in the latter stages to create an approximately logarithmic weighted binning, so that a broad range of pulse lengths can be captured with a 10 stage capture chain. Simulations show pulses can be captured which are 1/5th the length of those typically captured with leading edge triggered latch methods, and less than the length of those captured with a trailing edge latch method. After capture, the pulse pattern is transferred to an SEU protected shift register for readout. 64 instances of each of two types of logic are used as targets. One is a full adder with a 4 to 1 mux on its inputs. The other is a 4 x 4 NFET routing matrix. The outputs are passed through buffered XNOR comparators to identify pulses, which are merged in a buffered not-nand (OR) tree designed to avoid pulse absorption as much as possible. The output from each of the two test circuits are input into separate pulse measurement circuits. Test inputs were provided so that the circuit could be bench tested and calibrated. A third SET measurement circuit with no inputs was used to judge the contribution from direct hits on the measurement circuit. Heavy ions were used with an LET range from 12 to 176. At LET of 21 and below, the very small number of SETs were not significantly higher in the test over the control circuits. At higher LET the test circuit SETs are one or two orders of magnitude greater than for the control circuit. The NFET circuit produces more and slightly longer SETs as expected. But the differences do not appear to be significant enough to modify strategies now used to avoid capture of SETs in chips such as FPGAs. Complete data and graphs will be in the full paper / presentation. In the summary figure below left, NOCL is the reference circuit without any input, and number of stages triggered is plotted. Simulation at right shows the smallest pulse captured (stage 2) at about 300 ps. Our conclusion is that the method is promising, but that improvements in the merge network are desirable before applying in a deep submicron process

Shuler, Robert L.↗
NASA NTRS2012

Further Examination of a Simplified Model for Positronium-Helium Scattering

While carrying out investigations on Ps-He scattering we realized that it would be possible to improve the results of a previous work on zero-energy scattering of ortho-positronium by helium atoms. The previous work used a model to account for exchange and also attempted to include the effect of short-range Coulomb interactions in the close-coupling approximation. The 3 terms that were then included did not produce a well-converged result but served to give some justification to the model. Now we improve the calculation by using a simple variational wave function, and derive a much better value of the scattering length. The new result is compared with other computed values, and when an approximate correction due to the van der Waals potential is included the total is consistent with an earlier conjecture.

DiRienzi, J.↗
NASA NTRS2014

Development and Performance Evaluations of HfO2-Si and Rare Earth-Si Based Environmental Barrier Bond Coat Systems for SiC/SiC Ceramic Matrix Composites

Ceramic environmental barrier coatings (EBC) and SiCSiC ceramic matrix composites (CMCs) will play a crucial role in future aircraft propulsion systems because of their ability to significantly increase engine operating temperatures, improve component durability, reduce engine weight and cooling requirements. Advanced EBC systems for SiCSiC CMC turbine and combustor hot section components are currently being developed to meet future turbine engine emission and performance goals. One of the significant material development challenges for the high temperature CMC components is to develop prime-reliant, high strength and high temperature capable environmental barrier coating bond coat systems, since the current silicon bond coat cannot meet the advanced EBC-CMC temperature and stability requirements. In this paper, advanced NASA HfO2-Si based EBC bond coat systems for SiCSiC CMC combustor and turbine airfoil applications are investigated. The coating design approach and stability requirements are specifically emphasized, with the development and implementation focusing on Plasma Sprayed (PS) and Electron Beam-Physic Vapor Deposited (EB-PVD) coating systems and the composition optimizations. High temperature properties of the HfO2-Si based bond coat systems, including the strength, fracture toughness, creep resistance, and oxidation resistance were evaluated in the temperature range of 1200 to 1500 C. Thermal gradient heat flux low cycle fatigue and furnace cyclic oxidation durability tests were also performed at temperatures up to 1500 C. The coating strength improvements, degradation and failure modes of the environmental barrier coating bond coat systems on SiCSiC CMCs tested in simulated stress-environment interactions are briefly discussed and supported by modeling. The performance enhancements of the HfO2-Si bond coat systems with rare earth element dopants and rare earth-silicon based bond coats are also highlighted. The advanced bond coat systems, when integrated with advanced EBC top coats, showed promise to achieve 1500 C temperature capability, helping enable next generation turbine engines with significantly improved engine component temperature capability and long-term durability.

