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At least 271 records · Page 15

Flash Drought Onset and Development Mechanisms Captured With Soil Moisture and Vegetation Data Assimilation

Flash droughts evolve and intensify rapidly under the influence of anomalous atmospheric conditions. In this study, we investigate the role of assimilating remotely sensed soil moisture (SM) and vegetation properties in capturing the evolution and impacts of two flash droughts in the Northern Great Plains. We find that during 2016 drought triggered by anomalously high temperatures and excessive evaporative demands, multivariate data assimilation (DA) of MODIS-derived leaf area index (LAI) and Soil Moisture Active Passive SM within Noah-Multiparameterization model helps capture elevated transpiration at onset. Assimilation of LAI particularly helped model the resulting rapid decline in SM during onset with as high as 10.0% steeper rate of decline compared to the simulation without any assimilation. Modeled-SM anomalies exhibit a 7.5% and 11.7% increase in similarity with Evaporative Stress Index (ESI) data and U.S. Drought Monitor (USDM) maps, respectively. In contrast, during 2017 flash drought driven by record-low precipitation during summers, SM assimilation resulted in largest rates of decline in rootzone SM, as large as 48.4% compared to results from no assimilation. Multivariate DA of SM and LAI results in 6.7% and 14.3% higher spatial similarity with ESI and USDM, respectively, and is necessary to model rapid intensification caused by anomalous precipitation deficits. This study elucidates the need to incorporate multiple observational constraints from remote sensing to effectively capture rapid onset rates, intensification, and severity of flash drought following different propagation mechanisms. This is fundamental for drought early detection to provide a wider window of response and implement efficient mitigation strategies.

Shahryar K. Ahmad↗

Extending the Utility of Space-Borne Snow Water Equivalent Observations Over Vegetated Areas With Data Assimilation

Snow is a vital component of the earth system, yet no snow-focused satellite remote sensing platform currently exists. In this study, we investigate how synthetic observations of snow water equivalent (SWE) representative of a synthetic aperture radar remote sensing platform could improve spatiotemporal estimates of snowpack. We use a fraternal twin observing system simulation experiment, specifically investigating how much snow simulated using widely used models and forcing data could be improved by assimilating synthetic observations of SWE. We focus this study across a 24° x 37° domain in the western USA and Canada, simulating snow at 250 m resolution and hourly time steps in water year 2019. We perform two data assimilation experiments, including (1) a simulation excluding synthetic observations in forests where canopies obstruct remote sensing retrievals and (2) a simulation inferring snow distribution in forested grid cells using synthetic observations from nearby canopy-free grid cells. Results found that, relative to a nature run, or assumed true simulation of snow evolution, assimilating synthetic SWE observations improved average SWE biases at maximum snowpack timing in shrub, grass, crop, bare-ground, and wetland land cover types from 14 %, to within 1 %. However, forested grid cells contained a disproportionate amount of SWE volume. In forests, SWE mean absolute errors at the time of maximum snow volume were 111 mm and average SWE biases were on the order of 150 %. Here the data assimilation approach that estimated forest SWE using observations from the nearest canopy-free grid cells substantially improved these SWE biases (18 %) and the SWE mean absolute error (27 mm). Simulations employing data assimilation also improved estimates of the temporal evolution of both SWE and runoff, even in spring snowmelt periods when melting snow and high snow liquid water content prevented synthetic SWE retrievals. In fact, in the Upper Colorado River region, melt-season SWE biases were improved from 63 % to within 1 %, and the Nash–Sutcliffe efficiency of runoff improved from −2.59 to 0.22. These results demonstrate the value of data assimilation and a snow-focused globally relevant remote sensing platform for improving the characterization of SWE and associated water availability.

Justin Pflug↗

Toward NASA/GMAO Coupled Data Assimilation Using JEDI

NASA’s Global Modeling and Assimilation Office (GMAO) is establishing coupled Earth system capabilities using the Joint Effort for Data Assimilation Integration (JEDI) framework, developed in collaboration with the Joint Center for Satellite Data Assimilation(JCSDA). Marine and atmospheric components will utilize a weakly-coupled data assimilation approach. The implementation of the sea-ice, ocean, and coupled analysis (SOCA) component of JEDI is highlighted here, while parallel work on atmospheric data assimilation is also in progress. Improvements to the ocean data assimilation system (ODAS) include: 1) adopting the JEDI framework, 2) a new coupled GCM, and 3) incorporation of new observation sources.

