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NASA NTRS2012

Widespread Weathered Glass on the Surface of Mars

Low albedo sediments cover >10(exp 7) sq km in the northern lowlands of Mars, but the composition and origin of these widespread deposits have remained ambiguous despite many previous investigations. Here we use near-infrared spectra acquired by the Mars Express OMEGA (Observatoire pour la Mineralogie, l'Eau, les Glaces, et l'Activite') imaging spectrometer to show that these sediments exhibit spectral characteristics that are consistent with both high abundances of iron-bearing glass and silica-enriched leached rinds on glass. This interpretation is supported by observations of low-albedo soil grains with possible rinds at the Phoenix Mars Lander landing site in the northern lowlands. By comparison with the extensive glass-rich dune fields and sand sheets of Iceland, we propose an explosive volcanic origin for these glass-rich sediments. We also propose that the glassy remnant rinds on the sediments are the result of post-depositional alteration, as these rinds are commonly formed in arid terrestrial volcanic environments during water-limited, moderately acidic leaching. These weathered, glass-rich deposits in the northern lowlands are also colocated with the strongest concentrations of a major global compositional surface type previously identified in mid-infrared spectra, suggesting that they may be representative of global processes. Our results provide potential confirmation of models suggesting that explosive volcanism has been widespread on Mars, and also raise the possibilities that glass-rich volcaniclastics are a major source of eolian sand on Mars and that widespread surficial aqueous alteration has occurred under Amazonian climatic conditions.

Horgan, Briony↗
NASA NTRS2012

Active Upper-atmosphere Chemistry and Dynamics from Polar Circulation Reversal on Titan

Saturn's moon Titan has a nitrogen atmosphere comparable to Earth's, with a surface pressure of 1.4 bar. Numerical models reproduce the tropospheric conditions very well but have trouble explaining the observed middle-atmosphere temperatures, composition and winds. The top of the middle-atmosphere circulation has been thought to lie at an altitude of 450 to 500 kilometres, where there is a layer of haze that appears to be separated from the main haze deck. This 'detached' haze was previously explained as being due to the colocation of peak haze production and the limit of dynamical transport by the circulation's upper branch. Herewe report a build-up of trace gases over the south pole approximately two years after observing the 2009 post-equinox circulation reversal, from which we conclude that middle-atmosphere circulation must extend to an altitude of at least 600 kilometres. The primary drivers of this circulation are summer-hemisphere heating of haze by absorption of solar radiation and winter-hemisphere cooling due to infrared emission by haze and trace gases; our results therefore imply that these effects are important well into the thermosphere (altitudes higher than 500 kilometres). This requires both active upper-atmosphere chemistry, consistent with the detection of high-complexity molecules and ions at altitudes greater than 950 kilometres, and an alternative explanation for the detached haze, such as a transition in haze particle growth from monomers to fractal structures.

Titan Atmosphere↗
NASA NTRS2014

Status of the NASA GMAO Observing System Simulation Experiment

An Observing System Simulation Experiment (OSSE) is a pure modeling study used when actual observations are too expensive or difficult to obtain. OSSEs are valuable tools for determining the potential impact of new observing systems on numerical weather forecasts and for evaluation of data assimilation systems (DAS). An OSSE has been developed at the NASA Global Modeling and Assimilation Office (GMAO, Errico et al 2013). The GMAO OSSE uses a 13-month integration of the European Centre for Medium- Range Weather Forecasts 2005 operational model at T511/L91 resolution for the Nature Run (NR). Synthetic observations have been updated so that they are based on real observations during the summer of 2013. The emulated observation types include AMSU-A, MHS, IASI, AIRS, and HIRS4 radiance data, GPS-RO, and conventional types including aircraft, rawinsonde, profiler, surface, and satellite winds. The synthetic satellite wind observations are colocated with the NR cloud fields, and the rawinsondes are advected during ascent using the NR wind fields. Data counts for the synthetic observations are matched as closely as possible to real data counts, as shown in Figure 2. Errors are added to the synthetic observations to emulate representativeness and instrument errors. The synthetic errors are calibrated so that the statistics of observation innovation and analysis increments in the OSSE are similar to the same statistics for assimilation of real observations, in an iterative method described by Errico et al (2013). The standard deviations of observation minus forecast (xo-H(xb)) are compared for the OSSE and real data in Figure 3. The synthetic errors include both random, uncorrelated errors, and an additional correlated error component for some observational types. Vertically correlated errors are included for conventional sounding data and GPS-RO, and channel correlated errors are introduced to AIRS and IASI (Figure 4). HIRS, AMSU-A, and MHS have a component of horizontally correlated error. The forecast model used by the GMAO OSSE is the Goddard Earth Observing System Model, Version 5 (GEOS-5) with Gridpoint Statistical Interpolation (GSI) DAS. The model version has been updated to v. 5.13.3, corresponding to the current operational model. Forecasts are run on a cube-sphere grid with 180 points along each edge of the cube (approximately 0.5 degree horizontal resolution) with 72 vertical levels. The DAS is cycled at 6-hour intervals, with 240 hour forecasts launched daily at 0000 UTC. Evaluation of the forecasting skill for July and August is currently underway. Prior versions of the GMAO OSSE have been found to have greater forecasting skill than real world forecasts. It is anticipated that similar forecast skill will be found in the updated OSSE.

