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At least 289 records · Page 16

The 'Baldwin Effect' in Wolf-Rayet stars

The equivalent widths of a number of emission lines in the spectra of WN-type Wolf-Rayet stars are found to inversely correlate with the luminosity of the underlying continuum. This is the well-known Baldwin Effect that has previously been observed in quasars and some Seyfert I galaxies. The Effect can be inferred from line and continuum predictions in published non-LTE model helium atmospheres and is explainable in terms of differences in wind density among WN stars. Using a simple wind model, we show that the Effect arises from the fact that both the effective radius for the local continuum and the emission measure of the layers above the continuum-forming region depend on the density in the wind. The Effect provides a new method for distance determinations of W-R stars.

Morris, Patrick↗

Adaptive hyperparameter updating for training restricted Boltzmann machines on quantum annealers

Restricted Boltzmann Machines (RBMs) have been proposed for developing neural networks for a variety of unsupervised machine learning applications such as image recognition, drug discovery, and materials design. The Boltzmann probability distribution is used as a model to identify network parameters by optimizing the likelihood of predicting an output given hidden states trained on available data. Training such networks often requires sampling over a large probability space that must be approximated during gradient based optimization. Quantum annealing has been proposed as a means to search this space more efficiently which has been experimentally investigated on D-Wave hardware. D-Wave implementation requires selection of an effective inverse temperature or hyperparameter (β) within the Boltzmann distribution which can strongly influence optimization. Here, we show how this parameter can be estimated as a hyperparameter applied to D-Wave hardware during neural network training by maximizing the likelihood or minimizing the Shannon entropy. We find both methods improve training RBMs based upon D-Wave hardware experimental validation on an image recognition problem. Neural network image reconstruction errors are evaluated using Bayesian uncertainty analysis which illustrate more than an order magnitude lower image reconstruction error using the maximum likelihood over manually optimizing the hyperparameter. The maximum likelihood method is also shown to out-perform minimizing the Shannon entropy for image reconstruction.

97 MATHEMATICS AND COMPUTING↗

Cytogenetic follow-up studies on humans with internal and external exposure to ionizing radiation

Cells exposed to ionizing radiation have a wide spectrum of DNA lesions that include DNA single-strand breaks, DNA double-strand breaks (DSBs), oxidative base damage and DNA-protein crosslinks. Among them, DSB is the most critical lesion, which when mis-repaired leads to unstable and stable chromosome aberrations. Currently, chromosome aberration analysis is the preferred method for biological monitoring of radiation-exposed humans. Here, stable chromosome aberrations, such as inversions and balanced translocations, persist in the peripheral blood lymphocytes of radiation-exposed humans for several years and, therefore, are potentially useful tools to prognosticate the health risks of radiation exposure, particularly in the hematopoietic system. In this review, we summarize the cytogenetic follow-up studies performed by REAC/TS (Radiation Emergency Assistance Center/Training site, Oak Ridge, USA) on humans exposed to internal and external radiation. In the light of our observations as well as the data existing in the literature, this review attempts to highlight the importance of follow-up studies for predicting the extent of genomic instability and its impact on delayed health risks in radiation-exposed victims.

61 RADIATION PROTECTION AND DOSIMETRY↗

Optimal experimental design for prediction based on push-forward probability measures

Incorporating experimental data is essential for increasing the credibility of simulation-aided decision making and design. This paper presents a method which uses a computational model to guide the optimal acquisition of experimental data to produce data-informed predictions of quantities of interest (QoI). Many strategies for optimal experimental design (OED) select data that maximize some utility that measures the reduction in uncertainty of uncertain model parameters, for example the expected information gain between prior and posterior distributions of these parameters. In this paper, we seek to maximize the expected information gained from the pushforward of an initial (prior) density to the push-forward of the updated (posterior) density through the parameter-to-prediction map. The formulation presented is based upon the solution of a specific class of stochastic inverse problems which seeks a probability density that is consistent with the model and the data in the sense that the push-forward of this density through the parameter-to-observable map matches a target density on the observable data. While this stochastic inverse problem forms the mathematical basis for our approach, we develop a one-step algorithm, focused on push-forward probability measures, that leverages inference-for-prediction to bypass constructing the solution to the stochastic inverse problem. A number of numerical results are presented to demonstrate the utility of this optimal experimental design for prediction and facilitate comparison of our approach with traditional OED.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Three-dimensional analysis of surface crack-Hertzian stress field interaction

