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At least 307 records · Page 17

Role of consistent terminology in XPS reproducibility

The use of inconsistent and incorrect terminology in scientific publications contributes to misunderstanding, confusion, and erroneous results in the scientific literature. This issue is of particular importance in x-ray photoelectron spectroscopy (XPS) that is in widespread use for many different purposes by scientists with diverse backgrounds. A set of surface analysis terminology, approved through consensus by international experts, has been developed by International Organization for Standardization Technical Committee TC201 on Surface Chemical Analysis. To encourage wide use, the terminology is accessible at several web sites free of charge. This short overview provides examples to highlight the importance of agreed terminology in eliminating confusion between similar terms. Examples are provided of terms that are commonly misused or confused in the literature. Other examples highlight terminology that provides a common basis for comparing instrument parameters and performance. As science advances, it is important to clarify terminology for describing evolving concepts and developments important to XPS.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Peter Higgs (1929–2024)

Peter Ware Higgs, a particle physics icon, died on 8 April at the age of 94. Higgs illuminated the path to understanding how exact symmetries obeyed by the laws of nature might be masked by an asymmetric ground state that is an outcome of symmetrical laws. In 1964, he posited that a field filling all of space could be the agent that hides the underlying symmetries of the fundamental interactions. Additionally, when excited, the field reveals itself as a massive unstable particle. In the context of a joint theory of electromagnetism and the weak interaction, that particle—popularly called the Higgs boson—emerged as the keystone of the standard model of particle physics. The decades-long search for the boson engaged the passion of thousands of scientists and engineers and stirred the curiosity of the public the world over.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Development of learning objectives to support undergraduate virology curriculum guidelines

It has become increasingly important for microbiology educators to help students learn critical concepts of the discipline. This is particularly true in virology, where current challenges include increasing rates of vaccine hesitancy, misinformation about the COVID-19 pandemic, and controversy surrounding research on pathogens with pandemic potential. Having students learn virology can attract more people to the field and increase the number of people who can engage in meaningful discourse about issues relating to the discipline. However, the limited number of virologists who teach undergraduates, combined with the fact that many institutions lack stand-alone virology courses, results in virology often being taught as a limited number of lectures within an undergraduate microbiology course (if it is covered at all), which may or may not be taught by an individual trained as a virologist. To provide a framework to teach virology to undergraduate students, a team of virology educators, with support from the American Society for Virology (ASV), developed curriculum guidelines for use in a stand-alone undergraduate virology course or a virology section within another course. These guidelines are available at the ASV website (https://asv.org/curriculum-guidelines/). To assist educators in implementing these guidelines, we created examples of measurable learning objectives. This perspective provides details about the virology curriculum guidelines and learning objectives and accompanies the perspective by Boury et al. in this issue of the Journal of Microbiology & Biology Education about the recent revision of the microbiology curriculum guidelines overseen by the American Society for Microbiology.

59 BASIC BIOLOGICAL SCIENCES↗

Improve Learning from Crowds via Generative Augmentation

Crowdsourcing provides an efficient label collection schema for supervised machine learning. However, to control annotation cost, each instance in the crowdsourced data is typically annotated by a small number of annotators. This creates a sparsity issue and limits the quality of machine learning models trained on such data. In this paper, we study how to handle sparsity in crowdsourced data using data augmentation. Specifically, we propose to directly learn a classifier by augmenting the raw sparse annotations. We implement two principles of high-quality augmentation using Generative Adversarial Networks: 1) the generated annotations should follow the distribution of authentic ones, which is measured by a discriminator; 2) the generated annotations should have high mutual information with the ground-truth labels, which is measured by an auxiliary network. Extensive experiments and comparisons against an array of state-of-the-art learning from crowds methods on three real-world datasets proved the effectiveness of our data augmentation framework. It shows the potential of our algorithm for low-budget crowdsourcing in general.

