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NASA NTRS2013

Dataset Lifecycle Policy

The presentation focused on describing a new dataset lifecycle policy that the NASA Physical Oceanography DAAC (PO.DAAC) has implemented for its new and current datasets to foster improved stewardship and consistency across its archive. The overarching goal is to implement this dataset lifecycle policy for all new GHRSST GDS2 datasets and bridge the mission statements from the GHRSST Project Office and PO.DAAC to provide the best quality SST data in a cost-effective, efficient manner, preserving its integrity so that it will be available and usable to a wide audience.

best practices↗

NASA NTRS2017

Evaluating Soil Moisture Retrievals from ESA's SMOS and NASA's SMAP Brightness Temperature Datasets

Two satellites are currently monitoring surface soil moisture (SM) using L-band observations: SMOS (Soil Moisture and Ocean Salinity), a joint ESA (European Space Agency), CNES (Centre national d'tudes spatiales), and CDTI (the Spanish government agency with responsibility for space) satellite launched on November 2, 2009 and SMAP (Soil Moisture Active Passive), a National Aeronautics and Space Administration (NASA) satellite successfully launched in January 2015. In this study, we used a multilinear regression approach to retrieve SM from SMAP data to create a global dataset of SM, which is consistent with SM data retrieved from SMOS. This was achieved by calibrating coefficients of the regression model using the CATDS (Centre Aval de Traitement des Donnes) SMOS Level 3 SM and the horizontally and vertically polarized brightness temperatures (TB) at 40 deg incidence angle, over the 2013 - 2014 period. Next, this model was applied to SMAP L3 TB data from Apr 2015 to Jul 2016. The retrieved SM from SMAP (referred to here as SMAP_Reg) was compared to: (i) the operational SMAP L3 SM (SMAP_SCA), retrieved using the baseline Single Channel retrieval Algorithm (SCA); and (ii) the operational SMOSL3 SM, derived from the multiangular inversion of the L-MEB model (L-MEB algorithm) (SMOSL3). This inter-comparison was made against in situ soil moisture measurements from more than 400 sites spread over the globe, which are used here as a reference soil moisture dataset. The in situ observations were obtained from the International Soil Moisture Network (ISMN; https:ismn.geo.tuwien.ac.at) in North of America (PBO_H2O, SCAN, SNOTEL, iRON, and USCRN), in Australia (Oznet), Africa (DAHRA), and in Europe (REMEDHUS, SMOSMANIA, FMI, and RSMN). The agreement was analyzed in terms of four classical statistical criteria: Root Mean Squared Error (RMSE),Bias, Unbiased RMSE (UnbRMSE), and correlation coefficient (R). Results of the comparison of these various products with in situ observations show that the performance of both SMAP products i.e. SMAP_SCA and SMAP_Reg is 48 similar and marginally better to that of the SMOSL3 product particularly over the PBO_H2O, SCAN, and USCRN sites. However, SMOSL3 SM was closer to the in situ observations over the DAHRA and Oznet sites. We found that the correlation between all three datasets and in situ measurements is best (R 0.80) over the Oznet sites and worst (R 0.58) over the SNOTEL sites for SMAP_SCA and over the DAHRA and SMOSMANIA sites (R 0.51 and R 0.45 for SMAP_Reg and SMOSL3, respectively). The Bias values showed that all products are generally dry, except over RSMN, DAHRA, and Oznet (and FMI for SMAP_SCA). Finally, our analysis provided interesting insights that can be useful to improve the consistency between SMAP and SMOS datasets.

