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At least 271 records · Page 15

Relativistic Corrections to the Properties of the Alkali Fluorides

Relativistic corrections to the bond lengths, dissociation energies and harmonic frequencies of KF, RbF and CsF have been obtained at the self-consistent field level by dissociating to ions. The relativistic corrections to the bond lengths, harmonic frequencies and dissociation energies to the ions are very small, due to the ionic nature of these molecules and the similarity of the relativistic and nonrelativistic ionic radii.

Dyall, Kenneth G.↗

Prebiotic Chemistry of Pluto

We present the case for the presence of complex organic molecules, such as amino acids and nucleobases, formed by abiotic processes on the surface and in near-subsurface regions of Pluto. Pluto's surface is tinted with a range of non-ice substances with colors ranging from light yellow to red to dark brown; the colors match those of laboratory organic residues called tholins. Tholins are broadly characterized as complex, macromolecular organic solids consisting of a network of aromatic structures connected by aliphatic bridging units (e.g., Imanaka et al.,2004; Materese et al.,2014, 2015). The synthesis of tholins in planetary atmospheres and in surface ices has been explored in numerous laboratory experiments, and both gas- and solid-phase varieties are found on Pluto. A third variety of tholins, exposed at a site of tectonic surface fracturing called Virgil Fossae, appears to have come from a reservoir in the subsurface. Eruptions of tholin-laden liquid H2O from a subsurface aqueous repository appear to have covered portions of Virgil Fossae and its surroundings with a uniquely colored deposit (D.P. Cruikshank, personal communication) that is geographically correlated with an exposure of H2O ice that includes spectroscopically detected NH3 (C.M. Dalle Ore, personal communication). The subsurface organic material could have been derived from presolar or solar nebula processes, or might have formed in situ. Photolysis and radiolysis of a mixture of ices relevant to Pluto's surface composition (N2, CH4, CO) have produced strongly colored, complex organics with a significant aromatic content having a high degree of nitrogen substitution similar to the aromatic heterocycles pyrimidine and purine (Materese et al.,2014, 2015; Cruikshank et al.,2016). Experiments with pyrimidines and purines frozen in H2O-NH3 ice resulted in the formation of numerous nucleobases, including the biologically relevant guanine, cytosine, adenine, uracil, and thymine (Materese et al.,2017). The red material associated with the H2O ice may contain nucleobases resulting from energetic processing on Pluto's surface or in the interior. Some other Kuiper Belt objects also exhibit red colors similar to those found on Pluto and may therefore carry similar inventories of complex organic materials. The widespread and ubiquitous nature of similarly complex organic materials observed in a variety of astronomical settings drives the need for additional laboratory and modeling efforts to explain the origin and evolution of organic molecules. Pluto observations reveal complex organics on a small body that remains close to its place of origin in the outermost regions of the Solar System.

Cruikshank, D. P.↗

The Role of Conical Intersections in Electronic Quenching of a State OH by H2 and N2

Lester and coworkers have experimentally characterized complexes of OH in the X and A states with H2 and N2. Recently, we have carried out ab initio calculations of relevant portions of the ground state and excited state potential energy surfaces for these systems, including the conical intersection regions, which are responsible for electronic quenching of the A state of OH by H2 and N2. Both of these systems have weakly bound complexes in the X state and strongly bound complexes in the A state. The OH-H2 complex is T-shaped, while the OH-N2 complex is collinear. In both cases the H end of OH is oriented toward the H2 or N2 molecule, respectively. Rotation of the OH about its center of mass involves only a small barrier and rotation by 1800 so that the 0 end of OH is oriented toward the H2 or N2 molecule leads to conical intersections with the ground state surface. Since there is about 95 kcal/mol of available energy after crossing to the ground state surface, chemical reactions on the ground state surface are possible, in addition to electronic quenching. In the case of OH-H2, the conical intersection is much lower in energy than the OH (A state) + H2 asymptotic energy and the A state complex can be characterized as a hanging well on the upper cone of the conical intersection. Passage through the conical intersection places the system on the ground state potential energy surface with the possibility of going to OH (X state) + H2 (i.e. electronic quenching) or to H2O + H (reaction). For OH-N2, the A state complex is also a hanging well on the upper cone of the conical intersection, but the conical intersection is only slightly below the OH (A state) + H2 asymptotic energy. Passage through the conical intersection can lead to OH (X state) + N2 (i.e. electronic quenching), but so far reactive pathways have not been found.

