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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 271 records · Page 15
All sourcesNASA NTRSDOE OSTI
DOE OSTI2013

Improving experimental phases for strong reflections prior to density modification

A genetic algorithm has been developed to optimize the phases of the strongest reflections in SIR/SAD data. This is shown to facilitate density modification and model building in several test cases. Experimental phasing of diffraction data from macromolecular crystals involves deriving phase probability distributions. These distributions are often bimodal, making their weighted average, the centroid phase, improbable, so that electron-density maps computed using centroid phases are often non-interpretable. Density modification brings in information about the characteristics of electron density in protein crystals. In successful cases, this allows a choice between the modes in the phase probability distributions, and the maps can cross the borderline between non-interpretable and interpretable. Based on the suggestions by Vekhter [Vekhter (2005 ▶), Acta Cryst. D61, 899–902], the impact of identifying optimized phases for a small number of strong reflections prior to the density-modification process was investigated while using the centroid phase as a starting point for the remaining reflections. A genetic algorithm was developed that optimizes the quality of such phases using the skewness of the density map as a target function. Phases optimized in this way are then used in density modification. In most of the tests, the resulting maps were of higher quality than maps generated from the original centroid phases. In one of the test cases, the new method sufficiently improved a marginal set of experimental SAD phases to enable successful map interpretation. A computer program, SISA, has been developed to apply this method for phase improvement in macromolecular crystallography.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2025

Uncertainty Quantification Enabled by Automatic Differentiation for Hydrodynamic Simulation of Shock‐to‐Detonation Transition in High Explosives

Quantifying the effects of uncertainty in a reactive burn model on the run-to-detonation time in high explosives (HEs) provides a robust methodology for assessing the probability of an HE failing the IHE qualification standard. Moreover, uncertainty quantification helps evaluate whether the model calibration accurately represents data outside the calibration set. This study uses a specialized hydrodynamic simulation code for modeling detonation to determine the run-to-detonation time of the HE PBX 9502 for various impact velocities. To quickly approximate uncertainties in the model, a surrogate was constructed using a Taylor series expansion centered at the mean of the input parameters. To obtain the sensitivities required for constructing the Taylor series, HYP-percomplex Automatic Differentiation (HYPAD) was implemented. HYPAD is a methodology for infusing existing codes with automatic differentiation capabilities by augmenting variables with one or more imaginary units to compute step-size independent partial derivatives. These derivatives are accurate to machine precision with respect to the implemented numerical algorithm, meaning their accuracy reflects that of the underlying method (e.g., integration or discretization schemes). Using reduced order modeling techniques, the mean and standard deviation of the run-to-detonation time of a shock within PBX 9502 were computed for a number of initial impact velocities. A weighted least squares regression was then performed to obtain a best fit curve and prediction interval for the computed statistics. Historical data points from explosively driven wedge tests were utilized to validate the prediction interval, ensuring its reliability in predicting future outcomes. With this prediction interval and a known safety constraint curve, the most probable point of failure and the probability of failure for the HE PBX 9502 were determined.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2018

A comprehensive computational study of adatom diffusion on the aluminum (1 0 0) surface

The complexity of adatom diffusion on the Al (1 0 0) surface is reflected by the existence of several low-energy non-trivial atomic exchange or vacancy formation mechanisms involving concerted motion of several (3–7) atoms. Interestingly, these mechanisms have energy barriers lower than or comparable to that of the simple (and intuitive) hopping mechanism commonly observed on other surface facets. While prior studies mainly used classical potentials to understand diffusion processes active on Al (1 0 0) surface, we use accurate (and expensive) density functional theory (DFT) computations to estimate barriers associated with nine low-energy and non-trivial adatom diffusion mechanisms. We find that there exist several exchange mechanisms with energy barriers less than or equal to that of the trivial hop mechanism. Furthermore, several of the atomic exchange mechanisms have barriers within 0.2 eV of that of the simple hop, thereby highlighting mechanisms that can be relevant during surface/crystal growth. Our results paint a highly complex picture of the diffusion landscape on Al (1 0 0) and provide insights into how such mechanisms may contribute toward large length- and time-scale surface phenomena. The results presented in this work may also have implications for other fcc metals. Further, we show that some of the commonly used interatomic potentials fail to accurately capture the details of adatom diffusion on Al (1 0 0). The presented benchmark DFT dataset can thus be utilized to parameterize/retrain such potentials.