Dorukhan Ardağ↗

Effect of data assimilation in the Polar WRF with 3DVAR on the prediction of radiation, heat flux, cloud, and near surface atmospheric variables over Svalbard

Although the Polar Weather Research and Forecasting (PWRF) model has been developed for polar environments, simulations of atmospheric states in the polar region still have large uncertainties. Therefore, the effects of data assimilation (DA) to improve forecasts in the polar region were investigated for September 2017 using PWRF and the three-dimensional variational (3DVAR) DA method. The experiments without DA and those with DA assimilating only conventional observations and both conventional observations and satellite radiance data were performed. The forecasts from all experiments both without and with DA underestimated (overestimated) the downward longwave (shortwave) radiation flux due to the underestimation of the amount of Arctic clouds. When satellite radiance data (i.e., the Advanced Microwave Sounding Unit-A (AMSU-A) and Microwave Humidity Sounder (MHS)) were assimilated in addition to conventional observations in the PWRF, the distribution and amount of water vapor became closer to observations, which improves cloud liquid water forecasts. Therefore, when both conventional observations and radiance data were assimilated, the 25–30 h forecast errors of the downward longwave and shortwave radiation fluxes and sensible and latent heat fluxes decreased by 12.7%, 8.1%, 3.2%, and 7.8% with the WSM5 scheme and by 17.1%, 4.7%, 2.5%, and 3.1% with the 2-moment Morrison scheme, respectively, compared to those in the experiments without DA. The forecast errors of the 10 m wind and 2 m temperature with DA were smaller than those without DA at most observation stations. Therefore, the uncertainties of the Arctic forecasts in the PWRF decreased when using DA. To further improve Arctic forecasts, the assimilation of various additional satellite data is necessary.

54 ENVIRONMENTAL SCIENCES↗

New perspectives on butyrate assimilation in Rhodospirillum rubrum S1H under photoheterotrophic conditions

Background: The great metabolic versatility of the purple non-sulfur bacteria is of particular interest in green technology. Rhodospirillum rubrum S1H is an α-proteobacterium that is capable of photoheterotrophic assimilation of volatile fatty acids (VFAs). Butyrate is one of the most abundant VFAs produced during fermentative biodegradation of crude organic wastes in various applications. While there is a growing understanding of the photoassimilation of acetate, another abundantly produced VFA, the mechanisms involved in the photoheterotrophic metabolism of butyrate remain poorly studied. Results: In this work, we used proteomic and functional genomic analyses to determine potential metabolic pathways involved in the photoassimilation of butyrate. We propose that a fraction of butyrate is converted to acetyl-CoA, a reaction shared with polyhydroxybutyrate metabolism, while the other fraction supplies the ethylmalonyl-CoA (EMC) pathway used as an anaplerotic pathway to replenish the TCA cycle. Surprisingly, we also highlighted a potential assimilation pathway, through isoleucine synthesis and degradation, allowing the conversion of acetyl-CoA to propionyl-CoA. We tentatively named this pathway the methylbutanoyl-CoA pathway (MBC). An increase in isoleucine abundance was observed during the early growth phase under butyrate condition. Nevertheless, while the EMC and MBC pathways appeared to be concomitantly used, a genome-wide mutant fitness assay highlighted the EMC pathway as the only pathway strictly required for the assimilation of butyrate. Conclusion: Photoheterotrophic growth of Rs. rubrum with butyrate as sole carbon source requires a functional EMC pathway. In addition, a new assimilation pathway involving isoleucine synthesis and degradation, named the methylbutanoyl-CoA (MBC) pathway, could also be involved in the assimilation of this volatile fatty acid by Rs. rubrum.