The results are presented of a stress intensity factor analysis of semicircular surface cracks in the inner raceway of an engine bearing. The loading consists of a moving spherical Hertzian contact load and an axial stress due to rotation and shrink fit. A 3-D linear elastic Boundary Element Method code was developed to perform the stress analysis. The element library includes linear and quadratic isoparametric surface elements. Singular quarter point elements were employed to capture the square root displacement variation and the inverse square root stress singularity along the crack front. The program also possesses the capability to separate the whole domain into two subregions. This procedure enables one to solve nonsymmetric fracture mechanics problems without having to separate the crack surfaces a priori. A wide range of configuration parameters was investigated. The ratio of crack depth to bearing thickness was varied from one-sixtieth to one-fifth for several different locations of the Hertzian load. The stress intensity factors for several crack inclinations were also investigated. The results demonstrate the efficiency and accuracy of the Boundary Element Method. Moreover, the results can provide the basis for crack growth calculations and fatigue life prediction.

Ballarini, R.↗

The Examination of Individual Factors and AFTE Training Outcomes

Introduction: Motion sickness is common among military aviators. It describes a specific group of symptoms that include epigastric awareness, nausea, pallor, sweating, salivation, and fatigue. Occurrences of these symptoms can pose a significant risk to safety and adversely impact mission success. Accordingly, researchers have developed specific interventions to act as countermeasures. For example, Autogenic Feedback Training Exercise has been empirically validated as a training method that mitigates the impact of motion sickness. However, it remains unclear the extent to which individual factors moderate (or mediate) the effects of this intervention. The examination of individual factors such as interoceptive accuracy (IA) and specific personality traits might provide insight into whom may benefit most from AFTE. Methods: Participants were administered the Big Five Inventory (BFI) and State Trait Anxiety Inventory (STAI). In addition, they were given an interoceptive accuracy task (i.e., heartbeat counting task). The participants’ reported value was then compared to the actual number of heart beats obtained via ECG. Completion of the IA task was followed by pre- AFTE and Post-AFTE rotating chair tests to evaluate motion sickness and the effects of AFTE training. Results: Participants (n=16) were evaluated on IA, personality factors (i.e., BFI & STAI) and performance on the rotating chair. IA was unrelated to personality traits (p > .05), but inversely related to state anxiety post training (p < .05). Finally, IA did not predict performance (i.e., rotations or minutes tolerated ?) on rotating chair F (1, 14) = 1.18, p> .05). Discussion:(1) IA is unrelated to personality traits as measured by BFI and STAI. (2) Individual factors are unrelated to AFTE training outcome. (3) AFTE training can be beneficial for all.

motion sickness↗

Equilibrium carbon isotope fractionation factors of hydrocarbons: Semi-empirical force-field method

