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Increasing accessibility to deep learning-based analytics for space biology: pretrained models, transfer learning, and analytics platform development

Biological systems react in complex ways to the stressors of spaceflight, and the data capturing these relationships is concomitantly high-dimensional and complex. Deep learning and machine learning approaches are increasingly popular as an analytical approach for space biosciences, due to their ability to model complex relationships in complex data. However, such approaches often require large datasets and extensive computational resources. New approaches that minimize data sizes and computational power needed to leverage machine learning, and resources that make these approaches accessible, are needed to increase accessibility and adoption of machine learning in the space biosciences. Transfer learning, in which a pretrained model of broad utility is trained on a large dataset, and subsequently reused on downstream applications for which data is more limited, is one approach to minimizing data and computational intensity of deep learning applications. This transfer learning approach results in more performant models in high-dimensional, low-sample-size settings such as space biology, as compared to training models on limited data from scratch. This presentation will outline efforts to generate pretrained models for the space biology community, and highlight transfer learning applications modeling microbial antibiotic resistance during spaceflight. Finally, in order to increase accessibility of these models and tools, as well as others, for the broader space biology community, we present a modeling and analysis platform facilitating machine learning applications in space biology. This platform streamlines machine learning training and analysis in a notebook format, facilitates download and use of space biology data from the NASA GeneLab database, and can be utilized on NASA-hosted servers or downloaded and hosted locally. This effort, as part of the AI4LS (Artificial Intelligence for Life in Space) working group, will increase accessibility, feasibility, and performance of machine learning approaches for the space biology community.

Adrienne Hoarfrost↗

DOE OSTI2026

Numerical Investigation of Fluid Flow and Space Charge in Liquid Argon Time Projection Chamber (LArTPC) Detectors

Overview This project focused on developing a high-fidelity numerical framework to simulate the multiphysics environment within Liquid Argon Time Projection Chamber (LArTPC) detectors. The primary objective was to characterize the complex interplay between ion transport, background fluid dynamics, and electric field distortions—a critical factor for the calibration and sensitivity of next-generation High Energy Physics experiments, such as DUNE. Technical Achievements The research successfully yielded a hybrid numerical space-charge solver utilizing a Cell-Centered Finite Volume Method (FVM) for ion transport coupled with a Finite Element Method (FEM) for electric potential. Key accomplishments include: • Verification & Validation: The 3-D solver was rigorously verified against 1-D analytical solutions, demonstrating high numerical accuracy in predicting space-charge-induced field deviations. • Field Distortion Analysis: 3D simulations revealed that space charge effects introduce significant non-uniformities in the electric field. Critically, the research identified that background LAr flow velocities, when comparable to ion drift velocities, markedly exacerbate these distortions. • Technology Transfer: The resulting source code and comprehensive user manuals were successfully transferred to collaborators at Fermilab, providing a portable computational tool for the broader scientific community. Challenges and Future Directions While the space-charge solver achieved all performance metrics, the integrated fluid dynamics modeling encountered convergence challenges stemming from the extreme 200-fold disparity in length scales between the detector's 37 mm inlet pipes and the 8-meter global domain. To address this, the project has identified a clear technical pivot toward Hierarchical Geometric Adaptive Mesh Refinement (HG-AMR). By implementing an h-type refinement strategy with hanging nodes, future iterations of this solver will be capable of resolving localized high-gradient inlet flows without the prohibitive computational costs of regular grids. This advancement, combined with data-driven uncertainty quantification based on MicroBooNE-style calibration, will enable the precise modeling of detector responses in large-scale cryogenic environments where direct measurement remains difficult. Impact The computational tools developed under this award provide a foundation for enhancing the energy resolution and spatial reconstruction of noble liquid detectors. By bridging the gap between theoretical fluid dynamics and experimental field calibration, this work supports the DOE’s mission to advance the frontiers of neutrino physics and dark matter detection.

42 ENGINEERING↗

DOE OSTI2021

Precise and accurate cosmology with CMB×LSS power spectra and bispectra

With the advent of a new generation of cosmological experiments that will provide high-precision measurements of the cosmic microwave background (CMB) and galaxies in the large-scale structure, it is pertinent to examine the potential of performing a joint analysis of multiple cosmological probes. In this paper, we study the cosmological information content contained in the one-loop power spectra and tree bispectra of galaxies cross-correlated with CMB lensing. We use the FFTLog method to compute angular correlations in spherical harmonic space, applicable for wide angles that can be accessed by forthcoming galaxy surveys. Here, we find that adding the bispectra and cross-correlations with CMB lensing offers a significant improvement in parameter constraints, including those on the total neutrino mass, M ν , and local non-Gaussianity amplitude, ƒ NL . In particular, our results suggest that the combination of the Vera C. Rubin Observatory's Legacy Survey of Space and Time (LSST) and CMB-S4 will be able to achieve σ(M ν )=42 meV from galaxy and CMB lensing correlations, and σ(M ν )=12 meV when further combined with the CMB temperature and polarization data, without any prior on the optical depth.

