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At least 289 records · Page 16

Ultrahigh-resolution mass spectrometry data associated with the manuscript “A functional microbiome catalog crowdsourced from North American rivers"

This data package is associated with the publication “A functional microbiome catalog crowdsourced from North American rivers” submitted to Nature (Borton et al., 2024); (https://www.biorxiv.org/content/10.1101/2023.07.22.550117v1). Predicting elemental cycles and maintaining water quality under increasing anthropogenic influence requires understanding the spatial drivers of river microbiomes. However, the unifying microbial determinants governing river biogeochemistry are hindered by a lack of genome-resolved functional insights and sampling across multiple rivers. Here we employed a community science effort to accelerate the sampling of river microbiomes to create the Genome Resolved Open Watersheds database (GROWdb). GROWdb is a publicly available resource that paves the way for watershed predictive modeling and microbiome-based management practices. This resource profiled the identity, distribution, function, and expression of thousands of microbial genomes across rivers covering 90% of United States watersheds. We identified the most cosmopolitan microbiome members, while also revealing local drivers of strain endemism across ecological dimensions. We provide the first evidence that microbial functional trait expression followed the tenets of the River Continuum Concept, suggesting the structure and function of river microbiomes is predictable. The Fourier-transform ion cyclotron resonance mass spectrometry (FTICR-MS) data were one of many different data types used in establishing the ecological dimensions along which different microbes were detected .This data package only contains the processed FTICR-MS data associated with this manuscript; all other data is accessible via Zenodo (https://zenodo.org/records/8173287), GitHub (https://github.com/jmikayla1991/Genome-Resolved-Open-Watersheds-database-GROWdb), KBase (https://doi.org/10.25982/109073.30/1895615), and NCBI via Bioproject PRJNA946291.This dataset consists of (1) a file-level metadata (flmd) file; (2) a data dictionary (dd) file; (3) a readme; (4) three Fourier-transform ion cyclotron resonance mass spectrometry (FTICR-MS) processed data files (a ‘data’ file containing peak-by-sample observations, a ‘mol’ file containing peak metadata, and a transformation profile containing transformation-by-sample observations). All files are .csv or .pdf.

54 ENVIRONMENTAL SCIENCES↗

Automated cataloging and characterization of space-derived data

One of the most significant technical issues that NASA must address and resolve is the problem of managing the enormous amounts of scientific and engineering data that will be generated by the next generation of remote sensing systems such as the Hubble Space Telescope (HST) and the Earth Observing System (EOS). The amount of data these sensors are expected to produce will be orders of magnitude greater than NASA has ever experienced. Consequently new solutions must be developed for managing, accessing, and automatically inputting the data into a database in some expressive fashion that will provide a meaningful understanding and effective utilization of this data in a multidisciplinary environment. Presently, scientific data provided by satellites and other sources are processed, cataloged, and archived according to narrow mission or project-specific requirements with little regard to the semantics of the overall research. Scientists therefore lack knowledge of or access to potentially valuable data outside their own field. What is needed is an innovative approach that will allow collected data to be automatically cataloged, characterized, and managed in a domain-community. A concept and design approach that employs expert system-based knowledge controllers combined with advanced spatial database systems and graphical data structures is discussed.

Campbell, William J.↗

Automated cataloging and characterization of space-derived data

One of the most significant technical issues that NASA must address and resolve is the problem of managing the enormous amounts of scientific and engineering data that will be generated by the next generation of remote sensing systems such as the Hubble Space Telescope (HST) and the Earth Observing System (EOS). The amount of data these sensors are expected to produce will be orders of magnitude greater than NASA has ever experienced. Consequently, new solutions must be developed for managing, accessing, and automatically inputting the data into a database in some expressive fashion that will provide a meaningful understanding and effective utilization of this data in a multidisciplinary environment. Presently, scientific data provided by satellites and other sources are processed, cataloged, and archived according to narrow mission or project-specific requirements with little regard to the semantics of the overall research. Scientists therefore lack knowledge of or access to potentially valuable data outside their own field. What is needed is an innovative approach that will allow collected data to be automatically cataloged, characterized, and managed in a domain-community. A concept and design approach that employs expert system-based knowledge controllers combined with advanced spatial database systems and graphical data structures is discussed.

Campbell, William J.↗

The NASA Space Shuttle Earth Observations Office

The NASA Space Shuttle Earth Observations Office conducts astronaut training in earth observations, provides orbital documentation for acquisition of data and catalogs, and analyzes the astronaut handheld photography upon the return of Space Shuttle missions. This paper provides backgrounds on these functions and outlines the data constraints, organization, formats, and modes of access within the public domain.