Here, we have calculated the reduced partition function ratios for carbon isotopes (β-factor) of 67 hydrocarbons (alkanes, alkenes, alkynes, cycloalkanes, and aromatics), including their 267 single-substituted isotopomers. The calculations were performed using the harmonic oscillator – rigid rotator model and the Urey / Bigeleisen-Mayer approach. Normal frequencies of molecular vibrations of the isotopologues were calculated from the molecular structures data and valence field force constants stored in the Light-handled Elucidation of Vibrations (LEV) database elaborated by Dr. Gribov and his colleagues in Russia. The LEV database is constructed from experimental spectroscopic and structural data by solving inverse problems of molecular vibrations. The LEV is internally consistent and the most comprehensive database available to date. The β-factor were calculated in the temperature range of 200–800 K with a 10 K step. Our calculations predict that the β-factors increase with an increasing number of C atoms within the same groups of hydrocarbons (e.g., alkanes). Our calculations also show a general descending order of 13 C enrichments among the different groups of hydrocarbons: cycloalkanes, aromatics, alkenes (double bonds) and isoalkanes, alkanes, alkynes (triple bonds). Position-specific, intramolecular isotope effects within hydrocarbons are determined by the β-factors of C in the different functional groups in the order: quaternary (C), tertiary (methine, CH), secondary (methylene, CH 2 ), primary (methyl, CH 3 ) and double bond (C=C), saturated bond (C - C), triple bond (HC≡). Our calculations on bulk and position-specific carbon isotope β-factors of the hydrocarbons, which are generally consistent with very limited ab initio calculations in the literature, are internally consistent and the most comprehensive to date for future applications to position-specific isotope geochemistry of hydrocarbons.

58 GEOSCIENCES↗

An implicit marching procedure for the treatment of supersonic flow fields using the conservative full potential equation

A new aerodynamic prediction technique based on the conservative full potential equation is developed for the treatment of supersonic flow fields. This new technique bridges the gap between simplistic linear theory methods and complex Euler solvers. A novel local density linearization concept and a second order accurate retarded density scheme, both producing the correct artificial viscosity, are introduced in developing an implicit marching scheme for solving the scalar phi. The method produces results that compare well with Euler solvers and requires an order of magnitude less computer time and significantly less computer memory over existing nonlinear codes. The scalar phi formulation can be extended to handle subsonic pockets in the marching direction and also is suitable for developing inverse procedures where the shape corresponding to a prescribed loading is sought.

Shankar, V.↗

MOOSE ProbML: Parallelizable Probabilistic Machine Learning and Uncertainty Quantification Capabilities

The Multiphysics Object Oriented Simulation Environment (MOOSE) is a widely used open- source finite element software for performing multiphysics multiscale simulations in a massively parallel fashion. Recently, the computational team at Idaho National Laboratory (INL) has implemented Probabilistic Machine Learning (ProbML) capabilities in MOOSE—in a parallelized fashion—and enable active learning with large-scale computational models for tasks such as surrogate model development, scale bridging, forward/inverse uncertainty quantification (UQ), Bayesian optimization, etc. This presentation summarizes these developments in MOOSE along with demonstrations on several real applications relevant to nuclear energy. At the fundamental level, samplers like Monte Carlo/Latin Hypercube, variance reduction, parallelized Markov Chain Monte Carlo (MCMC) support uncertainty propagation in both forward and inverse settings. These samplers can be integrated with the Gaussian processes (GP) suite in MOOSE, which offer several variants like scalar GPs, multi-output GPs, and deep GPs, to enable active learning. These GPs can be tuned using gradient-based optimization methods like Adam and its variants or gradient-free methods like the elliptical slice sampler (a variant of MCMC adept under Gaussian settings) for more complex covariance kernels or likelihoods whose gradient computations can be cumbersome. A variety of batch acquisition functions permit parallelized evaluation of the computational model and support different learning objectives with high efficiency like Bayesian inference, global surrogate development, optimization, etc. Furthermore, libtorch integration supports training, evaluation, and re-training of neural networks and other complex machine learning models in active learning settings. The impacts of these developments are shown on several real applications: (1) nuclear fuel inverse UQ and model inadequacy assessment using the Kennedy O’Hagan framework; (2) uncertainty aware surrogate modeling for additive manufacturing to predict field quantities; (3) nuclear reactor rare events analysis; and (4) complex fluid flow prediction using a global surrogate with quantified prediction uncertainty. Finally, the outlook of MOOSE ProbML is discussed for both outer-loop and inner-loop computations in the broad view to accelerate fuels and materials qualification, address gaps in knowledge and data, and assess new reactor/fuel systems.

