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At least 271 records · Page 15

NWEI AZURA Data for February 2018 Measured by MOIS (NREL)

Performance data (motion, power, mooring loads, position, heading, MOIS status) for the AZURA WEC operating at the WETS test site in Hawaii. These data are for the month of February 2018. Note that the WEC was deployed in mid February, so data begins at the beginning of the month. Channel descriptions are in the various data files Note: all files are in labview national instrument TDMS format. An excel plug in is available at the National Instruments website.

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NWEI AZURA Data for March 2018 Measured by MOIS (NREL)

Performance data (motion, power, mooring loads, position, heading, MOIS status) for the AZURA WEC operating at the WETS test site in Hawaii. These data are for the month of March 2018. Channel descriptions are in the various data files Note: all files are in labview national instrument TDMS format. An excel plug in is available at the National Instruments website.

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NWEI AZURA Data for April 2018 Measured by MOIS (NREL)

Performance data (motion, power, mooring loads, position, heading, MOIS status) for the AZURA WEC operating at the WETS test site in Hawaii. These data are for the month of April 2018. Channel descriptions are in the various data files Note: all files are in labview national instrument TDMS format. An excel plug in is available at the National Instruments website.

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Leaf mass per area and leaf water content measurements from field survey in association with NEON AOP survey, East River, CO 2018

Leaf area, wet, and dry weights for leaf samples from sites where field sampling was conducted during the 2018 National Ecological Observatory Network (NEON) Airborne Observation Platform (AOP) imaging spectroscopy and lidar surveys in Gunnison County, Colorado. The sampling sites were located across East River, Washington Gulch, Slate River, and Coal Creek watersheds and contained a mixture of meadow, shrub, and tree sampling sites. This data package contains the leaf area and wet and dry weights for leaves from tree and shrub sampling sites, as well as samples for meadow species present within a given sampling area. Associated data packages contain species composition information at the plot level (DOI: 10.15485/1618130), as well as additional biogeochemical, microbial, and geophysical data as they become available. For full documentation, please see associated reference.This package contains zipped folders of all scans that were used for area calculations for both sampling sites (tree/shrub, site_scans.zip) as well as representative samples from a daily sampling area of meadow species that were found in the 1 m plots (meadow_area_scans.zip). It also contains the macro code that was used in ImageJ for processing of the area calculations. Finally, it includes excel files with the area (cm2), wet weight (g), dry weight (g), leaf mass per area (LMA, g/m2), and leaf water content (%) for each set of scans.

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NEON AOP foliar trait maps, maps of model uncertainty estimates, and conifer map, East River, CO 2018

This data package contains mapped trait estimates and their uncertainties, and conifer map, for the National Ecological Observatory Network's Airborne Observation Platform survey data acquired over the Upper East River, Colorado in 2018. For full details, please see associated reference. in brief, trait models were developed independently for needle and non-needle leaf species using partial least squares regression (PLSR) using ground data from additional datasets: doi:10.15485/1618130, doi:10.15485/1618132, and doi:10.15485/1631278, merged with extracted spectral data from doi:10.15485/1618131. We separated vegetated pixels into needle and non-needle classes in order to generate a classification map based on the spectral differences between these leaf types (conifer.tif). We trained a deep learning model with custom architecture, detailed in Chadwick et al. In Press. The model performed with 0.998 true positive rate and 0.982 true negative rate, with ‘positives’ being non-needle identification. We then utilized PLSR to generate models of foliar traits for each leaf type. So that we could also map uncertainty in these predictions, we generated ten different models for needle and non-needle leaf species using different testing holdout sets of discrete sites. Each of these models was developed with a 100-fold cross validation procedure that utilized a 70% training set and 30% validation set with each fold, and then assessed based on the 10% of testing sites that were not included in that model’s development. The mean predicted value across the 10 models is used for the trait estimate in each pixel across the study area. The models are applied according to the leaf type designation in the conifer.tif map. The errors are the standard deviation across the 10 different models developed, with high error suggesting instability in model prediction and areas where values may not be reliable for ecological inference. These maps are only applied to areas with a NDVI > 0.5 to exclude non-vegetated areas. Shade masks could be applied to these data (doi:10.15485/1618131), but have not been for this data package. These data are also available on Google Earth Engine: https://code.earthengine.google.com/?asset=users/kdc/ER_NEON

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Site-level Foliar C, N, delta13C data from samples collected during field survey associated with NEON AOP survey, East River, CO 2018

Carbon (C) and nitrogen (N) weight percent concentrations were obtained from the bulk foliar samples collected across East River, Washington Gulch, Slate River, and Coal Creek watersheds in Gunnison, Colorado during the summer of 2018. These samples were collected from sun-lit leaves of meadow, shrub, and tree vegetation types within 72 hours of the National Ecological Observatory Network Airborne Observation Platform (NEON AOP) hyperspectral survey. These samples were dried and then run on an elemental analyzer coupled to a mass spectrometer for C and N concentrations and delta13C. The intention of these data were to provide ground truth data to develop foliar nutrient models across the imaging spectroscopy domain. Additional associated site metadata and vegetation fractional cover information can be found in the associated data releases (DOI: 10.15485/1618130). Here we provide site level C, N, and delta 13C data in the CN_Results_Foliar.csv. All of these samples were also registered with IGSN codes, and the details from that registration with metadata for the samples is included in foliar_sample_igsn_metadata.csv.

