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At least 271 records · Page 15

Self-Assembly of an α-Helical Peptide into a Crystalline Two-Dimensional Nanoporous Framework

Sequence-specific peptides have been demonstrated to self-assemble into structurally defined nanoscale objects including nanofibers, nanotubes, and nanosheets. The latter structures display significant promise for the construction of hybrid materials for functional devices due to their extended planar geometry. Realization of this objective necessitates the ability to control the structural features of the resultant assemblies through the peptide sequence. The design of a amphiphilic peptide, 3FD-IL, is described that comprises two repeats of a canonical 18 amino acid sequence associated with straight α-helical structures. Peptide 3FD-IL displays 3-fold screw symmetry in a helical conformation and self-assembles into nanosheets based on hexagonal packing of helices. Biophysical evidence from TEM, cryo-TEM, SAXS, AFM, and STEM measurements on the 3FD-IL nanosheets support a structural model based on a honeycomb lattice, in which the length of the peptide determines the thickness of the nanosheet and the packing of helices defines the presence of nanoscale channels that permeate the sheet. The honeycomb structure can be rationalized on the basis of geometrical packing frustration in which the channels occupy defect sites that define a periodic superlattice. In conclusion, the resultant 2D materials may have potential as materials for nanoscale transport and controlled release applications.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Right-Handed Helical Foldamers Consisting of De Novo d -AApeptides

New types of foldamer scaffolds are formidably challenging to design and synthesize, yet highly desirable as structural mimics of peptides/proteins with a wide repertoire of functions. In particular, the development of peptidomimetic helical foldamers holds promise for new biomaterials, catalysts, and drug molecules. Unnatural l-sulfono-γ-AApeptides were recently developed and shown to have potential applications in both biomedical and material sciences. However, d-sulfono-γ-AApeptides, the enantiomers of l-sulfono-γ-AApeptides, have never been studied due to the lack of high-resolution three-dimensional structures to guide structure-based design. Herein, we report the first synthesis and X-ray crystal structures of a series of 2:1 l-amino acid/d-sulfono-γ-AApeptide hybrid foldamers, and elucidate their folded conformation at the atomic level. Single-crystal X-ray crystallography indicates that this class of oligomers folds into well-defined right-handed helices with unique helical parameters. The helical structures were consistent with data obtained from solution 2D NMR, CD studies, and molecular dynamics simulations. Our findings are expected to inspire the structure-based design of this type of unique folding biopolymers for biomaterials and biomedical applications.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Insights into Magneto-Optics of Helical Conjugated Polymers

Materials with magneto-optic (MO) properties have enabled critical fiber-optic applications and highly sensitive magnetic field sensors. While traditional MO materials are inorganic in nature, new generations of MO materials based on organic semiconducting polymers could allow increased versatility for device architectures, manufacturing options, and flexible mechanics. However, the origin of MO activity in semiconducting polymers is far from understood. In this paper, we report high MO activity observed in a chiral helical poly-3-(alkylsulfone)thiophene (P3AST), which confirms a new design for the creation of a giant Faraday effect with Verdet constants up to (7.63 ± 0.78) × 10 4 deg T –1 m –1 at 532 nm. We have determined that the sign of the Verdet constant and its magnitude are related to the helicity of the polymer at the measured wavelength. The Faraday rotation and the helical conformation of P3AST are modulated by thermal annealing, which is further supported by DFT calculations and MD simulations. Our results demonstrate that helical polymers exhibit enhanced Verdet constants and expand the previous design space for polythiophene MO materials that was thought to be limited to highly regular lamellar structures. Here, the structure–property studies herein provide insights for the design of next-generation MO materials based upon semiconducting organic polymers.

36 MATERIALS SCIENCE↗

Magnetic brightening and nanoscale imaging of spin-polarized helical edge modes in ZrTe 5

