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At least 271 records · Page 15

MODIS Collection 6 MAIAC Algorithm

This paper describes the latest version of the algorithm MAIAC (Multi-Angle Implementation of Atmospheric Correction) used for processing the MODIS (Moderate-resolution Imaging Spectroradiometer) Collection6 data record. Since initial publication in 2011-2012, MAIAC has changed considerably to adapt to global processing and improve cloud/snow detection, aerosol retrievals and atmospheric correction of MODIS data. The main changes include (1) transition from a 25 to 1 km scale for retrieval of the spectral regression coefficient (SRC) which helped to remove occasional blockiness at 25 km scale in the aerosol optical depth (AOD) and in the surface reflectance, (2) continuous improvements of cloud detection, (3) introduction of smoke and dust tests to discriminate absorbing fine- and coarse mode aerosols, (4) adding over-water processing, (5) general optimization of the LUT (LookUp-Table)-based radiative transfer for the global processing, and others. MAIAC provides an interdisciplinary suite of atmospheric and land products, including cloud mask (CM), column water vapor (CWV), AOD at 0.47 and 0.55 m, aerosol type (background, smoke or dust) and fine-mode fraction over water; spectral bidirectional reflectance factors (BRF), parameters of Ross-thick Lisparse (RTLS) bidirectional reflectance distribution function (BRDF) model and instantaneous albedo. For snow-covered surfaces, we provide subpixel snow fraction and snow grain size. All products come in standard HDF4 (software library) format at 1 km resolution, except for BRF, which is also provided at 500 m resolution on a sinusoidal grid adopted by the MODIS Land team. All products are provided on per-observation basis in daily files except for the BRDF/Albedo product, which is reported every 8 days. Because MAIAC uses a time series approach, BRDF/Albedo is naturally gap-filled over land where missing values are filled-in with results from the previous retrieval. While the BRDF model is reported for MODIS Land bands 1-7 and ocean band 8, BRF is reported for both land and ocean bands 1-12. This paper focuses on MAIAC cloud detection, aerosol retrievals and atmospheric correction and describes MCD19 data products and quality assurance (QA) flags.

MAIAC Algorithm↗

Tuning the Performance of a Computational Persistent Homology Package

In recent years, persistent homology has become an attractive method for data analysis. It captures topological features, such as connected components, holes, and voids from point cloud data and summarizes the way in which these features appear and disappear in a filtration sequence. In this project, we focus on improving the performanceof Eirene, a computational package for persistent homology. Eirene is a 5000-line open-source software library implemented in the dynamic programming language Julia. We use the Julia profiling tools to identify performance bottlenecks and develop novel methods to manage them, including the parallelization of some time-consuming functions on multicore/manycore hardware. Empirical results show that performance can be greatly improved.

Persistent Homology↗

A GNSS Receiver for Small-Sats Enabling Precision POD, Radio Occultations and Reflections

A low cost, low power, and low mass GNSS receiver (called Cion) has been developed and is currently flying on the CICERO cubesats. The receiver was designed in less than a year by JPL for Tyvak and GeoOptics for use in the GeoOptics CICERO constellation and leverages 25 years of JPL GNSS reciever design experience. Cion uses a commercial off-the-shelf (COTS) computer along with existing space qualified RF down-converters, software, and firmware to produce atmospheric Radio Occultation (RO) data. By combining a FPGA with dual core ARM processor and an embedded system controller, the Xilinx Zynq processor is an enabling technology that provides a customizable digital signal processing platform integrated into the computer (System on a chip) and enables off-the-shelf hardware to become the main engine behind this software defined radio. Using Linux for the on-board computer allows for fast development times and liberal use of existing open source software libraries. The parts of the receiver that require realtime implementation are performed in the Field Programmable Gate Array (FPGA), which can also be reprogrammed in flight. While the Zynq is not rad hard, the silicon on insulator (SOI) technology is rad tolerant ‘by accident’, allowing for its use in many space-based applications. Early results show that the Cion is working as designed, has demonstrated the first known GLONASS occultations, and obtains high quality atmospheric profiles with excellent lower troposphere penetration (near Earth’s surface).