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MCS+: An Efficient Algorithm for Crawling the Community Structure in Multiplex Networks

In this article, we consider the problem of crawling a multiplex network to identify the community structure of a layer-of-interest. A multiplex network is one where there are multiple types of relationships between the nodes. In many multiplex networks, some layers might be easier to explore (in terms of time, money etc.). We propose MCS+, an algorithm that can use the information from the easier to explore layers to help in the exploration of a layer-of-interest that is expensive to explore. We consider the goal of exploration to be generating a sample that is representative of the communities in the complete layer-of-interest. This work has practical applications in areas such as exploration of dark (e.g., criminal) networks, online social networks, biological networks, and so on. For example, in a terrorist network, relationships such as phone records, e-mail records, and so on are easier to collect; in contrast, data on the face-to-face communications are much harder to collect, but also potentially more valuable. We perform extensive experimental evaluations on real-world networks, and we observe that MCS+ consistently outperforms the best baseline—the similarity of the sample that MCS+ generates to the real network is up to three times that of the best baseline in some networks. We also perform theoretical and experimental evaluations on the scalability of MCS+ to network properties, and find that it scales well with the budget, number of layers in the multiplex network, and the average degree in the original network.

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OSTI Semantic Thesaurus v1

The OSTI Semantic Thesaurus is a reference for scientific and technical terms and relationships. The term data is used to implement keyword-to-concept mapping in OSTI.GOV searches, where searched term(s) will be mapped to related scientific concepts, allowing the end user to retrieve results related to their search terms and also explore narrower and similar concepts. The OSTI Semantic Thesaurus originally inherited data and structure from the INIS/ETDE Thesaurus (https://www.etde.org/edb/IAEA-INIS-ETDE-01-2013-08.pdf), which was a controlled terminology for indexing information within the subject scopes of the International Nuclear Information System (INIS) and the Energy Technology Data Exchange (ETDE). The data has been expanded upon since that time with the inclusion of scientific concepts from sources like Wikidata, and through manual curation. This dataset is an export from the OSTI Semantic Thesaurus in RDF/SKOS format, which is specifically suited for representation of controlled vocabularies like thesauri. While the full thesaurus includes additional relation types which may be included in future revisions, this export is limited to broader, narrower, and related term relations. Definitions and scope notes are included where available.

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A meta-analysis of semantic classification of citations

The aim of this literature review is to examine the current state of the art in the area of citation classification. In particular, we investigate the approaches for characterizing citations based on their semantic type. We conduct this literature review as a meta-analysis covering 60 scholarly articles in this domain. Although we included some of the manual pioneering works in this review, more emphasis is placed on the later automated methods, which use Machine Learning and Natural Language Processing (NLP) for analyzing the fine-grained linguistic features in the surrounding text of citations. The sections are organized based on the steps involved in the pipeline for citation classification. Specifically, we explore the existing classification schemes, data sets, pre-processing methods, extraction of contextual and non-contextual features, and the different types of classifiers and evaluation approaches. The review highlights the importance of identifying the citation types for research evaluation, the challenges faced by the researchers in the process, and the existing research gaps in this field.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Heavy-tailed distribution of the number of papers within scientific journals

Scholarly publications represent at least two benefits for the study of the scientific community as a social group. First, they attest to some form of relation between scientists (collaborations, mentoring, heritage, …), useful to determine and analyze social subgroups. Second, most of them are recorded in large databases, easily accessible and including a lot of pertinent information, easing the quantitative and qualitative study of the scientific community. Understanding the underlying dynamics driving the creation of knowledge in general, and of scientific publication in particular, can contribute to maintaining a high level of research, by identifying good and bad practices in science. In this article, we aim to advance this understanding by a statistical analysis of publication within peer-reviewed journals. Namely, we show that the distribution of the number of papers published by an author in a given journal is heavy-tailed, but has a lighter tail than a power law. Interestingly, we demonstrate (both analytically and numerically) that such distributions match the result of a modified preferential attachment process, where, on top of a Barabási-Albert process, we take the finite career span of scientists into account.

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People are like plutonium

An analogy is drawn between the study of human behavior and the study of plutonium to demonstrate that soft and hard sciences are more similar than different, making the distinction moot and unproductive. The studies of human behavior and plutonium follow a common scientific research cycle that aligns with Thomas Kuhn’s views of scientific change. This common research cycle provides evidence that the thought processes and methodologies required for success are congruent in the soft and hard sciences. The primary implication from this analogy is that scientists in all disciplines should eradicate the distinction between soft and hard sciences. Focusing on similarities rather than differences among researchers from different disciplines is necessary to enhance collective intelligence and the type of transdisciplinary collaboration required to tackle difficult sociotechnical problems. CCS Concepts: • Social and professional topics • User characteristics • Cultural characteristics.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