Walch, Stephen P.↗

Probing Cometary Chemistry with ALMA

Comets are considered to bear the record of the primitive Solar nebula as remnants of planetesimals that formed the outer planets. To date there are just over two dozen known cometary species compared to the >150 known interstellar molecules. This is likely due to the challenges posed when attempting to measure the composition of these small bodies. With the significant improvement in sensitivity, ALMA will likely enable the detection of new molecules to help us gain better understanding of the chemical complexity found in comets. This advancement in sensitivity will also assist in the measurement of isotope ratios in various species. These values are imperative for determining the conditions during cometary formation as well as provide insight into ongoing speculations of parent species, the possible delivery of H2O to Earth, and a direct comparison to protostellar disk chemistry. The high angular resolution obtained with ALMA will be capable of resolving any compact distributions or density enhancements in the more extended distribution that may lead to a better understanding of the formation of these species in the outer coma. By studying comet compositions we gain insight into the composition of the early Solar System as well as their astrobiological implications.

Milam, Stefanie N.↗

Kinetics of Organic Transformations Under Mild Aqueous Conditions: Implications for the Origin of Life and Its Metabolism

The rates of thermal transformation of organic molecules containing carbon, hydrogen, and oxygen were systematically examined in order to identify the kinetic constraints that governed origin-of-life organic chemistry under mild aqueous conditions. Arrhenius plots of the kinetic data were used to estimate the reaction half-life at 50 C, and to reveal the effect of functional groups on reactivity. This survey showed that hydrocarbons and organic substances containing a single oxygenated group were kinetically the most stable (i. e. acetate decarboxylation half-life was l0(exp 18) years at 50 C); whereas, organic substances containing two oxygenated groups in which one group was a beta-positioned carbonyl group were the most reactive (i. e. acetoacetate decarboxylation half-life was l0(exp-2) years at 50 C). Of all functional groups the beta-positioned carbonyl group (aldehyde or ketone) was the strongest activating group, giving rates of reaction that were up to 10(exp 24)-times faster than rates of similar molecules lacking the beta-carbonyl group. From this knowledge of organic reactivity and the inherent constraints of autocatalytic processes, we concluded that an origins-of-life process based on autocatalytic transformation of C,H,O-substrates was constrained to using the most reactive organic molecules that contain alpha- or beta-carbonyl groups, since small autocatalytic domains of plausible catalytic power that used less reactive substrates could not carry out chemical transformations fast enough to prevent catastrophic efflux (escape) of reaction intermediates. Knowledge of the kinetics of organic transformations is useful, not only in constraining the chemistry of the earliest autocatalytic process related to the origin of life, but also in establishing the relative reactivity of organic molecules on the early Earth and other planets that may or may not be related to the origin of life.

Weber, Arthur L.↗

Excess chemical potential of small solutes across water--membrane and water--hexane interfaces

The excess chemical potentials of five small, structurally related solutes, CH4, CH3F, CH2F2, CHF3, and CF4, across the water-glycerol 1-monooleate bilayer and water-hexane interfaces were calculated at 300, 310, and 340 K using the particle insertion method. The excess chemical potentials of nonpolar molecules (CH4 and CF4) decrease monotonically or nearly monotonically from water to a nonpolar phase. In contrast, for molecules that possess permanent dipole moments (CH3F, CH2F, and CHF3), the excess chemical potentials exhibit an interfacial minimum that arises from superposition of two monotonically and oppositely changing contributions: electrostatic and nonelectrostatic. The nonelectrostatic term, dominated by the reversible work of creating a cavity that accommodates the solute, decreases, whereas the electrostatic term increases across the interface from water to the membrane interior. In water, the dependence of this term on the dipole moment is accurately described by second order perturbation theory. To achieve the same accuracy at the interface, third order terms must also be included. In the interfacial region, the molecular structure of the solvent influences both the excess chemical potential and solute orientations. The excess chemical potential across the interface increases with temperature, but this effect is rather small. Our analysis indicates that a broad range of small, moderately polar molecules should be surface active at the water-membrane and water-oil interfaces. The biological and medical significance of this result, especially in relation to the mechanism of anesthetic action, is discussed.

NASA Center ARC↗

The molecular composition of dense interstellar clouds

Presented in this paper is an ab initio chemical model for dense interstellar clouds that incorporates 598 grain surface reactions, with small grains providing the reaction area. Gas-phase molecules are depleted through collisions with grains. The abundances of 372 chemical species are calculated as a function of time and are found to be of sufficient magnitude to explain most observations. Peak abundances are achieved on time scales of the order of 100,000 to 1 million years, depending on cloud density and kinetic temperature. The reaction rates for ion-molecule chemistry are approximately the same, indicating that surface and gas-phase chemistry may be coupled in certain regions. The composition of grain mantles is shown to be a function of grain radius. In certain grain-size ranges, large molecules containing two or more heavy atoms are more predominant than lighter 'ices' - H2O, NH3, and CH4. It is possible that absorption due to these large molecules in the mantle may contribute to the observed 3-micron band in astronomical spectra.