OSSE↗
NASA NTRS2014

Evaluation of Cloud-Resolving and Limited Area Model Intercomparison Simulations Using TWP-ICE Observations: Precipitation Microphysics - Part 2

Ten 3-D cloud-resolving model (CRM) simulations and four 3-D limited area model (LAM) simulations of an intense mesoscale convective system observed on 23-24 January 2006 during the Tropical Warm Pool-International Cloud Experiment (TWP-ICE) are compared with each other and with observations and retrievals from a scanning polarimetric radar, colocated UHF and VHF vertical profilers, and a Joss-Waldvogel disdrometer in an attempt to explain a low bias in simulated stratiform rainfall. Despite different forcing methodologies, similar precipitation microphysics errors appear in CRMs and LAMs with differences that depend on the details of the bulk microphysics scheme used. One-moment schemes produce too many small raindrops, which biases Doppler velocities low, but produces rainwater contents (RWCs) that are similar to observed. Two-moment rain schemes with a gamma shape parameter (mu) of 0 produce excessive size sorting, which leads to larger Doppler velocities than those produced in one-moment schemes but lower RWCs. Two-moment schemes also produce a convective median volume diameter distribution that is too broad relative to observations and, thus, may have issues balancing raindrop formation, collision-coalescence, and raindrop breakup. Assuming a mu of 2.5 rather than 0 for the raindrop size distribution improves one-moment scheme biases, and allowing mu to have values greater than 0 may improve excessive size sorting in two-moment schemes. Underpredicted stratiform rain rates are associated with underpredicted ice water contents at the melting level rather than excessive rain evaporation, in turn likely associated with convective detrainment that is too high in the troposphere and mesoscale circulations that are too weak. A limited domain size also prevents a large, well-developed stratiform region like the one observed from developing in CRMs, although LAMs also fail to produce such a region.

three dimensional models↗
NASA NTRS2017

US Navy Submarine Sea Trial of NASA developed Multi-Gas Monitor

During a successful 2 year technology demonstration of the tunable diode laser spectroscopy (TDLS) based Multi-Gas Monitor (MGM) on the International Space Station (ISS), we began discussing with the US Navy the possibility of conducting a sea trial of an MGM on a submarine. The sea trial would also include a gas chromatography/differential mobility spectrometer based Air Quality Monitor (AQM), which is used operationally on ISS for select volatile organic compounds. AQM results will be the subject of a separate paper. The Navy’s interest in testing NASA equipment is in a planned update to the environmental monitoring equipment used aboard submarines. NASA’s goal is studying submarines as closed environment analogs to spacecraft. MGM’s core technology was developed by Vista Photonics Inc using Small Business Innovation Research (SBIR) grants and expanded for various applications using NASA program funding. The MGM measures oxygen, carbon dioxide, ammonia and water vapor in ambient air, displays concentrations with temperature and pressure, and stores 30 second moving averages. The sea trial involves colocating the instrument with the Central Air Monitor (CAM) and connecting it to rack power prior to departure, and letting it run during the entire sea trial of a few months duration. All data stored is inside MGM, with no connection to the vessel data bus. Crew intervention is limited to checking MGM periodically to see that it is working and power cycling if the display is OFF. After the trial is over, the unit with its data will be retrieved. Post sea trial calibration check and data analysis are planned and results will be compared with both CAM data and results from MGM’s ISS technology demonstration.

