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At least 289 records · Page 16
All sourcesNASA NTRSDOE OSTI
DOE OSTI2026

SPRUCE FT-ICR MS, Bulk Chemistry, and Mass Loss from Litter Decomposition Study in Experimental Plots, Marcell Experimental Forest, Minnesota, 2015-2017

This dataset contains molecular, bulk chemical, and mass loss measurements from a litter decomposition study at the Spruce and Peatland Responses Under Changing Environments (SPRUCE) experimental site within the Marcell Experimental Forest in northern Minnesota, USA. This site is in a Sphagnum spp. ombrotrophic bog forest. Litterbags were deployed into the peat in September 2015 across three warming levels (+0, +4.5, and +9°C) under ambient and elevated carbon dioxide (CO₂ - +500 ppm) and retrieved after roughly 0.5, 1, and 2 years of field incubation (2015-09-23 to 2017-08-02). Litterbags containing six peatland litter types: black spruce needles (Picea mariana - SPL), spruce fine roots (SPR), Sphagnum angustifolium (ANG), Sphagnum magellanicum (MAG), Labrador tea leaves (Rhododendron groenlandicum - LTL), and Labrador tea roots (LTR). Molecular composition of water-soluble organic matter extracts was characterized using Fourier Transform Ion Cyclotron Resonance Mass Spectrometry (FT-ICR MS) at 9.4 Tesla, operated in negative ion mode with electrospray ionization, providing molecular formula assignments and compound-class distributions across the decomposition time series. Bulk chemical characterization included elemental analysis (percent carbon, nitrogen, and phosphorus) and Fourier Transform Infrared Spectroscopy (FTIR) to quantify functional group composition. Litter mass loss was tracked gravimetrically at each retrieval interval, expressed as percent mass remaining relative to initial dry mass for each litter type and treatment combination. These data are valuable for understanding how vegetation shifts driven by increased atmospheric CO2 and temperature in peatlands alter litter inputs and organic matter stabilization trajectories, with implications for projecting and modeling peatland carbon cycling. This dataset contains two data files in comma-separated value (.csv) format. Additional metadata are provided: two data dictionaries and a file-level metadata file in comma separate (.csv) format and a user guide in PDF (*.pdf) format.

decomposition↗
DOE OSTI2026

AmeriFlux FLUXNET-1F US-Dk1 Duke Forest-open field

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Dk1 Duke Forest-open field. This is the FLUXNET version of the carbon flux data for the site US-Dk1 Duke Forest-open field produced by applying the standard ONEFlux (1F) software. Site Description - The Duke Forest grass field is approximately 480×305 m, dominated by the C3 grass Festuca arundinacea Shreb. (tall fescue) includes minor components of C3 herbs and the C4 grass Schizachyrium scoparium (Michx.) Nash, not considered here. The site was burned in 1979 and is mowed annually during the summer for hay according to local practices. Lai, C.T. and G.G. Katul, 2000, "The dynamic role of root-water uptake in coupling potential to actual transpiration" , Advances in Water Resources, 23, 427-439; Novick , K.A., P. C. Stoy, G. G. Katul, D. S. Ellsworth, M. B. S. Siqueira, J. Juang, R. Oren, 2004, Carbon dioxide and water vapor exchange in a warm temperate grassland, Oecologia, 138, 259-274; Stoy PC, Katul GG, Siqueira MBS, Juang J-Y, McCarthy HR, Oishi AC, Uebelherr JM, Kim H-S, Oren R (2006). Separating the effects of climate and vegetation on evapotranspiration along a successional chronosequence in the southeastern U.S. Global Change Biology 12:2115-2135

Oishi, Chris [USDA Forest Service]↗
DOE OSTI2026

AmeriFlux FLUXNET-1F US-Dk2 Duke Forest-hardwoods

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Dk2 Duke Forest-hardwoods. This is the FLUXNET version of the carbon flux data for the site US-Dk2 Duke Forest-hardwoods produced by applying the standard ONEFlux (1F) software. Site Description - private land adjacent to the Duke Forest in November 2002

Oishi, Chris [USDA Forest Service]↗
DOE OSTI2026

AmeriFlux FLUXNET-1F US-Dk3 Duke Forest - loblolly pine

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Dk3 Duke Forest - loblolly pine. This is the FLUXNET version of the carbon flux data for the site US-Dk3 Duke Forest - loblolly pine produced by applying the standard ONEFlux (1F) software. Site Description - The site was established in 1983 following a clear cut and a burn. Pinus taeda L. (loblolly pine) seedlings were planted at 2.4m by 2.4m spacing and ecosystem development has not been managed after planting. Canopy height increased from 16m in 2001 to 18m in 2004. The canopy is comprised primarily of P. taeda with some emergent Liquidambar styraciflua L. and a diverse and growing understory with 26 different woody species of diameter breast height 42.5 cm. The flux tower lies upwind of the CO2-enriched components of the free atmosphere carbon enrichment (FACE) facility located in the same pine forest. EC instrumentation is at 20.2m on a 22m tower.