SMOS↗

NASA NTRS2018

A Global Spatially Contiguous Solar-Induced Fluorescence (CSIF) Dataset Using Neural Networks

Satellite-retrieved solar-induced chlorophyll fluorescence (SIF) has shown great potential to monitor the photosynthetic activity of terrestrial ecosystems. However, several issues, including low spatial and temporal resolution of the gridded datasets and high uncertainty of the individual retrievals, limit the applications of SIF. In addition, inconsistency in measurement footprints also hinders the direct comparison between gross primary production (GPP) from eddy covariance (EC) flux towers and satellite-retrieved SIF. In this study, by training a neural network (NN) with surface reflectance from the MODerate-resolution Imaging Spectroradiometer (MODIS) and SIF from Orbiting Carbon Observatory-2 (OCO-2), we generated two global spatially contiguous SIF (CSIF) datasets at moderate spatiotemporal (0.05° 4-day) resolutions during the MODIS era, one for clear-sky conditions (2000–2017) and the other one in all-sky conditions (2000–2016). The clear-sky instantaneous CSIF (CSIF(sub clear-inst)) shows high accuracy against the clear-sky OCO-2 SIF and little bias across biome types. The all-sky daily average CSIF (CSIF(sub all-daily)) dataset exhibits strong spatial, seasonal and interannual dynamics that are consistent with daily SIF from OCO-2 and the Global Ozone Monitoring Experiment-2 (GOME-2). An increasing trend (0.39 %) of annual average CSIFall-daily is also found, confirming the greening of Earth in most regions. Since the difference between satellite-observed SIF and CSIF is mostly caused by the environmental down-regulation on SIF(sub yield), the ratio between OCO-2 SIF and CSIF(sub clear-inst) can be an effective indicator of drought stress that is more sensitive than the normalized difference vegetation index and enhanced vegetation index. By comparing CSIF(sub all-daily) with GPP estimates from 40 EC flux towers across the globe, we find a large cross-site variation (c.v. = 0.36) of the GPP–SIF relationship with the highest regression slopes for evergreen needleleaf forest. However, the cross-biome variation is relatively limited (c.v. = 0.15). These two contiguous SIF datasets and the derived GPP–SIF relationship enable a better understanding of the spatial and temporal variations of the GPP across biomes and climate.

Zhang, Yao↗

NASA NTRS2020

Evaluating China's fossil-fuel CO2 emissions from a comprehensive dataset of nine inventories

China's fossil-fuel CO2 (FFCO2) emissions accounted for approximately 28 % of the global total FFCO2 in 2016. An accurate estimate of China's FFCO2 emissions is a prerequisite for global and regional carbon budget analyses and the monitoring of carbon emission reduction efforts. However, significant uncertainties and discrepancies exist in estimations of China's FFCO2 emissions due to a lack of detailed traceable emission factors (EFs) and multiple statistical data sources. Here, we evaluated China's FFCO2 emissions from nine published global and regional emission datasets. These datasets show that the total emissions increased from 3.4 (3.0–3.7) in 2000 to 9.8 (9.2–10.4) Gt CO2 per yr in 2016. The variations in these estimates were largely due to the different EF (0.491–0.746 t C per t of coal) and activity data. The large-scale patterns of gridded emissions showed a reasonable agreement, with high emissions being concentrated in major city clusters, and the standard deviation mostly ranged from 10 % to 40 % at the provincial level. However, patterns beyond the provincial scale varied significantly, with the top 5 % of the grid level accounting for 50 %–90 % of total emissions in these datasets. Our findings highlight the significance of using locally measured EF for Chinese coal. To reduce uncertainty, we recommend using physical CO2 measurements and use these values for dataset validation, key input data sharing (e.g., point sources), and finer-resolution validations at various levels.

Pengfei Han↗

NASA NTRS2021

The Top-of-Atmosphere, Surface and Atmospheric Cloud Radiative Kernels Based on ISCCP-H Datasets: Method and Evaluation