36 MATERIALS SCIENCE↗
DOE OSTI2022

Predictive Radiation Oncology – A New NCI–DOE Scientific Space and Community

With a widely attended virtual kickoff event on January 29, 2021, the National Cancer Institute (NCI) and the Department of Energy (DOE) launched a series of 4 interactive, interdisciplinary workshops—and a final concluding “World Café” on March 29, 2021—focused on advancing computational approaches for predictive oncology in the clinical and research domains of radiation oncology. These events reflect 3,870 human hours of virtual engagement with representation from 8 DOE national laboratories and the Frederick National Laboratory for Cancer Research (FNL), 4 research institutes, 5 cancer centers, 17 medical schools and teaching hospitals, 5 companies, 5 federal agencies, 3 research centers, and 27 universities. Here we summarize the workshops by first describing the background for the workshops. Participants identified twelve key questions—and collaborative parallel ideas—as the focus of work going forward to advance the field. These were then used to define short-term and longer-term “Blue Sky” goals. In addition, the group determined key success factors for predictive oncology in the context of radiation oncology, if not the future of all of medicine. These are: cross-discipline collaboration, targeted talent development, development of mechanistic mathematical and computational models and tools, and access to high-quality multiscale data that bridges mechanisms to phenotype. The workshop participants reported feeling energized and highly motivated to pursue next steps together to address the unmet needs in radiation oncology specifically and in cancer research generally and that NCI and DOE project goals align at the convergence of radiation therapy and advanced computing.

62 RADIOLOGY AND NUCLEAR MEDICINE↗
DOE OSTI2015

Impact of the differential fluence distribution of brachytherapy sources on the spectroscopic dose-rate constant

Purpose: To investigate why dose-rate constants for {sup 125}I and {sup 103}Pd seeds computed using the spectroscopic technique, Λ{sub spec}, differ from those computed with standard Monte Carlo (MC) techniques. A potential cause of these discrepancies is the spectroscopic technique’s use of approximations of the true fluence distribution leaving the source, φ{sub full}. In particular, the fluence distribution used in the spectroscopic technique, φ{sub spec}, approximates the spatial, angular, and energy distributions of φ{sub full}. This work quantified the extent to which each of these approximations affects the accuracy of Λ{sub spec}. Additionally, this study investigated how the simplified water-only model used in the spectroscopic technique impacts the accuracy of Λ{sub spec}. Methods: Dose-rate constants as described in the AAPM TG-43U1 report, Λ{sub full}, were computed with MC simulations using the full source geometry for each of 14 different {sup 125}I and 6 different {sup 103}Pd source models. In addition, the spectrum emitted along the perpendicular bisector of each source was simulated in vacuum using the full source model and used to compute Λ{sub spec}. Λ{sub spec} was compared to Λ{sub full} to verify the discrepancy reported by Rodriguez and Rogers. Using MC simulations, a phase space of the fluence leaving the encapsulation of each full source model was created. The spatial and angular distributions of φ{sub full} were extracted from the phase spaces and were qualitatively compared to those used by φ{sub spec}. Additionally, each phase space was modified to reflect one of the approximated distributions (spatial, angular, or energy) used by φ{sub spec}. The dose-rate constant resulting from using approximated distribution i, Λ{sub approx,i}, was computed using the modified phase space and compared to Λ{sub full}. For each source, this process was repeated for each approximation in order to determine which approximations used in the spectroscopic technique affect the accuracy of Λ{sub spec}. Results: For all sources studied, the angular and spatial distributions of φ{sub full} were more complex than the distributions used in φ{sub spec}. Differences between Λ{sub spec} and Λ{sub full} ranged from −0.6% to +6.4%, confirming the discrepancies found by Rodriguez and Rogers. The largest contribution to the discrepancy was the assumption of isotropic emission in φ{sub spec}, which caused differences in Λ of up to +5.3% relative to Λ{sub full}. Use of the approximated spatial and energy distributions caused smaller average discrepancies in Λ of −0.4% and +0.1%, respectively. The water-only model introduced an average discrepancy in Λ of −0.4%. Conclusions: The approximations used in φ{sub spec} caused discrepancies between Λ{sub approx,i} and Λ{sub full} of up to 7.8%. With the exception of the energy distribution, the approximations used in φ{sub spec} contributed to this discrepancy for all source models studied. To improve the accuracy of Λ{sub spec}, the spatial and angular distributions of φ{sub full} could be measured, with the measurements replacing the approximated distributions. The methodology used in this work could be used to determine the resolution that such measurements would require by computing the dose-rate constants from phase spaces modified to reflect φ{sub full} binned at different spatial and angular resolutions.