HfO2-Si bond coat↗
NASA NTRS2016

Development Status and Performance Comparisons of Environmental Barrier Coating Systems for SiCSiC Ceramic Matrix Composites

Environmental barrier coatings (EBC) and SiCSiC ceramic matrix composites (CMCs) will play a crucial role in future aircraft turbine engine systems, because of their ability to significantly increase engine operating temperatures, reduce engine weight and cooling requirements. This paper presents current NASA EBC-CMC development emphases including: the coating composition and processing improvements, laser high heat flux-thermal gradient thermo-mechanical fatigue - environmental testing methodology development, and property evaluations for next generation EBC-CMC systems. EBCs processed with various deposition techniques including Plasma Spray, Electron Beam - Physical Vapor Deposition, and Plasma Spray Physical Vapor Deposition (PS-PVD) will be particularly discussed. The testing results and demonstrations of advanced EBCs-CMCs in complex simulated engine thermal gradient cyclic fatigue, oxidizing-steam and CMAS environments will help provide insights into the coating development strategies to meet long-term engine component durability goals.

Processing and Properties↗
NASA NTRS1970

Skylab Operations Handbook: Orbital Workshop (OWS), Airlock Module (AM), Multiple Docking Adapter (MDA): Systems Descriptions - Volume 1

The Skylab Program consists of three low-earth-orbit missions of the Orbital Assembly (OA) (figure 1.0-1), extending over.an a-month period. The OA consists of the CSM docked to the Saturn Workshop.(SWS). This handbook describes the systems for three of the four major components of the SWS (OWS, AM, and MDA), and also discusses significant interfaces with the Instrument Unit (IU), ATM, and CSM. The other major component of the SWS, the ATM, is treated separately in its own handbook. The OWS, AM, MDA, ATM Deployment Assembly (ATM-DA), Fixed Airlock Shroud (FAS), Payload Shroud (PS), and IU are addressed throughout this document as individual modules from a structural standpoint only. Although normally considered a part of the launch vehicle, the IU is treated in this document as part of the SWS because of its function in preparing the SWS for orbital operation. Section 1.0 describes vehicle and mission configurations of the Skylab program and provides general descriptions of the various systems. Section 2.0 provides detailed systems data covering system interfaces, functional description, subsystems and major components description, component operation, failure modes, performance and design data, operational limitations and restrictions, and instrumentation, and briefly outlines the experiments. Section 3.0 contains illustrations of all panels and identifies the controls and displays, panels, reference designators, nomenclature, functions, circuit breakers, and power sources. The Table of Contents lists in order of appearance all sections, subsections, major paragraphs, illustrations, and tables and provides their respective page locations. Appendix A defines the abbreviations and acronyms employed throughout this handbook, and Appendix B explains the symbols used. Appendix C is a locator index that references component controls contained in Section 3.0. Appendix D is an alphabetical index of paragraph headings, illustrations, and tables, according to the key word, with applicable page numbers. Additional items of significance to the user have been included in the index. The technical level to which this document is written assumes the reader to have general knowledge of engineering terms and principles.

West, W. D.↗
NASA NTRS2017

CMAS Interactions with Advanced Environmental Barrier Coatings Deposited via Plasma Spray- Physical Vapor Deposition

Materials for advanced turbine engines are expected to have temperature capabilities in the range of 1370-1500C. At these temperatures the ingestion of sand and dust particulate can result in the formation of corrosive glass deposits referred to as CMAS. The presence of this glass can both thermomechanically and thermochemically significantly degrade protective coatings on metallic and ceramic components. Plasma Spray- Physical Vapor Deposition (PS-PVD) was used to deposit advanced environmental barrier coating (EBC) systems for investigation on their interaction with CMAS compositions. Coatings were exposed to CMAS and furnace tested in air from 1 to 50 hours at temperatures ranging from 1200-1500C. Coating composition and crystal structure were tracked with X-ray diffraction and microstructure with electron microscopy.

Coatings↗
NASA NTRS2017

The Effect of Laminar Flow on Rotor Hover Performance

The topic of laminar flow effects on hover performance is introduced with respect to some historical efforts where laminar flow was either measured or attempted. An analysis method is outlined using combined blade element, momentum method coupled to an airfoil analysis method, which includes the full e(sup N) transition model. The analysis results compared well with the measured hover performance including the measured location of transition on both the upper and lower blade surfaces. The analysis method is then used to understand the upper limits of hover efficiency as a function of disk loading. The impact of laminar flow is higher at low disk loading, but significant improvement in terms of power loading appears possible even up to high disk loading approaching 20 ps f. A optimum planform design equation is derived for cases of zero profile drag and finite drag levels. These results are intended to be a guide for design studies and as a benchmark to compare higher fidelity analysis results. The details of the analysis method are given to enable other researchers to use the same approach for comparison to other approaches.

Overmeyer, Austin D.↗