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At least 289 records · Page 16
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Mechanistic assessment of tolerance to iron deficiency mediated by Trichoderma harzianum in soybean roots

Abstract Aims Iron (Fe) deficiency in soil is a continuing problem for soybean (Glycine max L.) production, partly as a result of continuing climate change. This study elucidates how Trichoderma harzianum strain T22 (TH) mitigates growth retardation associated with Fe-deficiency in a highly sensitive soybean cultivar. Methods and Results Soil TH supplementation led to mycelial colonization and the presence of UAOX1 gene in roots that caused substantial improvement in chlorophyll score, photosynthetic efficiency and morphological parameters, indicating a positive influence on soybean health. Although rhizosphere acidification was found to be a common feature of Fe-deficient soybean, the upregulation of Fe-reductase activity (GmFRO2) and total phenol secretion were two of the mechanisms that substantially increased the Fe availability by TH. Heat-killed TH applied to soil caused no improvement in photosynthetic attributes and Fe-reductase activity, confirming the active role of TH in mitigating Fe-deficiency. Consistent increases in tissue Fe content and increased Fe-transporter (GmIRT1, GmNRAMP2a, GmNRAMP2b and GmNRAMP7) mRNA levels in roots following TH supplementation were observed only under Fe-deprivation. Root cell death, electrolyte leakage, superoxide (O2•–) and hydrogen peroxide (H2O2) substantially declined due to TH in Fe-deprived plants. Further, the elevation of citrate and malate concentration along with the expression of citrate synthase (GmCs) and malate synthase (GmMs) caused by TH suggest improved chelation of Fe in Fe-deficient plants. Results also suggest that TH has a role in triggering antioxidant defence by increasing the activity of glutathione reductase (GR) along with elevated S-metabolites (glutathione and methionine) to stabilize redox status under Fe-deficiency. Conclusions TH increases the availability and mobilization of Fe by inducing Fe-uptake pathways, which appears to help provide resistance to oxidative stress associated with Fe-shortage in soybean. Significance and Impact of the Study These findings indicate that while Fe deficiency does not affect the rate or degree of TH hyphal association in soybean roots, the beneficial effects of TH alone may be Fe deficiency-dependent.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Spectroscopy-based isotopic (δ 13 C) analysis for high spatial resolution of carbon exchange in the rhizosphere

The rhizosphere is a highly dynamic zone bridging plant roots with needed nutrient resources in soil. While the rhizosphere may be small, it has a disproportionally large impact on plant success and biomass production. A suite of rhizosphere-hosted microbial and geochemical interactions facilitate nutrient acquisition by plant roots, and, in turn, the roots stimulate these processes by supplying organic carbon into the rhizosphere. The small physical dimensions of the rhizosphere, however, can constrain efforts to elucidate key carbon exchange processes and their spatial extent and localization. We present a method for spatially resolved δ 13 C analysis of rhizosphere samples by coupling laser ablation (LA) sampling with isotopic analysis using capillary absorption spectroscopy (CAS) which differs from conventional mass spectrometer (MS) approaches. The CAS system has high sensitivity (requires fewer nanomoles of CO 2 per analysis) than comparable MS systems, which enables reduced sample size requirements to thereby improve spatial resolution (from 25 μm to as low as a projected 5 μm spatial resolution). We demonstrate the utility of CAS using rhizosphere samples from switchgrass plants exposed to 13 CO 2 . As a result, this technique will provide a capability for tracking the extent and spatial distribution of root exudate into the rhizosphere at highly detailed spatial scales.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Systematic approaches to C-lignin engineering in Medicago truncatula