59 BASIC BIOLOGICAL SCIENCES↗

Background Error Covariance Estimation Using Information from a Single Model Trajectory with Application to Ocean Data Assimilation

An attractive property of ensemble data assimilation methods is that they provide flow dependent background error covariance estimates which can be used to update fields of observed variables as well as fields of unobserved model variables. Two methods to estimate background error covariances are introduced which share the above property with ensemble data assimilation methods but do not involve the integration of multiple model trajectories. Instead, all the necessary covariance information is obtained from a single model integration. The Space Adaptive Forecast error Estimation (SAFE) algorithm estimates error covariances from the spatial distribution of model variables within a single state vector. The Flow Adaptive error Statistics from a Time series (FAST) method constructs an ensemble sampled from a moving window along a model trajectory.SAFE and FAST are applied to the assimilation of Argo temperature profiles into version 4.1 of the Modular Ocean Model (MOM4.1) coupled to the GEOS-5 atmospheric model and to the CICE sea ice model. The results are validated against unassimilated Argo salinity data. They show that SAFE and FAST are competitive with the ensemble optimal interpolation (EnOI) used by the Global Modeling and Assimilation Office (GMAO) to produce its ocean analysis. Because of their reduced cost, SAFE and FAST hold promise for high-resolution data assimilation applications.

Error Covariance↗

Background Error Covariance Estimation using Information from a Single Model Trajectory with Application to Ocean Data Assimilation into the GEOS-5 Coupled Model

An attractive property of ensemble data assimilation methods is that they provide flow dependent background error covariance estimates which can be used to update fields of observed variables as well as fields of unobserved model variables. Two methods to estimate background error covariances are introduced which share the above property with ensemble data assimilation methods but do not involve the integration of multiple model trajectories. Instead, all the necessary covariance information is obtained from a single model integration. The Space Adaptive Forecast error Estimation (SAFE) algorithm estimates error covariances from the spatial distribution of model variables within a single state vector. The Flow Adaptive error Statistics from a Time series (FAST) method constructs an ensemble sampled from a moving window along a model trajectory. SAFE and FAST are applied to the assimilation of Argo temperature profiles into version 4.1 of the Modular Ocean Model (MOM4.1) coupled to the GEOS-5 atmospheric model and to the CICE sea ice model. The results are validated against unassimilated Argo salinity data. They show that SAFE and FAST are competitive with the ensemble optimal interpolation (EnOI) used by the Global Modeling and Assimilation Office (GMAO) to produce its ocean analysis. Because of their reduced cost, SAFE and FAST hold promise for high-resolution data assimilation applications.

Data Assimilation↗

Assimilation of SMOS Retrieved Soil Moisture into the Land Information System

Soil moisture retrievals from the Soil Moisture and Ocean Salinity (SMOS) instrument are assimilated into the Noah land surface model (LSM) within the NASA Land Information System (LIS). Before assimilation, SMOS retrievals are bias-corrected to match the model climatological distribution using a Cumulative Distribution Function (CDF) matching approach. Data assimilation is done via the Ensemble Kalman Filter. The goal is to improve the representation of soil moisture within the LSM, and ultimately to improve numerical weather forecasts through better land surface initialization. We present a case study showing a large area of irrigation in the lower Mississippi River Valley, in an area with extensive rice agriculture. High soil moisture value in this region are observed by SMOS, but not captured in the forcing data. After assimilation, the model fields reflect the observed geographic patterns of soil moisture. Plans for a modeling experiment and operational use of the data are given. This work helps prepare for the assimilation of Soil Moisture Active/Passive (SMAP) retrievals in the near future.

Data Assimilation↗

Improving 7-Day Forecast Skill by Assimilation of Retrieved AIRS Temperature Profiles

We conducted a new set of Data Assimilation Experiments covering the period January 1 to February 29, 2016 using the GEOS-5 DAS. Our experiments assimilate all data used operationally by GMAO (Control) with some modifications. Significant improvement in Global and Southern Hemisphere Extra-tropical 7-day forecast skill was obtained when: We assimilated AIRS Quality Controlled temperature profiles in place of observed AIRS radiances, and also did not assimilate CrISATMS radiances, nor did we assimilate radiosonde temperature profiles or aircraft temperatures. This new methodology did not improve or degrade 7-day Northern Hemispheric Extra-tropical forecast skill. We are conducting experiments aimed at further improving of Northern Hemisphere Extra-tropical forecast skill.