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Method used in Tokunaga, T. et al. 2018 for simulating time- and depth- dependent temperature variations in soil and sediment in Rifle, Colorado, 2013-2016.

This data package contains temperature, moisture content, matric potential, and carbon dioxide (CO2) concentration data from the Rifle, Colorado field site and from a 2 meter tall laboratory soil/sediment column designed to simulate field conditions. In addition, redox potential data from the laboratory column are included. The purpose of the data and paper is to demonstrate how a laboratory column was constructed to reproduce the dynamics of nonisothermal conditions in the field, such that CO2 production above a variable-depth water table can be studied in the laboratory. The data package contains 3 data files corresponding to the figures in the related paper (Tokunaga, T. et al. 2018) and 1 README file with the paper information.

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Aspen ploidy level and cover maps from NEON Airborne Observation Platform, 2018, Crested Butte, Colorado

Maps of aspen ploidy (diploid or triploid) developed using National Ecological Observatory Network (NEON) Airborne Observation Platform visible to shortwave infrared imaging spectroscopy data that were acquired over the Upper East River, Colorado in 2018. Maps of aspen distribution, as well as other land cover types that were used to screen for aspen dominated pixels are also provided. Each image file is provided as a GeoTiff with internal tiling and LZW compression. For use of ploidy maps, it is necessary to mask out non-aspen and shaded pixels. Shaded pixels are provided in an associated data package. For full details, please see associated publication and methods description. This dataset is associated with the publication in Ecological Applications.

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Blodgett Forest CA Warming Experiment phospholipid fatty acid and branched glycerol dialkyl glycerol tetraethers data 2018 from: "Whole-soil warming decreases abundance and modifies the community structure of microorganisms in the subsoil but not in surface soil".

This data package contains phospholipid fatty acid and branched glycerol dialkyl glycerol tetraethers data used for the paper: “Whole-soil warming decreases abundance and modifies the community structure of microorganisms in the subsoil but not in surface soil”. SOIL, https://doi.org/10.5194/soil-2021-14.On April 2018 (after 4.5 years of warming), we collected soil cores down to 90 cm depth from the whole soil profile warming experiment at the University of California Blodgett Forest Research Station, in the Sierra Nevada foothills near Georgetown, CA at 1370 m above sea level. Cores were collected from 6 experimental plots (three replicated blocks); samples were collected in 10 cm increments from 0 to 90 cm depth.This data package includes a file in .csv format and a file in .xlsx format, which can be accessed and processed using MS Excel or R. Phospholipid fatty acid and branched glycerol dialkyl glycerol tetraethers concentrations are provided as processed data files.

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2018 Meander C floodplain groundwater chemistry from the East River Watershed, Colorado

This dataset includes groundwater geochemistry data from floodplain piezometers collected as a part of the Watershed Function Scientific Focus Area (SFA) located in the Upper Colorado River Basin. The data were collected in order to investigate the role of hyporheic exchange and other river corridor processes on riverine export of solutes. Floodplain piezometers installed along two transects across Meander C in the Pumphouse vicinity (MCP and MCB wells) were sampled on daily to weekly time scales during summer-fall 2018. Some river water grab samples are also included. Data includes in-field measurements (pH, electrical conductivity [EC], oxidation reduction potential [ORP], dissolved oxygen [DO], Fe(II), and groundwater level) along with laboratory measurements (dissolved inorganic carbon [DIC], dissolved organic carbon [DOC], metals and major cations, anions [chloride, sulfate, nitrate], and dissolved ammonium). Five files are included in this dataset, including: sample locations and depths in both a kmz file which can be opened in Google Earth and a csv file, sampling protocol as a pdf document, aqueous geochemistry data in a csv file, and analytical detection limits in a csv file.

