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At least 271 records · Page 15
All sourcesNASA NTRSDOE OSTI
NASA NTRS2019

Snow Depth Variability in the Northern Hemisphere Mountains Observed from Space

Accurate snow depth observations are critical to assess water resources. More than a billion people rely on water from snow, most of which originates in the Northern Hemisphere mountain ranges. Yet, remote sensing observations of mountain snow depth are still lacking at the large scale. Here, we show the ability of Sentinel-1 to map the snow depth in the Northern Hemisphere mountains at 1 km² resolution using an empirical change detection approach. An evaluation with measurements from ~4,000 sites and reanalysis data demonstrates that the Sentinel-1 retrievals capture the spatial variability between and within mountain ranges, as well as their inter-annual differences. This is showcased with the contrasting snow depths between 2017 and 2018 in the US Sierra Nevada and European Alps. With Sentinel-1 continuity ensured until 2030 and likely beyond, these findings lay a foundation for quantifying the long-term vulnerability of mountain snow-water resources to climate change.

Hans Lievens↗
NASA NTRS2020

Fusion Approach for Remotely-Sensed Mapping of Agriculture (FARMA): A Scalable Open Source Method for Land Cover Monitoring Using Data Fusion

The increasing availability of very-high resolution (VHR; <2 m) imagery has the potential to enable agricultural monitoring at increased resolution and cadence, particularly when used in combination with widely available moderate-resolution imagery. However, scaling limitations exist at the regional level due to big data volumes and processing constraints. Here, we demonstrate the Fusion Approach for Remotely-Sensed Mapping of Agriculture (FARMA), using a suite of open source software capable of efficiently characterizing time-series field-scale statistics across large geographical areas at VHR resolution. We provide distinct implementation examples in Vietnam and Senegal to demonstrate the approach using WorldView VHR optical, Sentinel-1 Synthetic Aperture Radar, and Sentinel-2 and Sentinel-3 optical imagery. This distributed software is open source and entirely scalable, enabling large area mapping even with modest computing power. FARMA provides the ability to extract and monitor sub-hectare fields with multisensor raster signals, which previously could only be achieved at scale with large computational resources. Implementing FARMA could enhance predictive yield models by delineating boundaries and tracking productivity of smallholder fields, enabling more precise food security observations in low and lower-middle income countries.

fusion↗
NASA NTRS2021

Southwest Water Resources: Monitoring Surface Water Extents of Remote Stock Ponds in the Southwestern United States Using Earth Observing Systems for Enhanced Water Resources Management

Due to increasingly frequent and severe drought conditions in the southwestern US, land managers and livestock producers need to monitor stock ponds with increasing regularity. The ability to assess stock pond water levels with Earth observing satellite systems would enhance monitoring efforts of partners at the US Forest Service, Arizona Department of Game and Fish, and the Diablo Trust. This study employed Landsat 8 Operational Land Imager (OLI), Sentinel-1 C-band Synthetic Aperture Radar (C-SAR), and Sentinel-2 Multispectral Instrument (MSI) to monitor surface water extent for hundreds of critical stock ponds in Arizona. Using methods adapted from previously developed image processing workflows, this project conducted a time-series analysis to capture seasonal and interannual variations in surface water area between 2013 to 2021. In addition, end users can monitor the surface water extent of stock ponds through the developed Google Earth Engine software tool called Surface Water Identification and Forecasting Tool (SWIFT). SWIFT incorporates the Automated Water Extraction Index, Modified Normalized Difference Water Index, and Tasseled Cap-Wetness Index for optical imagery and the incidence angle, VV and VH polarization bands for Sentinel-1 imagery to detect small water bodies in the study area with an overall accuracy range of 88-93%. These tools will empower our partners to monitor the extents of water in their stock ponds remotely, enabling them to develop data-informed and sustainable management solutions for decades to come.