AIRS Temperature Profiles↗

Impact of GPM Rainrate Data Assimilation on Simulation of Hurricane Harvey (2017)

Built upon Tropical Rainfall Measuring Mission (TRMM) legacy for next-generation global observation of rain and snow. The GPM was launched in February 2014 with Dual-frequency Precipitation Radar (DPR) and GPM Microwave Imager (GMI) onboard. The GPM has a broad global coverage approximately 70deg S -70deg N with a swath of 245/125-km for the Ka (35.5 GHz)/Ku (13.6 GHz) band radar, and 850-km for the 13-channel GMI. GPM also features better retrievals for heavy, moderate, and light rain and snowfall To develop methodology to assimilate GPM surface precipitation data with Grid-point Statistical Interpolation (GSI) data assimilation system and WRF ARW model To investigate the potential and the value of utilizing GPM observation into NWP for operational environment The GPM rain rate data has been successfully assimilated using the GSI rain data assimilation package. Impacts of rain rate data have been found in temperature and moisture fields of initial conditions. 2.Assimilation of either GPM IMERG or GPROF rain product produces significant improvement in precipitation amount and structure for Hurricane Harvey (2017) forecast. Since IMERG data is available half-hourly, further forecast improvement is expected with continuous assimilation of IMERG data

Precipitation↗

Data Assimilation of Terrestrial Water Storage Observations to Estimate Precipitation Fluxes: A Synthetic Experiment

The Gravity Recovery and Climate Experiment (GRACE) mission and its Follow-On (GRACE-FO) mission provide unprecedented observations of terrestrial water storage (TWS) dynamics at basin to continental scales. Established GRACE data assimilation techniques directly adjust the simulated water storage components to improve the estimation of groundwater, streamflow, and snow water equivalent. Such techniques artificially add/subtract water to/from prognostic variables, thus upsetting the simulated water balance. To overcome this limitation, we propose and test an alternative assimilation scheme in which precipitation fluxes are adjusted to achieve the desired changes in simulated TWS. Using a synthetic data assimilation experiment, we show that the scheme improves performance skill in precipitation estimates in general, but that it is more robust for snowfall than for rainfall, and it fails in certain regions with strong horizontal gradients in precipitation. The results demonstrate that assimilation of TWS observations can help correct (adjust) the model’s precipitation forcing and, in turn, enhance model estimates of TWS, snow mass, soil moisture, runoff, and evaporation. A key limitation of the approach is the assumption that all errors in TWS originate from errors in precipitation. Nevertheless, the proposed approach produces more consistent improvements in simulated runoff than the established GRACE data assimilation techniques.

Data Assimilation↗

Ensemble‐Based Assimilation of Satellite All‐Sky Microwave Radiances Improves Intensity and Rainfall Predictions for Hurricane Harvey (2017)

Abstract Ensemble‐based data assimilation of radar observations across inner‐core regions of tropical cyclones (TCs) in tandem with satellite all‐sky infrared (IR) radiances across the TC domain improves TC track and intensity forecasts. This study further investigates potential enhancements in TC track, intensity, and rainfall forecasts via assimilation of all‐sky microwave (MW) radiances using Hurricane Harvey (2017) as an example. Assimilating Global Precipitation Measurement constellation all‐sky MW radiances in addition to GOES‐16 all‐sky IR radiances reduces the forecast errors in the TC track, rapid intensification (RI), and peak intensity compared to assimilating all‐sky IR radiances alone, including a 24‐hr increase in forecast lead‐time for RI. Assimilating all‐sky MW radiances also improves Harvey's hydrometeor fields, which leads to improved forecasts of rainfall after Harvey's landfall. This study indicates that avenues exist for producing more accurate forecasts for TCs using available yet underutilized data, leading to better warnings of and preparedness for TC‐associated hazards in the future.