Abstract Background C-lignin is a homopolymer of caffeyl alcohol present in the seed coats of a variety of plant species including vanilla orchid, various cacti, and the ornamental plant Cleome hassleriana . Because of its unique chemical and physical properties, there is considerable interest in engineering C-lignin into the cell walls of bioenergy crops as a high-value co-product of bioprocessing. We have used information from a transcriptomic analysis of developing C. hassleriana seed coats to suggest strategies for engineering C-lignin in a heterologous system, using hairy roots of the model legume Medicago truncatula . Results We systematically tested strategies for C-lignin engineering using a combination of gene overexpression and RNAi-mediated knockdown in the caffeic acid/5-hydroxy coniferaldehyde 3/5-O-methyltransferase ( comt ) mutant background, monitoring the outcomes by analysis of lignin composition and profiling of monolignol pathway metabolites. In all cases, C-lignin accumulation required strong down-regulation of caffeoyl CoA 3- O -methyltransferase (CCoAOMT) paired with loss of function of COMT. Overexpression of the Selaginella moellendorffii ferulate 5-hydroxylase ( SmF5H ) gene in comt mutant hairy roots resulted in lines that unexpectedly accumulated high levels of S-lignin. Conclusion C-Lignin accumulation of up to 15% of total lignin in lines with the greatest reduction in CCoAOMT expression required the strong down-regulation of both COMT and CCoAOMT, but did not require expression of a heterologous laccase, cinnamyl alcohol dehydrogenase (CAD) or cinnamoyl CoA reductase (CCR) with preference for 3,4-dihydroxy-substituted substrates in M. truncatula hairy roots. Cell wall fractionation studies suggested that the engineered C-units are not present in a heteropolymer with the bulk of the G-lignin.

09 BIOMASS FUELS↗
DOE OSTI2020

DSCOVR/EPIC-derived global hourly and daily downward shortwave and photosynthetically active radiation data at 0.1° × 0.1° resolution

Downward shortwave radiation (SW) and photosynthetically active radiation (PAR) play crucial roles in Earth system dynamics. Spaceborne remote sensing techniques provide a unique means for mapping accurate spatiotemporally continuous SW–PAR, globally. However, any individual polar-orbiting or geostationary satellite cannot satisfy the desired high temporal resolution (sub-daily) and global coverage simultaneously, while integrating and fusing multisource data from complementary satellites/sensors is challenging because of co-registration, intercalibration, near real-time data delivery and the effects of discrepancies in orbital geometry. The Earth Polychromatic Imaging Camera (EPIC) on board the Deep Space Climate Observatory (DSCOVR), launched in February 2015, offers an unprecedented possibility to bridge the gap between high temporal resolution and global coverage and characterize the diurnal cycles of SW–PAR globally. In this study, we adopted a suite of well-validated data-driven machine-learning models to generate the first global land products of SW–PAR, from June 2015 to June 2019, based on DSCOVR/EPIC data. The derived products have high temporal resolution (hourly) and medium spatial resolution (0.1°×0.1°), and they include estimates of the direct and diffuse components of SW–PAR. We used independently widely distributed ground station data from the Baseline Surface Radiation Network (BSRN), the Surface Radiation Budget Network (SURFRAD), NOAA's Global Monitoring Division and the U.S. Department of Energy's Atmospheric System Research (ASR) program to evaluate the performance of our products, and we further analyzed and compared the spatiotemporal characteristics of the derived products with the benchmarking Clouds and the Earth's Radiant Energy System Synoptic (CERES) data. We found both the hourly and daily products to be consistent with ground-based observations (e.g., hourly and daily total SWs have low biases of -3.96 and -0.71 W m -2 and root-mean-square errors (RMSEs) of 103.50 and 35.40 W m -2 , respectively). The developed products capture the complex spatiotemporal patterns well and accurately track substantial diurnal, monthly, and seasonal variations in SW–PAR when compared to CERES data. They provide a reliable and valuable alternative for solar photovoltaic applications worldwide and can be used to improve our understanding of the diurnal and seasonal variabilities of the terrestrial water, carbon and energy fluxes at various spatial scales.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Benefits of symbiotic ectomycorrhizal fungi to plant water relations depend on plant genotype in pinyon pine

Rhizosphere microbes, such as root-associated fungi, can improve plant access to soil resources, affecting plant health, productivity, and stress tolerance. While mycorrhizal associations are ubiquitous, plant–microbe interactions can be species specific. Here we show that the specificity of the effects of microbial symbionts on plant function can go beyond species level: colonization of roots by ectomycorrhizal fungi (EMF) of the genus Geopora has opposite effects on water uptake, and stomatal control of desiccation in drought tolerant and intolerant genotypes of pinyon pine (Pinus edulis Engelm.). These results demonstrate, for the first time, that microorganisms can have significant and opposite effects on important plant functional traits like stomatal control of desiccation that are associated with differential mortality and growth in nature. They also highlight that appropriate pairing of plant genotypes and microbial associates will be important for mitigating climate change impacts on vegetation.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS2012