Young, Larry↗

Orion Backup Flight Software

Orion Backup Flight Software (BFS) is a joint NASA/Lockheed Martin effort designed to prevent the loss of the Orion crew. BFS will only take over in the event the primary flight software (PFSW) fails to operate properly due to either hardware or software failures. Since the PFSW runs identical software on identical hardware, it is conceivable that a single issue could simultaneously bring down all the PFSW. To minimize the likelihood BFS would be affected by the same issue, BFS was specifically designed to be as different as possible from PFSW: BFS runs on different hardware, a separate operating system, a different compiler, does not share software libraries, and is written by a different team of programmers. This presentation will provide a high-level overview of the Artemis missions and the Orion vehicle, as well as provide additional details of the BFS system (including how BFS is different than the PFSW). The overall BFS capability evolution and timeline (milestones reached as well as work remaining) through the Artemis III mission will be discussed. Additionally, the verification and validation plans for BFS will be presented, describing how we ensure that only validated configuration data is loaded onto the flight vehicle. Finally, the presentation will close with lessons learned and future plans for Orion BFS.

Orion↗

Orion Backup Flight Software (BFS)

Orion Backup Flight Software (BFS) is a joint NASA/Lockheed Martin effort designed to prevent the loss of the Orion crew. BFS will only take over in the event the primary flight software (PFSW) fails to operate properly due to either hardware or software failures. Since the PFSW runs identical software on identical hardware, it is conceivable that a single issue could simultaneously bring down all the PFSW. To minimize the likelihood BFS would be affected by the same issue, BFS was specifically designed to be as different as possible from PFSW: BFS runs on different hardware, a separate operating system, a different compiler, does not share software libraries, and is written by a different team of programmers. This presentation will provide a high-level overview of the Artemis missions and the Orion vehicle, as well as provide additional details of the BFS system (including how BFS is different than the PFSW). The overall BFS capability evolution and timeline (milestones reached as well as work remaining) through the Artemis III mission will be discussed. Additionally, the verification and validation plans for BFS will be presented, describing how we ensure that only validated configuration data is loaded onto the flight vehicle. Finally, the presentation will close with lessons learned and future plans for Orion BFS.

CFS↗

Automating Surface Attitude Positioning and Pointing Operations for Mars 2020

The Surface Attitude Positioning and Pointing (SAPP) subsystem of the Mars Perseverance rover keeps track of the rover’s position and attitude on the surface of Mars. The SAPP Downlink Engineering Operations team members receive data from the rover on a daily basis. They must interpret the data to make sure the rover is staying safe and to support uplink planning. The SAPP team keeps track of the error growth in the rover’s attitude estimate due to noise in the Rover Inertial Measurement Unit’s (RIMU) gyroscopes used to propagate that attitude estimate whenever the rover is moving. Whenever this error grows to a particular threshold, SAPP is responsible for updating the onboard attitude knowledge using the RIMU’s accelerometers to estimate rover roll and pitch and sun imaging to estimate rover yaw, thereby reducing this attitude estimation error. Accurate attitude estimation is required so that the rover can successfully point its High Gain Antenna (HGA) to receive information from Earth and as a backup to the Mars orbiters used for sending data from the rover to Earth, point instruments on its Remote Sensing Mast (RSM), and support safe movement and placement of instruments by the rover’s ARM relative to the Martian surface. The Mars 2020 Engineering Operations team has been working to increase the operational efficiency of the mission and eventually move to a five-hour timeline for daily operations. In pursuit of this goal, the SAPP Engineering Operations team has automated their downlink process by developing a centralized Jupyter notebook to analyze the data received daily from the rover. The SAPP downlink Jupyter notebook automatically collects the data relevant to the SAPP subsystem and visualizes this information in plots and tables that can be easily read by downlink operators to aid them in assessing the status of the subsystem. Various Application Programming Interfaces (APIs) have been incorporated into the downlink daily notebook to automate the collection and posting of data, such as gathering and posting data products to the cloud. The SAPP team has also developed a SAPP downlink software library that includes functions to aid the notebook in processing data. In addition to assessing the SAPP subsystem on a daily basis, operators need to assess the long-term trending behavior of the subsystem over time. An automated trending process has been developed to collect information from the daily notebooks in order to plot and analyze that data in a centralized place. These daily and trending processes have expedited the SAPP downlink assessment and laid the groundwork to completely automate the SAPP downlink process so that SAPP operators are unnecessary unless something unexpected occurs. This paper will provide an overview of the functions that the SAPP subsystem carries out on a daily basis, and will then dive into the automations that have been developed for daily and trending downlink assessment. An assessment of the downlink efficiency will be provided, along with a summary of lessons learned and work to go. Finally, the authors will discuss how these types of automated spacecraft health assessments could be more broadly used within mission operations.