Mudgett, Paul D.↗
NASA NTRS2016

Using CATS Near-Real-time Lidar Observations to Monitor and Constrain Volcanic Sulfur Dioxide (SO2) Forecasts

An eruption of Italian volcano Mount Etna on 3 December 2015 produced fast-moving sulfur dioxide (SO2) and sulfate aerosol clouds that traveled across Asia and the Pacific Ocean, reaching North America in just 5 days. The Ozone Profiler and Mapping Suite's Nadir Mapping UV spectrometer aboard the U.S. National Polar-orbiting Partnership satellite observed the horizontal transport of the SO2 cloud. Vertical profiles of the colocated volcanic sulfate aerosols were observed between 11.5 and 13.5 km by the new Cloud Aerosol Transport System (CATS) space-based lidar aboard the International Space Station. Backward trajectory analysis estimates the SO2 cloud altitude at 7-12 km. Eulerian model simulations of the SO2 cloud constrained by CATS measurements produced more accurate dispersion patterns compared to those initialized with the back trajectory height estimate. The near-real-time data processing capabilities of CATS are unique, and this work demonstrates the use of these observations to monitor and model volcanic clouds.

space↗
NASA NTRS2016

Evaluating Multispectral Snowpack Reflectivity With Changing Snow Correlation Lengths

This study investigates the sensitivity of multispectral reflectivity to changing snow correlation lengths. Matzler's ice-lamellae radiative transfer model was implemented and tested to evaluate the reflectivity of snow correlation lengths at multiple frequencies from the ultraviolet (UV) to the microwave bands. The model reveals that, in the UV to infrared (IR) frequency range, the reflectivity and correlation length are inversely related, whereas reflectivity increases with snow correlation length in the microwave frequency range. The model further shows that the reflectivity behavior can be mainly attributed to scattering rather than absorption for shallow snowpacks. The largest scattering coefficients and reflectivity occur at very small correlation lengths (approximately 10(exp -5 m) for frequencies higher than the IR band. In the microwave range, the largest scattering coefficients are found at millimeter wavelengths. For validation purposes, the ice-lamella model is coupled with a multilayer snow physics model to characterize the reflectivity response of realistic snow hydrological processes. The evolution of the coupled model simulated reflectivities in both the visible and the microwave bands is consistent with satellite-based reflectivity observations in the same frequencies. The model results are also compared with colocated in situ snow correlation length measurements (Cold Land Processes Field Experiment 2002-2003). The analysis and evaluation of model results indicate that the coupled multifrequency radiative transfer and snow hydrology modeling system can be used as a forward operator in a data-assimilation framework to predict the status of snow physical properties, including snow correlation length.

Kang, Do Hyuk↗
NASA NTRS2017

Intercalibration of AMSR2 NASA Team 2 Algorithm Sea Ice Concentrations with AMSR-E Slow Rotation Data

Sea ice estimates from AMSR2 are intercalibrated with AMSR-E fields through a two-step process. First, slow rotation 2 r/min AMSR-E data is used to derive regression equations from colocated pairs of AMSR2 and AMSR-E brightness temperatures (Tb s). The regression equations are used to modify AMSR2 Tb s into AMSR-E equivalent Tb s that are then input into the NASA Team 2 (NT2) sea ice concentration algorithm used for the AMSR-E standard products. The regressed Tb s result in changes in sea ice concentration of a few percent compared to using the original un-regressed AMSR2 Tb s. Next, sea ice estimates from the F17 SSMIS sensor are used as a bridge to compare AMSR-E total sea ice extent estimates in 2010 with AMSR2 total sea ice extent estimates in 2013. Based on this comparison, a further adjustment is made to a weather filter threshold used in the NT2 algorithm to minimize the total extent bias between AMSR2 and AMSR-E using a double-differencing approach. The adjustments reduced apparent bias with AMSR-E from 200 000 km2 for the original unmodified AMSR2 Tb s to –700 and 4700 km2 for the Arctic and Antarctic, respectively. These differences are within the range of previous passive microwave sea ice intercalibrations. The adjusted AMSR2 sea ice fields provide a nearly 15-year time series of sea ice change; depending on the lifetime of AMSR2 and possible follow on sensors, AMSR2 has the potential to be part of a multidecadal record of sea ice change.