Evaluation of Moderate-Resolution Imaging Spectroradiometer (MODIS) Snow Albedo Product (MCD43A) over Tundra

This study assesses the MODIS standard Bidirectional Reflectance Distribution Function (BRDF)/Albedo product, and the daily Direct Broadcast BRDF/Albedo algorithm at tundra locations under large solar zenith angles and high anisotropic diffuse illumination and multiple scattering conditions. These products generally agree with ground-based albedo measurements during the snow cover period when the Solar Zenith Angle (SZA) is less than 70deg. An integrated validation strategy, including analysis of the representativeness of the surface heterogeneity, is performed to decide whether direct comparisons between field measurements and 500- m satellite products were appropriate or if the scaling of finer spatial resolution airborne or spaceborne data was necessary. Results indicate that the Root Mean Square Errors (RMSEs) are less than 0.047 during the snow covered periods for all MCD43 albedo products at several Alaskan tundra areas. The MCD43 1- day daily albedo product is particularly well suited to capture the rapidly changing surface conditions during the spring snow melt. Results also show that a full expression of the blue sky albedo is necessary at these large SZA snow covered areas because of the effects of anisotropic diffuse illumination and multiple scattering. In tundra locations with dark residue as a result of fire, the MODIS albedo values are lower than those at the unburned site from the start of snowmelt.

Wang, Zhuosen↗
NASA NTRS2009

Skill Assessment of a Spectral Ocean-Atmosphere Radiative Model

Ocean phytoplankton, detrital material, and water absorb and scatter light spectrally. The Ocean- Atmosphere Spectral Irradiance Model (OASIM) is intended to provide surface irradiance over the oceans with sufficient spectral resolution to support ocean ecology, biogeochemistry, and heat exchange investigations, and of sufficient duration to support inter-annual and decadal investigations. OASIM total surface irradiance (integrated 200 nm to 4 microns) was compared to in situ data and three publicly available global data products at monthly 1-degree resolution. OASIM spectrally-integrated surface irradiance had root mean square (RMS) difference= 20.1 W/sq m (about 11%), bias=1.6 W/sq m (about 0.8%), regression slope= 1.01 and correlation coefficient= 0.89, when compared to 2322 in situ observations. OASIM had the lowest bias of any of the global data products evaluated (ISCCP-FD, NCEP, and ISLSCP 11), and the best slope (nearest to unity). It had the second best RMS, and the third best correlation coefficient. OASIM total surface irradiance compared well with ISCCP-FD (RMS= 20.7 W/sq m; bias=-11.4 W/sq m, r=0.98) and ISLSCP II (RMS =25.2 W/sq m; bias= -13.8 W/sq m; r=0.97), but less well with NCEP (RMS =43.0 W/sq m ;bias=-22.6 W/sq m; x=0.91). Comparisons of OASIM photosynthetically available radiation (PAR) with PAR derived from SeaWiFS showed low bias (-1.8 mol photons /sq m/d, or about 5%), RMS (4.25 mol photons /sq m/d ' or about 12%), near unity slope (1.03) and high correlation coefficient (0.97). Coupled with previous estimates of clear sky spectral irradiance in OASIM (6.6% RMS at 1 nm resolution), these results suggest that OASIM provides reasonable estimates of surface broadband and spectral irradiance in the oceans, and can support studies on ocean ecosystems, carbon cycling, and heat exchange.

Gregg, Watson, W.↗
DOE OSTI2025

Concentrations and Health Implications of As, Hg, and Cd and Micronutrients in Rice and Emissions of CH 4 From Variably Flooded Paddies