Helfert, Michael R.↗

Millimeter-wave observations of Euclid Deep Field South using the South Pole Telescope: A data release of temperature maps and catalogs

Context. The South Pole Telescope third-generation camera (SPT-3G) has observed over 10,000 square degrees of sky at 95, 150, and 220 GHz (3.3, 2.0, 1.4 mm, respectively) and will significantly overlap the ongoing 14,000 square-degree Euclid Wide Survey. The Euclid collaboration recently released Euclid Deep Field South (EDF-S) observations of 23 square degrees at wide field depths in the first quick data release (Q1). Aims. With the goal of releasing complementary millimeter-wave data and encouraging legacy science, we performed dedicated observations of a 57-square-degree field overlapping the EDF-S. Methods. The observing time totaled 20 days, and we reached noise depths of 4.3, 3.8, and 13.2 $μ$K-arcmin at 95, 150, and 220 GHz, respectively. Results. In this work we present the temperature maps and two catalogs constructed from these data. The emissive source catalog contains 601 objects (334 inside EDF-S) with 54% synchrotron-dominated sources and 46% thermal dust emission-dominated sources. The 5$σ$ detection thresholds are 1.7, 2.0, and 6.5 mJy in the three bands. The cluster catalog contains 217 cluster candidates (121 inside EDF-S) with median mass $M_{500c}=2.12 \times 10^{14} M_{\odot}/h_{70}$ and median redshift $z$ = 0.70, corresponding to an order-of-magnitude improvement in cluster density over previous tSZ-selected catalogs in this region (3.81 clusters per square degree). Conclusions. The overlap between SPT and Euclid data will enable a range of multiwavelength studies of the aforementioned source populations. This work serves as the first step toward joint projects between SPT and Euclid and provides a rich dataset containing information on galaxies, clusters, and their environments.

Archipley, M. [Chicago U., Astron. Astrophys. Ctr.↗

Opportunities in AI/ML for the Rubin LSST Dark Energy Science Collaboration

The Vera C. Rubin Observatory's Legacy Survey of Space and Time (LSST) will produce unprecedented volumes of heterogeneous astronomical data (images, catalogs, and alerts) that challenge traditional analysis pipelines. The LSST Dark Energy Science Collaboration (DESC) aims to derive robust constraints on dark energy and dark matter from these data, requiring methods that are statistically powerful, scalable, and operationally reliable. Artificial intelligence and machine learning (AI/ML) are already embedded across DESC science workflows, from photometric redshifts and transient classification to weak lensing inference and cosmological simulations. Yet their utility for precision cosmology hinges on trustworthy uncertainty quantification, robustness to covariate shift and model misspecification, and reproducible integration within scientific pipelines. This white paper surveys the current landscape of AI/ML across DESC's primary cosmological probes and cross-cutting analyses, revealing that the same core methodologies and fundamental challenges recur across disparate science cases. Since progress on these cross-cutting challenges would benefit multiple probes simultaneously, we identify key methodological research priorities, including Bayesian inference at scale, physics-informed methods, validation frameworks, and active learning for discovery. With an eye on emerging techniques, we also explore the potential of the latest foundation model methodologies and LLM-driven agentic AI systems to reshape DESC workflows, provided their deployment is coupled with rigorous evaluation and governance. Finally, we discuss critical software, computing, data infrastructure, and human capital requirements for the successful deployment of these new methodologies, and consider associated risks and opportunities for broader coordination with external actors.

Aubourg, Eric [APC, Paris] (ORCID:000000025592023X↗

Phase curves of small bodies from the SLOAN Moving Objects Catalog

Extensive photometric surveys continue to produce enormous stores of data on small bodies. These data are typically sparsely obtained at arbitrary (or unknown) rotational phases. Therefore, new methods for processing such data need to be developed to make the most of these vast catalogs. We aim to produce a method of recreating the phase curves of small bodies by considering the uncertainties introduced by the nominal errors in the magnitudes and the effect introduced by rotational variations. Here, we use the SLOAN Moving Objects Catalog data as a benchmark to construct phase curves of all small bodies in u', g', r', i', and z' filters. From the phase curves, we obtain the absolute magnitudes and we use them to set up the absolute colors, which are the colors of the asteroids that are not affected by changes in the phase angle. We selected objects with ≥3 observations taken in at least one filter and spanning over a minimum of 5 degrees in the phase angle. We developed a method that combines Monte Carlo simulations and Bayesian inference to estimate the absolute magnitudes using the HG 12 * photometric system. We obtained almost 15 000 phase curves, with about 12 000 of these including all five filters. The absolute magnitudes and absolute colors are compatible with previously published data that support our method. The method we developed is fully automatic and well suited for a run based on large amounts of data. Moreover, it includes the nominal uncertainties in the magnitudes and the whole distribution of possible rotational states of the objects producing what are possibly less precise values, that is, larger uncertainties, but more accurate, namely, closer to the actual value. To our knowledge, this work is the first to include the effect of rotational variations in such a manner.