COVID-19 Knowledge Graph -- Dataset for SMCDC 2021 Challenge 2

This repository contains the data for the 2021 Smoky Mountains Computational Sciences Data Challenge (SMCDC21) Challenge 2 -- Finding Novel Links in COVID-19 Knowledge Graph. The total size of all files in this repository is 285MB. Challenge website: https://smc-datachallenge.ornl.gov/2021-challenge-2/ More information about the challenge and the data: https://github.com/ORNL/smcdc-2021-covid-kg

60 APPLIED LIFE SCIENCES↗

Initial Efforts Organizing WPNCS SG-8: Preservation of Expert Knowledge and Judgement Applied to Criticality Benchmarks

The Working Party on Nuclear Criticality Safety (WPNCS) under the guidance of the Organization for Economic Co-operation and Development (OECD) Nuclear Energy Agency (NEA) has over 20 years of experience addressing concerns related to static and transient configurations encountered within the nuclear fuel cycle: fuel fabrication, transportation, reprocessing, storage, and geological disposal. One of the cornerstone activities of the WPNCS is the International Criticality Safety Benchmark Evaluation Project (ICSBEP), which was established to identify a comprehensive set of criticality benchmark data, evaluate the data, including quantification of overall uncertainties; compile the data into a standardized format, perform sample calculations utilizing modern nuclear data sets and codes utilized in nuclear criticality safety, and formally document the work into a single source of verified benchmark data. Annually, members of the ICSBEP Technical Review Group (TRG) contribute evaluated benchmark data that undergoes comprehensive technical review prior to publication in the ICSBEP Handbook. In the years since the ICSBEP was established, there has been much work to prepare benchmark data to support validation activities in nuclear criticality safety. The 2020 edition of the ICSBEP Handbook contains acceptable benchmark specifications for 5,053 critical, subcritical, or near-critical configurations in 582 benchmark evaluations. Modern benchmark development benefits from decades of experienced international participants, a well-established handbook format, supplementary guides to deal with uncertainty quantification, and a comprehensive review process based upon independent reviews from international experts. The ICSBEP Handbook also contains 838 configurations deemed unacceptable to support criticality safety efforts. They are recorded, with the reasoning for their rejection, to preserve the experimental data, prevent reevaluation of data that are incomplete or contain known errors, and/or to potentially allow future reevaluation of the experiment pending the identification of sufficient data to resolve identified inconsistencies and errors. Users of the ICSBEP Handbook today might notice that the rigor and quality of modern criticality safety benchmarks is much greater than those prepared within the initial decade of the project. Benchmarks with 1s uncertainties in k eff greater than 1% were traditionally rejected unless they were identified as unique experiment types that encompassed materials, fuels, or designs not available from other benchmark experiments. However, benchmarks developed using modern experimental techniques and practices typically have uncertainties on the order of a few tenths of a percent. There have been ongoing efforts to improve the overall quality of previously published benchmark evaluations. Seventy-eight evaluations, containing approximately 600 configurations, have been revised just within the past decade. An additional eleven benchmarks are under revision for updated release in the 2020 edition of the ICSBEP Handbook. If some of the historic benchmarks were resubmitted in their current form to the TRG today, they would be rejected due to lack of data, missing components in the uncertainty analysis, or incomplete benchmark model development. The use of historic criticality safety benchmarks that underestimate the total uncertainty, lack properly quantified biases, or provide inadequate benchmark specifications do not sufficiently support modern criticality safety and nuclear data efforts. Although the ICSBEP Handbook is recognized by regulating bodies to support criticality safety, users are required to justify their reasons to ignore historic benchmark data and include additional safety margins within their designs. Discussions were held at the WPNCS 23rd Annual Meeting in September 2019 regarding the aforementioned issues. The resultant decision was to establish Subgroup 8 (SG-8): Preservation of Expert Knowledge and Judgement Applied to Criticality Benchmarks. The current activities of SG-8 are discussed herein.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Development of SCALE Tools for Sensitivity and Uncertainty Analysis Methodology Implementation (TSUNAMI) from SCALE 5 through SCALE 6.2

This review paper provides an abbreviated historical review of the development of the TSUNAMI capabilities in SCALE, beginning with the first initiatives, to provide new insights into validation, uncertainty quantification, and safety assessment. The tools of TSUNAMI have evolved substantially over two decades to meet the growing application analysis and experiment design needs. Even more advancements are emerging as the next generation of innovators continue to use and develop these tools.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Updated Primers Generated for SCALE 6.2 for KENO V.a and KENO-VI