remote sensing↗
NASA NTRS2018

Modernizing and Expanding the NASA Space Geodesy Network to Meet Future Geodetic Requirements

NASA maintains and operates a global network of Very Long Baseline Interferometry (VLBI), Satellite Laser Ranging (SLR), and Global Navigation Satellite System ground stations as part of the NASA Space Geodesy Program. The NASA Space Geodesy Network (NSGN) provides the geodetic products that support Earth observations and the related science requirements as outlined by the US National Research Council (NRC in Precise geodetic infrastructure: national requirements for a shared resource, National Academies Press, Washington, 2010. http://nap.edu/12954, Thriving on our changing planet: a decadal strategy for Earth observation from space, National Academies Press, Washington, 2018. http://nap.edu/24938). The Global Geodetic Observing System (GGOS) and the NRC have set an ambitious goal of improving the Terrestrial Reference Frame to have an accuracy of 1 mm and stability of 0.1 mm per year, an order of magnitude beyond current capabilities. NASA and its partners within GGOS are addressing this challenge by planning and implementing modern geodetic stations colocated at existing and new sites around the world. In 2013, NASA demonstrated the performance of its next-generation systems at the prototype next-generation core site at NASA’s Goddard Geophysical and Astronomical Observatory in Greenbelt, Maryland. Implementation of a new broadband VLBI station in Hawaii was completed in 2016. NASA is currently implementing new VLBI and SLR stations in Texas and is planning the replacement of its other aging domestic and international legacy stations. In this article, we describe critical gaps in the current global network and discuss how the new NSGN will expand the global geodetic coverage and ultimately improve the geodetic products. We also describe the characteristics of a modern NSGN site and the capabilities of the next-generation NASA SLR and VLBI systems. Finally, we outline the plans for efficiently operating the NSGN by centralizing and automating the operations of the new geodetic stations.

Merkowitz, S. M.↗
NASA NTRSDate not supplied

TPSAS-NF1676L-21952-DND

DISCOVER-AQ was a 4-year NASA project aimed to improve the interpretation of total column satellite observations to help diagnose near-surface conditions relating to air quality. During DISCOVER-AQ HSRL-2 was flown onboard the NASA Langley B200 King Air. A suite of in-situ instruments was flown onboard NASA Wallops P-3B aircraft which spiraled up and down over a number of ground stations. The two aircraft flew coordinated flight tracks, both flying over several designated ground stations with close time coincidence, allowing for colocation of measurements from the in situ instruments suite and the HSRL-2. HSRL-2 is the first multiwavelength airborne lidar system that provides profiles of 3β (backscatter)+2α(extinction),allowing the retrieval of microphysical parameters like number, surface-area, and volume concentrations, and effective radius.