Oishi, Chris [USDA Forest Service]↗
DOE OSTI2026

AmeriFlux FLUXNET-1F US-HRC Humnoke Farm Rice Field – Field C

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-HRC Humnoke Farm Rice Field – Field C. This is the FLUXNET version of the carbon flux data for the site US-HRC Humnoke Farm Rice Field – Field C produced by applying the standard ONEFlux (1F) software. Site Description - Conventional flood irrigation method on a rice field under continuous rice operation for 50 years

Reba, Michele L. [USDA, ARS, DELTA WATER MANAGEMEN↗
DOE OSTI2026

AmeriFlux FLUXNET-1F US-Cwt Coweeta

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Cwt Coweeta. This is the FLUXNET version of the carbon flux data for the site US-Cwt Coweeta produced by applying the standard ONEFlux (1F) software. Site Description - Mature, secondary, deciduous-dominated forest. Located in southern Appalachian mountains, cove location, near base of forested catchment. Proximity close to USFS Coweeta Hydrologic Laboratory offices. Forest harvesting until early 1930s, unmanaged since.

Oishi, A. Christopher [USDA Forest Service]↗
DOE OSTI2026

AmeriFlux FLUXNET-1F US-LS1 San Pedro River Lewis Springs Sacaton Grassland

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-LS1 San Pedro River Lewis Springs Sacaton Grassland. This is the FLUXNET version of the carbon flux data for the site US-LS1 San Pedro River Lewis Springs Sacaton Grassland produced by applying the standard ONEFlux (1F) software. Site Description - This is a riparian grassland located along an old alluvial terrace along the banks of the entrenched San Pedro River in southeastern Arizona. Site climate is semiarid with monsoonal (Jul-Sep) rainfall. The grasses access groundwater (depth of 2-4 m)from an alluvial aquifer recharged elsewhere. Site water balance is not closed and ET greatly exceeds precipitation. The perennial bunchgrasses use both rainfall, groundwater and occasional flood water. This groundwater-using ecosystem is far more ebulliant and productive than the upland vegetation around it (shrublands and grasslands) outside of the San Pedro River corridor.

Scott, Russell [USDA-ARS]↗
DOE OSTI2026

AmeriFlux FLUXNET-1F US-OPE Optimizing Production Inputs for Economic and Environmental Enhancement (OPE3)

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-OPE Optimizing Production Inputs for Economic and Environmental Enhancement (OPE3). This is the FLUXNET version of the carbon flux data for the site US-OPE Optimizing Production Inputs for Economic and Environmental Enhancement (OPE3) produced by applying the standard ONEFlux (1F) software. Site Description - The Optimizing Production Inputs for Economic and Environmental Enhancement (OPE3) site is located at the Beltsville Agricultural Research Center in Prince George's County, MD, and consists of a 22-ha production field, with an adjacent riparian wetland and first-order stream. Scientists from several U.S. Federal agencies, universities (foreign and domestic), and private industry have conducted multidisciplinary research at this location since 1998.

Alfieri, Joe [USDA-ARS Hydrology and Remote Sensin↗
DOE OSTI2026

AmeriFlux FLUXNET-1F US-CMW Charleston Mesquite Woodland

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-CMW Charleston Mesquite Woodland. This is the FLUXNET version of the carbon flux data for the site US-CMW Charleston Mesquite Woodland produced by applying the standard ONEFlux (1F) software. Site Description - Site is a riparian mesquite woodland located along an old alluvial terrace along the banks of the San Pedro River in southeastern Arizona. Site climate is semiarid with monsoonal (Jul-Sep) rainfall. The mesquite trees access groundwater from an alluvial aquifer recharged elsewhere. Site water balance is not closed and ET greatly exceeds precipitation. The understory grasses and forbs are rainfall dependent. This groundwater-dependent ecosystem is far more ebulliant and productive than the upland vegetation around it (shrublands and grasslands).

Scott, Russell [USDA-ARS]↗
DOE OSTI2026

AmeriFlux US-LMS LMRB LTAR Schmidt Farm

This is the AmeriFlux version of the carbon flux data for the site US-LMS LMRB LTAR Schmidt Farm. Site Description - Agricultural field in MS Delta with cover crops and minimal tillage

Witthaus, Lindsey [USDA ARS]↗
DOE OSTI2026

AmeriFlux FLUXNET-1F US-Ho3 Howland Forest (harvest site)

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-Ho3 Howland Forest (harvest site). This is the FLUXNET version of the carbon flux data for the site US-Ho3 Howland Forest (harvest site) produced by applying the standard ONEFlux (1F) software. Site Description - Closed conifer forest, minimal disturbance. References: Fernandez et al. (1993), Canadian Journal of Soil Science 73 317-328. Hollinger et al. (1999), Global Change Biology 5: 891-902. Savage KE, Davidson EA (2001), Global Biogeochemical Cycles 15 337-350. Scott et al. (2004), Environmental Management, Vol. 33, Supplement 1, pp. S9-S22. Hollinger et al. (2004), Global Change Biology 10: 1689-1706.