79 ASTRONOMY AND ASTROPHYSICS↗

Architecture of a large object-oriented database for remotely sensed data

Attention is given to the proposed Intelligent Information Fusion System (IIFS) within the framework of the Intelligent Data Management project at NASA-Goddard. IIFS is to use connectionist architectures to extract high-level attributes from incoming sensor images, and then send those characterizations and their associated ephemeris and ancillary image data to a large object-oriented database which will serve as the master catalog of sensor data. Important issues facing this project include the choice of rapid-access data structures (RADSs) for cataloging images by their high-level characterization, the implementation of efficient spatial data structures for cataloging images by their scene location, the automated population of such a database from a continuous stream of incoming ephemeris and ancillary data, and the translation and optimization of natural-language database queries so that RADSs are employed when appropriate.

Dorfman, Erik↗

Constructing a High‐Resolution Aftershock Catalog for the 2017 Mw 8.2 Tehuantepec Earthquake Sequence Using a Machine Learning–Based Workflow

The 8 September 2017 Mw 8.2 Tehuantepec earthquake was the largest instrumentally recorded normal‐faulting earthquake in Mexico. The mainshock occurred offshore within the Tehuantepec seismic gap, generating >30,000 aftershocks in the following year. We applied an open‐source, machine learning (ML)–assisted workflow to construct a high‐resolution aftershock catalog using data from temporary and permanent seismic networks in southern Mexico. The workflow integrates PhaseNet for phase detection; GaMMA for phase association; and VELEST, HypoInverse, and HypoDD for velocity modeling and relocation. We processed seven months of continuous waveform data from 29 broadband stations, including a temporary rapid‐response deployment that improved station coverage of the offshore rupture zone. To evaluate performance, we compared our results against analyst‐reviewed picks and event locations from the Servicio Sismológico Nacional catalog. The resulting catalog contains 11,374 relocated earthquakes and represents the most comprehensive published dataset for this sequence, incorporating the first full use of the temporary network. Relocated hypocenters show improved depth control and align well with the Slab2.0 subduction geometry, revealing clearer separation between offshore slab events and onshore crustal seismicity. This study demonstrates that combining ML‐based detection with established methods provides a scalable and reproducible approach for constructing high‐quality earthquake catalogs in tectonically complex environments and offers practical guidance for adapting similar workflows to other earthquake sequences.

Garcia, Marc [The University of Texas at El Paso, ↗

PCDS overview

A brief overview of the philosophy, design, and organization of the Pilot Climate Data System (PCDS) is presented. The design has evolved, over time, to deal with numerous data sets, provide appropriate tools for the manipulation and display of such data, and support a wide variety of users. The user interface to the system is provided by the Transportable Applications Executive (TAE). A user can choose one of the five major subsystems from the root menu display. These subsystems are CATALOG, INVENTORY, DATA ACCESS, DATA MANIPULATION, and GRAPHICS. Each subsystem was discussed and examples were given, demonstrating the flexibility provided by the existing PCDS software, Version 3.3. Three of these subsystems are presently being redesigned to provide a more flexible and friendly structure, to allow more consistency and facilitate the ability to support new data sets. Ongoing developmental efforts to migrate from the Version 3.3 prototype phase of PCDS to the operational Version 4.0 stress increased flexibility and data independence.

Treinish, L.↗

Systems and methods for determining a spacecraft orientation

Disclosed are systems and methods of determining or estimating an orientation of a spacecraft. An exemplary system generates telemetry data, including star observations, in a satellite. A ground station processes the telemetry data with data from a star catalog, to generate display data which, in this example, includes observed stars overlaid with catalog stars. An operator views the display and generates an operator input signal using a mouse device, to pair up observed and catalog stars. Circuitry in the ground station then processes two pairs of observed and catalog stars, to determine an orientation of the spacecraft.

Harman, Richard R↗

New developments at the NASA Astronomical Data Center

The need for a compilation catalog containing a large variety of astronomical data for the Astronomical Data Base of NASA is considered. It is suggested that the catalog should be prepared directly from the SIMBAD data base by processing through a single software program and made available for distribution on magnetic tape or microfilm. Annual updating is recommended to ensure the quality of the catalog. Data recommended for inclusion in the compilation catalog are listed in a table.