Allen, M.↗

Photon-dominated regions around cool stars: The effects of the color temperature of the radiation field

We have investigated the influence of the color temperature of the illuminating radiation field on the chemical and thermal structure of photon-dominated regions (PDRs). We present the results of a study of the photoelectric efficiency of heating by large molecules such as polycyclic aromatic hydrocarbons (PAHs) and very small grains for radiation fields characterized by different effective temperatures. We show that the efficiency for cooler (T(sub eff) approximately = 6000-10,000 K) stars is at most an order of magnitude smaller than that for hotter (T(sub eff) approximately = 20,000-30,000 K) stars. While cooler radiation fields result in less ultraviolet photons capable of heating, the efficiency per absorbed photon is higher, because the grains become less positively charged. We also present detailed calculations of the chemistry and thermal balance for generic PDRs (n(sub 0) approximately = 10(exp 3), G(sub 0) approximately = 10(exp 3)). For cooler radiation fields, the H/H2 and C(+)/C/CO transition layers shift toward the surface of the PDR, because fewer photons are available to photodissociate H2 and CO and to ionize C. The dominant cooling lines are the (C II) 158 micron and the (O I) 63 micron lines for the hotter radiation fields, but cooling by CO becomes dominant for a color temperature of 6000 K or lower. The (C II)/CO and (O I)/CO ratios are found to be very good diagnostics for the color temperature of the radiation field.

Spaans, Marco↗

Titan as the Abode of Life

Titan is the only world we know other than Earth that has a liquid on its surface. It has a thick atmosphere composed of nitrogen and methane with a thick organic haze. There are lakes, rain, and clouds of methane and ethane. Here, we address the question of carbon-based life living in Titan liquids. Photochemically produced organics, particularly acetylene, in Titan's atmosphere could be a source of biological energy when reacted with atmospheric hydrogen. Light levels on the surface of Titan are more than adequate for photosynthesis but the biochemical limitations due to the few elements available in the environment may lead only to simple ecosystems that only consume atmospheric nutrients. Life on Titan may make use of the trace metals and other inorganic elements produced by meteorites as they ablate in the atmosphere. It is conceivable that H2O molecules on Titan could be used in a biochemistry that is rooted in hydrogen bonds in a way that metals are used in enzymes by life on Earth. Previous theoretical work has shown possible membrane structures in Titan liquids, azotosomes, composed of small organic nitrogen compounds, such as acrylonitrile. The search for a plausible information molecule for life in Titan liquids remains an open research topic - polyethers have been considered and shown to be insoluble at Titan temperatures. Possible search strategies for life on Titan include looking for unusual concentrations of certain molecules reflecting biological selection. Homochirality is a special and powerful example of such biology selection. Environmentally, a depletion of hydrogen in the lower atmosphere may be a sign of metabolism. A discovery of life in liquid methane and ethane would be our first compelling indication that the Universe is full of diverse and wondrous life forms.

H2O molecules on Titan↗

Novel Materials Containing Single-Wall Carbon Nanotubes Wrapped in Polymer Molecules

In this design, single-wall carbon nanotubes (SWNTs) have been coated in polymer molecules to create a new type of material that has low electrical conductivity, but still contains individual nanotubes, and small ropes of individual nanotubes, which are themselves good electrical conductors and serve as small conducting rods immersed in an electrically insulating matrix. The polymer is attached through weak chemical forces that are primarily non-covalent in nature, caused primarily through polarization rather than the sharing of valence electrons. Therefore, the electronic structure of the SWNT involved is substantially the same as that of free, individual (and small ropes of) SWNT. Their high conductivity makes the individual nanotubes extremely electrically polarizable, and materials containing these individual, highly polarizable molecules exhibit novel electrical properties including a high dielectric constant.