Rainey Aberle↗
NASA NTRS2021

Estimation of Snow Mass Information via Assimilation of C-Band Synthetic Aperture Radar Backscatter Observations Into an Advanced and Surface Model

This study assimilated Sentinel-1 C-band backscatter observations over snow-covered terrain into the Noah-Multiparameterization land surface model using support vector machine (SVM) regression and an ensemble Kalman filter to improve the modeled terrestrial snow mass estimates. The data assimilation (DA) experiment was conducted across Western Colorado from September 2016 to August 2017. As part of the DA experiments, the impact of a rule-based update was evaluated by comparing snow water equivalent (SWE) estimates via DA (with [ DAv1 ] and without [ DAv2 ] the rule-based update) against SNOTEL SWE measurements. Results confirmed that rule-based update helped minimize SVM controllability issues, and in turn, improved the accuracy of SWE estimates relative to both open loop (OL) and DAv2 . Comparison of SWE estimates from Sentinel-1 DAv1 against SNOTEL SWE revealed that 75% of stations showed improvements in bias and correlation coefficient relative to the OL. Assimilated SWE estimates also showed statistical improvements during both the snow accumulation and snow ablation periods. However, unbiased root mean square error showed a slight increase during the snow ablation period due to the large variability in the electromagnetic response of C-band backscatter over deep and/or wet snow. Improvement of the SWE estimates also resulted in improving river discharge estimates compared to in situ measurements. River discharge using Sentinel-1 DAv1 improved the Nash–Sutcliffe efficiency at all available stations. These results suggest that physically constrained SVM can serve as an efficient observation operator for snow mass DA through explicit consideration of the first-order C-band scattering mechanisms over different terrestrial snow conditions.

Jongmin Park↗
NASA NTRS2022

Lake Champlain Water Resources: Using Earth Observations to Identify Spatial and Seasonal Trends of Harmful Algal Events in Lake Champlain

Lake Champlain provides clean drinking water for 35% of the surrounding watershed and offers recreational opportunities to millions of tourists. However, current levels of cyanobacteria and phosphorus created breeding grounds for harmful algal blooms (HABs). The excess of phosphorus runoff into Lake Champlain over the past decade encouraged toxic cyanobacterial formations, thereby increasing the severity of HABs towards local economy and ecology. In partnership with the Natural Resources Conservation Service (NRCS) Northeast Region, this project utilized Earth observations to identify risk factors associated with toxic algal blooms. The team detected historic algal bloom trends with Sentinel-2 Multispectral Instrument (MSI), Sentinel-3 Ocean and Land Color Instrument (OLCI), Landsat 8 Operational Land Imager (OLI) and Landsat 9 OLI-2. The team also used Sentinel-3 OLCI and the German Aerospace Center’s Earth Sensing Imagery Spectrometer (DESIS) to visualize algal bloom patterns and Landsat 8 OLI, Landsat 9 OLI-2, and Shuttle Radar Topography Mission (SRTM) to identify phosphorus sources within the watershed. The team’s analyses indicated an increase in cyanobacteria blooms during summer months from 2016-2022, with Missisquoi and St. Albans Bay exhibiting the greatest concentrations of toxic events. Furthermore, 16% of the watershed was identified as posing an immediate threat to the lake’s hydrology. The area of greatest concern was the Missisquoi Bay sub-watershed, with 229,044 acres of land prone to excessive phosphorus runoff. Providing this information to the NRCS Northeast Region enabled the organization to quantify risk factors associated with algal blooms and modify mitigation efforts to better target future bloom events.

Brianne Kendall↗
NASA NTRSDate not supplied

Flood Detection with Synthetic Aperture Radar: A Case Study of Houston, Texas Following Hurricane Harvey (2017) using C- and X-Band Observations