This study aims to create observation-based cloud radiative kernel (CRK) datasets and evaluate them by direct comparison of CRK and the CRK-derived cloud feedback datasets. Based on the International Satellite Cloud Climatology Project (ISCCP) H datasets, we calculate CRKs (called ISCCP-FH or FH CRKs) as 2D joint function/histogram of cloud optical depth and cloud top pressure for shortwave (SW), longwave (LW), and their sum, Net, at the top of atmosphere (TOA), as well as, for the first time, at the surface (SFC) and in the atmosphere (ATM). With cloud fraction change (CFC) datasets from doubled-CO2 simulation and short-term observational anomalies, we derive all the TOA, SFC and ATM cloud feedback for SW, LW and Net using our CRKs.The direct comparison with modeled and observed CRKs (or cloud radiative effects), cloud feedback from previous model results and the Clouds and the Earth's Radiant Energy System products show that our CRKs and CRK-derived cloud feedback are reasonably well validated. We estimate the uncertainty for the CRK-derived cloud feedback and show that the CFC-associated uncertainty contributes >98.5% of the total cloud feedback uncertainty while CRK's is very small. Our preliminary evaluation also shows that some near-zero/small cloud feedback in the TOA-alone feedback indeed results from the compensation of sizable cloud feedback of the SFC and ATM feedback and reveals some significant surface and atmospheric cloud feedback whose sum appears insignificant in TOA-alone feedback. In addition, the atmospheric longwave cloud feedback seems to play a role in enhancing meridional atmospheric energy transport.

cloud radiative kernel↗

NASA NTRSDate not supplied

Senteniel-6 Radio Occultation Product Released by NASA GES DISC to Supplement Satellite Remote Sensing Datasets for PBL Study

The NASA Goddard Earth Sciences Data and Information Services Center (GES DISC) curates hyperspectral atmospheric sounder remote sensing and numerical model reanalysis datasets which have been utilized in the Planetary Boundary Layer (PBL) research and applications. The hyperspectral sounder remote-sensing datasets include the Atmospheric Infrared Sounder (AIRS) on the Aqua satellite to the Cross-track Infrared Sounder (CrIS) on Suomi--National Polar- orbiting Partnership (NPP) and National Oceanic and Atmospheric Administration -20 (N NOAA-20)/ Joint Polar-orbiting Satellite System -1 (JPSS-1). The Modern-Era Retrospective analysis for Research and Applications Version 2 (MERRA-2) global reanalysis product provides a data record commencing in 1980. The sounder remote sensing and reanalysis datasets include temperature, water vapor, and trace gas profile down to the PBL, and also have a derived PBL height as well. A nearly 10-year (June 2006 to December 2015) seasonal and annual PBL height climatology dataset from COSMIC Global Navigation Satellite System (GNSS) radio occultation (RO) measurement is also available from the GES DISC. In collaboration with Sentinel-6 Project, the GES DISC is implementing curation activities for GNSS RO products from the Sentinel-6A/Sentinel-6 Michael Freilich satellite launched on November 21, 2020. Sentinel-6A RO products provide refractivity, temperature, and humidity profile with finer vertical resolution, leveraging PBL research and application as a supplement to the hyperspectral sounder remote sensing and reanalysis products. The public release of Sentinel- 6A RO products is scheduled for mid-October of 2021. In this presentation, we will introduce all Senitnel-6A products and services, and demonstrate use cases studying the PBL by combining these products with other GES DISC archived data products.

Feng Ding↗

NASA NTRS2021

FLUXNET-CH4: a global, multi-ecosystem dataset and analysis of methane seasonality from freshwater wetlands