Abstract The flooded soil conditions under which rice is typically grown are beneficial for boosting yield and decreasing herbicide inputs but may pose a food safety and environmental health risk. Flooded soils lead to reducing conditions and anaerobic metabolisms of soil microorganisms, which mobilizes arsenic from soil into soil solution, where it can be absorbed by rice roots and transported to grain. These conditions also promote the production and emission of methane (CH 4 )—a potent greenhouse gas. To evaluate how water management affects metal(loid) grain concentrations and CH 4 emissions, we conducted a 2‐year field study in which rice paddy water was managed under a range of soil redox conditions that spanned from flooded to non‐flooded. We observed that growing rice under less flooded conditions decreased CH 4 emissions and concentrations of grain total As, grain inorganic As, grain total Hg, and grain inorganic Hg relative to flooded conditions, with more reductions observed as conditions were drier; grain organic As and Hg (MeHg) species also decreased with drier conditions particularly in Year 1. However, the driest conditions tested led to a 50%–97% increase in grain Cd concentrations that exceeded the CODEX limit and grain yield reductions as high as 25% and 40% in Year 1 and 2, respectively. While concentrations of toxic metal(loid)s could be manipulated by water management, micronutrient concentrations were similar or decreased with drier conditions, potentially increasing grain Cd bioaccessibility to humans. Because practices for rice water management are gaining momentum, more research should monitor grain Cd levels along with micronutrients.

Environmental Sciences & Ecology↗
DOE OSTI2021

A Method for Estimating Time-Series PV Production Loss From Solar Tracking Failures

Solar tracking system failures can dramatically reduce photovoltaic (PV) system energy output through suboptimal irradiance capture and self-shading loss. Detecting tracker failures is not always straightforward; unlike other common PV system failures like inverter outages and blown fuses which take portions of a system completely offline, tracker failures only partially reduce output power and can go unnoticed as a result. Additionally, tracker failures can take one of several forms, each with their own loss characteristics. Here we present two methods of detecting tracker failure events from time-series production data and a method for estimating the associated production loss. Compared with existing detection methods, the proposed power-based detection method showed 0-17% reductions in Type I error rate depending on weather conditions. Here, the loss model estimated production loss with low error (mean bias error = -2.3 %, root-mean-squared error = 6%) in a rudimentary validation.

14 SOLAR ENERGY↗
NASA NTRS1991

Relationships between CH4 emission, biomass, and CO2 exchange in a subtropical grassland

Methane flux was linearly correlated with plant biomass (r = 0.97, n = 6 and r = 0.95, n = 8) at two locations in a Florida Everglades Cladium marsh. One location, which had burned 4 months previously, exhibited a greater increase in methane flux as a function of biomass relative to sites at an unburned location. However, methane flux data from both sites fit a single regression (r = 0.94, n = 14) when plotted against net CO2 exchange suggesting that either methanogenesis in Everglades marl sediments is fueled by root exudation below ground, or that factors which enhance photosynthetic production and plant growth are also correlated with methane production and flux in this oligotrophic environment. The data presented are the first to show a direct relationship between spatial variability in plant biomass, net ecosystem production, and methane emission in a natural wetland.

Whiting, Gary J.↗
NASA NTRS2003

ASF3

This reporting period marked a change in the funding configuration from a combination of a grant and a contract from two different National Aeronautics and Space Administration (NASA) sections to one single contract. One year of this reporting was under the grant/kontract configuration with the changeover occurring on 1 April 2003. Much of the work duties remained the same with some exception, notably the removal of the RADARSAT Geophysical Processor System and the removal of the commercialization line item from the contract. We chose this reporting period as a transition from the previous reporting period of 1 April to 31 March, to the current reporting period of 18 November to 17 November. The Alaska Synthetic Aperture Facility s (ASF) mission has been updated to carry us forward into the future congruent with our changed relationship with NASA. ASF will continue to evolve, and NASA will remain our primary customer. To compliment our new mission, we have a new name, the Alaska Satellite Facility (ASF), deeply rooted in the University environment and focused on satellite data products, services, and science support. We have the opportunity to reshape and rebuild ASF; we will continue to honor our heritage and Serve the science community. Our long-term goals include the commitment to continued first-rate service to our user community. This report contains input from ASF as a whole on the three major components of the NASA Contract, namely tasks devoted to the Distributed Active Archive Center (DAAC), the Receiving Ground Station (RGS), and the National Oceanics and Atmospherics Administration (NOAA).