Hurricane Harvey produced record-breaking rainfall of up to 60 inches resulting in extensive flooding in Houston, Texas, in late August and early September of 2017. The slow forward motion of the storm following landfall left much of the area unobservable to optical remote sensing instruments for several days due to cloud cover. The active nature of Synthetic Aperture Radar (SAR) instruments allows for observations through clouds, which can supplement efforts to estimate hurricane-induced flood impacts. A growing fleet of SAR constellations has helped lower the latency of imagery following a hurricane, allowing for more timely detections of flooding to help support emergency response efforts. In this study, we leverage publicly available C-band SAR observations from the European Space Agency’s Sentinel-1B (S1B) satellite, collected on 30 August, and X-band SAR imagery collected on 1 September by the Airbus TanDEM-X (TDX) satellite made available through the NASA Commercial Smallsat Data Acquisition (CSDA) program. For each dataset, one co-polarized, StripMap, Radiometric Terrain Corrected (RTC) image was used to create a binary water/no water classification map by referencing permanent water in the Cropland Data Layer (CDL) dataset to determine thresholds. A validation dataset of randomly distributed “ground truth” points was generated using optical imagery from PlanetScope on 31 August, where the domain had relatively little cloud cover. We found that the S1B- and TDX-derived open water maps achieved overall accuracies of 94.17% and 91.57%, respectively. The variation in performance is attributed to both the penetrative abilities of C- and X-band SAR wavelengths in vegetated areas and the increased spatial resolution of the commercial SAR (~3 m) over Sentinel-1 (30 m). While publicly available Sentinel-1 observations are commonly relied upon in response and recovery efforts, these results suggest that including commercial X-band SAR imagery could be beneficial by providing both increased spatial resolution and more frequent revisits when deriving post-event flood mapping products.

Alexander M Melancon↗
NASA NTRS2024

Cali Urban Development: Using NASA Earth Observations to Assess Wetlands and Land Reclamation in Cali, Colombia

Recent research has documented the global decline of wetlands, largely attributed to increased urbanization and agriculture. This NASA DEVELOP study partnered with two local environmental entities in Cali, Colombia: The Fundación Dinamizadores Ambientales and the Departamento Administrativo de Gestión del Medio Ambiente. The team utilized Earth observations to evaluate trends in wetland extent, potential, and land cover in Cali between 2002 and 2023. A supervised classifier was generated within Google Earth Engine to create land use analyses of the region using Landsat 5 TM, Landsat 8 OLI, and Landsat 9 OLI-2 imagery. To identify locations of wetland potential within the study area, wetland probability was assessed by inputting PlanetScope, Sentinel-2 MSI, and partner-provided datasets into the Wetland Intrinsic Potential Tool in ArcGIS Pro and R. Data from Sentinel-1 C-SAR, Sentinel 2-MSI, and Suomi-NPP VIIRS were used to evaluate wetland extent using the Wetland Extent 3.0 Tool in3 Python. Overall, results indicated high wetland potential, particularly in the southeast region where agricultural areas were previously wetlands. Outputs also suggest a vast network of riparian wetlands in Cali. This study did not investigate socioeconomic data as it relates to wetlands, which is an avenue for future research. This project supplemented research into links between land use change, wetland extent, and wetland potential, and provided partner organizations with an objective foundation from which they can identify at-risk wetlands and develop community initiatives for management, conservation, and education.

Cali↗
NASA NTRSDate not supplied

Determining True Sensor Spatial Resolution of Very High Resolution Optical Imagery

