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At least 289 records · Page 16

Mass spectrometry.

Review of the current state of mass spectrometry, indicating its unique importance for advanced scientific research. Mass spectrometry applications in computer techniques, gas chromatography, ion cyclotron resonance, molecular fragmentation and ionization, and isotope labeling are covered. Details are given on mass spectrometry applications in bio-organic chemistry and biomedical research. As the subjects of these applications are indicated alkaloids, carbohydrates, lipids, terpenes, quinones, nucleic acid components, peptides, antibiotics, and human and animal metabolisms. Particular attention is given to the mass spectra of organo-inorganic compounds, inorganic mass spectrometry, surface phenomena such as secondary ion and electron emission, and elemental and isotope analysis. Further topics include mass spectrometry in organic geochemistry, applications in geochronology and cosmochemistry, and organic mass spectrometry.

Burlingame, A. L.↗

Dust counter and mass analyser (DUCMA) measurements of comet Halley's coma from Vega spacecraft

Measurements of dust particles in comet Halley's coma from Vega spacecraft made with instruments using a new principle of dust detection and having a high time resolution over a large range of dust fluxes and masses are reported. The dust coma, whether quiescent (as seen by Vega 2) or containing a major jet structure, (as seen by Vega 1) displays large, short-term variations throughout which are at times quasi-periodic. The integral mass spectra increase in intensity to the lowest masses measured, and the flux levels lie approximately in the ranges estimated previously from ground-based observations. The coma is highly dynamical on all spatial and temporal scales, suggesting a complex structure of localized regions of dust emission from the nucleus.

Simpson, J. A.↗

Coupling of a High-Resolution Ambient Pressure Drift Tube Ion Mobility Spectrometer to a Commercial Time-of-flight Mass Spectrometer

Ion mobility spectrometry provides information about molecular structures of ions. Hence, high resolving power allows separation of isomers which is of major interest in several applications. In this work, we couple our high-resolution ion mobility spectrometer (IMS) with a resolving power of R{sub p} = 100 to a time-of-flight mass spectrometer (TOF-MS). Besides, the benefit of an increased resolving power such an IMS-MS also helps analyzing and understanding the ionization processes in IMS. Usually, the coupling between IMS and TOF-MS is realized by synchronizing data acquisition of the IMS and MS resulting in two-dimensional data containing ion mobility and mass spectra. However, due to peak widths of less than 100 μs in our high-resolution IMS, this technique is not practicable due to significant peak broadening during the ion transfer into the MS and an insufficient data acquisition rate of the MS. Thus, a novel but simple interface between the IMS and MS has been designed which minimizes ion losses, allows recording of ion mobility at full IMS resolving power, and enables a shuttered transmission of ions into the MS. The interface is realized by replacing the Faraday plate used in IMS by a Faraday grid that is shielded by two additional aperture grids. For demonstration, positive product ions of benzene, toluene, and m-xylene in air are investigated. The IMS is equipped with a radioactive {sup 3}H source. Besides the well-known product ions M{sup +} and M·NO{sup +}, a dimer ion is also observed for benzene and toluene, consisting of two molecules and three further hydrogen atoms. .

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Photodissociative Cross-Linking of Non-covalent Peptide-Peptide Ion Complexes in the Gas Phase

We report a gas-phase UV photodissociation study investigating non-covalent interactions between neutral hydrophobic pentapeptides and peptide ions incorporating a diazirine-tagged photoleucine residue. Phenylalanine (Phe) and proline (Pro) were chosen as the conformation-affecting residues that were incorporated into a small library of neutral pentapeptides. Gas-phase ion-molecule complexes of these peptides with photo-labeled pentapeptides were subjected to photodissociation. Selective photocleavage of the diazirine ring at 355 nm formed short-lived carbene intermediates that underwent cross-linking by insertion into H–X bonds of the target peptide. The cross-link positions were established from collision-induced dissociation tandem mass spectra (CID-MS{sup 3}) providing sequence information on the covalent adducts. Effects of the amino acid residue (Pro or Phe) and its position in the target peptide sequence were evaluated. For proline-containing peptides, interactions resulting in covalent cross-links in these complexes became more prominent as proline was moved towards the C-terminus of the target peptide sequence. The photocross-linking yields of phenylalanine-containing peptides depended on the position of both phenylalanine and photoleucine. Density functional theory calculations were used to assign structures of low-energy conformers of the (GLPMG + GLL*LK + H){sup +} complex. Born-Oppenheimer molecular dynamics trajectory calculations were used to capture the thermal motion in the complexes within 100 ps and determine close contacts between the incipient carbene and the H–X bonds in the target peptide. This provided atomic-level resolution of potential cross-links that aided spectra interpretation and was in agreement with experimental data. .