Efficient charge transport remains a fundamental challenge for nanoelectronic devices, as their performance is constrained by high dissipation and the impedance mismatch between high-frequency signal sources and nanoscale circuit interfaces. Although topologically protected helical edge modes offer a dissipationless and backscattering-resilient alternative, achieving nanoscale control over these modes requires direct visualization of their spatial electrodynamics, especially under high-frequency operation. Here, by utilizing cryogenic magneto-infrared scattering-type scanning near-field optical microscopy (cm-IR-sSNOM), we image spin-polarized helical edge channels in ZrTe 5 at the nanoscale, revealing magnetic-field-induced brightening as a high-frequency electrodynamic signature of robust topological edge modes. Operating at 1.8 K and under a magnetic field of up to 5 T, we observe the emergence of edge-state polarizability at infrared frequencies that is notably resilient to the magnetic gaps that typically quench d.c. and microwave edge transport. Our results reveal a topological ‘two-lane’ spatial reorganization in which an external magnetic field induces a spin-population imbalance between counterpropagating edge modes. Favoured helical branches are confined against physical boundaries to activate a net infrared near-field contrast. This electrodynamic response scales linearly with the number of atomic layers, which confirms that individual layers in ZrTe 5 preserve their discrete quantum spin Hall identities. These findings may be useful for developing topological spintronic devices, as the magnetic infrared tunability of helical edge channels provides a pathway for low-loss nanoscale interconnects and high-speed information processing.

36 MATERIALS SCIENCE↗

Note: Helical nanobelt force sensors

We present the fabrication and characterization of helical nanobelt force sensors. These self-sensing force sensors are based on the giant piezoresistivity of helical nanobelts. The three-dimensional helical nanobelts are self-formed from 27 nm-thick n-type InGaAs/GaAs bilayers using rolled-up techniques, and assembled onto electrodes on a micropipette using nanorobotic manipulations. The helical nanobelt force sensors can be calibrated using a calibrated atomic force microscope cantilever system under scanning electron microscope. Thanks to their giant piezoresistance coefficient (515 Multiplication-Sign 10{sup -10} Pa{sup -1}), low stiffness (0.03125 N/m), large-displacement capability ({approx}10 {mu}m), and good fatigue resistance, they are well suited to function as stand-alone, compact ({approx}20 {mu}m without the plug-in support), light ({approx}5 g including the plug-in support), versatile and large range ({approx}{mu}N) and high resolution ({approx}nN) force sensors.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Enhanced performance of core-shell structured polyaniline at helical carbon nanotube hybrids for ammonia gas sensor

A core-shell structured hybrid of polyaniline at helical carbon nanotubes was synthesized using in situ polymerization, which the helical carbon nanotubes were uniformly surrounded by a layer of polyaniline nanorods array. More interestingly, repeatable responses were experimentally observed that the sensitivity to ammonia gas of the as-prepared helical shaped core-shell hybrid displays an enhancement of more than two times compared to those of only polyaniline or helical carbon nanotubes sensors because of the peculiar structures with high surface area. This kind of hybrid comprising nanorod arrays of conductive polymers covering carbon nanotubes and related structures provide a potential in sensors of trace gas detection for environmental monitoring and safety forecasting.

36 MATERIALS SCIENCE↗

Discrete helical modes in imploding and exploding cylindrical, magnetized liners

Discrete helical modes have been experimentally observed from implosion to explosion in cylindrical, axially magnetized ultrathin foils (B z = 0.2 - 2.0 T) using visible self-emission and laser shadowgraphy. The striation angle of the helices, phi, was found to increase during the implosion and decrease during the explosion, despite the large azimuthal magnetic field (>40 T). Here, these helical striations are interpreted as discrete, non-axisymmetric eigenmodes that persist from implosion to explosion, obeying the simple relation $\phi$ = m/kR, where m, k, and R are the azimuthal mode number, axial wavenumber, and radius, respectively. Experimentally, we found that (a) there is only one, or at the most two, dominant unstable eigenmode, (b) there does not appear to be a sharp threshold on the axial magnetic field for the emergence of the non-axisymmetric helical modes, and (c) higher axial magnetic fields yield higher azimuthal modes.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Properties of the electrostatically driven helical plasma state

A novel plasma state has been found [Akçay et al ., Phys. Plasmas 24 , 052503 (2017)] in the presence of a uniform applied axial magnetic field in periodic cylindrical geometry. This state is driven by external electrostatic fields provided by helical electrodes with a ($m=1,n=1$) (helical) symmetry where $m$ and $n$ represent the poloidal and axial harmonics. The resulting plasma is a function of the cylinder radius $r < r_w$ and helical angle $u=mθ-nζ$, where θ is the poloidal angle, and $ζ=z/R$ is the normalized axial coordinate in the context of a periodic cylinder. In this reference, the strongly driven form of the state was found to have a strong axial mean current density, with a mean-field line safety factor $q_0(r)$ just above the pitch of the electrodes m/n=1 in the interior, where the plasma is nearly force-free. However, at the edge the current density has a component perpendicular to the magnetic field B. This perpendicular current density drives nearly Alfvénic helical plasma flows, a notable feature of these states. This state is being studied for its possible application in $DC$ electrical transformers. We present results on several issues of importance for these applications: the transient leading to the steady state; the twist and writhe of the field lines and their relation with the current density; the properties of the current density streamlines and length of the current density lines connected to the electrodes; the sensitivity to changes in the velocity boundary conditions; the effect of varying the radial resistivity profile; and the effects of a concentrated electrode potential