Some satellite data is delivered in images with gridded pixels. This gridded pixel size is often assumed to be the spatial resolution of the satellite sensor; however, this is not always the case. An image can be grided to any arbitrary pixel size, but the sensor resolution will remain constant. For example, an image with a pixel grid size much smaller than the sensor resolution will appear blurry along what should be sharp transitions. This discrepancy between an image’s pixel size and true sensor spatial resolution can be the source of much confusion and even misinformation among data users, which may lead them to waste time and resources on using images that do not suit their spatial resolution needs. This presentation will highlight our evaluation of the true spatial resolution of various government and commercial images in the pixel size range of 0.3 m to 60 m. Images evaluated include ESA’s Sentinel-2 (60 m, 20 m, 10 m pixels), USGS’s Landsat 8/9 (30 m & 15 m pixels), Planet’s SuperDoves (3 m pixels), BlackSky’s Globals (~1 m pixels), and the optical bands of Maxar’s WorldView-2 (2.4 m – 0.41 m pixels) and WorldView-3 (1.38 m – 0.31 m pixels). Our evaluation of true sensor spatial resolution, or ‘footprint size’ is based on the sensor’s line spread function (LSF). We calculate the width at half the height of the LSF to find the full width at half maximum (FWHM). The FWHM is how we report sensor spatial resolution. Different objects are examined for constructing the LSF depending on the sensor spatial resolution. Coarser resolution sensors in this evaluation such as Sentinel-2 and Landsat 8/9 are examined at bridges over a dark water background. The bright bridge acts as a line impulse, giving a sensor’s line spread function (LSF) in one direction. Additionally, we simulate the impacts of bridge width on the apparent LSF to obtain a true LSF without the effects of bridge width for these sensors. Finer resolution sensors will image the irregularities in bridges such as trusses, sidewalks, and in some cases painted lines, interfering with the LSF construction. Instead, these sensors are evaluated at large (60 m – 140 m) black and white checkerboards known as Cal/Val sites. At these locations, the image’s transition from black to white is extracted as an edge spread function (ESF). We calculate the derivative of this ESF to obtain the sensor’s LSF. From there, we find the FWHM as we do for the coarser resolution images. With the FWHM and pixel size, we determine how over- or under-sampled the images are. When the ratio of a sensor’s spatial resolution and the gridded image’s pixel size is less than 1, the image is considered under-sampled. In this case, each pixel’s information is unique but only a portion of that pixel’s ground area has been measured. On the other side, if the ratio is greater than 1, the image is considered over-sampled. That is, each pixel’s information is sourced from within the ground extent of the pixel and some extent outside additionally. We will show the true spatial resolution and the extent of over-/under-sampling in the imagery from ESA’s Sentinel-2 (60 m, 20 m, 10 m pixels), USGS’s Landsat 8/9 (30 m & 15 m pixels), Planet’s SuperDoves (3 m pixels), BlackSky’s Globals (~1 m pixels), and the optical bands of Maxar’s WorldView-2 (2.4 m – 0.41 m pixels) and WorldView-3 (1.38 m – 0.31 m pixels).

Alana Semple↗
DOE OSTI2022

Cross-scale sensing of field-level crop residue cover: Integrating field photos, airborne hyperspectral imaging, and satellite data

Conservation tillage practices can bring benefits to agricultural sustainability. Accurate spatial and temporal resolved information of field-scale crop residue cover, which reflects tillage intensity, is highly valuable for evaluating the outcomes of government conservation programs and voluntary ecosystem service markets, as well as facilitating agroecosystem modeling to quantify cropland biogeochemical processes. Remote sensing has the potential to cost-effectively detect crop residue cover, however, existing regional-scale studies were limited by insufficient ground truth data, scale mismatch between coarse satellite pixels and ground data, and the lack of key spectral data for detecting crop residues. Therefore, this study developed an innovative cross-sensing framework to integrate proximal sensing, airborne hyperspectral imaging, and satellite Earth Observation through deep learning to quantify field-level crop residue cover fractions at the regional scale. Specifically, we have collected intensive ground orthographic photos and conducted airborne hyperspectral surveys at corn and soybean fields of Champaign and nearby counties in Illinois, the heartland of the U.S. Corn Belt. Through semi-automatic labeling aided by ResNet-50 and superpixel image segmentation, we obtained 6719 records of ground residue fractions. With these ground data, we developed the 1-dimensional convolution neural network (CNN) model using airborne hyperspectral reflectance, which has 0.5m spatial resolution and 3–5 nm spectral resolution from 400 to 2400 nm, to predict residue fractions. By applying the CNN model to airborne pixels, we augmented “ground truth” data of crop residues and further combined them with Harmonized Landsat and Sentinel-2 (HLS) satellite data to quantify regional residue fractions at 30 m resolution. Results show that airborne hyperspectral imagery with CNN can accurately detect residue fractions (R 2 = 0.82, relative RMSE = 11.73%) to effectively generate quasi “ground truth” data to support satellite upscaling to all fields. With independent ground data for testing, we found that the ground-airborne-satellite integrative framework achieved better predictions in estimating crop residue cover (R 2 = 0.67, relative RMSE = 17.53%) than the conventional ground-satellite upscaling (R 2 = 0.22, relative RMSE = 32.09%). Here we also found that the shortwave infrared wavelengths, particularly 2100–2300 nm, are vital for predicting crop residue cover. Sentinel-2 and Landsat-8 data have a comparable capability to track residue fractions due to similar shortwave infrared wavelengths. This study highlights the high accuracy of hyperspectral imaging to detect agroecosystem tillage management practices and the advantages of cross-scale sensing to cost-effectively integrate multi-source data to quantify field-level agroecosystem variables across scales.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2019