54 ENVIRONMENTAL SCIENCES↗

Data assimilation empowered neural network parametrizations for subgrid processes in geophysical flows

In the past couple of years, there has been a proliferation in the use of machine learning approaches to represent subgrid-scale processes in geophysical flows with an aim to improve the forecasting capability and to accelerate numerical simulations of these flows. Despite its success for different types of flow, the online deployment of a data-driven closure model can cause instabilities and biases in modeling the overall effect of subgrid-scale processes, which in turn leads to inaccurate prediction. To tackle this issue, we exploit the data assimilation technique to correct the physics-based model coupled with the neural network as a surrogate for unresolved flow dynamics in multiscale systems. In particular, we use a set of neural network architectures to learn the correlation between resolved flow variables and the parametrizations of unresolved flow dynamics and formulate a data assimilation approach to correct the hybrid model during their online deployment. We illustrate our framework in a set of applications of the multiscale Lorenz 96 system for which the parametrization model for unresolved scales is exactly known, and the two-dimensional Kraichnan turbulence system for which the parametrization model for unresolved scales is not known a priori. Our analysis, therefore, comprises a predictive dynamical core empowered by (i) a data-driven closure model for subgrid-scale processes, (ii) a data assimilation approach for forecast error correction, and (iii) both data-driven closure and data assimilation procedures. We show significant improvement in the long-term prediction of the underlying chaotic dynamics with our framework compared to using only neural network parametrizations for future prediction. Moreover, we demonstrate that these data-driven parametrization models can handle the non-Gaussian statistics of subgrid-scale processes, and effectively improve the accuracy of outer data assimilation workflow loops in a modular nonintrusive way.

42 ENGINEERING↗

Bacterial community dynamics explain carbon mineralization and assimilation in soils of different land-use history

Soil dwelling microorganisms are key players in the terrestrial carbon cycle, driving both the degradation and stabilization of soil organic matter. Bacterial community structure and function vary with respect to land use; yet the ecological drivers of this variation remain poorly described and difficult to predict. For this work, we conducted a multi-substrate DNA-stable isotope probing experiment across cropland, old-field, and forest habitats to link carbon mineralization dynamics with the dynamics of bacterial growth and carbon assimilation. We tracked the movement of 13 C derived from five distinct carbon sources as it was assimilated into bacterial DNA over time. We show that carbon mineralization, community composition, and carbon assimilation dynamics all differed with respect to land use. We also show that microbial community dynamics affect carbon assimilation dynamics and are associated with soil DNA content. Soil DNA yield is easy to measure and may be useful in predicting microbial community dynamics linked to soil carbon cycling. Soil dwelling microorganisms are key players in the terrestrial carbon cycle, driving both the degradation and stabilization of soil organic matter. Microbial communities vary with respect to land use, but we still have an incomplete understanding of how variation in community structure links to variation in community function. DNA stable isotope probing (DNA-SIP) is a high-resolution method that can identify specific microbial taxa that assimilate carbon in situ. We conducted a large-scale multi-substrate DNA-SIP experiment to explore differences in bacterial activity across land-use regimes. We show that microbial community dynamics vary with land use, that these dynamics are linked to soil carbon cycling, and that they are associated with easily measured soil properties.

59 BASIC BIOLOGICAL SCIENCES↗

Benefits and Cautions in Data Assimilation Strategies: An Example of Modeling Groundwater Recharge

Assimilating recent observations improves model outcomes for real-time assessments of groundwater processes. This is demonstrated in estimating time-varying recharge to a shallow fractured-rock aquifer in response to precipitation. Results from estimating the time-varying water-table altitude (h) and recharge, and their error covariances, are compared for forecasting, filtering, and fixed-lag smoothing (FLS), which are implemented using the Kalman Filter as applied to a data-driven, mechanistic model of recharge. Forecasting uses past observations to predict future states and is the current paradigm in most groundwater modeling investigations; filtering assimilates observations up to the current time to estimate current states; and FLS estimates states following a time lag over which additional observations are collected. Results for forecasting yield a large error covariance relative to the magnitude of the expected recharge. With assimilating recent observations of h, filtering and FLS produce estimates of recharge that better represent time-varying observations of h and reduce uncertainty in comparison to forecasting. Although model outcomes from applying data assimilation through filtering or FLS reduce model uncertainty, they are not necessarily mass conservative, whereas forecasting outcomes are mass conservative. Mass conservative outcomes from forecasting are not necessarily more accurate, because process errors are inherent in any model. Improvements in estimating real-time groundwater conditions that better represent observations need to be weighed for the model application against outcomes with inherent process deficiencies. In conclusion, results from data assimilation strategies discussed in this investigation are anticipated to be relevant to other groundwater processes models where system states are sensitive to system inputs.