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Direct measurements of the 3D plasma velocity in single-helical-axis RFP plasmas

The first local velocity measurements of helical equilibrium plasmas in the Reversed Field Pinch (RFP) Single Helical Axis (SHAx) state using a Charge Exchange Recombination Spectroscopy (CHERS) diagnostic are presented. Measurements show strong axisymmetric and non-axisymmetric flow, with n ¼ 5 components of flow related to the ðm; nÞ¼ð1; 5Þ dominant magnetic mode on the order of the axisymmetric flow in certain regions of the plasma, as well as significant n > 5 flow. Flow measurements are compared with NIMROD simulations of visco-resistive, single-fluid MHD in toroidal and cylindrical geometries with limited axial periodicity. Both measurements and the simulation with toroidal geometry show stronger inboard flows relative to the outboard flows, which is attributed to the toroidal geometry of the device. In the experiment, the n ¼ 5 component of flow is phase shifted from the reconnection-like flow pattern observed in the single-fluid simulations, possibly due to decoupling of the ion and electron fluids over much of the plasma. Finally, the strength of the helical angular flow shear relative to the critical shear necessary to disrupt nonlinear coupling between tearing modes is calculated around the helical magnetic axis. The shear in the measured flow is on the order of the theoretical critical threshold needed to nonlinearly decouple modes, but the measurement uncertainty in the gradient of the flow is large.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

On Galilean invariance of mean kinetic helicity

While kinetic helicity is not Galilean invariant locally, it is known [Moffatt, J. Fluid Mech. 35, 117 (1969)] that its spatial integral quantifies the degree of knottedness of vorticity field lines. Being a topological property of the flow, mean kinetic helicity is Galilean invariant. Here, we provide a direct mathematical proof that kinetic helicity is Galilean invariant when spatially integrated over regions enclosed by vorticity surfaces, i.e., surfaces of zero vorticity flux. Here, we also discuss so-called relative kinetic helicity, which is Galilean invariant when integrated over any region in the flow.

42 ENGINEERING↗

Taylor limit studies for local helicity injection plasma startup

Solenoid-free tokamak startup techniques can simplify the design and reduce the cost of tokamak-based fusion energy systems. The newly commissioned Pegasus-III spherical tokamak provides a dedicated platform for developing a scalable solenoid-free startup approach. Local helicity injection (LHI) is one promising technique being developed on Pegasus-III, which uses compact edge current sources to drive open field line current I inj that is redistributed via helicity-conserving instabilities to initiate tokamak plasmas. These instabilities relax the system toward a minimum energy state described by Taylor relaxation theory. This relaxation process imposes a global current limit for LHI plasmas, referred to as the Taylor limit I TL ⁠, which can dictate the plasma current I p evolution. Experiments on Pegasus and Pegasus-III show that increasing this limit leads to more effective utilization of the available helicity input and higher I p plasmas. Initial Pegasus-III experiments have verified the expected I TL $\varpropto$ ( I inj B T ) 1/2 scaling holds for B T and I inj up to 0.3 T on axis and 12 kA ⁠, respectively. Additionally, data from different injector arrays show that the width of the injector aperture directly alters I TL and can be leveraged for future injector design optimization. Throughout these scaling studies, discharges were overdriven at I p = I TL by providing excess helicity input. Intermittent bursts of n = 1 magnetic activity consistent with large-scale reconnection events occurred more often as the system was increasingly overdriven leading to a flattening of the λ = μ 0 J ∥ / |B| profile, where J ∥ is the parallel current density.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Rotation of electrothermal-instability-driven overheating structure due to helically oriented surface magnetic field on a high-current-density aluminum rod