Temporal multispectral and 3D analysis of Cerro de Pasco, Peru

Mining operations across the world often lead to contamination of land, water resources, ecosystems and in some cases, entire communities.Results of recent health and ground sampling studies revealed extensive lead contamination within the populace and around the City of Cerro de Pasco, Peru. Tailings excavated from a large open pit zinc mine in the center of the city have been aggregated in four large stockpiles within close proximity to neighborhoods, schools, and hospitals. Visual comparison of ASTER (Advanced Spaceborne Thermal Emission and Reflection Radiometer) imagery from 2001 and Sentinel-2 imagery from 2018 suggests a size increase in one tailing stockpile in particular near the neighborhood of Paragsha. Due to ongoing mining efforts, the hypothesis motivating the work presented here is that Pb-bearing minerals would be detectable through multispectral analysis, an increase in Pb mineral percent abundance would be observed and tailing stockpile volume would be detectable between 2001 and 2016. This hypothesis is tested using Spectral Angle Mapper (SAM), Adaptive Coherence Estimator (ACE), and Jeffries-Matusita distance calculation on ASTER (2001) and Sentinel-2 (2018) VNIR and SWIR bands. Volume and area estimate of tailing stockpiles were calculated using a photogrammetrically derived point cloud. SAM detected the presence of five Pb-bearing minerals around Cerro de Pasco and Paragsha. The results of the temporal SAM analysis displayed an increase of approximately 17% of Pb-bearing minerals around the greater Cerro de Pasco city area and approximately 11% for the neighborhood of Paragsha. Jeffries-Matusita distance results suggest clear correlation between contamination sources and affected locations. Total tailing stockpile volume was measured to be approximately 200,300,000 m 3 . Volume for Pile 4 was estimated to have increased by approximately 46,000,000 m 3 between 2001 and 2018. Lastly, these presented results will hopefully inspire and guide future remote sensing campaigns, perhaps involving a UAV or aircraft-based hyperspectral instrument.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2017

Assessment of canopy chlorophyll content retrieval in maize and soybean: Implications of hysteresis on the development of generic algorithms

Here, canopy chlorophyll content (Chl) closely relates to plant photosynthetic capacity, nitrogen status and productivity. The goal of this study is to develop remote sensing techniques for accurate estimation of canopy Chl during the entire growing season without re-parameterization of algorithms for two contrasting crop species, maize and soybean. These two crops represent different biochemical mechanisms of photosynthesis, leaf structure and canopy architecture. The relationships between canopy Chl and reflectance, collected at close range and resampled to bands of the Multi Spectral Instrument (MSI) aboard Sentinel-2, were analyzed in samples taken across the entirety of the growing seasons in three irrigated and rainfed sites located in eastern Nebraska between 2001 and 2005. Crop phenology was a factor strongly influencing the reflectance of both maize and soybean. Substantial hysteresis of the reflectance vs. canopy Chl relationship existed between the vegetative and reproductive stages. The effect of the hysteresis on vegetation indices (VI), applied for canopy Chl estimation, depended on the bands used and their formulation. The hysteresis greatly affected the accuracy of canopy Chl estimation by widely-used VIs with near infrared (NIR) and red reflectance (e.g., normalized difference vegetation index (NDVI), enhanced vegetation index (EVI) and simple ratio (SR)). VIs that use red edge and NIR bands (e.g., red edge chlorophyll index (CIred edge), red edge NDVI and the MERIS terrestrial chlorophyll index (MTCI)) were minimally affected by crop phenology (i.e., they exhibited little hysteresis) and were able to accurately estimate canopy Chl in two crops without algorithm re-parameterization and, thus, were found to be the best candidates for generic algorithms to estimate crop Chl using the surface reflectance products of MSI Sentinel-2.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