Ouimette, Andrew [USDA Forest Service]↗
DOE OSTI2026

AmeriFlux FLUXNET-1F US-NR3 Niwot Ridge Alpine (T-Van West)

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-NR3 Niwot Ridge Alpine (T-Van West). This is the FLUXNET version of the carbon flux data for the site US-NR3 Niwot Ridge Alpine (T-Van West) produced by applying the standard ONEFlux (1F) software. Site Description - Snow-scoured alpine tundra; Dry meadow vegetation; 3-m tower located 50 m W of US-NR4, 420 m SW of US-xNW, and 28 km west of Boulder, CO, USA. Nearby reliable daily precipitation data (NWT D1) can be found at: https://doi.org/10.6073/pasta/63b912a406254df036e89c84a1b59230.

Knowles, John [USDA ARS Southwest Watershed Resear↗
DOE OSTI2025

Pore2Chip: All-in-one python tool for soil microstructure analysis and micromodel design

The Pore2Chip Python package is designed to create 2D micromodels using extracted data from 3D X-ray computed tomography (XCT) images. This package helps analyze soil structure and function, allowing for the investigation of hydro-biogeochemical processes that impact mineral extraction and reactivity, oxygen concentrations, and nutrient availability in disturbed or managed soils. Key metrics encompass pore size distributions, pore throat size distributions, and connectivity (pore coordination numbers). The final output is a 2D scalable SVG design representing a core or aggregate. Designs can be fabricated with methods such as laser etching, 3D printing, and photolithography.

lab-on-chip↗
DOE OSTI2023

Genetics and Genomics of Pathogen Resistance in Switchgrass (Final Report)

This project was funded by DOE under Grant no. DE-SC0016108. Originally approved for the 2016-2019 period, two no-cost extensions were solicited and approved, which prolonged the lifespan through July 2021. This final report informs on the results obtained so far from the research implemented. The research hinged on integrating genomics (genomic selection, RNAseq, virus-plant interactions) with classical genetics (conventional breeding) to incorporate durable resistance to fungal (rust) and viral (mosaic) diseases in switchgrass (Panicum virgatum) populations being bred for bioenergy. Higher biomass yield, higher quality (low lignin content), and durable disease resistance are key features to make lignocellulosic switchgrass feedstocks economically competitive and sustainable. Genomic selection is being applied on three generations of a switchgrass population derived from crossing two ecotypes (Kanlow as lowland female and Summer as upland male) with differential performance in terms of biomass yield and quality, disease resistance, and winter survivability. Target populations were screened for rust and mosaic in field and/or lab and phenotyped for biomass yield and quality traits. Genetic analyses were applied across generations to capture the joint inheritance of the targeted traits and predict breeding values for parents and progeny with greater accuracy. Parental and a panel of different switchgrass populations were genotyped with the DArTseq technology to develop SNP (0, 1, 2) and in-silico (presence/absence) DArT markers. Rust inoculations techniques were developed and applied successfully on switchgrass. The original populations (Kanlow and Summer) were sequenced with RNAseq to capture the gene expression profiles across sequential time-points and appraise the basis of greater resistance in the Kanlow vs the Summer ecotype. Constructs of PMV and sPMV mosaic virus were assembled and tested first on proso millet to find the best protocol to use later on switchgrass. Results from the preliminary analyses indicate that 1) ample additive genetic variation is available for selection and improving this inter-ecotypic population for yield, quality, and disease traits, 2) significant gains are to be expected with the genetic correlations being favorable between yield and lignin content and between yield and disease ratings, 3) substantial differences exist in the genetic regions controlling rust resistance in the two ecotypes, 4) co-infection with PMV isolates from Nebraska and its satellite from Kansas elicit severe mosaic symptoms, and 5) two different genetic systems are responsible for imparting resistance to rust and virus in switchgrass.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

Sustainable Herbaceous Energy Crop Production in the Southeast United States

This project aims to develop a comprehensive assessment of the economic viability and environment sustainability of energycane and biomass sorghum for bioenergy development in the southeast United States. Data on biomass production, economics, and environmental sustainability of energycane and biomass sorghum were collected across four states (Texas, Louisiana, Georgia, and Florida) in multi-year field experiments. Comprehensive data analyses were conducted to address 13 subject areas

09 BIOMASS FUELS↗