Experiments on the 1-MA, 100-ns-rise-time Mykonos Facility demonstrate rotation of electrothermal instability (ETI)-driven overheating structure on 1.00-mm-diameter, 10-nm-surface roughness, 99.999%-pure aluminum rods, which are pulsed with helically polarized surface magnetic field. Rods are machined to include pairs of 10-micron-scale quasi-hemispherical voids or “engineered defects (ED)” which provide the dominant current density perturbation from which ETI grows most rapidly. Experiments include an axial magnetic field component through the addition of a helically wound return-current electrode or “helical return can (HRC).” For a given HRC design, azimuthal field (B ɵ ) and axial field (B z ) components rise at a prescribed and fixed ratio, driving an increasing magnetic field of constant polarization at the rod's surface; most experiments generated surface magnetic field at a 15-degree field polarization angle (from horizontal) defined as ɸ B = arctan(B z /B ɵ ). ETI-driven emission patterns from individual ED are observed to rotate along ɸ B , while emission patterns from dielectric-coated ED pairs are shown to elongate and preferentially merge along ɸ B , in qualitative agreement with 3D-magnetohydrodynamic simulations. These data strongly support that for a randomized distribution of current density perturbations on a high-current density conductor, nearby perturbations will favorably merge about ɸ B , with the degree of merging increasing with current. Such observations offer fundamental new understanding of the seeding mechanisms of the helical magneto-Rayleigh Taylor (MRT) instabilities observed from axially magnetized magnetically driven imploding liners.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Nanoscale dynamics of Dynamin 1 helices reveals squeeze-twist deformation mode critical for membrane fission

Dynamin 1 (Dyn1) GTPase, a principal driver of membrane fission during synaptic endocytosis, self-assembles into short mechanoactive helices cleaving the necks of endocytic vesicles. While structural information about Dyn1 helix is abundant, little is known about the nanoscale dynamics of the helical scaffolding at the moment of fission, complicating mechanistic understanding of Dyn1 action. To address the role of the helix dynamics in fission, we used High-Speed Atomic Force Microscopy (HS-AFM) and fluorescence microscopy to track and compare the spatiotemporal characteristics of the helices formed by wild-type Dyn1 and its K44A mutant impaired in GTP hydrolysis on minimal lipid membrane templates. In the absence of nucleotide, membrane-bound WT Dyn1 and K44A Dyn1 self-assembled into tubular protein scaffolding of similar diameter encaging the lipid bilayer. In both cases, the GTP addition caused scaffold constriction coupled with formation of 20 to 30 nm nanogaps in the protein coverage. While both proteins reached scaffold diameters characteristic for membrane superconstriction causing fission, the fission was detected only with WT Dyn1. We associated the fission activity with the dynamic evolution of the nanogaps: K44A Dyn1 gaps were static, while WT Dyn1 gaps actively evolved via repetitive nonaxisymmetric constriction-bending deformations caused by localized GTP hydrolysis. Modeling of the deformations implicated filament twist as an additional deformation mode which combines with superconstriction to facilitate membrane fission. Our results thus show that the dynamics of the Dyn1 helical scaffold goes beyond radial constriction and involves nonaxisymmetric deformations, where filament twist emerges as a critical driver of membrane fission.

59 BASIC BIOLOGICAL SCIENCES↗

INITIATION OF CORONAL MASS EJECTION AND ASSOCIATED FLARE CAUSED BY HELICAL KINK INSTABILITY OBSERVED BY SDO/AIA

In this paper, we present multiwavelength observations of helical kink instability as a trigger of a coronal mass ejection (CME) which occurred in active region NOAA 11163 on 2011 February 24. The CME was associated with an M3.5 limb flare. High-resolution observations from the Solar Dynamics Observatory/Atmospheric Imaging Assembly suggest the development of helical kink instability in the erupting prominence, which implies a flux rope structure of the magnetic field. A brightening starts below the apex of the prominence with its slow rising motion ({approx}100 km s{sup -1}) during the activation phase. A bright structure, indicative of a helix with {approx}3-4 turns, was transiently formed at this position. The corresponding twist of {approx}6{pi}-8{pi} is sufficient to generate the helical kink instability in a flux rope according to recently developed models. A slowly rising blob structure was subsequently formed at the apex of the prominence, and a flaring loop was observed near the footpoints. Within 2 minutes, a second blob was formed in the northern prominence leg. The second blob erupts (like a plasmoid ejection) with the detachment of the northern prominence leg, and flare intensity maximizes. The first blob at the prominence apex shows rotational motion in the counterclockwise direction in the plane of sky, interpreted as the unwinding motion of a helix, and it also erupts to give the CME. RHESSI hard X-ray (HXR) sources show the two footpoint sources and a loop-top source during the flare. We found RHESSI HXR flux, soft X-ray flux derivative, and CME acceleration in the low corona correlate well, which is in agreement with the standard flare model (CSHKP). We also discuss the possible role of ballooning as well as torus instabilities in driving the CME. We conclude that the CME and flare were triggered by the helical kink instability in a flux rope and accelerated mainly by the torus instability.