Methane (CH4) emissions from natural landscapes constitute roughly half of global CH4 contributions to the atmosphere, yet large uncertainties remain in the absolute magnitude and the seasonality of emission quantities and drivers. Eddy covariance (EC) measurements of CH4 flux are ideal for constraining ecosystem-scale CH4 emissions due to quasi-continuous and high-temporal-resolution CH4 flux measurements, coincident carbon dioxide, water, and energy flux measurements, lack of ecosystem disturbance, and increased availability of datasets over the last decade. Here, we (1) describe the newly published dataset, FLUXNET-CH4 Version 1.0, the first open-source global dataset of CH4 EC measurements (available at https://fluxnet.org/data/fluxnet-ch4-community-product/, last access: 7 April 2021). FLUXNET-CH4 includes half-hourly and daily gap-filled and non-gap-filled aggregated CH4 fluxes and meteorological data from 79 sites globally: 42 freshwater wetlands, 6 brackish and saline wetlands, 7 formerly drained ecosystems, 7 rice paddy sites, 2 lakes, and 15 uplands. Then, we (2) evaluate FLUXNET-CH4 representativeness for freshwater wetland coverage globally because the majority of sites in FLUXNET-CH4 Version 1.0 are freshwater wetlands which are a substantial source of total atmospheric CH4 emissions; and (3) we provide the first global estimates of the seasonal variability and seasonality predictors of freshwater wetland CH4 fluxes. Our representativeness analysis suggests that the freshwater wetland sites in the dataset cover global wetland bioclimatic attributes (encompassing energy, moisture, and vegetation-related parameters) in arctic, boreal, and temperate regions but only sparsely cover humid tropical regions. Seasonality metrics of wetland CH4 emissions vary considerably across latitudinal bands. In freshwater wetlands (except those between 20°S to 20°N) the spring onset of elevated CH4 emissions starts 3 d earlier, and the CH4 emission season lasts 4 d longer, for each degree Celsius increase in mean annual air temperature. On average, the spring onset of increasing CH4 emissions lags behind soil warming by 1 month, with very few sites experiencing increased CH4 emissions prior to the onset of soil warming. In contrast, roughly half of these sites experience the spring onset of rising CH4 emissions prior to the spring increase in gross primary productivity (GPP). The timing of peak summer CH4 emissions does not correlate with the timing for either peak summer temperature or peak GPP. Our results provide seasonality parameters for CH4 modeling and highlight seasonality metrics that cannot be predicted by temperature or GPP (i.e., seasonality of CH4 peak). FLUXNET-CH4 is a powerful new resource for diagnosing and understanding the role of terrestrial ecosystems and climate drivers in the global CH4 cycle, and future additions of sites in tropical ecosystems and site years of data collection will provide added value to this database. All seasonality parameters are available at https://doi.org/10.5281/zenodo.4672601 (Delwiche et al., 2021). Additionally, raw FLUXNET-CH4 data used to extract seasonality parameters can be downloaded from https://fluxnet.org/data/fluxnet-ch4-community-product/ (last access: 7 April 2021), and a complete list of the 79 individual site data DOIs is provided in Table 2 of this paper.

FLUXNET-CH4↗

NASA NTRS2021

Evaluation of Rainfall-Snowfall Separation Performance in Remote Sensing Datasets

The first step to accurately measure global snowfall is to separate rainfall from snowfall correctly (i.e., precipitation phase discrimination). This study first evaluates the phase discrimination performance in four remote sensing datasets, including observations from ground radar, spaceborne radars, and spaceborne radiometer, relative to ground observations. Results show that the snowfall discrimination accuracy varies greatly among these datasets ranging from 42% to 96%, dependent on whether and how the temperature information are considered. For example, over half of the snowfall from the Global Precipitation Measurement Mission (GPM) spaceborne radar is actually rainfall at the surface since it detects snowfall in the air without considering the temperature information close to the surface. Second, we evaluate the discrimination performance using the temperature information from four reanalysis datasets. It is found that MERRA2 temperature close to the surface is colder than the other three datasets, leading to more rainfall being misclassified as snowfall.

Yalei You↗

NASA NTRSDate not supplied

Batch Effect Correction Methods for NASA GeneLab Transcriptomic Datasets

RNA sequencing (RNA-seq) data from space biology experiments promise to yield invaluable insights into the effects of spaceflight on terrestrial biology. However, sample numbers from each study are low due to limited crew availability, hardware, and space. To increase statistical power, spaceflight RNA-seq datasets from different missions are often aggregated together. However, this can introduce technical variation or "batch effects", often due to differences in sample handling, sample processing, and sequencing platforms. Several computational methods have been developed to correct for technical batch effects, thereby reducing their impact on true biological signals. In this study, we combined 7 mouse liver RNA-seq datasets from NASA GeneLab (part of the NASA Open Science Data Repository) to evaluate several common batch effect correction methods (ComBat and ComBat-seq from the sva R package, and Median Polish, Empirical Bayes, and ANOVA from the MBatch R package). We quantitatively evaluated the ability of these methods to correct for technical batch variables in space biology RNA-seq data using the following criteria: BatchQC, principal component analysis, dispersion separability criterion, log fold change correlation, and differential gene expression analysis. Each batch variable / correction method combination was then assessed using a custom scoring approach to identify the optimal correction method for the combined dataset, by geometrically probing the space of all allowable scoring functions to yield an aggregate volume-based scoring measure. Finally, we describe the way in which the GeneLab multi-study analysis and visualization portal will allow users to examine the presence or absence of batch effects using multiple metrics. If the user chooses to perform batch effect correction, the scoring approach described here can be implemented to identify the optimal correction method to use for their specific combined dataset prior to analysis.