Primers were developed and published for the use of the KENO V.a and KENO-VI codes in 2005 and 2008, respectively. These primers were both developed for SCALE 5 using the GeeWiz graphical user interface (GUI). Many new capabilities have been added to the transport codes since the release of these primers. The GUI was also changed to Fulcrum with the release of SCALE 6.2. For these reasons, updated versions of both primers were developed for a planned released in September 2020. The KENO V.a and KENO-VI codes are almost always run within the associated CSAS5 and CSAS6 sequences within SCALE, so the primers use the sequences and do not address running the codes in stand-alone mode.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Comparison of ISO and ANSI/ANS Nuclear Criticality Safety Standards

This paper provides a high-level comparison between the international and domestic Nuclear Criticality Safety (NCS) standards, as requested by members of the Nuclear Criticality Safety Division. Currently, there are 18 enacted American National Standards Institute (ANSI)/American National Standards (ANS) and 1 ANSI/ANS standard in progress. There are 11 NCS standards from the International Organization for Standardization (ISO), Technical Committee 85 (TC85) on Nuclear Energy, Subcommittee 5 (SC5) on Nuclear Fuel Cycle, Working Group 8 (WG8). There are NCS standard revisions in progress for both standards organizations.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Evaluation of Polyethylene and Blank Pulsed Sphere Experiments Using Deuteron Transport Feature in COG

From the late 1960s to about 1985, LLNL undertook a series of ‘pulsed sphere’ experiments for 31 materials involving 148 different experiments using 75 different spheres. The purpose was to measure the neutron leakage spectra for different materials from 14-MeV neutrons generated by 3 H(d,n) 4 He reactions induced by an incident D+ beam from the Insulated Core Transfer (ICT) accelerator at LLNL. This deuteron beam was focused to impinge upon tritium loaded onto a titanium substrate within a low mass target assembly placed within the center of a spherical shell constructed from the material of interest. COG is a three-dimensional, continuous energy, Monte Carlo code, developed by Lawrence Livermore National Laboratory (LLNL). Recent additions to COG include alpha and deuteron particle transport in order to directly calculate (α,n) and 3 H(d,n) 4 He reactions, and resulting neutron emission spectra. Results of the direct deuteron transport calculation for the 0.8 MFP (mean free path) polyethylene sphere with PILOT B detector was previously published. The purpose of this paper is to present expanded COG results showing the neutron peak from deuterium buildup ( 2 H(d,n) 3 He) due to tritium decay in the target. Cross section data libraries used are ENDF/B-VIII.0 for neutrons and ENDF/B-VII.1 for deuterons, respectively.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Cumulative $\chi^2$ Metric for VALID for ENDF/B-VII.1 and ENDF/B-VIII.0 in SCALE 6.3b9

Nuclear data testing is generally performed in a manner similar to validation: a series of critical benchmark experiments is modeled, and the differences between calculated and expected results are examined to understand the performance of a code and cross section set. This process is repeated for multiple sets of experiments with different transport codes and sometimes with different datasets. Occasionally, data processing differences are also important in understanding the differences in calculated results. Relevant experts then meet periodically to compare results and set priorities for improvement in the next round of data updates. This process has been largely effective, despite the confounding factors of different benchmark sets, application areas, sponsors, nationalities, and the resulting different priorities.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Update of the Nuclear Criticality Slide Rule: Review of the Estimation of the Number of Fissions

IRSN (France), LLNL (USA) and ORNL (USA) began a long-term collaboration effort in 2015 to update the nuclear criticality Slide Rule (https://ncsp.llnl.gov/analytical-methods/criticality-sliderule) for the emergency response to a nuclear criticality accident. The Slide Rule permits the estimation of neutron and gamma dose rates and integrated doses based upon estimated fission yields, as a function of distance from the fission source, and time after criticality accidents for different critical systems. This paper presents the review of the section “estimation of the number of fissions”, named “fission yield” in the Slide Rule document. This estimation is important because the other information provided by the Slide Rule is directly proportional to the number of fissions. The previous models, based on Hansen and Barbry formulae, will be presented with their associated assumptions and limitations. Then, new proposals will be presented with a comparison to past criticality accidents and experimental data. The new formulae, based on the heat energy equation, cover many types of criticality accidents (solution, dry or low-moderated powder, rods/assemblies in water and dry metal) and require limited information in an emergency situation.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