Zarifian, Anais↗

Safe and Precise Landing Integrated Capabilities Evolution (SPLICE)

NASA needs for entry, descent, and landing call for improved Precision Landing and Hazard Avoidance (PL&HA) technologies. SPLICE continues to develop, mature, demonstrate, and infuse these technologies as a portfolio. SPLICE will achieve TRL 5 on a hazard detection lidar mapping sensor and TRL 6 on two key flight software libraries for advanced guidance and hazard detection. A High-Performance Space Computing surrogate multiprocessor (ARM A53) integrates sensors and FSW. This portfolio of technologies may be infused separately or fully integrated.

Guidance Navigation and Control↗

MASSIVE HYBRID PARALLELISM FOR FULLY IMPLICIT MULTIPHYSICS

As hardware advances continue to modify the supercomputing landscape, traditional scientific software development practices will become more outdated, ineffective, and inefficient. The process of rewriting/retooling existing software for new architectures is a Sisyphean task, and results in substantial hours of development time, effort, and money. Software libraries which provide an abstraction of the resources provided by such architectures are therefore essential if the computational engineering and science communities are to continue to flourish in this modern computing environment. The Multiphysics Object Oriented Simulation Environment (MOOSE) framework enables complex multiphysics analysis tools to be built rapidly by scientists, engineers, and domain specialists, while also allowing them to both take advantage of current HPC architectures, and efficiently prepare for future supercomputer designs. MOOSE employs a hybrid shared-memory and distributed-memory parallel model and provides a complete and consistent interface for creating multiphysics analysis tools. In this paper, a brief discussion of the mathematical algorithms underlying the framework and the internal object-oriented hybrid parallel design are given. Representative massively parallel results from several applications areas are presented, and a brief discussion of future areas of research for the framework are provided.

97 MATHEMATICS AND COMPUTING↗

Reproducibility responsibilities in the HPC arena

Expecting bit-for-bit reproducibility in the HPC arena is not feasible because of the ever changing hardware and software. No user s application is an island; it lives in an HPC eco-system that changes over time. Old hardware stops working and even old software won t run on new hardware. Further, software libraries change over time either by changing the internals or even interfaces. So bit-for-bit reproducibility should not be expected. Rather a reasonable expectation is that results are reproducible within error bounds; or that the answers are close (which is its own debate.) To expect a researcher to reproduce their own results or the results of others within some error bounds, there must be enough information to recreate all the details of the experiment. This requires complete documentation of all phases of the researcher s workflow; from code to versioning to programming and runtime environments to publishing of data. This argument is the core statement of the Yale 2009 Declaration on Reproducible Research [1]. Although the HPC ecosystem is often outside the researchers control, the application code could be built almost identically and there is a chance for very similar results with just only round-off error differences. To achieve complete documentation at every step, the researcher, the computing center, and the funding agencies all have a role. In this thesis, the role of the researcher is expanded upon as compared to the Yale report and the role of the computing centers is described.