Warren, W. H., Jr.↗

DESIVAST: Catalogs of Low-redshift Voids Using Data from the DESI Data Release 1 Bright Galaxy Survey

We present three separate void catalogs created using a volume-limited sample of the DESI Data Release 1 Bright Galaxy Survey. We use the algorithms VoidFinder and V 2 to construct void catalogs out to a redshift of z = 0.24. Excluding voids affected by the boundaries of the survey, we obtain 1489 voids with VoidFinder, 389 with V 2 using REVOLVER pruning, and 297 with V 2 using VIDE pruning. Comparing our catalogs with overlapping Sloan Digital Sky Survey void catalogs, we find generally consistent void properties but significant differences in the void volume overlap, which we attribute to differences in the galaxy selection and survey masks. These catalogs are suitable for studying the variation in galaxy properties with cosmic environment and for cosmological studies.

79 ASTRONOMY AND ASTROPHYSICS↗

Clustering with general photo- z uncertainties: application to Baryon Acoustic Oscillations

ABSTRACT Photometric data can be analysed using the 3D correlation function ξp to extract cosmological information via e.g. measurement of the Baryon Acoustic Oscillations (BAO). Previous studies modeled ξp assuming a Gaussian photo-z approximation. In this work we improve the modeling by incorporating realistic photo-z distribution. We show that the position of the BAO scale in ξp is determined by the photo-z distribution and the Jacobian of the transformation. The latter diverges at the transverse scale of the separation s⊥, and it explains why ξp traces the underlying correlation function at s⊥, rather than s, when the photo-z uncertainty σz/(1+ z) ≳ 0.02. We also obtain the Gaussian covariance for ξp. Due to photo-z mixing, the covariance of ξp shows strong off-diagonal elements. The high correlation of the data causes some issues to the data fitting. None the less, we find that either it can be solved by suppressing the largest eigenvalues of the covariance or it is not directly related to the BAO. We test our BAO fitting pipeline using a set of mock catalogs. The data set is dedicated for Dark Energy Survey Year 3 (DES Y3) BAO analyses and includes realistic photo-z distributions. The theory template is in good agreement with mock measurement. Based on the DES Y3 mocks, ξp statistic is forecast to constrain the BAO shift parameter α to be 1.001 ± 0.023, which is well consistent with the corresponding constraint derived from the angular correlation function measurements. Thus, ξp offers a competitive alternative for the photometric data analyses.

79 ASTRONOMY AND ASTROPHYSICS↗

A Data Processing Pipeline To Extract A Knowledge Graph From Heterogeneous Data For Socio-technical Analysis Of Critical Infrastructure Influence

The code is written in Python and consists of the following pipeline that is implemented in Apache Airflow. This pipeline intends to understand the companies that are directly or indirectly involved with a type of critical infrastructure system at some point in that system's lifecycle. The pipeline takes a configuration file that specifies a list of initial companies to consider, a geographic region of interest, and a set of SEC form types as well as other data sources (e.g. CrunchBase) from which to extract entities and relations. There are four main components to this pipeline as currently implemented: Entity Extraction, Network Construction, Analysis, and Visualization. First, Entity Extraction, is implemented as the `topear-extract_organizations` Apache Airflow workflow. Given an initial query that specifies a geographic region of interest and a time interval, the software will extract CI facilities of interest and organizations that have a direct influence relationship to those facilities (e.g. ownership). During the course of the LDRD, we focused on Electric Vehicle charging stations and this information is available via the Department of Energy (DOE) database on fueling stations maintained by NREL. Within the context of the DOE CESER project, we have focused on Battery Energy Storage Systems (BESS). Second, the Network Extraction component will iteratively construct a social network graph given the set of organizations and people extracted in the previous step. Organizations (and eventually People if desired) are then fed as a query to the `topgear-construct_social_network` Apache Airflow workflow which given a set of initial companies and data sets (e.g. SEC EDGAR form types, OpenCorporates, Crunchbase). This Airflow workflow will iteratively query such data sources to discover relationships with new organizations and people. For example, this module can iteratively query SEC EDGAR for metadata that documents the number of each type of form for the given set of companies and their location. This forms metadata represents a catalog of data sources from SEC EDGAR for the extracted social network knowledge graph. The pipeline then downloads these forms from the website and saves them in a build directory for further processing. These documents are then parsed for entities and relations. Again, we note that in additional to SEC data sources, this step can also pull in information on organizations via API services such as CrunchBase and OpenCorporates or bulk data sources. At the end of this step, the resultant social network, the Critical Infrastructure network, and the edges that encode relationships between organizations and CI facilities, form the Adversarial Socio-Technical Network (ASTN) that informs the analysis. Third, the Analysis component processes these generated ASTN. Previously, that has included the ability to compare prevalence of different vendors for a given infrastructure component type across different regions as well as identify common public and private investors across those vendors. This was demonstrated for EV Charging Stations across several different metropolitan areas within an IEEE PES GridEdge publication. More recently, we have looked at ways to identify infrastructure owners and operators of BESS with the most nameplate capacity across different states as well as other indictors of risk resulting from changes in ownership over time. Finally, the Visualization component consists of an HTML/CSS/JS framework by which users can interact geospatial, operational, and organizational relationships across a given portfolio of Critical Infrastructure facilities. The objective is to provide a library of UI/UX modules that can be repurposed for stakeholder-specific dashboards. All of the modules are related via a common event model that enables UI actions in one view to percolate across the other views.