LaBelle-Hamer, Nettie↗
DOE OSTI2020

Mycorrhizal effector PaMiSSP10b alters polyamine biosynthesis in Eucalyptus root cells and promotes root colonization

Summary Pathogenic microbes are known to manipulate the defences of their hosts through the production of secreted effector proteins. More recently, mutualistic mycorrhizal fungi have also been described as using these secreted effectors to promote host colonization. Here we characterize a mycorrhiza‐induced small secreted effector protein of 10 kDa produced by the ectomycorrhizal fungus Pisolithus albus , PaMiSSP10b. We demonstrate that PaMiSSP10b is secreted from fungal hyphae, enters the cells of its host, Eucalyptus grandis, and interacts with an S‐adenosyl methionine decarboxylase (AdoMetDC) in the polyamine pathway. Plant polyamines are regulatory molecules integral to the plant immune system during microbial challenge. Using biochemical and transgenic approaches we show that expression of PaMiSSP10b influences levels of polyamines in the plant roots as it enhances the enzymatic activity of AdoMetDC and increases the biosynthesis of higher polyamines. This ultimately favours the colonization success of P. albus . These results identify a new mechanism by which mutualistic microbes are able to manipulate the host´s enzymatic pathways to favour colonization.

Plett, Jonathan M.↗
NASA NTRS1989

A center for commercial development of space: Real-time satellite mapping. Remote sensing-based agricultural information expert system

The research project results in a powerful yet user friendly CROPCAST expert system for use by a client to determine the crop yield production of a certain crop field. The study is based on the facts that heuristic assessment and decision making in agriculture are significant and dominate much of agribusiness. Transfer of the expert knowledge concerning remote sensing based crop yield production into a specific expert system is the key program in this study. A knowledge base consisting of a root frame, CROP-YIELD-FORECAST, and four subframes, namely, SATELLITE, PLANT-PHYSIOLOGY, GROUND, and MODEL were developed to accommodate the production rules obtained from the domain expert. The expert system shell Personal Consultant Plus version 4.0. was used for this purpose. An external geographic program was integrated to the system. This project is the first part of a completely built expert system. The study reveals that much effort was given to the development of the rules. Such effort is inevitable if workable, efficient, and accurate rules are desired. Furthermore, abundant help statements and graphics were included. Internal and external display routines add to the visual capability of the system. The work results in a useful tool for the client for making decisions on crop yield production.

Hadipriono, Fabian C.↗
NASA NTRS1982

Feasibility study of solid surface subreflector production techniques

The principal effort was to study technical feasibility and cost aspects of the production technique of spin forming a subreflector reflective surface to a desired surface of revolution, back the surface with fiberglass to stabilize it sufficiently so that it may be machined to the target surface tolerance of .008 inches Root Mean Square (RMS) with a goal of .003 inches RMS. To verify this production technique, analyses was performed to define the production procedure. A price estimate for a 150 inch diameter subreflector for a 34 meter cassegrain antenna. During this feasibility study, numerous production processes were evaluated theoretically as production approaches for single surface, non-welded subreflectors. The first successful was the principal process of spin forming the reflective surface, backing with fiberglass and machining to a final contour. The second successful process was spin forming or bump forming a thicker reflective surface, with an integral (welded in) structure as a backing and machining the mounting pads and reflector to a final configuration.

Source record↗
NASA NTRS2003

Increased Agrobacterium-mediated transformation and rooting efficiencies in canola (Brassica napus L.) from hypocotyl segment explants

An efficient protocol for the production of transgenic Brassica napus cv. Westar plants was developed by optimizing two important parameters: preconditioning time and co-cultivation time. Agrobacterium tumefaciens-mediated transformation was performed using hypocotyls as explant tissue. Two variants of a green fluorescent protein (GFP)-encoding gene--mGFP5-ER and eGFP--both under the constitutive expression of the cauliflower mosaic virus 35S promoter, were used for the experiments. Optimizing the preconditioning time to 72 h and co-cultivation time with Agrobacterium to 48 h provided the increase in the transformation efficiency from a baseline of 4% to 25%. With mGFP5-ER, the transformation rate was 17% and with eGFP it was 25%. Transgenic shoots were selected on 200 mg/l kanamycin. Rooting efficiency was 100% on half-strength Murashige and Skoog medium with 10 g/l sucrose and 0.5 mg/l indole butyric acid in the presence of kanamycin.