Fahey, Mark R↗

ACCELERATING FUSION REACTOR NEUTRONICS MODELING BY AUTOMATIC COUPLING OF HYBRID MONTE CARLO/DETERMINISTIC TRANSPORT ON CAD GEOMETRY

Detailed radiation transport calculations are necessary for many aspects of the design of fusion energy systems (FES) such as ensuring occupational safety, assessing the activation of system components for waste disposal, and maintaining cryogenic temperatures within superconducting magnets. Hybrid Monte Carlo (MC)/deterministic techniques are necessary for this analysis because FES are large, heavily shielded, and contain streaming paths that can only be resolved with MC. The tremendous complexity of FES necessitates the use of CAD geometry for design and analysis. Previous ITER analysis has required the translation of CAD geometry to MCNP5 form in order to use the AutomateD VAriaNce reducTion Generator (ADVANTG) for hybrid MC/deterministic transport. In this work, ADVANTG was modified to support CAD geometry, allowing hybrid (MC)/deterministic transport to be done automatically and eliminating the need for this translation step. This was done by adding a new ray tracing routine to ADVANTG for CAD geometries using the Direct Accelerated Geometry Monte Carlo (DAGMC) software library. This new capability is demonstrated with a prompt dose rate calculation for an ITER computational benchmark problem using both the Consistent Adjoint Driven Importance Sampling (CADIS) method an the Forward Weighted (FW)-CADIS method. The variance reduction parameters produced by ADVANTG are shown to be the same using CAD geometry and standard MCNP5 geometry. Significant speedups were observed for both neutrons (as high as a factor of 7.1) and photons (as high as a factor of 59.6).

Biondo, Elliott D↗

UQ Toolkit v 2.0

The Uncertainty Quantification (UQ) Toolkit is a software library for the characterizaton and propagation of uncertainties in computational models. For the characterization of uncertainties, Bayesian inference tools are provided to infer uncertain model parameters, as well as Bayesian compressive sensing methods for discovering sparse representations of high-dimensional input-output response surfaces, and also Karhunen-Loève expansions for representing stochastic processes. Uncertain parameters are treated as random variables and represented with Polynomial Chaos expansions (PCEs). The library implements several spectral basis function types (e.g. Hermite basis functions in terms of Gaussian random variables or Legendre basis functions in terms of uniform random variables) that can be used to represent random variables with PCEs. For propagation of uncertainty, tools are provided to propagate PCEs that describe the input uncertainty through the computational model using either intrusive methods (Galerkin projection of equations onto basis functions) or non-intrusive methods (perform deterministic operation at sampled values of the random values and project the obtained results onto basis functions).

Source record↗

Physics Integration KErnels (PIKE)

Pike is a software library for coupling and solving multiphysics applications. It provides basic interfaces and utilities for performing code-to-code coupling. It provides simple "black-box" Picard iteration methods for solving the coupled system of equations including Jacobi and Gauss-Seidel solvers. Pike was developed originally to couple neutronics and thermal fluids codes to simulate a light water nuclear reactor for the Consortium for Simulation of Light-water Reactors (CASL) DOE Energy Innovation Hub. The Pike library contains no physics and just provides interfaces and utilities for coupling codes. It will be released open source under a BSD license as part of the Trilinos solver framework (trilinos.org) which is also BSD. This code provides capabilities similar to other open source multiphysics coupling libraries such as LIME, AMP, and MOOSE.

Pawlowski, Roger↗

Albany v. 3.0

The Albany code is a general-purpose finite element code for solving partial differential equations (PDEs). Albany is a research code that demonstrates how a PDE code can be built by interfacing many of the open-source software libraries that are released under Sandia's Trilinos project. Part of the mission of Albany is to be a testbed for new Trilinos libraries, to refine their methods, usability, and interfaces. Albany includes hooks to optimization and uncertainty quantification algorithms, including those in Trilinos as well as those in the Dakota toolkit. Because of this, Albany is a desirable starting point for new code development efforts that wish to make heavy use of Trilinos. Albany is both a framework and the host for specific finite element applications. These applications have project names, and can be controlled by configuration option when the code is compiled, but are all developed and released as part of the single Albany code base, These include LCM, QCAD, FELIX, Aeras, and ATO applications.

