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At least 307 records · Page 17

IEEE LDAV 2024 Preface

Join us here for the 14th IEEE Symposium on Large Data Analysis and Visualization (IEEE LDAV) on Sunday, October 13th 2024 collocated with IEEE VIS 2024 in St. Pete Beach, Florida, USA.

Beyer, Johanna↗

Extremely Scalable Distributed Computation of Contour Trees via Pre-Simplification

Contour trees offer an abstract representation of the level set topology in scalar fields and are widely used in topological data analysis and visualization. However, applying contour trees to large-scale scientific datasets remains challenging due to scalability limitations. Recent developments in distributed hierarchical contour trees have addressed these challenges by enabling scalable computation across distributed systems. Building on these structures, advanced analytical tasks—such as volumetric branch decomposition and contour extraction—have been introduced to facilitate large-scale scientific analysis. Despite these advancements, such analytical tasks substantially increase memory usage, which hampers scalability. In this paper, we propose a pre-simplification strategy to significantly reduce the memory overhead associated with analytical tasks on distributed hierarchical contour trees. We demonstrate enhanced scalability through strong scaling experiments, constructing the largest known contour tree—comprising over half a trillion nodes with complex topology—in under 15 minutes on a dataset containing 550 billion elements.

Li, Mingzhe [University of Utah]↗

Dax v. 1.0

The Dax Toolkit enables the fine-grained concurrency for data analysis and visualization required to drive multi-core processors, many-core GPU accelerators, and emerging architectures for exascale computing. Dax simplifies the design of finely threaded algorithms by characterizing them in per element operations, which we call worklets. Worklets simplify design because they can behave as serial processes without the complications of memory clashes or other race conditions. Yet worklets can be scheduled on a practically unlimited number of threads, thereby making effective utilization of many processing cores. Operations coordinated across elements are encapsulated in a few versatile communicative operations that are adapted to the specifics of computing devices.

SciDAC↗

Picviewer v0.0.1

PICviewer is an easy-to-use graphical user interface for data analysis and visualization of Particle-In-Cell (PIC) simulations.

Park, Jaehong↗

NDDAV

Web-based Interface for the N-Dimensional Data Analysis and Visualization System.

Liu, Shusen↗

Light Water Reactor Sustainability Program Support and Modeling for the Boiling Water Reactor Station Black Out Case Study Using RELAP and RAVEN

The existing fleet of nuclear power plants is in the process of extending its lifetime and increasing the power generated. In order to evaluate the impact of these two factors on the safety of the plant, the Risk Informed Safety Margin Characterization (RISMC) project aims to provide insight to decision makers through a series of simulations of the plant dynamics for different initial conditions (e.g., probabilistic analysis and uncertainty quantification). This report focuses, in particular, on the impact of power uprate on the safety of a boiled water reactor system. The case study considered is a loss of off-site power followed by the loss of diesel generators, i.e., a station black out (SBO) event. Analysis is performed by using a thermo-hydraulic code, i.e. RELAP-5, and a stochastic analysis tool currently under development at INL, i.e. RAVEN. Starting from the event tree models contained in SAPHIRE, we built the input file for RELAP-5 that models in great detail system dynamics under SBO conditions. We also interfaced RAVEN with RELAP-5 so that it would be possible to run multiple RELAP-5 simulation runs by changing specific keywords of the input file. We both employed classical statistical tools, i.e. Monte-Carlo, and more advanced machine learning based algorithms to perform uncertainty quantification in order to quantify changes in system performance and limitations as a consequence of power uprate. We also employed advanced data analysis and visualization tools that helped us to correlate simulation outcome such as maximum core temperature with a set of input uncertain parameters. Results obtained gave a detailed overview of the issues associated to power uprate for a SBO accident scenario. We were able to quantify how timing of safety related events were impacted by a higher reactor core power. Such insights can provide useful material to the decision makers to perform risk-infomed safety margins management.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

An Update on Improvements to NiCE Support for PROTEUS

The Department of Energy Office of Nuclear Energy's Nuclear Energy Advanced Modeling and Simulation (NEAMS) program has supported the development of the NEAMS Integrated Computational Environment (NiCE), a modeling and simulation workflow environment that provides services and plugins to facilitate tasks such as code execution, model input construction, visualization, and data analysis. This report details the development of workflows for the reactor core neutronics application, PROTEUS. This advanced neutronics application (primarily developed at Argonne National Laboratory) aims to improve nuclear reactor design and analysis by providing an extensible and massively parallel, finite-element solver for current and advanced reactor fuel neutronics modeling. The integration of PROTEUS-specific tools into NiCE is intended to make the advanced capabilities that PROTEUS provides more accessible to the nuclear energy research and development community. This report will detail the work done to improve existing PROTEUS workflow support in NiCE. We will demonstrate and discuss these improvements, including the development of flexible IO services, an improved interface for input generation, and the addition of advanced Fortran development tools natively in the platform.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