79 ASTRONOMY AND ASTROPHYSICS↗

Passive deconfinement of runaway electrons using an in-vessel helical coil

A helical coil designed to passively generate non-axisymmetric fields during a plasma disruption is shown (via electromagnetic analysis, linear MHD modeling, and relativistic drift orbit tracing) to be effective at deconfining runaway electrons (REs) on a time scale significantly faster than the plasma current quench. Magnetic equilibria from DIII-D RE-producing scenarios are used to calculate the toroidal electric field generated during the current quench phase of a disruption, which in turn drives current in the proposed n = 1 in-vessel helical coil, without the need for any external power supplies or disruption detection or prediction techniques. Simulations of the plasma evolution using the TokSys GS Evolve code predict the inductive coupling of coil currents up to 12% of the pre-disruption plasma current into the helical coil. The coil geometry is parametrically varied to maximize both the non-resonant and resonant components of the 3D magnetic perturbation, resulting in δB/B ≈ 10 –2 and a vacuumisland overlapwidth of up to 0.7ψ N . The REORBIT module of the MARS-F code is used to model the full non-axisymmetric magnetic field and trace RE drift orbits to determine the effect on RE deconfinement, with up to 70% of the RE orbits lost after 0.2 ms. A two-stage evolution of the RE orbit loss fraction is observed to be caused by resonant trapping between multiple magnetic island chains. Finally, electromagnetic and thermal stresses on the coil are calculated to be within operational limits for installation in DIII-D, and scale favorably to a reactor-size device. Furthermore, these findings motivate future experimental study of the helical coil concept in DIII-D or other tokamaks.

3D coil↗

Off forward non- s -channel helicity conserving contributions to exclusive vector quarkonium production from the spin dependent BFKL Pomeron

A novel contribution to off forward, exclusive vector quarkonium production, γ(*)+p → V+p, at high energy is derived which corresponds to a t-channel exchange of a Balitsky-Fadin-Kuraev-Lipatov (BFKL) hard Pomeron, with a helicity flip of the proton. This “spin-dependent BFKL Pomeron” is required in a consistent expansion in powers of the momentum transfer t ≈−Δ$^{2}_{⊥}$ beyond first order. The spin-dependent Pomeron violates s-channel helicity conservation at O(Δ$^{2}_{⊥}$), and beyond. Expanding to leading twist only, it corresponds to generalized parton distributions E g (x,t) for vanishing skewness. We derive explicit expressions for the eikonal BFKL amplitudes, to all orders in dipole size times momentum transfer, for all helicity configurations of the particles in the initial and final states. We also provide numerical estimates of the helicity flip two gluon exchange amplitude at moderate x from a light cone quark model of the proton. The spin dependent BFKL Pomeron could, in principle, be discovered via double spin asymmetries in e+p → e+p+J/ψ with a transversely polarized proton and longitudinally polarized electron in the initial state.

Deep inelastic scattering↗

Protected helical transport in magnetically doped quantum wires: Beyond the one-dimensional paradigm

One-dimensional (1D) quantum wires, which are functionalized by magnetic ad-atoms, can host ballistic helical transport. Helicity protects transport from an undesirable influence of material imperfections and makes the magnetically doped wire very promising elements for nanoelectronics and spintronics. However, fabricating purely 1D conductors is experimentally very challenging and not always feasible. In this paper, we show that the protected helical transport can exist even inquasi-1D wires. We model the quasi-1D magnetically doped wire as two coupled dense 1D Kondo chains. Each chain consists of itinerant electrons interacting with localized quantum magnetic moments - Kondo impurities. We have analyzed the regimes of weak-, intermediate- and strong inter-chain coupling and found conditions necessary for the origin of the aforementioned protected transport. Our results give a push for experimental realizations of the helical states in magnetically doped wires.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Hydrodynamic relaxation of spin helices

Motivated by recent cold-atom experiments, here we study the relaxation of spin helices in quantum XXZ spin chains. The experimentally observed relaxation of spin helices follows scaling laws that are qualitatively different from linear-response transport. We construct a theory of the relaxation of such spin helices, combining generalized hydrodynamics with diffusive corrections and a generalized form of the local density approximation. Although helices are far from local equilibrium, our hydrodynamic approach reproduces the experimentally observed relaxational dynamics and also predicts the late-time relaxation, which is outside the experimentally accessible timescales. In particular, our theory explains the existence of temporal regimes with apparent anomalous diffusion, as well as the asymmetry between positive and negative anisotropy regimes at short and intermediate times.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