Patricia Sawamura↗
NASA NTRSDate not supplied

TPSAS-NF1676L-16988-DND

There has been renewed interest to uniformly recalibrate historical geostationary (GEO) data records to aid in climate monitoring. GEO sensors have annual repeatable angular sampling over a given location. The view angle is fixed and the imaging schedule is usually constant through its lifetime. Given the fact that colocated GEOs are always share the same sub-satellite point and maintain their imaging schedules provides repeatable angular sampling over decades. One of the biggest challenges in transferring a reference sensor calibration using invariant desert targets to another sensor is the accuracy of the bidirectional reflectance distribution function (BDRF). A well-calibrated GEO can be used to predict the daily exoatmospheric radiance model (DERM) over a desert target for a given GMT that is valid for any GEO sensor at the same location. The advantage of this method is that a BRDF is not needed. Another challenge of invariant target calibration is the unique spectra signature of the desert. However, since most GEOs are built in batches, the spectral response functions (SRF) are very similar for most historical GEOs, the spectral band adjustment factor (SBAF) between GEO sensors is much smaller than for MODIS and GEO sensors. Since the water vapor burden over the desert is seasonal, both the TOA and desert surface can be considered invariant for a given day of the year. The reference GEO can be inter-calibrated with MODIS or VIIRS, which have onboard visible calibration using solar diffusers, using other methods, such as ray-matching or deep convective clouds. Also the next generation GEOs will have onboard visible calibration, which will increase the accuracy of this method. Three Meteosats over the Libyan desert will be used to illustrate the DERM method. The reference Meteosat will be inter-calibrated against Aqua-MODIS. The reference GEO DERM will be constructed and used to calibrate the remaining Meteosats. The DERM calibration will be validated by comparing the calibration using Aqua-MODIS ray-matching. Similarly, two GOES sensors using the Sonoran desert will also be highlighted. An uncertainty analysis will also be performed with emphasis on the SBAF, derived over the desert targets using both SCIAMACHY and Hyperion hyper-spectral radiances.

David Doelling↗
NASA NTRS2020

Constraining the Twomey effect from satellite observations: Issues and perspectives

The Twomey effect describes the radiative forcing associated with a change in cloud albedo due to an increase in anthropogenic aerosol emissions. It is driven by the perturbation in cloud droplet number concentration (ΔNd,ant) in liquid-water clouds and is currently understood to exert a cooling effect on climate. The Twomey effect is the key driver in the effective radiative forcing due to aerosol–cloud interactions which also comprises rapid adjustments. These adjustments are essentially the responses of cloud fraction and liquid water path to ΔNd,ant and thus scale approximately with it. While the fundamental physics of the influence of added aerosol particles on the droplet concentration (Nd) is well described by established theory at the particle scale (micrometres), how this relationship is expressed at the large scale (hundreds of kilometres) ΔNd,ant remains uncertain. The discrepancy between process understanding at particle scale and insufficient quantification at the climate-relevant large scale is caused by co-variability of aerosol particles and vertical wind and by droplet sink processes. These operate at scales on the order of 10s of metres at which only localized observations are available and at which no approach exists yet to quantify the anthropogenic perturbation. Different atmospheric models suggest diverse magnitudes of the Twomey effect even when applying the same anthropogenic aerosol emission perturbation. Thus, observational data are needed to quantify and constrain the Twomey effect. At the global scale, this means satellite data. There are three key uncertainties in determining ΔNd,ant, namely the quantification (i) of the cloud-active aerosol – the cloud condensation nuclei concentrations (CCN) at or above cloud base –, (ii) of Nd, as well as (iii) the statistical approach for inferring the sensitivity of Nd to aerosol particles from the satellite data. A fourth uncertainty, the anthropogenic perturbation to CCN concentrations, is also not easily accessible from observational data. This review discusses deficiencies of current approaches for the different aspects of the problem and proposes several ways forward: In terms of CCN, retrievals of optical quantities such as aerosol optical depth suffer from a lack of vertical resolution, size and hygroscopicity information, the non-direct relation to the concentration of aerosols, the impossibility to quantify it within or below clouds, and the problem of insufficient sensitivity at low concentrations, in addition to retrieval errors. A future path forward can include utilizing colocated polarimeter and lidar instruments, ideally including high spectral resolution lidar capability at two wavelengths to maximize vertically resolved size distribution information content. In terms of Nd, a key problem is the lack of operational retrievals of this quantity, and the inaccuracy of the retrieval especially in broken-cloud regimes. As for the Nd – to – CCN sensitivity, key issues are the updraught distributions and the role of Nd sink processes, for which empirical assessments for specific cloud regimes are currently the best solutions. These considerations point to the conclusion that past studies using existing approaches have likely underestimated the true sensitivity and, thus, the radiative forcing due to the Twomey effect.