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2018 Meander Y and Meander Z floodplain groundwater chemistry from the East River watershed, Colorado

This dataset includes groundwater geochemistry data from floodplain piezometers collected as a part of the Watershed Function Scientific Focus Area (SFA) located in the Upper Colorado River Basin. The data were collected in order to investigate the role of hyporheic exchange and other river corridor processes on riverine export of solutes. Floodplain piezometers installed in Meander Z (MZA, MZB wells) and Meander Y (MYP wells) just upstream of the confluence with Brush Creek were sampled on daily to weekly time scales during summer-fall 2018. Some river water grab samples are also included. Data includes in-field measurements (pH, electrical conductivity [EC], oxidation reduction potential [ORP], and groundwater level) along with laboratory measurements (dissolved inorganic carbon [DIC], dissolved organic carbon [DOC], metals and major cations, anions [chloride, sulfate, nitrate], and dissolved ammonium). Five files are included in this dataset, including: sample locations and depths in both a kmz file which can be opened in Google Earth and a csv file, sampling protocol as a pdf document, aqueous geochemistry data in a csv file, and analytical detection limits in a csv file.

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Chemistry data from soils and soil incubation experiments from the whole-soil warming experiment at Blodgett Forest, CA, 2018, from: “Metabolic capabilities mute positive response to direct and indirect impacts of warming throughout the soil profile”

This dataset contains soil chemistry data of soils from the whole-soil warming experiment at Blodgett Forest in June 2018, and from laboratory incubation experiments conducted with a subset of those soils. Soil samples were collected at five different depths down to 80 cm from soil plots continuously heated by 4°C above ambient temperature for 4.5 years, and from the respective unheated control plots. Incubation experiments were conducted for 28 days with soils collected between 10-30 cm (“surface soils”) and 60-80 cm (“subsoils”) from heated and unheated field plots, amended in the laboratory with cellobiose (C, carbon amendment), or cellobiose plus ammonium and phosphate (CNP, combined carbon, nitrogen and phosphorus amendment). The dataset includes separate files for: (i) total carbon and nitrogen concentrations of initial field soils; (ii) carbon dioxide efflux rates at multiple times throughout the incubation experiments, and respective cumulative carbon dioxide efflux rates, as well as inorganic nitrogen concentrations at the beginning and end of the incubations, and net nitrogen mineralization rates and carbon use efficiency calculated at the end of the incubation. Analysis of these data has been published in Dove et al., (2021), “Metabolic capabilities mute positive response to direct and indirect impacts of warming throughout the soil profile. Nat. Commun. 12:2089”, https://doi.org/10.1038/s41467-021-22408-5. This research was performed as part of the TES Belowground Biogeochemistry SFA project at Lawrence Berkeley National Laboratory.

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Bulk density, grain size, carbon content and isotopes, and nitrogen content of floodplain sediment along the Koyukuk River, Alaska collected in Summer 2018.

The dataset is comprised of grain size, bulk density, carbon and nitrogen content, stable carbon isotopes, and radiocarbon content of soils sampled on the floodplain of the Koyukuk River near Huslia, AK. This dataset was collected to characterize sediment properties and floodplain organic carbon stocks in the discontinuous permafrost floodplain of the Koyukuk River. The data help quantify the flux and storage of sediment and carbon between the Koyukuk River and the surrounding floodplain as the river migrates laterally. The samples were collected in June 27 - July 9, 2018. The soil samples come from a total of 24 locations and were sampled in the upper 490 cm of the river cutbanks, point bars, and floodplain. Samples were analyzed for bulk density, full particle size distribution, nitrogen content and carbon content and isotopes, though not all samples were included in each analysis. An additional 10 samples of floodplain woody debris were measured for radiocarbon content. Data, detailed methods, analyses, and interpretations were previously published at: Douglas, M. M., Lingappa, U. F., Lamb, M. P., Rowland, J. C., West, A. J., Li, G., et al. (2021). Impact of river channel lateral migration on microbial communities across a discontinuous permafrost floodplain. Applied and Environmental Microbiology, 87(20), AEM.01339-21. https://doi.org/10.1128/AEM.01339-21 Douglas, M. M., Li, G. K., Fischer, W. W., Rowland, J. C., Kemeny, P. C., West, A. J., et al. (2022). Organic carbon burial by river meandering partially offsets bank erosion carbon fluxes in a discontinuous permafrost floodplain. Earth Surface Dynamics, 10(3), 421–435. https://doi.org/10.5194/esurf-10-421-2022 The dataset is comprised of a total of three separate data files based on the sample type and analysis, including a file that lists the sample locations, permafrost presence, and geomorphic landform.