Identifying Urban Pluvial Frequency Flooding Hotspots Using the Topographic Control Index and Remote Sensing Radar Images for Early Warning Systems

Identifying areas that frequently experience post-rainfall ponding is essential for effective flood mitigation and planning. This study integrates Sentinel-1 radar imagery and the Topographic Control Index (TCI) to identify 378 flood-prone urban depressions in Beaumont, Texas. Out of 159 major rainfall events, only six had Sentinel-1 radar imagery acquired within six hours of peak rainfall, and these were used to generate the flood frequency map; the ground-based flood sensor data were used to verify that these selected events corresponded to actual peak rainfall and to validate radar-detected water pixels. Validation results showed 100% precision, 70.87% recall, an F1-score of 82.95%, and 71.32% overall accuracy. Approximately 84% of medium-to-high TCI depressions overlapped with Beaumont’s two-year inundation map, confirming a strong relationship between TCI and observed flooding. A total of 124 depressions retained significant water, and after excluding 25 engineered detention ponds, 99 natural depressions remained flood vulnerable. Among these, 74 depressions with medium or high TCI were identified as the highest-priority nuisance flooding hotspots. The results demonstrate that combining TCI with radar imagery provides a reliable and cost-effective approach for identifying areas prone to frequent urban ponding. This framework supports practical decision-making for drainage improvements, hotspot identification, and early-warning system development in urban flood-prone regions.

Sentinel-1 radar imagery↗
NASA NTRS2022

Gulf of Mexico Health & Air Quality Ii: Mapping Methane Emission Plumes Using Sunglint-Configured Imagery for Monitoring Offshore Oil and Gas Activity

Offshore oil and gas production in the United States is a major source of anthropogenic greenhouse gas emissions and accounts for nearly 30% of global oil and gas production. Methane venting and flaring are primary contributors to offshore emissions, and monitoring these activities is crucial for mitigating greenhouse gas emissions. Limited ground truthing and intermittent offshore satellite revisits make monitoring venting and flaring challenging. The Bureau of Ocean Energy Management (BOEM) and the Bureau of Safety and Environmental Enforcement (BSEE) oversee offshore oil and gas activity but rely primarily on operator-reported data. The non-profit organization SkyTruth monitors natural resources like methane and identifies sources of fugitive emissions. By combining BOEM and BSEE’s operational data along with observations from Sentinel-2 Multispectral Instrument (MSI), Landsat 8 Operational Land Imager (OLI) and Landsat 9 OLI-2, and PRecursore IperSpettrale della Missione Applicativa (PRISMA), the team further identified ultra-emitter point sources in the Gulf of Mexico using sunglint-configured imagery. We quantified these plume emission rates using the methodology from Varon et al. (2020). The team found three plumes in the Gulf of Mexico occurring between 2020 and 2022 using Sentinel-2 MSI and Landsat 9 OLI-2 imagery, in addition to the single plume identified by the Gulf of Mexico Health & Air Quality I team, and successfully quantified three plumes. Our statistical retrieval of three PRISMA images tasked over areas of interest yielded no methane plumes, despite a successful test of a known plume in Assam, India. These analyses serve as a proof of concept for the utility of remote sensing for methane emission monitoring offshore, which can complement regulator emission inventories and validate self-reported operator records.

sunglint↗
NASA NTRS2023

Lake Anna Water Resources: Using NASA Earth Observations to Identify Algal Event Risk Factors in Lake Anna and Help Inform Future Management Practices