Salinger, Andrew↗

Stride Search v. 1.0

Stride Search provides a flexible tool for detecting storms or other extreme climate events in high-resolution climate data sets saved on uniform latitude-longitude grids in standard NetCDF format. Users provide the software a quantitative description of a meteorological event they are interested in; the software searches a data set for locations in space and time that meet the user’s description. In its first stage, Stride Search performs a spatial search of the data set at each timestep by dividing a search domain into circular sectors of constant geodesic radius. Data from a netCDF file is read into memory for each circular search sector. If the data meet or exceed a set of storm identification criteria (defined by the user), a storm is recorded to a linked list. Finally, the linked list is examined and duplicate detections of the same storm are removed and the results are written to an output file. The first stage’s output file is read by a second program that builds storm. Additional identification criteria may be applied at this stage to further classify storms. Storm tracks are the software’s ultimate output and routines are provided for formatting that output for various external software libraries for plotting and tabulating data.

Bosler, Peter↗

Scalable Out-of-Core Solvers on Xeon Phi Cluster

This paper documents the implementation of a distributive out-of-core (OOC) solver for performing LU and Cholesky factorizations of a large dense matrix on clusters of many-core programmable co-processors. The out-of- core algorithm combines both the left-looking and right-looking schemes aimed to minimize the movement of data between the CPU host and the co-processor, optimizing data locality as well as computing throughput. The OOC solver is built to align with the format of the ScaLAPACK software library, making it readily portable to any existing codes using ScaLAPACK. A runtime analysis conducted on Beacon (an Intel Xeon plus Intel Xeon Phi cluster which composed of 48 nodes of multi-core CPU and MIC) at the Na- tional Institute for Computational Sciences is presented. Comparison of the performance on the Intel Xeon Phi and GPU clusters are also provided.

D'Azevedo, Ed F↗

Progress Version 1.0

Software library for parallel rapid order N and graph-based recursive electronic structure solvers with applications to material science, chemistry, and molecular biology.

Niklasson, Anders M.↗

UQ Toolkit v. 3.0

The Uncertainty Quantification (UQ) Toolkit is a software library for the characterization and propagation of uncertainties in computational models. This library provides Bayesian inference tools to infer uncertain model parameters, Bayesian compressive sensing methods for discovering sparse representations of high-dimensional input-output response surfaces, methods for constructing Karhunen-Loève representations of stochastic processes, and global sensitivity analysis tools used to compute Sobol indices in order to characterize the importance of uncertain inputs or the interactions between them. The basis for many of these methods relies on representing random variables with Polynomial Chaos expansions (PCEs). This library implements several spectral basis function types (e.g. Hermite basis functions in terms of Gaussian random variables or Legendre basis functions in terms of uniform random variables) that can be used to represent random variables with PCEs. For the propagation of uncertainty, tools are provided to propagate PCEs that describe the input uncertainty through the computational model using either intrusive methods (Galerkin projection of equations onto basis functions) or non-intrusive methods (perform deterministic operation at sampled values of the random values and project the obtained results onto basis functions).

Sargsyan, Khachik↗

ForQint

ForQint is a Fortran software library to adaptively integrate multivariable functions versus well known probability distributions (e.g. normal, lognormal, etc.) using quadrature rules. Such integration is known to be more efficient and accurate especially when the function evaluation is expensive. The library also FQint enables the creation of both full and sparse anisotropic multi-dimensional quadrature rules. These latter encompass different such as Gauss-Hermite, Gauss-Legendre, etc. The functions Maher Salloum, Bert Debusschere, Kenny Chowdhary and subroutines rely on the C++ Stokhos package of Trilinos (trilinos.sandia.gov) where the appropriate classes were wrapped into Fortran.

Source record↗