Smalley, Richard E.↗

The spatial distribution of infrared radiation from visible reflection nebulae

The emission at IRAS 12 and 25 micron bands of reflection nebulae is far in excess of that expected from the longer wavelength equilibrium thermal emission. The excess emission in the IRAS 12 micron band is a general phenomenon, seen in various components of interstellar medium such as IR cirrus clouds, H II regions, atomic and molecular clouds, and also normal spiral galaxies. This excess emission has been attributed to UV excited fluorescence in polycyclic aromatic hydrocarbon (PAH) molecules or to the effect of temperature fluctuations in very small grains. Results are presented of studies of IRAS data on reflection nebulae selected from the van den Bergh reflection nebulae sample. Detailed scans of flux ratio and color temperature across the nebulae were obtained in order to study the spatial distribution of IR emission. A model was used to predict the spatial distribution of IR emission from dust grains illuminated by a B type star. The model was also used to explore the excitation of the IRAS 12 micron band emission as a function of stellar temperature. The model predictions are in good agreement with the analysis of reflection nebulae, illuminated by stars with stellar temperature ranging from 21,000 down to 3,000 K.

Luan, Ling↗

Infrared Spectroscopy and Imaging Polarimetry of the Disk Around the T Tauri Star RNO 91

We present 3-5 micrometer spectra and a 2.2 micrometer polarimetric image of the T Tauri star RNO 91. We report the detection of three absorption bands centered at 3250 per cm (3.08 micrometer), 2139 per cm (4.68 micrometer), and 2165 per cm (4.62 micrometer) in spectra of RNO 91. These features are due to frozen H2O, CO, and possibly XCN along the line of sight toward RNO 91. Our 2187-2107 per cm spectrum of RNO 90, the only other T Tauri star in the dark cloud L43, does not show the CO or XCN absorption bands. By comparing our observed polarimetric image with modeled images of scattered light from bipolar nebulae or circumstellar disks as well as with known morphology of the RNO 91 bipolar outflow, we demonstrate that the reflection nebulosity seen in the near-infrared is most likely a circumstellar disklike structure with a radius of approximately 1700 AU. The location of both RNO 90 and RNO 91 in front of or near the front of L43 suggests that the intracloud optical depths toward both stars are small and, therefore, that the frozen H2O, CO, and XCN molecules are located on grains in circumstellar material around RNO 91 at distances from the central star of perhaps 10-1700 AU. This frozen material may represent precometary grains orbiting RNO 91.

Weintraub, David A.↗

How an Electron Beam (Eventually) Penetrates Ceramic Cloth

In anticipation of the International Space Welding Experiment (ISWE) the effect of an electron beam was investigated on Nextel AF-62 ceramic cloth designed to withstand temperatures up to 1427 C. It was anticipated that the cloth would take a static charge that would repel the beam and remain undamaged. It was found that after some seconds the impinging beam penetrated penetrated the cloth. Further, the penetration time went up significantly both at longer and at closer standoff distances. A tentative explanation appears to fit the observed facts. The electrons in the beam generate positive ions by collisions with the contaminant gas molecules in the vacuum chamber. The positive ions transfer a small but significant fraction of the beam power to the cloth. Under the impingement of the positive ions the cloth heats up until sufficient outgassing occurs to initiate arcing. Once arcing occurs the full beam power impinges on the cloth and, almost instantaneously, burns a hole.

Nunes, A. C., Jr.↗

Substantial reservoirs of molecular hydrogen in the debris disks around young stars

Circumstellar accretion disks transfer matter from molecular clouds to young stars and to the sites of planet formation. The disks observed around pre-main-sequence stars have properties consistent with those expected for the pre-solar nebula from which our own Solar System formed 4.5 Gyr ago. But the 'debris' disks that encircle more than 15% of nearby main-sequence stars appear to have very small amounts of gas, based on observations of the tracer molecule carbon monoxide: these observations have yielded gas/dust ratios much less than 0.1, whereas the interstellar value is about 100 (ref. 9). Here we report observations of the lowest rotational transitions of molecular hydrogen (H2) that reveal large quantities of gas in the debris disks around the stars beta Pictoris, 49 Ceti and HD135344. The gas masses calculated from the data are several hundreds to a thousand times greater than those estimated from the CO observations, and yield gas/dust ratios of the same order as the interstellar value.

unmanned↗

ALMA Observations of Molecular Complexity in the Large Magellanic Cloud: Probing the Star-forming Region N 160