74 ATOMIC AND MOLECULAR PHYSICS↗

One hundred anode microchannel plate ion detector

A one-hundred-anode microchannel plate detector is constructed on a 10 cm x 15 cm printed circuit board and attached to a homebuilt matrix assisted laser desorption ionization (MALDI) time-of-flight mass spectrometer. Ringing and cross talk between anodes have been successfully eliminated and preliminary mass spectra of peptide ions recorded. With one hundred anodes on the printed circuit board, spatial information about the ion beam can also be readily determined with this detector. During operation, the detector anode assembly loses sensitivity after ions strike it for a considerable period of time due to charging of the non-conductive regions between anodes. However, this effect can be minimized by deflecting matrix ions away from the detector.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

IonCCD™ for direct position-sensitive charged-particle detection: from electrons and keV ions to hyperthermal biomolecular ions

A novel charged-particle sensitive, pixel based detector array is described and its usage is demonstrated for a variety of applications, from detection of elemental particles (electrons) to hyper-thermal large biomolecular positive and negative ions including keV light atomic and molecular ions. The array detector is a modified light-sensitive charged coupled device (CCD). The IonCCDTM was engineered for direct charged particle detection by replacing the semi-conductor part of the CCD pixel by a conductor1. In contrast with the CCD, where the semi-conductive pixel is responsible for electron-hole pair formation upon photon bombardment, the IonCCD uses a capacitor coupled to the conductive electrode for direct charge integration. The detector can be operated from atmospheric pressure to high vacuum since no high voltages are needed. The IonCCD, presented in this work is an array of 2126 active pixels with 21 um pixel width and 3 um pixel gap. The detection area is 1.5x51mm2 where 1.5 mm and 51 mm are pixel and detector array length, respectively. The result is a one-dimensional position-sensitive detector with 24 um spatial resolution and 88 % pixel area ratio (PAR). In this work we demonstrate the capabilities and the performance of the detector. For the first time we show the direct detection of 250 eV electrons providing linearity response and detection efficiency of the IonCCD as function of electron beam current. Using positive ions from and electron impact source (E-I), we demonstrate that the detection efficiency of the IonCCD is virtually independent of particle energy [250 eV, 1250 eV], particle impact angle [45o, 90o] and particle flux. By combining the IonCCD with a double focusing sector field of Mattauch-Herzog geometry (M-H), we demonstrate fast acquisition of mass spectra in direct air sniffing mode. A first step towards fast in vivo breath analysis is presented. Detection of hyper-thermal biomolecular ions produced using an electrospray ionization source (ESI) is presented. The IonCCD was used as beam profiler to characterize the beam shape and intensity of 15 eV protonated and deprotonated biomolecular ions at the exit of an RF only collisional quadrupole. We present simultaneous detection of 140 eV doubly protonated biomolecular ions when the IonCCD is combined with the M-H analyzer. The latter, demonstrates the possibility of simultaneous separation and micro-array deposition of biological material using a miniature sector field.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Dimesonic states in the heavy-light meson sector

We have calculated the mass spectra and digamma decay width of the dimesonic (meson-antimeson molecule) states in the heavy-light meson sector in the potential model framework. The interaction potential of the systems are assumed to be the Yukawa-like potential with the one pion exchange and sigma exchange potential. The calculated masss spectra of dimesonic states are in good agreement with compared states like D{sub s1}(2536), D{sub sJ}* (2860) and D{sub sJ}(3040).

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Medium Modification of Vector Mesons

The theory of the strong interaction, Quantum Chromodynamics (QCD), has been remarkably successful in describing high-energy and short-distance-scale experiments involving quarks and gluons. However, applying QCD to low energy and large-distance scale experiments has been a major challenge. Various QCD-inspired models predict a partial restoration of chiral symmetry in nuclear matter with modifications of the properties of hadrons from their free-space values. Measurable changes such as a shift in mass and/or a change of width are predicted at normal nuclear density. Photoproduction of vector mesons off nuclei have been performed at different laboratories. The properties of the ρ, ω and φ mesons are investigated either directly by measuring their mass spectra or indirectly through transparency ratios. The latest results regarding medium modifications of the vector mesons in the nuclear medium will be discussed.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Ionization of large homogeneous and heterogeneous clusters generated in acetylene-Ar expansions: Cluster ion polymerization