07 ISOTOPE AND RADIATION SOURCES↗
DOE OSTI2013

A multiscale modeling technique for bridging molecular dynamics with finite element method

In computational mechanics, molecular dynamics (MD) and finite element (FE) analysis are well developed and most popular on nanoscale and macroscale analysis, respectively. MD can very well simulate the atomistic behavior, but cannot simulate macroscale length and time due to computational limits. FE can very well simulate continuum mechanics (CM) problems, but has the limitation of the lack of atomistic level degrees of freedom. Multiscale modeling is an expedient methodology with a potential to connect different levels of modeling such as quantum mechanics, molecular dynamics, and continuum mechanics. This study proposes a new multiscale modeling technique to couple MD with FE. The proposed method relies on weighted average momentum principle. A wave propagation example has been used to illustrate the challenges in coupling MD with FE and to verify the proposed technique. Furthermore, 2-Dimensional problem has also been used to demonstrate how this method would translate into real world applications. -- Highlights: •A weighted averaging momentum method is introduced for bridging molecular dynamics (MD) with finite element (FE) method. •The proposed method shows excellent coupling results in 1-D and 2-D examples. •The proposed method successfully reduces the spurious wave reflection at the border of MD and FE regions. •Big advantages of the proposed method are simplicity and inexpensive computational cost of multiscale analysis.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2014

Computer usage and national energy consumption: Results from a field-metering study

The electricity consumption of miscellaneous electronic loads (MELs) in the home has grown in recent years, and is expected to continue rising. Consumer electronics, in particular, are characterized by swift technological innovation, with varying impacts on energy use. Desktop and laptop computers make up a significant share of MELs electricity consumption, but their national energy use is difficult to estimate, given uncertainties around shifting user behavior. This report analyzes usage data from 64 computers (45 desktop, 11 laptop, and 8 unknown) collected in 2012 as part of a larger field monitoring effort of 880 households in the San Francisco Bay Area, and compares our results to recent values from the literature. We find that desktop computers are used for an average of 7.3 hours per day (median = 4.2 h/d), while laptops are used for a mean 4.8 hours per day (median = 2.1 h/d). The results for laptops are likely underestimated since they can be charged in other, unmetered outlets. Average unit annual energy consumption (AEC) for desktops is estimated to be 194 kWh/yr (median = 125 kWh/yr), and for laptops 75 kWh/yr (median = 31 kWh/yr). We estimate national annual energy consumption for desktop computers to be 20 TWh. National annual energy use for laptops is estimated to be 11 TWh, markedly higher than previous estimates, likely reflective of laptops drawing more power in On mode in addition to greater market penetration. This result for laptops, however, carries relatively higher uncertainty compared to desktops. Different study methodologies and definitions, changing usage patterns, and uncertainty about how consumers use computers must be considered when interpreting our results with respect to existing analyses. Finally, as energy consumption in On mode is predominant, we outline several energy savings opportunities: improved power management (defaulting to low-power modes after periods of inactivity as well as power scaling), matching the rated power of power supplies to computing needs, and improving the efficiency of individual components.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗
DOE OSTI2016