Lauren M. Sanders↗

NASA NTRSDate not supplied

A Knowledge Graph Framework for Organizing Heterogeneous Datasets for Utilization in Classical and Quantum Computing: Current Challenges and Future Directions

"The escalating impact of climate change induced extreme weather events in urban, suburban, and rural environments demands a rethink of how we have been using the single event-based or use-case-based knowledge graph models. The lack of representation in interaction within environmental variables found in literature led to the development of a novel framework that reflects the true nature of the interconnectedness in our environment. We propose an Environmental Interaction Knowledge Graph (EIKG) framework. This general EIKG framework works as the basis for interconnected environmental events by knitting interrelated events such as hurricanes leading to storm surges, which lead to flood events that could cause mudslides, landslides, etc., The cascading nature of one event leading to another related event in the environment requires an adequate understanding of each event using contextual information before conducting any data-driven analytics. This vision paper showcases how the EIKG:floods, EIKG:wildfire EIKG:landslides, etc, can be derived from a base case framework of EIKG as those individual events are interconnected with some common denominator variables. As an example, the precipitation variable is used in the flood case study as well as in the wildfire case study, as excessive precipitation levels lead to floods, and lack of precipitation leads to droughts and wildfires. We identify the precipitation variable as a “common-denominator-variable” in extreme weather events that play a key role in modeling the environment leading to different extreme weather events based on the variability of that variable (varying values where low precipitation leads to drought, and high values lead to floods). We use the insights gained from EIKG to conduct classical and Quantum Machine Learning (QML) based data analysis on the research questions developed. Our preliminary study shows how the Variational Quantum Classifier (VQC) and Quantum Support Vector Classifier (QSVC) are used along with the classical machine learning models to compare the model accuracies. Our study elaborates on how a quantitative analysis uses state-of-the-art machine learning techniques that include implementing both classical and quantum machine learning models and developing the knowledge graph. The EIKG is used to organize heterogeneous datasets and integrate the relations to case-specific extreme weather events such as floods. The study uses datasets such as county-to-country residential mobility data, socioeconomic datasets from the US Census Bureau, climate and weather-related Earth Observational data from NASA, and critical infrastructure data from the Homeland Infrastructure datasets."

Knowledge Graphs, Quantum Computing, Heterogenous ↗

DOE OSTI2022

VizBrick: A GUI-based Interactive Tool for Authoring Semantic Metadata for Building Datasets

Brick ontology is a unified semantic metadata schema to address the stand-ardization problem of buildings' physical, logical, and virtual assets and the relationships between them. Creating a Brick model for a building dataset means that the dataset's contents are semantically described using the standard terms defined in the Brick ontology. It will enable the benefits of data standardization, without having to recollect or reorganize the data and opens the possibility of automation leveraging the machine readability of the semantic metadata. The problem is that authoring Brick models for building datasets often requires knowledge of semantic technology (e.g., on-tology declarations and RDF syntax) and leads to repeated manual trial and error processes, which can be time-consuming and challenging to do with-out an interactive visual representation of the data. We developed VizBrick, a tool with a graphical user interface that can assist users in creating Brick models visually and interactively without having to understand the Re-source Description Framework (RDF) syntax. VizBrick provides handy ca-pabilities such as keyword search for easy find of relevant brick concepts and relations to their data columns and automatic suggestions of concept mapping. In this demonstration, we present a use-case of VizBrick to show-case how a Brick model can be created for a real-world building dataset.