Pure acetylene and mixed Ar-acetylene clusters are formed in supersonic expansions of acetylene/argon mixtures and analysed using reflectron time-of-flight mass spectrometer with variable electron energy ionization source. Acetylene clusters composed of more than a hundred acetylene molecules are generated at the acetylene concentration of Almost-Equal-To 8%, while mixed species are produced at low concentrations ( Almost-Equal-To 0.7%). The electron energy dependence of the mass spectra revealed the ionization process mechanisms in clusters. The ionization above the threshold for acetylene molecule of 11.5 eV results in the main ionic fragment progression (C{sub 2}H{sub 2}){sub n}{sup +}. At the electron energies Greater-Than-Or-Slanted-Equal-To 21.5 eV above the CH+CH{sup +} dissociative ionization limit of acetylene the fragment ions nominally labelled as (C{sub 2}H{sub 2}){sub n}CH{sup +}, n Greater-Than-Or-Slanted-Equal-To 2, are observed. For n Less-Than-Or-Slanted-Equal-To 7 these fragments correspond to covalently bound ionic structures as suggested by the observed strong dehydrogenation [(C{sub 2}H{sub 2}){sub n}-k Multiplication-Sign H]{sup +} and [(C{sub 2}H{sub 2}){sub n}CH -k Multiplication-Sign H]{sup +}. The dehydrogenation is significantly reduced in the mixed clusters where evaporation of Ar instead of hydrogen can stabilize the nascent molecular ion. The C{sub 3}H{sub 3}{sup +} ion was previously assigned to originate from the benzene molecular ion; however, the low appearance energy of Almost-Equal-To 13.7 eV indicates that a less rigid covalently bound structure of C{sub 6}H{sub 6}{sup +} ion must also be formed upon the acetylene cluster electron ionization. The appearance energy of Ar{sub n}(C{sub 2}H{sub 2}){sup +} fragments above Almost-Equal-To 15.1 eV indicates that the argon ionization is the first step in the fragment ion production, and the appearance energy of Ar{sub n{>=}2}(C{sub 2}H{sub 2}){sub m{>=}2}{sup +} at Almost-Equal-To 13.7 eV is discussed in terms of an exciton transfer mechanism.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Dissociative electron attachment to the radiosensitizing chemotherapeutic agent hydroxyurea

Dissociative electron attachment to hydroxyurea was studied in the gas phase for electron energies ranging from zero to 9 eV in order to probe its radiosensitizing capabilities. The experiments were carried out using a hemispherical electron monochromator coupled with a quadrupole mass spectrometer. Diversified fragmentation of hydroxyurea was observed upon low energy electron attachment and here we highlight the major dissociation channels. Moreover, thermodynamic thresholds for various fragmentation reactions are reported to support the discussion of the experimental findings. The dominant dissociation channel, which was observed over a broad range of energies, is associated with formation of NCO{sup −}, water, and the amidogen (NH{sub 2}) radical. The second and third most dominant dissociation channels are associated with formation of NCNH{sup −} and NHCONH{sub 2}{sup −}, respectively, which are both directly related to formation of the highly reactive hydroxyl radical. Other ions observed with significant abundance in the mass spectra were NH{sub 2}{sup −}/O{sup −}, OH{sup −}, CN{sup −}, HNOH{sup −}, NCONH{sub 2}{sup −}, and ONHCONH{sub 2}{sup −}.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Charmed Bottom Baryon Spectroscopy

The arena of doubly and triply heavy baryons remains experimentally unexplored to a large extent. This has led to a great deal of theoretical effort being put forth in the calculation of mass spectra in this sector. Although the detection of such heavy particle states may lie beyond the reach of experiments for some time, it is interesting to compare results between lattice QCD computations and continuum theoretical models. Several recent lattice QCD calculations exist for both doubly and triply charmed as well as doubly and triply bottom baryons. In this work we present preliminary results from the first lattice calculation of the mass spectrum of doubly and triply heavy baryons including both charm and bottom quarks. The wide range of quark masses in these systems require that the various flavors of quarks be treated with different lattice actions. We use domain wall fermions for 2+1 flavors (up down and strange) of sea and valence quarks, a relativistic heavy quark action for the charm quarks, and non-relativistic QCD for the heavier bottom quarks. The calculation of the ground state spectrum is presented and compared to recent models.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Localization of gravitino field on branes

In this paper, we investigate the localization of a bulk gravitino field on the scalar-tensor branes and compare the result with that in the Randall–Sundrum-1 (RS1) model. The coupled chiral equations for the Kaluza–Klein (KK) modes of the gravitino field are obtained by fixing the gauge Ψ{sub 5}=0 and using the chiral KK decompositions. It is shown that, in the RS1 model for the left- and right-handed zero modes of the gravitino field, only one of them can be localized near one brane. For the massive modes, both chiral modes survive and the lower KK modes are localized near the IR brane from the four-dimensional physical coordinate point of view. However, for the scalar-tensor brane model, the localization of the gravitino chiral zero modes depends on the coupling parameter λ, and they will be not localized around anyone brane within a certain range of the parameter λ, which is quite different from the RS1 model. Furthermore, we also give the corresponding mass spectra of the massive KK gravitinos in the scalar-tensor model.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

The third generation (e,e'K+) hypernuclear spectroscopic experiment at JLab Hall-C