Twomey effect↗
NASA NTRS2020

Aerosol Layer Height with Enhanced Spectral Coverage Achieved by Synergy between VIIRS and OMPS-NM Measurements

This letter presents a near production-ready algorithm to retrieve the height of biomass burning smoke and mineral dust aerosols as part of National Aeronautics and Space Administration (NASA)’s Deep Blue aerosol data product suite. It utilizes the enhanced spectral coverage achieved by using colocated data from the Visible Infrared Imaging Radiometer Suite (VIIRS) and the Ozone Mapping and Profiler Suite Nadir Mapper (OMPS-NM), both aboard the Suomi National Polar-orbiting Partnership (S-NPP) satellite. In particular, the 412-nm top-of-atmosphere (TOA) reflectance from VIIRS and the ultraviolet aerosol index from OMPS-NM are used to determine the height and single-scattering albedo of the absorbing aerosols simultaneously. Constraints on aerosol optical depth at 550 nm and surface reflectance for the 412-nm band are provided by the operational VIIRS Deep Blue aerosol product. Wildfire smoke layer heights obtained from the algorithm over North America, where smoke plumes often stretched thousands of kilometers, are shown to agree with those from Cloud–Aerosol Lidar with Orthogonal Polarization (CALIOP) measurements, with an uncertainty generally within 1–1.5 km. This new height data set will be included in the upcoming Version 2 VIIRS Deep Blue aerosol product.

aerosol↗
NASA NTRS2021

Inference of Precipitation in Warm Stratiform Clouds using Remotely Sensed Observations of the Cloud Top Droplet Size Distribution

Drizzle is a common feature of warm stratiform clouds and it influences their radiative effects by modulating their physical properties and lifecycle. An important component of drizzle formation are processes that lead to a broadening of the droplet size distribution (DSD). Here, we examine observations of cloud and drizzle properties retrieved using colocated airborne measurements from the Research Scanning Polarimeter and the Third Generation Airborne Precipitation Radar. We observe a bimodal DSD as the aircraft transects drizzling open-cells whereby the larger mode reaches a maximum size near cloud center and the smaller mode remains relatively constant in size. We review similarities between our observations with droplet growth processes and their connections with precipitation onset. We estimate droplet sedimentation using the cloud top DSD and find a correlation with rain water path of 0.82. We also examine how changes in liquid water paths and droplet concentrations may act to enhance or suppress precipitation.

Droplet size distribution↗
NASA NTRS2020

The Relationship Between MAIAC Smoke Plume Heights and Surface PM

Biomass burning is a source of fine particulate matter (PM2.5) air pollution, which adversely impacts human health. However, quantifying the health effects from biomass burning PM2.5 is difficult. Monitoring networks generally lack the spatial density needed to capture the heterogeneity of biomass burning smoke. Satellite aerosol optical depth (AOD) can be used to fill spatial gaps but does not distinguish surface‐level aerosols. Plume height (PH) observations may provide constraints on the vertical distribution of smoke and its impact on surface concentrations. We assessed PH characteristics from Multi‐Angle Implementation of Atmospheric Correction (MAIAC) and evaluated its correlation with colocated PM2.5 and AOD measurements. PH is generally highest over the western United States. The ratio PM2.5:AOD generally decreases with increasing PH:PBLH (planetary boundary layer height), showing that PH has the potential to refine surface PM2.5 estimates for collections of smoke events.

satellite retrieved smoke plume heights↗
NASA NTRS2020

The Precipitation Imaging Package: Assessment of Microphysical and Bulk Characteristics of Snow

Remote-sensing observations are needed to estimate the regional and global impacts of snow. However, to retrieve accurate estimates of snow mass and rate, these observations require augmentation through additional information and assumptions about hydrometeor properties. The Precipitation Imaging Package (PIP) provides information about precipitation characteristics and can be utilized to improve estimates of snowfall rate and accumulation. Here, the goal is to demonstrate the quality and utility of two higher-order PIP-derived products: liquid water equivalent snow rate and an approximation of volume-weighted density called equivalent density. Accuracy of the PIP snow rate and equivalent density is obtained through intercomparison with established retrieval methods and through evaluation with colocated ground-based observations. The results confirm the ability of the PIP-derived products to quantify properties of snow rate and equivalent density, and demonstrate that the PIP produces physically realistic snow characteristics. When compared to the National Weather Service (NWS) snow field measurements of six-hourly accumulation, the PIP-derived accumulations were biased only +2.48% higher. Additionally, this work illustrates fundamentally different microphysical and bulk features of low and high snow-to-liquid ratio events, through assessment of observed particle size distributions, retrieved mass coefficients, and bulk properties. Importantly, this research establishes the role that PIP observations and higher-order products can serve for constraining microphysical assumptions in ground-based and spaceborne remotely sensed snowfall retrievals.