Lake Anna is a man-made reservoir and popular recreation destination that spans over 13,000 acres-9,600 public and 3,400 private-in the Piedmont region of Virginia. The Lake has recently seen a rise in documented harmful algal blooms (HABs), which pose a variety of community and ecological concerns and are often exacerbated by anthropogenic factors, such as excess nutrient loads from agricultural runoff. NASA DEVELOP has partnered with the Virginia Department of Environmental Quality (DEQ) to help monitor cyanobacteria and nutrient pollution indicators across Lake Anna. The team utilized Earth observations (EO) and in situ ancillary data to identify and monitor algal bloom trends. The team used Landsat 8 Operational Land Imager (OLI), Landsat 9 OLI-2, Sentinel-2 Multispectral Instrument (MSI), and Sentinel-3 Ocean and Land Color Instrument (OLCI) to analyze water quality variables such as chlorophyll-a, turbidity, surface temperature, and cyanobacteria. Due to the lack of comprehensive in situ data and historic HAB event records, our ability to compare and validate EOs was limited. Additionally, deficient spatial resolutions, along with a geographically complicated shoreline, accentuated the spatial constraints we faced in our analysis. After examining EOs, our results indicated conditions conducive to the formation of HABs within the upper reaches of Lake Anna. Yet, spatially dependent limiting factors may have also influenced where these phenomena developed. When used in concert with existing in situ datasets, NASA EOs provide relevant stakeholders with more comprehensive analyses with which to engage in enhanced monitoring and watershed management.

cyanobacteria↗
NASA NTRS2024

Alaska Ecological Conservation: Using NASA Earth Observations to Identify Recent Changes in River Ice Phenology and Its Impacts on Caribou Migration

Each fall, caribou (Rangifer tarandus) in the Western Arctic Herd migrate hundreds of kilometers across northwestern Alaska to acquire seasonal resources and reach wintering grounds. Various rivers intersect migration paths, and caribou can only cross over open water or high-ice extents but are unable to cross rivers in stages of partial freezing. Recent temperature increases in Alaska can alter the timing and duration of ice formation periods, impeding migratory patterns. The Massachusetts NASA DEVELOP team partnered with the National Park Service in Alaska to detect river ice onset dates and formation periods using Landsat 8 Operational Land Imager and Landsat 9 Operational Land Imager-2, Sentinel-1 C-band Synthetic Aperture Radar and Sentinel-2A/B MultiSpectral Instrument imagery in Google Earth Engine. This feasibility analysis measured ice coverage using the Normalized Difference Infrared Index, Relative Difference River Ice, and Vertical-Vertical/Vertical-Horizontal backscatter values based on the spectral and surface characteristics of rivers. The team produced annual freezing timelines, time series plots, and maps at three river stretches to analyze river ice phenology changes. Radar imagery assessed ice coverage more accurately, while optical imagery better identified ice onset dates. Meanwhile indices were unable to robustly establish ice formation thresholds across the study period. These study results can help the National Park Service to better evaluate spatiotemporal migratory shifts and contextualize recent regional caribou declines.

river phenology↗
DOE OSTI2020

HIV-1 transmitted drug resistance surveillance: shifting trends in study design and prevalence estimates

HIV-1 transmitted drug resistance (TDR) prevalence increased during the initial years of the antiretroviral therapy (ART) global scale-up. Few studies have examined recent trends in TDR prevalence using published genetic sequences and described the characteristics of ART-naïve persons from whom these published sequences have been obtained. We identified 125 studies published between 2014 and 2019 for which HIV-1 reverse transcriptase (RT) with or without protease from ≥50 ART-naïve adult persons were submitted to the GenBank sequence database. The population characteristics and TDR prevalence were compared to those in 122 studies published in the preceding five years between 2009 and 2013. TDR prevalence was analysed using median study-level and person-level data. The 2009 to 2013 and 2014 to 2019 studies reported sequence data from 32,866 and 41,724 ART-naïve persons respectively. Studies from the low- and middle-income country (LMIC) regions in sub-Saharan Africa, South/Southeast Asia and Latin America/Caribbean accounted for approximately two-thirds of the studies during each period. Between the two periods, the proportion of studies from sub-Saharan Africa and from South/Southeast Asia countries other than China decreased from 43% to 32% and the proportion of studies performed at sentinel sites for recent HIV-1 infection decreased from 33% to 22%. Between 2014 and 2019, median study-level TDR prevalence was 4.1% in South/Southeast Asia, 6.0% in sub-Saharan Africa, 9.1% in Latin America/Caribbean, 8.5% in Europe and 14.2% in North America. In the person-level analysis, there was an increase in overall, NNRTI and two-class NRTI/NNRTI resistance in sub-Saharan Africa; an increase in NNRTI resistance in Latin America/Caribbean, and an increase in overall, NNRTI and PI resistance in North America. Overall, NNRTI and dual NRTI/NNRTI-associated TDR prevalence was significantly higher in sub-Saharan Africa studies published between 2014 and 2019 compared with those published between 2009 and 2013. The decreasing proportion of studies from the hardest hit LMIC regions and the shift away from sentinel sites for recent infection suggests that global TDR surveillance efforts and publication of findings require renewed emphasis.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2015