79 ASTRONOMY AND ASTROPHYSICS↗

NASA NTRS2012

Comparison of Computed and Measured Performance of a Pulsed Inductive Thruster Operating on Argon Propellant

Pulsed inductive plasma accelerators are electrodeless space propulsion devices where a capacitor is charged to an initial voltage and then discharged through a coil as a high-current pulse that inductively couples energy into the propellant. The field produced by this pulse ionizes the propellant, producing a plasma near the face of the coil. Once a plasma is formed if can be accelerated and expelled at a high exhaust velocity by the Lorentz force arising from the interaction of an induced plasma current and the magnetic field. A recent review of the developmental history of planar-geometry pulsed inductive thrusters, where the coil take the shape of a flat spiral, can be found in Ref. [1]. Two concepts that have employed this geometry are the Pulsed Inductive Thruster (PIT)[2, 3] and the Faraday Accelerator with Radio-frequency Assisted Discharge (FARAD)[4]. There exists a 1-D pulsed inductive acceleration model that employs a set of circuit equations coupled to a one-dimensional momentum equation. The model was originally developed and used by Lovberg and Dailey[2, 3] and has since been nondimensionalized and used by Polzin et al.[5, 6] to define a set of scaling parameters and gain general insight into their effect on thruster performance. The circuit presented in Fig. 1 provides a description of the electrical coupling between the current flowing in the thruster I1 and the plasma current I2. Recently, the model was upgraded to include an equation governing the deposition of energy into various modes present in a pulsed inductive thruster system (acceleration, magnetic flux generation, resistive heating, etc.)[7]. An MHD description of the plasma energy density evolution was tailored to the thruster geometry by assuming only one-dimensional motion and averaging the plasma properties over the spatial dimensions of the current sheet to obtain an equation for the time-evolution of the total energy. The equation set governing the dynamics of the coupled electrodynamic-current sheet system is composed of first-order, coupled ordinary differential equations that can be easily solved numerically without having to resort to much more complex 2-D finite element plasma simulations.

Polzin, Kurt A.↗

DOE OSTI2024

RandONets: Shallow networks with random projections for learning linear and nonlinear operators

Deep neural networks have been extensively used for the solution of both the forward and the inverse problem for dynamical systems. However, their implementation necessitates optimizing a high-dimensional space of parameters and hyperparameters. This fact, along with the requirement of substantial computational resources, pose a barrier to achieving high numerical accuracy, but also interpretability. Here, to address the above challenges, we present Random Projection-based Operator Networks (RandONets): shallow networks with random projections and tailor-made numerical analysis methods that learn accurately and fast linear and nonlinear operators. Building on previous works, we prove that RandOnets are universal approximators of linear and nonlinear operators. Due to their simplicity, RandONets provide a one-step transformation of the input space, facilitating interpretability. For the evaluation of their performance, we focus on operators of PDEs. We show, that RandONets outperform by several orders of magnitude, both in terms of numerical approximation accuracy and computational cost, the “vanilla” DeepONets. Hence, we believe that our method will trigger further developments in the field of scientific machine learning, for the development of new ‘’light”schemes that will provide high accuracy while reducing dramatically the computational cost. A MATLAB toolbox for RandONets, including demos, is available on GitHub at https://github.com/GianlucaFabiani/RandONets.

Interpretable machine learning↗

NASA NTRS2005

Cold Flow Plume Entrainment Test Final Report NTF Test Number 2456

As part of the Space Shuttle Return to Flight (RTF) program, Marshall Space Flight Center (MSFC) performed computational fluid dynamics (CFD) analysis to define the velocity flowfields around the Shuttle stack at liftoff. These CFD predicted velocity flowfields were used in debris transport analysis (DTA). High speed flows such as plumes induce or 'entrain' mass from the surrounding environment. Previous work had shown that CFD analysis over-predicts plume induced flows. Therefore, the DTA would tend to 1) predict more debris impacts, and 2) the debris velocity (and kinetic energy) of those impacts would be too high. At a November, 2004 peer-review it was recommended that the Liftoff DTA team quantify the uncertainty in the DTA caused by the CFD's over prediction of plume induced flow. To do so, the Liftoff DTA team needed benchmark quality data for plume induced flow to quantify the CFD accuracy and its effect on the DTA. MSFC's Nozzle Test Facility (NTF) conducted the "Nozzle Induced Flows test, P#2456" to obtain experimental data for plume induced flows for nozzle flow exhausting into q quiescent freestream. Planning for the test began in December, 2004 and the experimental data was obtained in February and March of 2005. The funding for this test was provided by MSFC's Space Shuttle Propulsion Systems Integration and Engineering office.