Lee, Sangkeun (Matt)↗

DOE OSTI2025

The HydroBio Dataset: a new data resource for evaluating existing and potential hydropower capacity and freshwater biodiversity in the conterminous United States

Hydropower is a critical source of affordable and reliable electricity and energy system stability services in the United States. Opportunities to expand US hydropower production include retrofitting existing non-powered dams to produce power, retrofitting existing hydropower dams to improve efficiency or increase capacity, or constructing new hydropower infrastructure on currently unregulated river reaches. We created the HydroBio Dataset, which summarizes existing and potential hydropower capacity and freshwater biodiversity at the sub-basin scale in the conterminous US to contextualize existing and potential grid contributions with the freshwater ecosystems in which dams are situated. We demonstrate a use-case of this dataset by rescaling and comparing potential non-powered dam nominal capacity to rarity-threat-weighted freshwater species richness for sub-basins where both types of data exist. On average, normalized freshwater biodiversity exceeded normalized potential non-powered dam nominal capacity in these sub-basins. Potential non-powered dam nominal capacity was concentrated in sub-basins in the Upper Mississippi and Ohio hydrologic regions while freshwater biodiversity was concentrated in the South Atlantic-Gulf, Ohio, and Tennessee hydrologic regions. Additionally, non-powered dams and existing hydropower dams are located in sub-basins with similar indices of freshwater biodiversity. The HydroBio Dataset adds an additional ecological dimension of context to our understanding of current and potential future US hydropower capabilities and is a valuable decision support tool for stakeholders tasked with balancing gains in services to the US power grid with the public and environmental benefits of freshwater ecosystems.

Biodiversity↗

NASA NTRS2023

The Historical Greenland Climate Network (GC-Net) Curated and Augmented Level-1 Dataset

The Greenland Climate Network (GC-Net) consists of 31 automatic weather stations (AWSs) at 30 sites across the Greenland Ice Sheet. The first site was initiated in 1990, and the project has operated almost continuously since 1995 under the leadership of the late Konrad Steffen. The GC-Net AWS measured air temperature, relative humidity, wind speed, atmospheric pressure, downward and reflected shortwave irradiance, net radiation, and ice and firn temperatures. The majority of the GC-Net sites were located in the ice sheet accumulation area (17 AWSs), while 11 AWSs were located in the ablation area, and two sites (three AWSs) were located close to the equilibrium line altitude. Additionally, three AWSs of similar design to the GC-Net AWS were installed by Konrad Steffen's team on the Larsen C ice shelf, Antarctica. After more than 3 decades of operation, the GC-Net AWSs are being decommissioned and replaced by new AWSs operated by the Geological Survey of Denmark and Greenland (GEUS). Therefore, making a reassessment of the historical GC-Net AWS data is necessary. We present a full reprocessing of the historical GC-Net AWS dataset with increased attention to the filtering of erroneous measurements, data correction and derivation of additional variables: continuous surface height, instrument heights, surface albedo, turbulent heat fluxes, and 10 m ice and firn temperatures. This new augmented GC-Net level-1 (L1) AWS dataset is now available at https://doi.org/10.22008/FK2/VVXGUT (Steffen et al., 2023) and will continue to be refined. The processing scripts, latest data and a data user forum are available at https://github.com/GEUS-Glaciology-and-Climate/GC-Net-level-1-data-processing (last access: 30 November 2023). In addition to the AWS data, a comprehensive compilation of valuable metadata is provided: maintenance reports, yearly pictures of the stations and the station positions through time. This unique dataset provides more than 320 station years of high-quality atmospheric data and is available following FAIR (findable, accessible, interoperable, reusable) data and code practices.