11 - NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Acoustic performance of inlet suppressors on an engine generating a single mode

As part of a program to evaluate an inlet suppressor design method based on mode cutoff ratio, three single degree of freedom liners with different open area ratio face sheets were designed for a single spinning mode. This mode was generated by placing 41 rods in front of the 28 blade fan of a JT15D turbofan engine. At the liner design this near cutoff mode has a theoretical maximum attenuation of nearly 200 dB per L/D. The data show even higher attenuations at the design condition than predicted by the theory for dissipation of a single mode within the liner. This additional attenuation is large for high open area ratios and should be accounted for in the theory. The data shows the additional attenuation to be inversely proportional to acoustic resistance. It was thought that the additional attenuation could be caused by reflection and modal scattering at the hard to soft wall interface. A reflection model was developed, and then modified to fit the data. This model was checked against independent (multiple pure tone) data with good agreement.

Heidelberg, L. J.↗

On discriminating tokamak sawtooth crash models via localized density and temperature measurements

The core electron temperature drops rapidly during the sawtooth crash in tokamak plasmas, which causes heat loss and may lead to fast particle losses or even a disruption. Several models have been proposed for the periodic crash, including the Kadomtsev model with magnetic reconnection and the quasi-interchange model with the growth of higher-mode-number pressure-driven instabilities. 3D MHD simulations were performed for these two models with a goal to develop intuition and to predict qualitatively how different types of sawtooth will appear in various diagnostics. The structures of electron density ne and electron temperature Te show a dominant (1, 1) mode for the Kadomtsev case and a dominant (4, 4) mode for the quasi-interchange case. The oscillations of ne and Te have a positive correlation near the inversion layer for both cases, while their frequencies and amplitudes are different depending on the dominant modes. Particularly, for the Kadomtsev case, we find a relation between the amount of flux reconnected during a sawtooth event and ne or Te oscillations. Therefore, we connect recently developed measurement capabilities for ne and Te to the internal sawtooth behavior. We propose that this method of analysis can help in identifying the type of sawtooth in future experiments augmented by simulations.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Understanding protein-complex assembly through grand canonical maximum entropy modeling

Inside a cell, heterotypic proteins assemble in inhomogeneous, crowded systems where the abundance of these proteins vary with cell types. While some protein complexes form putative structures that can be visualized with imaging, there are far more protein complexes that are yet to be solved because of their dynamic associations with one another. Nevertheless, it is possible to infer these protein complexes through a physical model. However, it is often not clear to physicists what kind of data from biology is necessary for such a modeling endeavor. Here, we aim to model these clusters of coarse-grained protein assemblies from multiple subunits through the constraints of interactions among the subunits and the chemical potential of each subunit. We obtained the constraints on the interactions among subunits from the known protein structures. We inferred the chemical potential that dictates the particle number distribution of each protein subunit from the knowledge of protein abundance from experimental data. Guided by the maximum entropy principle, we formulated an inverse statistical mechanical method to infer the distribution of particle numbers from the data of protein abundance as chemical potentials for a grand canonical multicomponent mixture. Using grand canonical Monte Carlo simulations, we captured a distribution of high-order clusters in a protein complex of succinate dehydrogenase with four known subunits. The complexity of hierarchical clusters varies with the relative protein abundance of each subunit in distinctive cell types such as lung, heart, and brain. When the crowding content increases, we observed that crowding stabilizes emergent clusters that do not exist in dilute conditions. We, therefore, proposed a testable hypothesis that the hierarchical complexity of protein clusters on a molecular scale is a plausible biomarker of predicting the phenotypes of a cell.

59 BASIC BIOLOGICAL SCIENCES↗

Leveraging the Gravity Field Spectrum for Icy Satellite Interior Structure Determination: The case of Europa with the Europa Clipper Mission

Understanding the interior structures of icy moons is pivotal for addressing their origins and habitability. We introduce an approach employing the gravity field spectrum as an additional constraint for the inversion of differentiated icy bodies' interior structures. After developing the general methodology, we apply it to Europa, utilizing the predicted measurement capability of NASA's Europa Clipper mission, and we prove its effectiveness in resolving key geophysical parameters. Notably, we show that using the gravity field spectrum in combination with the mass and moment of inertia of the body allows us to estimate, depending on the considered end-member interior structure, the hydrosphere thickness with 4–20 km uncertainty and reliably determine the seafloor maximum topographic range and elastic thickness to within 100–600 m and 5–15 km, respectively, together with the power–degree relationship of the seafloor topography. We also show that the proposed method allows us to determine the density of the silicate mantle and the radius of the core to within 0.25 g cc −1 and 50 km, respectively.