5th Annual Earth System Grid Federation Face-to-Face Conference report, Monterey, California, December 7-11, 2015

The purpose of the Fifth Annual Earth System Grid Federation (ESGF) Face-to-Face (F2F) Conference was to present the most recent information on the state of ESGF’s software stack and to identify and address the data needs and gaps for the climate and weather communities that ESGF supports. This was the first meeting at which members of the international community, under international ESGF Executive Committee leadership, came together to host the conference. The organizers believed that the ESGF F2F Conference was an ideal gateway for agencies and science project leads to express their current and future data infrastructure needs to tool developers. The organizers also envisioned that attendees would brainstorm and share enhancement plans for data distribution, analysis, visualization, hardware and international network infrastructure, standards, and utilization of assorted community resources.

54 ENVIRONMENTAL SCIENCES↗

A Mountaintop View Requires Minimal Sorting: A Faster Contour Tree Algorithm

Consider a scalar field f : M → R, where M is a triangulated simplicial mesh in R d . A level set, or contour, at value v is a connected component of f –1 (v). As v is changed, these contours change topology, merge into each other, or split. Contour trees are concise representations of f that track this contour behavior. The vertices of these trees are the critical points of f, where the gradient is zero. The edges represent changes in the topology of contours. It is a fundamental data structure in data analysis and visualization, and there is significant previous work (both theoretical and practical) on algorithms for constructing contour trees. Suppose M has n vertices, N facets, and t critical points. A classic result of Carr, Snoeyink, and Axen (2000) gives an algorithm that takes O(n log n+Nα(N)) time (where α(·) is the inverse Ackermann function). A further improvement to O(t log t + N) time was given by Chiang et al. All these algorithms involve a global sort of the critical points, a significant computational bottleneck. Unfortunately, lower bounds of Ω(t log t) also exist. We present the first algorithm that can avoid the global sort and has a refined time complexity that depends on the contour tree structure. Intuitively, if the tree is short and fat, we get significant improvements in running time. For a partition of the contour tree into a set of descending paths, P, our algorithm runs in O($\Sigma$ pϵP |p| log |p| + tα(t) + N). This is at most O(t log D + N), where D is the diameter of the contour tree. Moreover, it is O(tα(t) + N) for balanced trees, a significant improvement over the previous complexity. Our algorithm requires numerous ideas: partitioning the contour tree into join and split trees, a local growing procedure to iteratively build contour trees, and the use of heavy path decompositions for the time complexity analysis. There is a crucial use of a family of binomial heaps to maintain priorities, ensuring that any comparison made is between comparable nodes of the contour tree. We also prove lower bounds showing that the $\Sigma$ pϵP |p| log |p| complexity is inherent to computing contour trees.

97 MATHEMATICS AND COMPUTING↗

Quantum Computing – Real-Time Data Processing from a Dilution Refrigerator

This poster presents a real-time data visualization system for monitoring and displaying data from a Bluefors control unit connected to a dilution refrigerator. The goal is to provide an aesthetically pleasing and user-friendly web-based interface that continuously updates and displays critical data such as temperature and flow rates at various points within the refrigerator. Leveraging WebSocket technology, the system establishes multiple connections to the dilution refrigerators, enabling simultaneous monitoring of several units. The interactive webpage dynamically updates the data, providing researchers and operators with instant insights into the system's performance. The system's ability to stream and visualize data in real-time enhances the understanding of the dilution refrigerator's behavior, aiding in optimizing its operation and ensuring efficient scientific experiments. The application's web-based nature makes it easily accessible from any device with internet connectivity, promoting seamless collaboration and remote monitoring capabilities. Overall, this poster offers a comprehensive solution for real-time data visualization and analysis of dilution refrigerators, catering to the needs of researchers and scientists working in low-temperature physics and quantum computing fields.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

SoDaH: the SOils DAta Harmonization database, an open-source synthesis of soil data from research networks, version 1.0