Greenland Climate Network↗

DOE OSTI2020

Collaborative Exploration of Scientific Datasets Using Immersive and Statistical Visualization: Preprint

We discuss the value of collaborative, immersive visualization for the exploration of scientific datasets and review techniques and tools that have been developed and deployed at the National Renewable Energy Laboratory (NREL). We believe that collaborative visualizations linking statistical interfaces and graphics on laptops and high-performance computing (HPC) with 3D visualizations on immersive displays (head-mounted displays and large-scale immersive environments) enable scientific workflows that further rapid exploration of large, high-dimensional datasets by teams of analysts. We present a framework, PlottyVR, that blends statistical tools, general-purpose programming environments, and simulation with 3D visualizations. To contextualize this framework, we propose a categorization and loose taxonomy of collaborative visualization and analysis techniques. Finally, we describe how scientists and engineers have adopted this framework to investigate large, complex datasets.

collaborative visualization↗

DOE OSTI2021

Collaborative Exploration of Scientific Datasets Using Immersive and Statistical Visualization

collaborative visualization↗

DOE OSTI2022

OPF-Learn: An Open-Source Framework for Creating Representative AC Optimal Power Flow Datasets: Preprint

Increasing levels of renewable generation motivate a growing interest in data-driven approaches for AC optimal power flow (AC OPF) to manage uncertainty. However, a lack of disciplined dataset creation and benchmarking prohibits useful comparison between approaches in the literature. To instigate confidence, models must be able to reliably predict solutions across a wide range of operating conditions. This paper develops the OPF-Learn package for Julia and Python which uses a computationally efficient approach to create representative datasets that span a wide spectrum of the AC OPF feasible region. Load profiles are uniformly sampled from a convex set that contains the AC OPF feasible set. For each infeasible point found, the convex set is reduced using infeasibility certificates, found by utilizing properties of a relaxed formulation. The framework is shown to generate datasets which are more representative of the entire feasible space versus traditional techniques seen in the literature, improving machine learning model performance.

dataset↗

DOE OSTI2023

PNNL DataHub NIAID Program Project: Modeling Host Responses to Understand Severe Human Virus Infections, Multi-Omic Viral Dataset Catalog Collection

The National Institute of Allergy and Infectious Diseases (NIAID) "Modeling Host Responses to Understand Severe Human Virus Infections" program project was a highly integrated and comprehensive systems biology research core, funded by the National Institute of Health (U19AI106772) from 2013-06-01 to 2018-05-31, investigating the complex host response to category A, B, and C priority pathogen infections. Resulting project deliverables include an extensive comprehensive collections of linked primary and secondary transformation viral experimental infection data. Here we provide a never before released comprehensive infectious disease collection of primary and secondary transformation multi-Omics data profiling a series of priority pathogen primary experimental studies for enhanced open access to viral Omics lifecycle datasets and project metadata. Using a highly integrated and multidisciplinary approach, linked primary data and metadata supporting secondary normalization datasets, provide critical information necessary for research reproducibility and long-term preservation. Enabling on-demand data access for research community consumption and developer reuse, serves to support new mechanistic insights and discoveries into host-pathogen interactions for aiding future biohazard data preparedness efforts in emergency response to global health crises involving viral infection.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2023

A convection-permitting dynamically downscaled dataset over the Midwestern United States

Climate change is expected to have far-reaching effects at both the global and regional scale, but local effects are difficult to determine from coarse-resolution climate studies. Dynamical downscaling can provide insight into future climate projections on local scales. Here, we present a new dynamically downscaled dataset for Indiana and the surrounding regions. Output from the Community Earth System Model (CESM) version 1 is downscaled using the Weather Research and Forecasting model (WRF). Simulations are run with a 24-hr reinitialization strategy and a 12-hr spin-up window. WRF output is bias corrected to the National Centers for Environmental Protection/National Center for Atmospheric Research 40-year Reanalysis project (NCEP) using a modified quantile mapping method. Bias-corrected 2-m air temperature and accumulated precipitation are the initial focus, with additional variables planned for future releases. Regional climate change signals agree well with larger global studies, and local fine-scaled features are visible in the resulting dataset, such as urban heat islands, frontal passages, and orographic temperature gradients. This high-resolution climate dataset could be used for down-stream applications focused on impacts across the domain, such as urban planning, energy usage, water resources, agriculture and public health.

54 ENVIRONMENTAL SCIENCES↗