G. Cascioli↗

Topological Circular Dichroism in Chiral Multifold Semimetals

Uncovering the physical contents of the nontrivial topology of quantum states is a critical problem in condensed matter physics. Here, we study the topological circular dichroism in chiral semimetals using linear response theory and first-principles calculations. We show that, when the low-energy spectrum respects emergent SO(3) rotational symmetry, topological circular dichroism is forbidden for Weyl fermions, and thus is unique to chiral multifold fermions. This is a result of the selection rule that is imposed by the emergent symmetry under the combination of particle-hole conjugation and spatial inversion. Using first-principles calculations, we predict that topological circular dichroism occurs in CoSi for photon energy below about 0.2 eV. In conclusion, our Letter demonstrates the existence of a response property of unconventional fermions that is fundamentally different from the response of Dirac and Weyl fermions, motivating further study to uncover other unique responses.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Impact of thermodynamic fluctuations and pattern size on the nucleation behavior during area selective deposition

In this work, the authors explore the impact that thermodynamic fluctuations have on the spontaneous appearance of defects during area selective deposition on patterned surfaces that are fully covered by adsorbates under local thermodynamic equilibrium, such as self-assembled monolayers. By using a simple lattice gas model for the adsorbed monolayer, the authors were able to track the spontaneous formation of defects in the monolayer as a function of the pattern width. The results indicate that, for pattern widths of the order of tens of nanometers, roughening effects at the pattern edge can be the leading source for the spontaneous appearance of nucleation defects. This leads to an enhancement of the density of defects that can be up to three orders of magnitude higher than those expected in uniform (not patterned) surfaces. The model also predicts a density of defects that is inversely proportional to the pattern width. Finally, if the dynamic nucleation of defects during area selective deposition is driven by thermodynamic fluctuations, the model predicts that the nucleation rate should be proportional to the total precursor fluency and independent of purge times. Moreover, a tight confinement of the monolayer through a high quality smooth interface in the patterned substrate and strong cohesive interactions between adsorbates should each contribute to a reduction of the overall defect density.

36 MATERIALS SCIENCE↗

Knowledge-informed deep learning for hydrological model calibration: an application to Coal Creek Watershed in Colorado

Abstract. Deep learning (DL)-assisted inverse mapping has shown promise in hydrological model calibration by directly estimating parameters from observations. However, the increasing computational demand for running the state-of-the-art hydrological model limits sufficient ensemble runs for its calibration. In this work, we present a novel knowledge-informed deep learning method that can efficiently conduct the calibration using a few hundred realizations. The method involves two steps. First, we determine decisive model parameters from a complete parameter set based on the mutual information (MI) between model responses and each parameter computed by a limited number of realizations (∼50). Second, we perform more ensemble runs (e.g., several hundred) to generate the training sets for the inverse mapping, which selects informative model responses for estimating each parameter using MI-based parameter sensitivity. We applied this new DL-based method to calibrate a process-based integrated hydrological model, the Advanced Terrestrial Simulator (ATS), at Coal Creek Watershed, CO. The calibration is performed against observed stream discharge (Q) and remotely sensed evapotranspiration (ET) from the water year 2017 to 2019. Preliminary MI analysis on 50 realizations resulted in a down-selection of 7 out of 14 ATS model parameters. Then, we performed a complete MI analysis on 396 realizations and constructed the inverse mapping from informative responses to each of the selected parameters using a deep neural network. Compared with calibration using observations covering all time steps, the new inverse mapping improves parameter estimations, thus enhancing the performance of ATS forward model runs. The Nash–Sutcliffe efficiency (NSE) of streamflow predictions increases from 0.53 to 0.8 when calibrating against Q alone. Using ET observations, on the other hand, does not show much improvement on the performance of ATS modeling mainly due to both the uncertainty of the remotely sensed product and the insufficient coverage of the model ET ensemble in capturing the observation. By using observed Q only, we further performed a multiyear analysis and show that Q is best simulated (NSE > 0.8) by including in the calibration the dry-year flow dynamics that show more sensitivity to subsurface characteristics than the other wet years. Moreover, when continuing the forward runs till the end of 2021, the calibrated models show similar simulation performances during this evaluation period as the calibration period, demonstrating the ability of the estimated parameters in capturing climate sensitivity. Our success highlights the importance of leveraging data-driven knowledge in DL-assisted hydrological model calibration.