Multiple RANS Scheme for the CFD Simulation of PWR

Though best-estimate system codes have been well established, the assumptions for the simplification of the conservation equations will be invalid when 3D effects play an important role in the object. The inner domain of PWR can create high 3D effects because of the disturbance of mixing vanes and the complex distribution of flow resistance. With the finest mesh to study the flow and heat transfer process of a nuclear reactor, a CFD simulation can give a perfect understanding of the physical processes in a whole reactor. However, more than 10 thousands of subchannels exist in a typical pressurized water reactor (PWR). These subchannels are narrow, comprising complex spacer grids and mixing vanes. The need of both the computational resources and the simulation time is great, which is not good for the simulation efficiency. However, the efficiency is critical for the CFD simulation of a PWR. It is meaningless if the simulation does not end. To improve the efficiency, one approach is to well consider the turbulence model used in a CFD simulation, because some models are complex and require great computing resources and time. On the contrary, some models are simple, but are also suitable to reflect the physical status in a PWR. Furthermore, the effects of the typical structures of PWR should also be clarified. They are closely related to the flow mechanism. The CFD simulation may be simplified by such effects. The objective of this research is to study the flow characteristics affected by the turbulence models and typical structures. The authors then design a scheme based on the regularities of the flow characteristics to improve the efficiency of the CFD simulation for PWR. By this research, we found: 1) The mixing vanes, a typical structure of a PWR, make the anisotropic eddy viscosity cannot be ignored for the region with short distance downstream of this structure; 2) Outside of this region, the RANS models, regardless of whether they are isotropic or anisotropic, can obtain similar results. To improve the simulation efficiency, a CFD scheme is designed by the hybrid application of multiple RANS models (MRANS). In this scheme, the major domain with low anisotropic viscosity uses the turbulence model which requires the least time. The difference is just little in the comparison with a simulation using the anisotropic RANS model for the whole computational domain. The MRANS scheme thus will be significant to improve the efficiency of the CFD simulation for a whole PWR.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗
DOE OSTI2016

Subcritical Copper-Reflected-α-phase Plutonium (SCRαP) Integral Experiment Design

A Subcritical Copper-Reflected α-phase Plutonium (SCRαP) integral benchmark experiment is proposed where multiplication will be approximated using correlated neutron data from a detector system consisting of {sup 3}He tubes inside polyethylene. Measurements will be performed on various subcritical experimental configurations consisting of a weapons-grade plutonium sphere surrounded by different Cu thicknesses. In addition to the proposed base experimental configurations with Cu, additional configurations are planned with the plutonium ball nested in various thicknesses of interleaved polyethylene spherical shells mixed in with the Cu shells. The polyethylene is intended to provide fast neutron moderation and reflection, resulting in additional measurements with differing multiplication, spectra, and nuclear data sensitivity. The proposed experiments will performed at the National Criticality Experiments Research Center (NCERC). NCERC is home to a 4.5-kg α-phase stainless steel clad plutonium sphere that is referred to as the BeRP (Beryllium-Reflected Plutonium) ball due to its historical use in a beryllium-reflected critical experiment. In 2014, similar subcritical measurements were performed with the BeRP ball surrounded by nickel and tungsten. The nickel-reflected measurements were documented as a benchmark evaluation which was accepted by the International Criticality Safety Benchmark Evaluation Project (ICSBEP). Similar to past measurements, the proposed work will help both identify deficiencies and quantify uncertainties in nuclear data and validate computational methods related to neutron multiplication inference for subcritical benchmark evaluations. Monte Carlo simulations were performed for the preliminary design of a subcritical Copper-Reflected - phase Plutonium (SCRP) integral benchmark experiment. Specifically, MCNP{sup R} version 6 was used to determine the k{sub eff} and associated nuclear data sensitivities for different preliminary configurations (reflector thickness, material type). The final experimental design process will include continuous-energy nuclear data sensitivity analysis. This will help assess the potential impact of this integral measurement as it relates to international efforts to continuously improve current libraries (ENDF, JEFF, JENDL etc) that still tend to over/under-estimate the measured results of integral experiments, sometimes significantly. Deficiencies in underlying nuclear data quantities such as Nubar have been shown to have an effect on inferred values from subcritical measurements as well. The proposed experiments and subsequent computational validation will help identify such deficiencies. It will also help validate new nuclear data evaluations, including one for Cu that was recently performed in the resolved region up to 100 MeV for {sup 65}Cu and {sup 63}Cu which is expected to improve Cu-related benchmark simulation performance. The final experimental design phase will also include simulation results that will incorporate the detectors that will be used for the subcritical measurements. For the benchmark portion of the measurements, the main detectors that are being considered are portable neutron multiplicity counters made up of {sup 3}He tubes embedded in polyethylene and lined with cadmium. These detectors employ a data acquisition system that produces list-mode data (correlated information where each event is listed sequentially) that can be analyzed using the Feynman variance-to-mean method. Other detector systems including SNAP (single {sup 3}He tube embedded in polyethylene), and a high-purity germanium (HPGe) detector are being considered for supplementary measurements only and are not intended to be used for the final benchmark measurements. Decoupling the supplementary detectors from the system eliminates any contribution to the total system multiplication, and greatly simplifies the final computational benchmark model. Therefore, an optimization of the portable neutron multiplicity counter placement in the benchmark measurements will be performed to ensure that there is minimal contribution to the total system multiplication. In addition, new temperature measurement techniques and hardware will be explored. (authors)