NASA Discipline Life Sciences Technologies↗
NASA NTRS2021

Validation Assessment for the Soil Moisture Active Passive (SMAP) Level 4 Carbon (L4_C) Data Product Version 5

The post-launch Cal/Val phase of the SMAP mission is guided by two primary objectives for each science product team: 1) to calibrate, verify, and improve the performance of the science algorithms, and 2) validate accuracies of the science data products as specified in the SMAP Level-1 mission science requirements. Algorithm science and product maintenance activities during the SMAP extended mission phase have also involved periodic algorithm calibration and product refinements to maintain or enhance product consistency and performance as well as science utility. This report provides an assessment of the latest (Version 5) SMAP Level 4 Carbon (L4_C) product. The L4_C Version 5 (v5) global record now spans more than six years (March 2015 – present) of SMAP operations and has benefited from five major reprocessing updates to the operational product. These reprocessing events and L4_C product release updates have incorporated various algorithm refinements and calibration adjustments to account for similar refinements to the upstream GEOS land model assimilation system, SMAP brightness temperatures, and MODIS vegetation inputs used for L4_C processing. The SMAP L4_C algorithms utilize a terrestrial carbon flux model informed by daily surface and root zone soil moisture information contributed from the SMAP Level 4 Soil Moisture (L4_SM) product along with optical remote sensing-based (e.g. MODIS-based) land cover and canopy fractional photosynthetic active radiation (fPAR), and other ancillary biophysical data. The carbon flux model estimates global daily net ecosystem CO2 exchange (NEE) and the component carbon fluxes, namely, vegetation gross primary production (GPP) and soil heterotrophic respiration (Rh). Other L4_C product elements include surface (~0-5 cm depth) soil organic carbon (SOC) stocks and associated environmental constraints to these processes, including soil moisture-related controls on GPP and ecosystem respiration (Kimball et al. 2014, Jones et al. 2017). The L4_C product addresses SMAP carbon cycle science objectives by: 1) providing a direct link between terrestrial carbon fluxes and underlying freeze/thaw and soil moisture-related constraints to these processes, 2) documenting primary connections between terrestrial water, energy and carbon cycles, and 3) improving understanding of terrestrial carbon sink activity. The SMAP L4_C algorithms and operational product are mature and at a CEOS Validation Stage 4 level (Jackson et al. 2012) based on extensive validation of the multi-year record against a diverse array of independent benchmarks, well characterized global performance, and systematic refinements gained from five major reprocessing events. There are no Level-1 mission science requirements for the L4_C product; however, self-imposed requirements have been established focusing on NEE as the primary product field for validation, and on demonstrating L4_C accuracy and success in meeting product science requirements (Jackson et al. 2012). The other L4_C product fields also have strong utility for carbon science applications (e.g., Liu et al. 2019, Endsley et al. 2020); however, analysis of these other fields is considered secondary relative to primary validation activities focusing on NEE. The L4_C targeted accuracy requirements are to meet or exceed a mean unbiased root-mean-square error (ubRMSE, or standard deviation of the error) for NEE of 1.6 g C m-2 d-1 and 30 g C m-2 yr-1, emphasizing northern (≥45°N) boreal and arctic ecosystems; this accuracy is similar to that of tower eddy covariance measurement-based observations (Baldocchi 2008). Methods used for the latest v5 L4_C product performance and validation assessment have been established from the SMAP Cal/Val plan and previous studies (Jackson et al. 2012, Jones et al. 2017) and include: 1) consistency evaluations of the product fields against earlier product releases (version 4 or earlier); 2) comparisons of daily carbon flux estimates with independent tower eddy 4covariance measurement-based daily carbon (CO2) flux observations from core tower validation sites (CVS); and 3) consistency checks against other global carbon products, including soil carbon inventory records, global GPP records derived from tower observation upscaling methods, and satellite-based observations of canopy solar induced chlorophyll fluorescence (SIF) as a surrogate for GPP. Metrics used to evaluate relative agreement between L4_C product fields and observational benchmarks include correlation (r-value), RMSE differences, bias and model sensitivity diagnostics. Following these validation criteria, the present report provides a validation assessment of the latest L4_C product release (v5). Detailed descriptions of the L4_C algorithm and additional global product accuracy and performance results are given elsewhere (Jones et al. 2017, Endsley et al. 2020). The v5 L4_C product replaces earlier product versions and continues to show: (i) accuracy and performance levels meeting or exceeding SMAP L4_C science requirements; (ii) improvement over the previous product version (version 4); and (iii) suitability for a diversity of science applications. Example L4_C applications from the recent literature include clarifying environmental trends and controls on the northern terrestrial carbon sink (Liu et al. 2019), diagnosing drought-related impacts on ecosystem productivity (Li et al. 2020), and regional monitoring of cropland conditions for projecting annual yields (Wurster et al. 2020). 2EXPECTED L4_C ALGORITHM AND PRODUCTPERFORMANCE The L4_C algorithm performance, including variance and uncertainty estimates of model outputs, was determined during the mission pre-launch phase through spatially explicit model sensitivity studies using available model inputs similar to those currently being used for operational production and evaluating the resulting model simulations over the observed range of northern (≥45 °N) and global conditions (Kimball et al. 2012, Entekhabi et al. 2014). The L4_C algorithm options were also evaluated during the mission prelaunch phase, including deriving canopy fPAR from lower order NDVI (Normalized Difference Vegetation Index) inputs in lieu of using MODIS (MOD15) fPAR; and including an explicit model representation of boreal fire disturbance recovery impacts. These results indicated that the L4_C accuracy requirements (i.e., NEE ubRMSE ≤ 30 g C m-2 yr-1or ≤ 1.6 g C m-2 d-1) could be met from the baseline algorithms over more than 82% and 89% of global and northern vegetated land areas, respectively (Yi et al. 2013, Kimball et al. 2014). The global L4_C algorithm error budget for NEE derived during the mission prelaunch phase indicated that the estimated NEE ubRMSE uncertainty is proportional to GPP and is therefore larger in higher biomass productivity areas, including forests and croplands (Kimball et al. 2014). Likewise, NEE ubRMSE uncertainty is expected to be lower in less-productive areas, including grasslands and shrublands. Expected model NEE ubRMSE levels were also generally within targeted accuracy levels for characteristically less-productive boreal and Arctic biomes, even though relative model error as a proportion of total productivity (NEE RMSE / GPP) may be large in these areas. The estimated NEE uncertainty was lower than expected in some warmer tropical high biomass productivity areas (e.g. Amazon rainforest) because of reduced low temperature and moisture constraints to the L4_C respiration calculations so that the bulk of model uncertainty is contributed by GPP in these areas. Model NEE uncertainty in the African Congo was estimated to