Hot molecular cores represent one of the earliest stages of high mass star formation, yet the number of known extragalactic hot cores is currently very small (six). A typical Galactic hot core found around a forming massive star is small, dense, hot, and it is rich in complex organic molecules (COMs; six or more atoms including carbon). In this presentation, we report the results of 1.2 mm continuum and molecular line single-pointing observations with the Atacama Large Millimeter/submillimeter Array (ALMA) of the field in the Large Magellanic Cloud (LMC) we dubbed N160A–mm. The goal of our study is to investigate the chemical complexity in this region and search for hot cores. The LMC is an ideal location for studying hot core chemistry in an environment distinctly different from the Milky Way due to its lower metallicity and strong UV radiation. N160A–mm is located in the star-forming region N160 south of 30 Doradus. It hosts two dominant young stellar objects and water (H2O), methanol (CH3OH), and hydroxyl (OH) masers, indicating ongoing star formation. We detect six 1.2 mm continuum sources, five of which are associated with the CH3OH emission peaks and/or extended emission. Methyl cyanide (CH3CN), another COM, is found towards the brightest continuum source in N160A–mm (N160A–mm A), and smaller molecules typically associated with Galactic hot cores (e.g., SO2, SO) are detected in four sources. Using spectral modeling, we estimate the rotational temperatures and column densities of the continuum sources. Based on the derived temperature of above 100 K, we identify N160–mm A as a hot core candidate. Most of the sources in N160A–mm exhibit a complex kinematic structure, providing evidence for large scale motions in the region (e.g., outflows, rotation). We compare the molecular abundances measured for N160-mm A to those found in Galactic hot cores and other LMC hot cores to investigate the impact of the environment on hot core chemistry.

Amanda Broadmeadow↗

Antibodies Against Three Forms of Urokinase

Antibodies that bind to preselected regions of the urokinase molecule have been developed. These antibodies can be used to measure small quantities of each of three molecular forms of urokinase that could be contained in microsamples or conditioned media harvested from cultures of mammalian cells. Previously available antibodies and assay techniques do not yield both clear distinctions among, and measurements of, all three forms. Urokinase is a zymogen that is synthesized in a single-chain form, called ScuPA, which is composed of 411 amino acid residues (see figure). ScuPA has very little enzyme activity, but it can be activated in two ways: (1) by cleavage of the peptide bond lysine 158/isoleucine 159 and the loss of lysine 158 to obtain the high molecular-weight (HMW) form of the enzyme or (2) by cleavage of the bond lysine 135/lysine 136 to obtain the low-molecular-weight (LMW) form of the enzyme. The antibodies in question were produced in mice and rabbits by use of peptides as immunogens. The peptides were selected to obtain antibodies that bind to regions of ScuPA that include the lysine 158/isoleucine 159 and the lysine 135/lysine 136 bonds. The antibodies include monoclonal and polyclonal ones that yield indications as to whether either of these bonds is intact. The polyclonal antibodies include ones that preferentially bind to the HMW or LMW forms of the urokinase molecule. The monoclonal antibodies include ones that discriminate between the ScuPA and the HMW form. A combination of these molecular-specific antibodies will enable simultaneous assays of the ScuPA, HMW, and LMW forms in the same specimen of culture medium.

Morrison, Dennis R.↗

Computational fluid dynamics near the continuum limit

Two dimensional Navier-Stokes equations for a perfect gas are solved for hypersonic flow over a flat plate at Reynolds numbers ranging from continuum to the free molecule flow. In the transition flow regime, new slip boundary conditions are introduced, which reduce to the well-known slip conditions of Maxwell at small Knudsen numbers and yield the correct shear stress and heat transfer in the limiting case of free molecule flow. Comparison of the computed results with the existing experimental data and Monte Carlo calculations indicates that the continuum Navier-Stokes equations give surprisingly realistic results throughout the transition flow regime, when the new slip boundary conditions are used.

Maccormack, Robert W.↗

Laser Rayleigh and Raman Diagnostics for Small Hydrogen/oxygen Rockets

Localized velocity, temperature, and species concentration measurements in rocket flow fields are needed to evaluate predictive computational fluid dynamics (CFD) codes and identify causes of poor rocket performance. Velocity, temperature, and total number density information have been successfully extracted from spectrally resolved Rayleigh scattering in the plume of small hydrogen/oxygen rockets. Light from a narrow band laser is scattered from the moving molecules with a Doppler shifted frequency. Two components of the velocity can be extracted by observing the scattered light from two directions. Thermal broadening of the scattered light provides a measure of the temperature, while the integrated scattering intensity is proportional to the number density. Spontaneous Raman scattering has been used to measure temperature and species concentration in similar plumes. Light from a dye laser is scattered by molecules in the rocket plume. Raman spectra scattered from major species are resolved by observing the inelastically scattered light with linear array mounted to a spectrometer. Temperature and oxygen concentrations have been extracted by fitting a model function to the measured Raman spectrum. Results of measurements on small rockets mounted inside a high altitude chamber using both diagnostic techniques are reported.

Degroot, Wilhelmus A.↗