42 ENGINEERING↗
DOE OSTI2020

Extrinsic Absorption Pathways in Vanadium-Doped SiC Measured Using a Total Internal Reflection Geometry

Vanadium-doped SiC is under study for high-power photoconductive switches and is receiving increased attention as a potential material system for quantum computing, as the V can act as a quantum emitter at telecom wavelengths. Knowledge of the defect-mediated electronic transition pathways from sub-bandgap illumination in this material with low absorption and multi-photon and multi-path transition probability is important in optimizing quantum efficiency. Herein, the optical transitions of vanadium-doped SiC for two polytypes as a function of dopant concentration using a total internal reflection (TIR) geometry are examined. Furthermore, normalized quantum efficiency is reported and correlated with both dopant concentrations (V, N, B, and Al) measured by secondary ion mass spectroscopy (SIMS) and absorption measurements. Although both polytypes respond well to 532 nm light, efficiency at longer wavelengths does not correlate 1:1 with absorption coefficient and strongly depends on the polytype and net background co-dopant concentration. This has important implications for efficient excitation of both carriers for optoelectronics and for the use of V as a quantum emitter.

36 MATERIALS SCIENCE↗
DOE OSTI2012

Phase-Contrast MRI and CFD Modeling of Apparent 3He Gas Flow in Rat Pulmonary Airways

Phase-contrast (PC) magnetic resonance imaging (MRI) with hyperpolarized 3He is potentially useful for developing and testing patient-specific models of pulmonary airflow. One challenge, however, is that PC-MRI provides apparent values of local 3He velocity that not only depend on actual airflow but also on gas diffusion. This not only blurs laminar flow patterns in narrow airways but also introduces anomalous airflow structure that reflects gas-wall interactions. Here, both effects are predicted in a live rat using computational fluid dynamics (CFD), and for the first time, simulated patterns of apparent 3He gas velocity are compared with in-vivo PC-MRI. Results show (1) that correlations (R2) between measured and simulated airflow patterns increase from 0.23 to 0.79 simply by accounting for apparent 3He transport, and that (2) remaining differences are mainly due to uncertain airway segmentation and partial volume effects stemming from relatively coarse MRI resolution. Higher-fidelity testing of pulmonary airflow predictions should therefore be possible with future imaging improvements.