SMAP↗
DOE OSTI2025

Enrichment of root-associated Streptomyces strains in response to drought is driven by diverse functional traits and does not predict beneficial effects on plant growth

The genus Streptomyces has consistently been found enriched in drought-stressed plant root microbiomes, yet the ecological basis and functional variation underlying this enrichment at the strain and isolate level remain unclear. Using two 16S rRNA sequencing methods with different levels of taxonomic resolution, we confirmed drought-associated enrichment (DE) of Streptomyces in field-grown sorghum roots and identified five closely related but distinct amplicon sequence variants (ASVs) belonging to the genus with variable drought enrichment patterns. From a culture collection of sorghum root endophytes, we selected 12 Streptomyces isolates representing these ASVs for phenotypic and genomic characterization. Whole-genome sequencing revealed substantial variation in gene content, even among closely related isolates, and exometabolomic profiling showed distinct metabolic responses to media supplemented with drought- versus well-watered root tissue. Traits linked to drought survival, including osmotic stress tolerance, siderophore production, and carbon utilization, varied widely among isolates and were not phylogenetically conserved. Using a broader panel of 48 Streptomyces, we demonstrate that DE scores, determined through mono-association experiments in gnotobiotic sorghum systems, showed high variability and lacked correlation with plant growth promotion. Pangenome-wide association identified orthogroups involved in osmolyte transport (e.g., proP) and membrane biosynthesis (e.g., fabG) as positively associated with DE, though most associations lacked phylogenetic signal. Collectively, these results demonstrate that Streptomyces DE is not a conserved genus-level trait but is instead strain-specific and functionally heterogeneous. Furthermore, DE in the root microbiome was shown not to predict beneficial effects on plant growth. This work underscores the need to resolve functional traits at the strain level and highlights the complexity of microbe-host-environment interactions under abiotic stress.