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Benzene polycarboxylic acids, lignin and hydrolysable lipids data from the whole-soil warming experiment at Blodgett Forest, CA, 2018, from: "Rapid loss of complex polymers and pyrogenic carbon in subsoils under whole soil warming"

This data package contains benzene polycarboxylic acids, lignin and hydrolysable lipids data used for the paper: “Rapid loss of subsoil plant-derived polymers and pyrogenic carbon with whole-soil warming”.On April 2018 (after 4.5 years of warming), we collected soil cores down to 90 cm depth from the whole soil profile warming experiment at the University of California Blodgett Forest Research Station, in the Sierra Nevada foothills near Georgetown, CA at 1370 m above sea level. Cores were collected from 6 experimental plots (three replicated blocks); samples were collected in 10 cm increments from 0 to 90 cm depth. This data package includes a file in .csv format and a file in .xlsx format, which can be accessed and processed using MS Excel or R. Benzene polycarboxylic acid, lignin and hydrolysable lipid concentrations are provided as processed data files.The aim of the measurements was to assess how +4°C of whole-soil warming for 4.5 years will affect structurally complex polymeric compounds at different soil depths. The research was supported by Swiss National Science Foundation (SNF) project 172744 (DEEP C) and U.S. Department of Energy, Office of Science, Office of Biological and Environmental Research under contract number DE-AC02-05CH11231.

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Riverbank temperatures on the Selawik River, Alaska 2010-2012, and Koyukuk River, Alaska June to July 2018.

The data package includes temperature measurements from riverbanks along the Selawik and Koyukuk Rivers in northwest Alaska. The Selawik River data also includes meteorological data collected locally and the Koyukuk River includes bulk density and ice content data from the riverbanks. The Selawik River data was collected between 2010 and 2013 with meteorological data collected for the entire time period and riverbank temperatures collected in shorter time intervals between 2010 to 2012. All of the Selawik River data were collected a single river bend. The Koyukuk River temperature data was collected from late June to early July 2018 at a total of five locations on three riverbanks. Ice content measurements on the Koyukuk were made at five riverbank locations. The data collection on both rivers was done in support of studies on the influence of permafrost on riverbank erosion. The temperature data was collected to monitor the thermal conditions of the river banks both seasonally and during periods of erosion. The ice content of the banks was measured to better understand how bank erosion rates are influenced by ice in the frozen riverbanks.

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Soil water content, matric potential, carbon dioxide and oxygen concentrations, Oct 2018-Dec 2021, Slate River Floodplain, Crested Butte, Colorado

This data package includes a time series of soil sensor data (temperature, water content, bulk electrical conductivity, porewater dissolved oxygen and porewater dissolved carbon dioxide) in a vertical profile from the Slate River floodplain outside Crested Butte, Colorado, a focus field site for the SLAC Floodplain Hydro-Biogeochemistry SFA. The data was generated as part of the work targeting the overarching research question for the SLAC SFA: How do ubiquitous subsurface interfaces mediate molecular-scale biogeochemical processes and groundwater quality in floodplains and watersheds? The package includes: (1) soil temperature, volumetric water content and electrical conductivity at 40, 60 and 82.5 cm depth; (2) soil matric potential at 40, 60, 79 and 100 cm depth; (3) soil CO2 concentrations at 40, 60 and 82.5 cm depth; and (4) soil oxygen concentrations at 60, 82.5, 100, 135, 170 and 182 cm depth. Both the carbon dioxide and oxygen sensors are optical sensors that can measure the partial pressure of oxygen in both saturated and unsaturated conditions. Unfortunately, soil CO2 in the profile is unexpectedly high and above the sensor calibration range (0-25,000 ppm). In addition, soil CO2 sensors failed within a year of deployment, so we only report CO2 data from 2019-2020.Within the data package, "FLMD.csv" describes file-level metadata and "dd.csv" defines column headers and universal terms across the dataset. The data package includes 4 "*data.csv" files, one for each calendar year in the dataset. Each "*data.csv" file has a corresponding "*_InstallationMethods.csv" file that describes the location, sensor model, sensor serial number and other metadata corresponding for each measured parameter. Because sensors have been added over time, not every sensor has data dating back to Oct 2018. Note that there is a data gap over winter 2019-2020 due to a power outage. While this repository currently only contains data through December 2021, the dataset will be updated as additional years are collected and processed.

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Vegetation Warming Experiment: Leaf Mass Area, Leaf Carbon and Nitrogen Content, Utqiagvik (Barrow), Alaska, 2018

Leaf mass per area (LMA), leaf carbon and nitrogen content of vegetation (Arctagrostis latifolia, Petasites frigidus) within warming chambers and paired control plots. Samples include gas exchange measurement leaves and an end of season bulk harvest. The files included in this data package are in .csv format, and include 2 data files and 4 metadata files. See related datasets for plant physiology, phenology and environmental conditions of these samples. These data were collected in 2018 as part of a series of single-season warming experiments on tundra vegetation on the Barrow Environmental Observatory (BEO), Utqiagvik, Alaska. A different plant species was targeted each year, over four experimental years from 2017–2021. Each year, five warming chambers and paired ambient control plots were deployed from around the time of snowmelt in mid-June through to mid-September. Average seasonal warming of 3–4°C was achieved using Zero Power Warming (ZPW) chambers (Lewin et al, 2017).The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

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