Weaver, Gabriel [Idaho National Laboratory (INL), ↗

Documentation for the machine-readable version of the revised Catalogue of Stellar Rotational Velocities of Uesugi and Fukuda (1982)

The machine-readable catalog provides mean data on the old Slettebak system for 6472 stars. The catalog results from the review, analysis and transformation of 11460 data from 102 sources. Star identification, (major catalog number, name if the star has one, or cluster identification, etc.), a man projected rotational velocity, and a list of source references re included. The references are given in a second file included with the catalog when it is distributed on magnetic tape. The contents and/formats of the the data and reference files of the machine-readable catalog are described to enable users to read and process the data.

Warren, W. H., Jr.↗

BASS. XXIV. The BASS DR2 Spectroscopic Line Measurements and AGN Demographics

We present the second catalog and data release of optical spectral line measurements and active galactic nucleus (AGN) demographics of the BAT AGN Spectroscopic Survey, which focuses on the Swift-BAT hard X-ray detected AGNs. We use spectra from dedicated campaigns and publicly available archives to investigate spectral properties of most of the AGNs listed in the 70 month Swift-BAT all-sky catalog; specifically, 743 of the 746 unbeamed and unlensed AGNs (99.6%). We find a good correspondence between the optical emission line widths and the hydrogen column density distributions using the X-ray spectra, with a clear dichotomy of AGN types for N H = 10 22 cm –2 . Based on optical emission-line diagnostics, we show that 48%–75% of BAT AGNs are classified as Seyfert, depending on the choice of emission lines used in the diagnostics. The fraction of objects with upper limits on line emission varies from 6% to 20%. Roughly 4% of the BAT AGNs have lines too weak to be placed on the most commonly used diagnostic diagram, [O iii ]λ5007/Hβ versus [N ii ]λ6584/Hα, despite the high signal-to-noise ratio of their spectra. This value increases to 35% in the [O iii ]λ5007/[O ii ]λ3727 diagram, owing to difficulties in line detection. Compared to optically selected narrow-line AGNs in the Sloan Digital Sky Survey, the BAT narrow-line AGNs have a higher rate of reddening/extinction, with Hα/Hβ > 5 (~36%), indicating that hard X-ray selection more effectively detects obscured AGNs from the underlying AGN population. Finally, we present a subpopulation of AGNs that feature complex broad lines (34%, 250/743) or double-peaked narrow emission lines (2%, 17/743).

79 ASTRONOMY AND ASTROPHYSICS↗

Data Integration Support for Data Served in the OPeNDAP and OGC Environments

NASA is coordinating a technology development project to construct a gateway between system components built upon the Open-source Project for a Network Data AcceSs Protocol (OPeNDAP) and those made available made available via interfaces specified by the Open Geospatial Consortium (OGC). This project is funded though the Advanced Collaborative Connections for Earth-Sun System Science (ACCESS) Program and is a NASA contribution to the Committee on Earth Satellites (CEOS) Working Group on Information Systems and Services (WGISS). The motivation for the project is the set of data integration needs that have been expressed by the Coordinated Enhanced Observing Period (CEOP), an international program that is addressing the study of the global water cycle. CEOP is assembling a large collection in situ and satellite data and mode1 results from a wide variety of sources covering 35 sites around the globe. The data are provided by systems based on either the OPeNDAP or OGC protocols but the research community desires access to the full range of data and associated services from a single client. This presentation will discuss the current status of the OPeNDAP/OGC Gateway Project. The project is building upon an early prototype that illustrated the feasibility of such a gateway and which was demonstrated to the CEOP science community. In its first year as an ACCESS project, the effort has been has focused on the design of the catalog and data services that will be provided by the gateway and the mappings between the metadata and services provided in the two environments.

McDonald, Kenneth R.↗