62 RADIOLOGY AND NUCLEAR MEDICINE↗
DOE OSTI2012

UV patternable thin film chemistry for shape and functionally versatile self-oscillating gels

We describe a new planar processing chemistry that allows the synthesis and patterning of dynamically self-actuating gels of diverse form. The chemical reaction covalently incorporates a methacrylate-modified ruthenium trisbipyridine monomer within a poly acrylamide (PAAm) gel, modified to provide a flexible chemistry for UV-curable, self-oscillating Belousov–Zhabotinsky (BZ) gels. The photoinitiated polymerization offers significant advantages over previously reported BZ gel chemistries – fast polymerization rates, broad flexibility in the structural and functional attributes that impact the BZ reaction driven mechanics, and a facility for net shape fabrication via projection mode photo lithographic exposure. The facility of the synthetic method enabled an opportunity to broadly explore the structure/property and structure/rate correlations characterizing the dynamics of these gels and develop means to both control and predict the detailed features of the self-oscillating chemical waves they embed. The PAAm systems initiate under the control of transport-dominated influences weighted heavily by the diffusion/depletion of reagents present in the ambient contacting fluid medium. These initiating modes of oscillation are generally unstable temporally, showing shape- and property-sensitive conversions to oscillating modes controlled by the attributes of the gel-phase environment. The present work establishes the nature of these sensitivities, developing insights related to such features in patterned gel objects or films as composition, size, thickness, shape, degree of crosslinking, and gradient forms of structure within the gel. We observed in this work that, across a broad design-rule and compositional space, the PAAm based BZ gel systems exhibit contractions in dimension for regions in which the Ru catalyst is present in the +3 oxidation state (PNIPAAm BZ gels expand in this state). The chemomechanics of the PAAm system are further differentiated from those of PNIPAAm in the generally (and relatively) fast oscillatory rates it can sustain. Furthermore, this work suggests the dynamics in the PAAm gels do not reflect a simple osmotic force driven by differences in the solvation of Ru(II/III) centers. Computational modeling supports a mechanism in which the charge state of Ru centers mediate a differential degree of intra/inter-chain segmental interactions – dynamics that mediate a temporally varying degree of reversibly formed association crosslinks within the gel.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2021

An adaptive masking method for beam halo measurement by a digital micro mirror device

We report that in high intensity particle beams, irregularities in cathode emission, scattering effects, dark current and space charge forces can lead to a common phenomenon termed beam halo with associated emittance growth, beam loss and overall beam quality degradation. It is of fundamental interest and practical importance to precisely monitor such beam halo, which could offer valuable insights into the experimental strategy for the suppression of this undesired feature. A Digital Micro mirror Device (DMD) is a computer-controlled micro-electrical-mechanical system that contains a compact array of physically independent reflective mirrors. Using a standard DMD, we come up with an adaptive masking method for halo measurement, which demonstrates superior robustness and efficiency comparing to the conventional approaches as confirmed by simulation and experimental results. Our development includes an integrated package of hardware, software and a graphic user interface (GUI) that is robust and portable and can be applied as a beam halo diagnostic for electron guns or radiating charged particle beams in general.

43 PARTICLE ACCELERATORS↗
DOE OSTI2023

Mapping nanocrystal orientations via scanning Laue diffraction microscopy for multi-peak Bragg coherent diffraction imaging

The recent commissioning of a movable monochromator at the 34-ID-C endstation of the Advanced Photon Source has vastly simplified the collection of Bragg coherent diffraction imaging (BCDI) data from multiple Bragg peaks of sub-micrometre scale samples. Laue patterns arising from the scattering of a polychromatic beam by arbitrarily oriented nanocrystals permit their crystal orientations to be computed, which are then used for locating and collecting several non-co-linear Bragg reflections. The volumetric six-component strain tensor is then constructed by combining the projected displacement fields that are imaged using each of the measured reflections via iterative phase retrieval algorithms. Complications arise when the sample is heterogeneous in composition and/or when multiple grains of a given lattice structure are simultaneously illuminated by the polychromatic beam. Here, a workflow is established for orienting and mapping nanocrystals on a substrate of a different material using scanning Laue diffraction microscopy. The capabilities of the developed algorithms and procedures with both synthetic and experimental data are demonstrated. The robustness is verified by comparing experimental texture maps obtained with Laue diffraction microscopy at the beamline with maps obtained from electron back-scattering diffraction measurements on the same patch of gold nanocrystals. Such tools provide reliable indexing for both isolated and densely distributed nanocrystals, which are challenging to image in three dimensions with other techniques.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
DOE OSTI2026