Radioguided localisation of impalpable breast lesions using 99m-Technetium macroaggregated albumin: Lessons learnt during introduction of a new technique to guide preoperative localisation

Preoperative wire-guided localisation (WGL) of impalpable breast lesions is widely used but can be technically difficult. Risks include wire migration, inaccurate placement, and inadequate surgical margins. Research shows that radioguided occult lesion localisation (ROLL) is quicker, easier, and can improve surgical and cosmetic outcomes. An audited introduction of ROLL was conducted to validate the technique as a feasible alternative to WGL. Fifty patients with single impalpable lesions and biopsy proven malignancy or indeterminate histology underwent WGL followed by intralesional radiopharmaceutical injection of 99m-Technetium macroaggregated albumin. Postprocedural mammography was performed to demonstrate wire position, and scintigraphy to evaluate radiopharmaceutical migration. Lymphoscintigraphy and intraoperative sentinel node biopsy were performed if indicated, followed by lesion localisation and excision using a gamma probe. Specimen imaging was performed, with immediate reexcision for visibly inadequate margins. Accurate localisation was achieved in 86% of patients with ROLL compared to 72% with WGL. All lesions were successfully removed, with clear margins in 71.8% of malignant lesions. Reexcision and intraoperative sentinel node localisation rates were equivalent to preaudit figures for WGL. ROLL was easy to perform and problems were infrequent. Inaccurate radiopharmaceutical placement necessitating WGL occurred in four patients. Minor radiopharmaceutical migration was common, but precluded using ROLL in only two cases. ROLL is effective, simple, inexpensive, and easily learnt; however, preoperative confirmation of correct radiopharmaceutical placement using mammography and the gamma probe is important to help ensure successful lesion removal. Insertion of a backup hookwire is recommended during the initial introduction of ROLL.

62 RADIOLOGY AND NUCLEAR MEDICINE↗
DOE OSTI2022

Evaluation of satellite Leaf Area Index in California vineyards for improving water use estimation

Remote sensing estimation of evapotranspiration (ET) directly quantifies plant water consumption and provides essential information for irrigation scheduling, which is a pressing need for California vineyards as extreme droughts become more frequent. Many ET models take satellite-derived Leaf Area Index (LAI) as a major input, but how uncertainties of LAI estimations propagate to ET and the partitioning between evaporation and transpiration is poorly understood. Here we assessed six satellite-based LAI estimation approaches using Landsat and Sentinel-2 images against ground measurements from four vineyards in California and evaluated ET sensitivity to LAI in the thermal-based two-source energy balance (TSEB) model. We found that radiative transfer modeling-based approaches predicted low to medium LAI well, but they significantly underestimated high LAI in highly clumped vine canopies (RMSE ~ 0.97 to 1.27). Cubist regression models trained with ground LAI measurements from all vineyards achieved high accuracy (RMSE ~ 0.3 to 0.48), but these empirical models did not generalize well between sites. Red edge bands and the related vegetation index (VI) from the Sentinel-2 satellite contain complementary information of LAI to VIs based on near-infrared and red bands. TSEB ET was more sensitive to positive LAI biases than negative ones. Positive LAI errors of 50% resulted in up to 50% changes in ET, while negative biases of 50% in LAI caused less than 10% deviations in ET. However, even when ET changes were minimal, negative LAI errors of 50% led to up to a 40% reduction in modeled transpiration, as soil evaporation and plant transpiration responded to LAI change divergently. These findings call for careful consideration of satellite LAI uncertainties for ET modeling, especially for the partitioning of water loss between vine and soil or cover crop for effective vineyard irrigation management.

54 ENVIRONMENTAL SCIENCES↗