Ruf, Joseph H.↗

NASA NTRS1989

Ice/frost/debris assessment for space shuttle mission STS-27R, December 2, 1988

An Ice/Frost/Debris assessment was conducted for Space Shuttle Mission STS-27R. Debris inspections of the flight elements and launch pad are performed before and after launch. Ice/frost conditions are assessed by the use of computer programs, nomographs, and infrared scanner data during cryogenic loading of the vehicle followed by an on-pad visual inspection. High speed photography is viewed after launch to identify ice/debris sources and evaluate potential vehicle damage. The Ice/Frost/Debris conditions of Mission STS-27R and their effect on the Space Shuttle Program are documented.

Katnik, Gregory N.↗

NASA NTRS2014

An Experimental and Computational Study on Soot Formation in a Coflow Jet Flame Under Microgravity and Normal Gravity

Upon the completion of the Structure and Liftoff in Combustion Experiment (SLICE) in March 2012, a comprehensive and unique set of microgravity coflow diffusion flame data was obtained. This data covers a range of conditions from weak flames near extinction to strong, highly sooting flames, and enabled the study of gravitational effects on phenomena such as liftoff, blowout and soot formation. The microgravity experiment was carried out in the Microgravity Science Glovebox (MSG) on board the International Space Station (ISS), while the normal gravity experiment was performed at Yale utilizing a copy of the flight hardware. Computational simulations of microgravity and normal gravity flames were also carried out to facilitate understanding of the experimental observations. This paper focuses on the different sooting behaviors of CH4 coflow jet flames in microgravity and normal gravity. The unique set of data serves as an excellent test case for developing more accurate computational models.Experimentally, the flame shape and size, lift-off height, and soot temperature were determined from line-of-sight flame emission images taken with a color digital camera. Soot volume fraction was determined by performing an absolute light calibration using the incandescence from a flame-heated thermocouple. Computationally, the MC-Smooth vorticity-velocity formulation was employed to describe the chemically reacting flow, and the soot evolution was modeled by the sectional aerosol equations. The governing equations and boundary conditions were discretized on an axisymmetric computational domain by finite differences, and the resulting system of fully coupled, highly nonlinear equations was solved by a damped, modified Newtons method. The microgravity sooting flames were found to have lower soot temperatures and higher volume fraction than their normal gravity counterparts. The soot distribution tends to shift from the centerline of the flame to the wings from normal gravity to microgravity.

microgravity↗

DOE OSTI2025

Understanding and design of interstitial oxygen conductors

Highly efficient oxygen-active materials that react with, absorb, and transport oxygen is essential for fuel cells, electrolyzers and related applications. While vacancy-mediated oxygen-ion conductors have long been the focus of research, they are limited by high migration barriers at intermediate temperatures (400–600 °C), which hinder their practical applications. In contrast, interstitial oxygen conductors exhibit significantly lower migration barriers enabling higher ionic conductivity at lower temperatures. This review systematically examines both well-established and recently identified families of interstitial oxygen-ion conductors, focusing on how their unique structural motifs such as corner-sharing polyhedral frameworks, isolated polyhedral, and cage-like architectures, facilitate low migration barriers through interstitial and/or interstitialcy diffusion mechanisms. A central discussion of this review focuses on the evolution of design strategies, from targeted donor doping, element screening, to physical-intuition descriptor material screening and machine learning approach, which leverage computational tools to explore vast chemical spaces in search for new interstitial conductors. The success of these strategies demonstrates that a significant, largely unexplored space remains for discovering high-performing interstitial oxygen conductors. Crucial features enabling high-performance interstitial oxygen diffusion include the availability of electrons for oxygen reduction and sufficient structural flexibility with accessible volume for interstitial accommodation and migration. This review concludes with a forward-looking perspective, proposing a knowledge-driven methodology that integrates current understanding with data-centric approaches to identify promising interstitial oxygen conductors outside traditional search paradigms. These approaches are expected to significantly accelerate the development of high-performance interstitial oxygen conductors for a variety of oxygen-active applications, ultimately paving the way for more efficient and sustainable energy technologies.