Practical Three-Dimensional Curvilinear Aperture Monopulse Synthetic Aperture Radar

When collected over a curved path, Synthetic Aperture Radar (SAR) contains information about the three-dimensional content of a scene that can aid interpretation of this difficult imaging modality. In a point scatterer simulation with amplitudes and heights derived from a real SAR image pair, we supplement confocal processing with a monopulse-based algorithm to compute heights of certain bright points, which we find automatically. In SAR, bright points often reflect man-made infrastructure central to scene interpretation.

Story, Mark [ORNL] (ORCID:0000000289148911)↗
DOE OSTI2018

Correction of Fluorescent Images of Biological Tissues for the Effects of Light Absorption and Scattering

A method for correcting the influence of light attenuation processes in biological tissues on their fluorescent images is proposed. The transfer function that takes into account the radiation losses in the medium at the wavelengths of excitation and emission of fluorescence is calculated analytically, depending on the transport scattering index and the hemoglobin tissue index. The latter is determined on the basis of a color image of the tissue in reflected visible light. Verification of the developed method was carried out on the basis of computer simulation of fluorescent images of biological tissue by the Monte Carlo method.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2026

Fortran mimetic abstraction language (Formal) v0.1.

The Fortran mimetic abstraction language ("Formal") is a domain-specific language (DSL) embedded in Fortran 202Y [1]. Formal provides novel software abstractions for simulating phenomena governed by the partial differential equations (PDEs) of vector and tensor calculus. Such equations model an extremely broad set of physical phenomena, ranging from atmospheric winds to light propagation. Formal's data structures and algorithms mimic in form and behavior continuous functions and operators. Formal supports these mathematical constructs using mimetic discretizations that define a discrete calculus satisfying various tensor calculus theorems, thereby ensuring high-fidelity representations of the physics being modeled. [2] Formal 0.1.0 also lays a foundation for the future use of Fortran 202Y type-safe templates to facilitate the formal verification of tensor contractions in computational physics and artificial intelligence [3]. [1] "Fortran 202Y" is Fortran standard committee's informal designation for the next Fortran revision, which will likely be "Fortran 2028". [2] Corbino, J. and Castillo, J. (2020) Journal of Computational and Applied Mathematics, https://doi.org/10.1016/j.cam.2019.06.042. [3] Haveraaen, M., Järvi, J., & Rouson, D. (2019). Reflecting on Generics for Fortran. https://j3-fortran.org/doc/year/19/19-188.pdf.

Rouson, Damian [Lawrence Berkeley National Laborat↗
DOE OSTI2021

Free fermion entanglement with a semitransparent interface: the effect of graybody factors on entanglement islands

We study the entanglement entropy of free fermions in 2d in the presence of a partially transmitting interface that splits Minkowski space into two half-spaces. We focus on the case of a single interval that straddles the defect, and compute its entanglement entropy in three limits: Perturbing away from the fully transmitting and fully reflecting cases, and perturbing in the amount of asymmetry of the interval about the defect. Using these results within the setup of the Poincaré patch of AdS _2 2 statically coupled to a zero temperature flat space bath, we calculate the effect of a partially transmitting AdS _2 2 boundary on the location of the entanglement island region. The partially transmitting boundary is a toy model for black hole graybody factors. Our results indicate that the entanglement island region behaves in a monotonic fashion as a function of the transmission/reflection coefficient at the interface.

Kruthoff, Jorrit↗