Data collected from research networks present opportunities to test theories and develop models about factors responsible for the long-term persistence and vulnerability of soil organic matter (SOM). Synthesizing datasets collected by different research networks presents opportunities to expand the ecological gradients and scientific breadth of information available for inquiry. Synthesizing these data is challenging, especially considering the legacy of soil data that have already been collected and an expansion of new network science initiatives. To facilitate this effort, here we present the SOils DAta Harmonization database (SoDaH; https://lter.github.io/som-website, last access: 22 December 2020), a flexible database designed to harmonize diverse SOM datasets from multiple research networks. SoDaH is built on several network science efforts in the United States, but the tools built for SoDaH aim to provide an open-access resource to facilitate synthesis of soil carbon data. Moreover, SoDaH allows for individual locations to contribute results from experimental manipulations, repeated measurements from long-term studies, and local- to regional-scale gradients across ecosystems or landscapes. Finally, we also provide data visualization and analysis tools that can be used to query and analyze the aggregated database. The SoDaH v1.0 dataset is archived and available at https://doi.org/10.6073/pasta/9733f6b6d2ffd12bf126dc36a763e0b4 (Wieder et al., 2020).

54 ENVIRONMENTAL SCIENCES↗

Metis – A Tool to Harmonize and Analyze Multi-Sectoral Data and Linkages at Variable Spatial Scales

Metis was developed to allow users to analyze regional and sub-regional multi-sector dynamics by providing a platform to harmonize and amalgamate data from different models and stakeholders operating at variable spatial scales. Metis is an open-source R package hosted on GitHub. Metis functions collectively allow users to compare, manipulate, and harmonize multi-sector data at user-specified spatial scales, and to identify and quantify sectoral inter-linkages. Each Metis function can also be used independently to support an array of other research applications, such as spatial analysis and data visualization.

97 MATHEMATICS AND COMPUTING↗

Battery inverter experimental data

The increase in power electronic based generation sources require accurate modeling of inverters. Accurate modeling requires experimental data over wider operation range. We used 30 kW off-the-shelf grid following battery inverter in the experiments. We used controllable AC supply and controllable DC supply to emulate AC and DC side characteristics. The experiments were performed at NREL's Energy Systems Integration Facility. Inverter is tested under 100%, 75%, 50%, 25% load conditions. In the first dataset, for each operating condition, controllable AC source voltage is varied from 0.9 to 1.1 per unit (p.u) with a step value of 0.025 p.u while keeping the frequency at 60 Hz. In the second dataset, under similar load conditions (100%, 75%, 50%, 25% ), the frequency of the controllable AC source voltage was varied from 59 Hz to 61 Hz with a step value of 0.2 Hz. Voltage and frequency range is chosen based on inverter protection. Voltages and currents on DC and AC side are included in the dataset.

24 POWER TRANSMISSION AND DISTRIBUTION↗

PV inverter experimental data

The increase in power electronic based generation sources require accurate modeling of inverters. Accurate modeling requires experimental data over wider operation range. We used 20 kW off-the-shelf grid following PV inverter in the experiments. We used controllable AC supply and controllable DC supply to emulate AC and DC side characteristics. The experiments were performed at NREL's Energy Systems Integration Facility. Due to the limitations of the DC supply used, inverter is tested under 75%, 50%, 25% load conditions (This dataset does not contain 100% load condition). In the first dataset, for each operating condition, controllable AC source voltage is varied from 0.88 to 1.09 per unit (p.u) with a step value of 0.025 p.u while keeping the frequency at 60 Hz. In the second dataset, under similar load conditions (75%, 50%, 25% ), the frequency of the controllable AC source voltage was varied from 59.4 Hz to 60.45 Hz with a step value of 0.2 Hz. Voltage and frequency range is chosen based on inverter protection. Voltages and currents on DC and AC side are included in the dataset.

24 POWER TRANSMISSION AND DISTRIBUTION↗

PV Inverter Experimental Dataset Version 2 with 100 Percent Power

The increase in power electronic based generation sources require accurate modeling of inverters. Accurate modeling requires experimental data over wider operation range. We used 20 kW off-the-shelf grid following PV inverter in the experiments. We used controllable AC supply and controllable DC supply to emulate AC and DC side characteristics. The experiments were performed at NREL's Energy Systems Integration Facility. The PV inverter is tested under 100%, 75%, 50%, 25% load conditions. In the first dataset, for each operating condition, controllable AC source voltage is varied from 0.88 to 1.09 per unit (p.u) with a step value of 0.025 p.u while keeping the frequency at 60 Hz. In the second dataset, under similar load conditions (100%, 75%, 50%, 25% ), the frequency of the controllable AC source voltage was varied from 59.4 Hz to 60.45 Hz with a step value of 0.2 Hz. Voltage and frequency range is chosen based on inverter protection. Voltages and currents on DC and AC side are included in the dataset.

14 SOLAR ENERGY↗