We carried out a Lambda hypernuclear spectroscopic experiment at Jefferson Lab in 2009, aiming at precise spectroscopy of {Lambda} hypernuclei in the wide-mass region up to A = 52. The experiment has been successfully carried out and now we are in data analysis phase. The most important point of the analysis is precision mass scale calibration by comparing mass spectra of Lambda hypernuclei and Lambda and {Sigma}{sup 0} hyperons in the same setup with {Lambda} hypernuclear spectroscopic experiment. We show a preliminary result of the calibration analysis with {sup 12}{sub {Lambda}}B spectrum.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Communication: Barium ions and helium nanodroplets: Solvation and desolvation

The solvation of Ba{sup +} ions created by the photoionization of barium atoms located on the surface of helium nanodroplets has been investigated. The excitation spectra corresponding to the 6p {sup 2}P{sub 1/2} Leftwards-Arrow 6s {sup 2}S{sub 1/2} and 6p {sup 2}P{sub 3/2} Leftwards-Arrow 6s {sup 2}S{sub 1/2} transitions of Ba{sup +} are found to be identical to those recorded in bulk He II [H. J. Reyher, H. Bauer, C. Huber, R. Mayer, A. Schafer, and A. Winnacker, Phys. Lett. A 115, 238 (1986)], indicating that the ions formed at the surface of the helium droplets become fully solvated by the helium. Time-of-flight mass spectra suggest that following the excitation of the solvated Ba{sup +} ions, these are being ejected from the helium droplets either as bare Ba{sup +} ions or as small Ba{sup +}He{sub n} (n < 20) complexes.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Formation of H{sub 2} from internally heated polycyclic aromatic hydrocarbons: Excitation energy dependence

We have investigated the effectiveness of molecular hydrogen (H{sub 2}) formation from Polycyclic Aromatic Hydrocarbons (PAHs) which are internally heated by collisions with keV ions. The present and earlier experimental results are analyzed in view of molecular structure calculations and a simple collision model. We estimate that H{sub 2} formation becomes important for internal PAH temperatures exceeding about 2200 K, regardless of the PAH size and the excitation agent. This suggests that keV ions may effectively induce such reactions, while they are unlikely due to, e.g., absorption of single photons with energies below the Lyman limit. The present analysis also suggests that H{sub 2} emission is correlated with multi-fragmentation processes, which means that the [PAH-2H]{sup +} peak intensities in the mass spectra may not be used for estimating H{sub 2}-formation rates.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A source for microhydrated biomolecules

We describe the construction of an apparatus for the production of a molecular jet of microhydrated biomolecules. Our design uses a water reservoir producing water vapour, which then passes through a separate reservoir containing a vapour of a sublimated biomolecule. The mixture coexpands into a molecular beam apparatus through a conical nozzle. Mass spectra showing water-adenin and water-uracil complexes are shown as typical examples. Suitable expansion conditions are reached without the use of an inert carrier gas.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Coulomb’s law corrections and fermion field localization in a tachyonic de Sitter thick braneworld

Following recent studies which show that it is possible to localize gravity as well as scalar and gauge vector fields in a tachyonic de Sitter thick braneworld, we investigate the solution of the gauge hierarchy problem, the localization of fermion fields in this model, the recovering of the Coulomb law on the non-relativistic limit of the Yukawa interaction between bulk fermions and gauge bosons localized in the brane, and confront the predicted 5D corrections to the photon mass with its upper experimental/observational bounds, finding the model physically viable since it passes these tests. In order to achieve the latter aims we first consider the Yukawa interaction term between the fermionic and the tachyonic scalar fields MF(T)ΨΨ-bar in the action and analyze four distinct tachyonic functions F(T) that lead to four different structures of the respective fermionic mass spectra with different physics. In particular, localization of the massless left-chiral fermion zero mode is possible for three of these cases. We further analyze the phenomenology of these Yukawa interactions among fermion fields and gauge bosons localized on the brane and obtain the crucial and necessary information to compute the corrections to Coulomb’s law coming from massive KK vector modes in the non-relativistic limit. These corrections are exponentially suppressed due to the presence of the mass gap in the mass spectrum of the bulk gauge vector field. From our results we conclude that corrections to Coulomb’s law in the thin brane limit have the same form (up to a numerical factor) as far as the left-chiral massless fermion field is localized on the brane. Finally we compute the corrections to the Coulomb’s law for an arbitrarily thick brane scenario which can be interpreted as 5D corrections to the photon mass. By performing consistent estimations with brane phenomenology, we found that the predicted corrections to the photon mass, which are well bounded by the experimentally observed or astrophysically inferred photon mass, are far beyond its upper bound, positively testing the viability of our tachyonic braneworld. Moreover, the 5D parameters that define these corrections possess the same order, providing naturalness to our model, however, a fine-tuning between them is needed in order to fit the corresponding upper bound on the photon mass.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