54 ENVIRONMENTAL SCIENCES↗

Progress in the prediction of unsteady heat transfer on turbines blades

Progress toward developing a general method for predicting unsteady heat transfer on turbine blades subject to blade-passing frequencies and Reynolds numbers relevant to the Space Shuttle Main Engine (SSME) is discussed. The method employs an invisid/viscous interactive procedure which has been tested extensively for steady subsonic and transonic external airfoil problems. One such example is shown. The agreement with experimental data and with Navier-Stokes calculations yields confidence in the method. The technique is extended to account for wake generated unsteadiness. The flow reversals around the stagnation point caused by the nonuniform onset velocity are accounted for by using the Characteristic Box scheme developed by Cebeci and Stewartson. The coupling between the inviscid and viscous methods is achieved by using a special procedure, which, with a novel inverse finite-difference boundary-layer method, allows the calculations to be performed for a wide range of flow conditions, including separation. Preliminary results are presented for the stagnation region of turbine blades for both laminar and turbulent flows. A laminar model problem corresponding to a flow on a circular cylinder which experiences the periodic passing of wakes from turbine blades is presented to demonstrate the ability of the method to calculate flow reversals around the stagnation region.

Cebeci, T.↗

Toward Robust and Routine Determination of Mw for Small Earthquakes: Application to the 2020 Mw 5.7 Magna, Utah, Seismic Sequence

To better characterize seismic hazard, particularly, for induced seismicity, there is an increasing interest in methods to estimate moment magnitude (M w ) for small earthquakes. M w is generally preferred over other magnitude types, but, it is difficult to estimate M w for earthquakes with local magnitude (M L ) <3-3.5, using conventional moment tensor (MT) inversion. The 2020 M ww 5.7 Magna, Utah, seismic sequence provides an opportunity to illustrate and evaluate the value of spectral methods for this purpose. Starting with a high-quality seismic catalog of 2103 earthquakes (M L <5.6), we estimate M w using two independent spectral methods—one based on direct waves, yielding M w,direct , and the other based on coda waves, yielding M w,coda . For the direct-wave method, we present a non-parametric (NP) inversion scheme that solves for apparent geometrical spreading, G(R), and site effects (S), similar to other NP procedures that have been used to calibrate regional M L scales. The NP inversion is constrained using M ws derived from MTs for nine events in the Magna sequence. We recover statistically robust and physically reasonable G(R) and S and compute M w,direct for 635 Magna earthquakes down to M L 0.7. For the coda-wave method, we consider two separate calibration schemes involving previous MT solutions and compute M w,coda for 311 earthquakes down to M L 1.0. For 280 of the events that were processed with both methods—M w,direct and M w,coda —are strongly correlated (r = 0.98), with a mean difference of only 0.05. We compare M w,direct and M w,coda with M L and find reasonably good agreement for M L <3.6 with the theoretically predicted relationship of M w =(2/3)M L +C, in which C is a regional constant. Our results imply that seismic network operators can use spectral-based M w estimates to replace M L estimates for events with M L ≥1.0, and possibly smaller. The main requirement is the existence of a small number of MT solutions for calibration purposes.

58 GEOSCIENCES↗