Claire Pettersen↗
NASA NTRS2021

Oncogenic Integration of Nucleotide Metabolism via Fatty Acid Synthase in Non-Hodgkin Lymphoma

Metabolic dysfunctions enabling increased nucleotide biosynthesis are necessary for supporting malignant proliferation. Our investigations indicate that upregulation of fatty acid synthase (FASN) and de novo lipogenesis, commonly observed in many cancers, are associated with nucleotide metabolic dysfunction in lymphoma. The results from our experiments showed that ribonucleotide and deoxyribonucleotide pool depletion, suppression of global RNA/DNA synthesis, and cell cycle inhibition occurred in the presence of FASN inhibition. Subsequently, we observed that FASN inhibition caused metabolic blockade in the rate-limiting step of the oxidative branch of the pentose phosphate pathway (oxPPP) catalyzed by phosphogluconate dehydrogenase (PGDH). Furthermore, we determined that FASN inhibitor treatment resulted in NADPH accumulation and inhibition of PGDH enzyme activity. NADPH is a cofactor utilized by FASN, also a known allosteric inhibitor of PGDH. Through cell-free enzyme assays consisting of FASN and PGDH, we delineated that the PGDH-catalyzed ribulose-5-phosphate synthesis is enhanced in the presence of FASN and is suppressed by increasing concentrations of NADPH. Additionally, we observed that FASN and PGDH were colocalized in the cytosol. The results from these experiments led us to conclude that NADP–NADPH turnover and the reciprocal stimulation of FASN and PGDH catalysis are involved in promoting oxPPP and nucleotide biosynthesis in lymphoma. Finally, a transcriptomic analysis of non-Hodgkin’s lymphoma (n = 624) revealed the increased expression of genes associated with metabolic functions interlinked with oxPPP, while the expression of genes participating in oxPPP remained unaltered. Together we conclude that FASN–PGDH enzymatic interactions are involved in enabling oxPPP and nucleotide metabolic dysfunction in lymphoma tumors.

Non-Hodgkin lymphoma↗
NASA NTRS2021

Liana optical traits increase tropical forest albedo and reduce ecosystem productivity

Lianas are a key growth form in tropical forests. Their lack of self-supporting tissues and their vertical position on top of the canopy make them strong competitors of resources. A few pioneer studies have shown that liana optical traits differ on average from those of colocated trees. Those trait discrepancies were hypothesized to be responsible for the competitive advantage of lianas over trees. Yet, in the absence of reliable modelling tools, it is impossible to unravel their impact on the forest energy balance, light competition, and on the liana success in Neotropical forests. To bridge this gap, we performed a meta-analysis of the literature to gather all published liana leaf optical spectra, as well as all canopy spectra measured over different levels of liana infestation. We then used a Bayesian data assimilation framework applied to two radiative transfer models (RTMs) covering the leaf and canopy scales to derive tropical tree and liana trait distributions, which finally informed a full dynamic vegetation model. According to the RTMs inversion, lianas grew thinner, more horizontal leaves with lower pigment concentrations. Those traits made the lianas very efficient at light interception and significantly modified the forest energy balance and its carbon cycle. While forest albedo increased by 14% in the shortwave, light availability was reduced in the understorey (−30% of the PAR radiation) and soil temperature decreased by 0.5°C. Those liana-specific traits were also responsible for a significant reduction of tree (−19%) and ecosystem (−7%) gross primary productivity (GPP) while lianas benefited from them (their GPP increased by +27%). This study provides a novel mechanistic explanation to the increase in liana abundance, new evidence of the impact of lianas on forest functioning, and paves the way for the evaluation of the large-scale impacts of lianas on forest biogeochemical cycles.

Félicien Meunier↗