aquifer recharge↗

Rock Physics-Based Data Assimilation of Integrated Continuous Active-Source Seismic and Pressure Monitoring Data during Geological Carbon Storage

Summary There has been substantial controversy concerning the role of geological carbon storage (GCS) in sequestering anthropogenic carbon emissions to mitigate climate change and global warming. Arguments center on the inability to monitor a geological storage site precisely and continuously, especially highlighting the associated costs and spatiotemporal trade-offs when using conventional subsurface monitoring techniques (well logs, core samples, chemical tracers, and 4D seismics). Active surveillance of GCS sites is essential for managing and mitigating potential leaks but is also required by regulation. With the goal of enhancing the monitoring capability at GCS sites, we present a rock physics-based joint data assimilation model to study a popular GCS site at Cranfield, Mississippi, USA. Synthetic continuous active-source seismic monitoring (CASSM) data (in the form of Vp and Qp measurements) and wellbore pressure monitoring data are assimilated with an ensemble of reservoir realizations to monitor gas saturation and reservoir pressure changes over a period of 100 years. Synthetic seismic attributes are generated using rock physics models (RPMs) and wellbore pressure monitoring data are extracted from the ground truth. Two assimilation methods, ensemble Kalman filter (EnKF) and ensemble Kalman smoother (EnKS), are tested in an observation system simulation experiment (OSSE) environment to assess the prediction accuracy of the individual and composite observation systems. The joint monitoring system achieves more accurate estimates of gas saturation and pressure, across the time span from start of injection to end of forecast, as compared to a single type of monitoring tool and irrespective of data assimilation algorithm choice. These results indicate that jointly assimilated data from two types of sensors (in this case, crosswell seismic and downhole pressure) may lead to a more risk-reducing monitoring design. One would expect that more data, vis-à-vis inclusion of a new sensor type, will improve the accuracy of any GCS monitoring system. However, from a practical standpoint, one important question is whether such a gain in accuracy is worth the additional cost associated with the new sensor. This paper focuses on quantifying the gain in accuracy, such that a practitioner can answer this question.

Engineering↗

Effects of sounding temperature assimilation on weather forecasting - Model dependence studies

In comparing various methods for the assimilation of remote sounding information into numerical weather prediction (NWP) models, the problem of model dependence for the different results obtained becomes important. The paper investigates two aspects of the model dependence question: (1) the effect of increasing horizontal resolution within a given model on the assimilation of sounding data, and (2) the effect of using two entirely different models with the same assimilation method and sounding data. Tentative conclusions reached are: first, that model improvement as exemplified by increased resolution, can act in the same direction as judicious 4-D assimilation of remote sounding information, to improve 2-3 day numerical weather forecasts. Second, that the time continuous 4-D methods developed at GLAS have similar beneficial effects when used in the assimilation of remote sounding information into NWP models with very different numerical and physical characteristics.

Ghil, M.↗

The relative contributions of increased resolution in the data assimilation and in the forecast model to satellite data impact

Assimilation cycles were carried out with two versions of the GLAS second order GCM: a coarse version with 4 deg latitude by 5 deg longitude resolution, called the C model, and a fine version with 2.5 deg latitude by 3 deg longitude resolution called the F model. For the two DST-6 cases where the combined influence of satellite data and model resolution are at a maximum at sea level, the relative contributions of increased resolution in the data assimilation and in the forecast models were evaluated. F model forecasts were generated from the C model SAT assimilation interpolated by the F grid, and C model forecasts were generated from the F model SAT assimilation interpolated to the C grid. These forecasts were then compared with the corresponding forecasts which had utilized the same grid resolution in the data assimilation and forecast models, CS and FS.

Atlas, R.↗