Fonseca-Garcia, Citlali↗
NASA NTRSDate not supplied

Validation of Remotely Sensed and Modeled Soil Moisture at Forested and Unforested Sites

Soil moisture is an important driver for forest ecosystems, influencing fire occurrence and extent, insect and pathogen impacts, and tree growth, which creates a need for regular, globally extensive soil moisture information that only satellite-based sensors or models can achieve. However, the reliability of soil moisture measurements in forests is not well understood due to a lack of suitable validation sites (especially relative to unforested ecosystems) and interference caused by high vegetation water content on remotely sensed measurements; although recent studies have started to address this gap [1], [2], [3], [4]. Here we validate the performance of multiyear remotely sensed (SMAP/Sentinel), remotely sensed data assimilation modelled (SMAP-L4), and modelled (NLDAS) surface and root zone (0-1 m) soil moisture datasets with data from in-situ sensors at 39 National Ecological Observatory Network (NEON) sites throughout the contiguous US. Due to differences in spatial resolution, NEON soil moisture (~0.2 km measurement zone) correlations were expected to be stronger with the SMAP/Sentinel product (3 km resolution) than with coarser resolution SMAP-L4 (9 km resolution) or NLDAS products (13 km resolution). However, given the sensitivity of satellite measurements to vegetation water content we expected a deterioration in the correlations based on remotely sensed measurements (SMAP/Sentinel and SMAP-L4) as aboveground biomass increased, whereas the model-based data (NLDAS) was expected to be largely insensitive to vegetation type. We recognize that the SMAP/Sentinel product was developed for unforested regions, therefore our application is outside its primary use case. Soil moisture is measured at up to 8 depths in five soil plots spaced up to 40 m apart at each NEON terrestrial site. Correlation parameters were calculated for the three remotely sensed and modelled data products relative to in-situ measurement following Entekhabi et al. [5]. The datasets comprised 94 (SMAP-L4), 28 (SMAP/Sentinel), and 106 (NLDAS) sites-years for surface soils and 13 (SMAP-L4) and 14 (NLDAS) site-years for the root zone. At unforested sites, the performance of the three remotely sensed and modelled data products was similar for surface soils (Table 1). For example, unbiased RMSD (ubRMSD), which SMAP uses as its primary performance metric [6], ranged from 0.05 to 0.06 m3 m-3 (Table 1), indicating the ability of all three products to track changes in soil moisture over time. The performance of the three products deteriorated at forested sites, however, while the difference in performance was modest for SMAP-L4 and NLDAS, the deterioration in SMAP/Sentinel performance was substantial. For instance, SMAP/Sentinel ubRMSD increased from 0.06 to 0.11 m3 m-3 and absolute mean difference (Abs MD; which includes measurement bias and spatial representativeness errors) increased from 0.06 to 0.16 m3 m-3, indicating both a reduction in ability to track temporal changes and absolute amounts of soil moisture in forest ecosystems. SMAP-L4 and NLDAS had lower unbiased RMSD for root zone (0-1 m) than surface soils at both forested and unforested sites (Tables 1 and 2; SMAP/Sentinel does not produce a root zone measurement). However, in most cases the correlation coefficient (r) was lower for the root zone than surface soils, suggesting the lower unbiased RMSD may be attributed to greater temporal stability of soil moisture in the root zone rather than improved data product performance. Mean difference and absolute mean difference, which encompass measurement bias and spatial representativeness errors, were greater for root zone than surface soils at unforested sites for both data products, but the opposite was generally true at forested sites. As with surface soils, there was relatively little change in the performance of SMAP-L4 and NLDAS between the unforested and forested sites. In summary, all three data products were able to adequately represent soil moisture at unforested sites, at least when aggregating across sites. However, while the performance of all three products deteriorated at forested sites, SMAP-L4 and NLDAS maintained sufficient performance to remain suitable for some use cases (ubRMSD <0.06 m3 m-3 and RMSD <0.13 m3 m-3). In contrast, the relatively poorer performance of the SMAP/Sentinel product at forested sites seems insufficient for most use cases (ubRMSD >0.1 m3 m-3 and RMSD >0.2 m3 m-3). We attribute the large reduction in the performance of the SMAP/Sentinel product in forests to its use of C-band wavelengths, which are particularly sensitive to vegetation interference, and apparently outweighed any gains provided by its higher spatial resolution. A combined SMAP/NISAR soil moisture product may provide improved performance relative to SMAP/Sentinel due to NISAR’s use of L-band wavelengths, which are less sensitive to vegetation (NISAR is scheduled for launch in early 2024).

Edward Ayres↗