Interstitial oxygen conductors↗

DOE OSTI2023

Accelerated alloy discovery using synthetic data generation and data mining

The search for new alloys with improved properties is never ending with infinite combinations and amounts of alloying elements in the alloy. Advancements in machine learning have made navigating this enormous search space feasible. However, training the machine learning models and tuning their hyper-parameters to make accurate predictions can be time-consuming and often require high-performance computing resources. Furthermore, the quality of the predictions depend on the availability of sufficient training data. Here, we present a generic approach to accelerate alloy discovery by coupling high throughput CALPHAD calculations, synthetic data generation, and data mining. Finally, as a demonstration of the approach, we design super bainitic steels that form bainite at 200 C in lower transformation times.

36 MATERIALS SCIENCE↗

DOE OSTI2021

Optimized finite-build stellarator coils using automatic differentiation

A new stellarator coil design code is introduced that optimizes the position and winding pack orientation of finite-build coils. The new code, called flexible optimized curves in space using automatic differentiation (AD) and finite build (FOCUSADD), performs gradient-based optimization in a high-dimensional, non-convex space. The derivatives with respect to parameters of finite-build coils are easily and efficiently computed using AD. FOCUSADD parametrizes coil positions in free space using a Fourier series and uses a multi-filament approximation to the coil winding pack. The orientation of the winding pack is parametrized with a Fourier series and can be optimized as well. Optimized finite-build coils for a Wendelstein 7-X (W7-X)-like stellarator are found, and compared with filamentary coil results. The final positions of optimized finite-build W7-X-like coils are shifted, on average, by approximately 2.5 mm relative to optimized filamentary coils. These results suggest that finite-build effects should be accounted for in the optimization of stellarators with low coil tolerances.

43 PARTICLE ACCELERATORS↗

NASA NTRS1989

Transportable telemetry workstation for future distributed system environments

A Transportable Telemetry Workstation (TTW) has been developed to meet the need for reduction in size and cost per station while maintaining high performance specifications in distributed system environments. The TTW consists primarily of the adaptation of NASA's Goddard Space Flight Center VLSI components and system architecture to a personal computer and its architecture. The overall system, the architecture, the TTW Controller Card, TTW Synchronizer Card, custom backplane bus, and system software structure are described.

Collins, Aaron↗

NASA NTRS1989

Advanced high area ratio nozzles

The objective is to develop computational techniques for the design of high-area-ratio nozzles and to validate these models by comparison with experiments and computations using other codes. Performance computations were added to the PARC2D code and the performance of the space shuttle main engine (SSME) nozzle was computed for inviscid, laminar and turbulent flow assuming a perfect gas with gamma = 1.2. The PARC2D code was modified in a non-CASP (Center for Advanced Space Propulsion) project to compute equilibrium flow about hypersonic blunt bodies. Progress has been made toward modifying this code to compute equilibrium H2/O2 flow through the SSME and related nozzles.

Raiszadeh, Farhad↗

NASA NTRS2002

Multi-Zone Liquid Thrust Chamber Performance Code with Domain Decomposition for Parallel Processing

Computational Fluid Dynamics (CFD) has considerably evolved in the last decade. There are many computer programs that can perform computations on viscous internal or external flows with chemical reactions. CFD has become a commonly used tool in the design and analysis of gas turbines, ramjet combustors, turbo-machinery, inlet ducts, rocket engines, jet interaction, missile, and ramjet nozzles. One of the problems of interest to NASA has always been the performance prediction for rocket and air-breathing engines. Due to the complexity of flow in these engines it is necessary to resolve the flowfield into a fine mesh to capture quantities like turbulence and heat transfer. However, calculation on a high-resolution grid is associated with a prohibitively increasing computational time that can downgrade the value of the CFD for practical engineering calculations. The Liquid Thrust Chamber Performance (LTCP) code was developed for NASA/MSFC (Marshall Space Flight Center) to perform liquid rocket engine performance calculations. This code is a 2D/axisymmetric full Navier-Stokes (NS) solver with fully coupled finite rate chemistry and Eulerian treatment of liquid fuel and/or oxidizer droplets. One of the advantages of this code has been the resemblance of its input file to the JANNAF (Joint Army Navy NASA Air Force Interagency Propulsion Committee) standard TDK code, and its automatic grid generation for JANNAF defined combustion chamber wall geometry. These options minimize the learning effort for TDK users, and make the code a good candidate for performing engineering calculations. Although the LTCP code was developed for liquid rocket engines, it is a general-purpose code and has been used for solving many engineering problems. However, the single zone formulation of the LTCP has limited the code to be applicable to problems with complex geometry. Furthermore, the computational time becomes prohibitively large for high-resolution problems with chemistry, two-equation turbulence model, and two-phase flow. To overcome these limitations, the LTCP code is rewritten to include the multi-zone capability with domain decomposition that makes it suitable for parallel processing, i.e., enabling the code to run every zone or sub-domain on a separate processor. This can reduce the run time by a factor of 6 to 8, depending on the problem.

Homayun K. Navaz↗

NASA NTRS1993

Two- and Three-dimensional High Performance, Patterned Overlay Multi-chip Module Technology

A two- and three-dimensional multi-chip module technology was developed in response to the continuum in demand for increased performance in electronic systems, as well as the desire to reduce the size, weight, and power of space systems. Though developed to satisfy the needs of military programs, such as the Strategic Defense Initiative Organization, the technology, referred to as High Density Interconnect, can also be advantageously exploited for a wide variety of commercial applications, ranging from computer workstations to instrumentation and microwave telecommunications. The robustness of the technology, as well as its high performance, make this generality in application possible. More encouraging is the possibility of this technology for achieving low cost through high volume usage.

Lyke, James↗

DOE OSTI2021

Robust Importance Sampling for Bayesian Model Calibration with Spatio-Temporal Data

This paper addresses two challenges in Bayesian calibration: 1) computational speed of existing sampling algorithms, and 2) calibration with spatio-temporal responses. The commonly used Markov Chain Monte Carlo (MCMC) approaches require many sequential model evaluations making the computational expense prohibitive. This paper proposes an efficient sampling algorithm: iterative importance sampling with genetic algorithm (IISGA). While iterative importance sampling enables computational efficiency, the genetic algorithm enables robustness by preventing sample degeneration and avoids getting stuck in multimodal search spaces. An inflated likelihood further enables robustness in high-dimensional parameter spaces by enlarging the target distribution. Spatio-temporal data complicate both surrogate modeling, which is necessary for expensive computational models, and the likelihood estimation. In this work, singular value decomposition is investigated for reducing the high-dimensional field data to a lower-dimensional space prior to Bayesian calibration. Then the likelihood is formulated and Bayesian inference is performed in the lower-dimension, latent space. An illustrative example is provided to demonstrate IISGA relative to existing sampling methods, and then IISGA is employed to calibrate a thermal battery model with 26 uncertain calibration parameters and spatio-temporal response data.

97 MATHEMATICS AND COMPUTING↗

DOE OSTI2025

CHEMREASONER: Heuristic Search over a Large Language Model’s Knowledge Space using Quantum-Chemical Feedback

The discovery of new catalysts is essential for the design of new and more efficient chemical processes in order to transition to a sustainable future. We introduce an AI-guided computational screening framework unifying linguistic reasoning with quantum-chemistry based feedback from 3D atomistic representations. Our approach formulates catalyst discovery as an uncertain environment where an agent actively searches for highly effective catalysts via the iterative combination of large language model (LLM)-derived hypotheses and atomistic graph neural network (GNN)-derived feedback. Identified catalysts in intermediate search steps undergo structural evaluation based on spatial orientation, reaction pathways, and stability. Scoring functions based on adsorption energies and barriers steer the exploration in the LLM's knowledge space toward energetically favorable, high-efficiency catalysts. We introduce planning methods that automatically guide the exploration without human input, providing competitive performance against expert-enumerated chemical descriptor-based implementations. By integrating language-guided reasoning with computational chemistry feedback, our work pioneers AI-accelerated, trustworthy catalyst discovery.

artificial intelligence↗

NASA NTRS2017

Classification of Wildfires from MODIS Data Using Neural Networks

Wildfires are destructive to both life and property, which necessitates an approach to quickly and autonomously detect these events from orbital observatories. This talk will introduce a neural network based approach for classifying wildfires in MODIS multispectral data, and will show how it could be applied to a constellation of low-cost CubeSats. The approach combines training a deep neural network on the ground using high performance consumer GPUs, with a highly optimized inference system running on a flight-proven embedded processor. Normally neural networks execute on hardware orders of magnitude more powerful than anything found in a space-based computer, therefore the inference system is designed to be performance even on the most modest of platforms. This implementation is able to be significantly more accurate than previous neural network implementations, while also approaching the accuracy of the state-of-the-art MODFIRE data products.

Artificial Intelligence↗