Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “time migration”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 253 records · Page 14

TGF-β1 induced fascin1 expression facilitates the migration and invasion of kidney carcinoma cells through ERK and JNK signaling pathways

Highlights: • In 769-P and OSRC cell lines, TGF-β1 can increase the expression of fascin1. • TGF-β1 promoted the invasive and migratory capabilities of the two cell lines via increased the expression of fascin1. • TGF-β1 induced fascin1 expression through ERK and JNK signal pathways. Transforming growth factor-β1 (TGF-β1) plays a crucial role in the signaling network that controls cellular invasion and motility capability during tumor development. To investigate whether fascin1 plays a crucial role in TGF-β1-facilitated invasion and migration of kidney cancer cells (KCC), real-time PCR and western blotting were used to test the fascin1 expression after TGF-β1 treatment (10 ng/ml) in 769-P and OSRC cells. Fascin1 was silenced using the small interfering RNA (siRNA) technique. Cytoskeleton staining was used to test the change of Cytoskeleton. Cell migration and invasion changes were measured by wound-healing and Transwell assay. The results indicate that mRNA and protein levels of fascin1 were dramatically increased after treatment with 10 ng/ml TGF-β1 in 769-P and OSRC cells. TGF-β1 promoted the occurrence of EMT (Epithelial-Mesenchymal Transition) and the invasive and migratory capabilities of the two cell lines after treatment with 10 ng/ml TGF-β1. In addition, fascin1 siRNA dramatically attenuated the invasiveness and migration induced by TGF-β1. Furthermore, we identified that specific inhibitors of ERK and JNK signaling pathways, FR180204 and SP600125, can suppress TGF-β1-induced fascin1 expression. In conclusion, these results reveal that fascin1 is an important mediator of TGF-β1-induced invasion and migration of KCC through ERK and JNK signal pathways.

60 APPLIED LIFE SCIENCES↗

Extended live-tracking and quantitative characterization of wound healing and cell migration with SiR-Hoechst

Highlights: • SiR-Hoechst is a nuclear dye that enables cell tracking without affecting migration. • Single cell analysis provides multiple migration metrics during wound healing. • Cell density-based report of wound healing is less susceptible to subjective bias. • Cell directionality is an important contributor of early wound recovery. Cell migration is essential to many life processes, including immune response, tissue repair, and cancer progression. A reliable quantitative characterization of the cell migration can therefore aid in the high throughput screening of drug efficacy in wound healing and cancer treatments. In this work, we report what we believe is the first use of SiR-Hoechst for extended live tracking and automated analysis of cell migration and wound healing. We showed through rigorous statistical comparisons that this far-red label does not affect migratory behavior. We observed excellent automated tracking of random cell migration, in which the motility parameters (speed, displacement, path length, directionality ratio, persistence time, and direction autocorrelation) obtained closely match those obtained from manual tracking. We also present an analysis framework to characterize the healing of a scratch wound from the perspective of single cells. The use of SiR-Hoechst is advantageous for the crowded environments in wound healing assays because as long as cell nuclei do not overlap, continuous tracking can be maintained even if there is cell-cell contact. In this paper, we report wound recovery based on the number of cells migrating into the wound over time, normalized by the initial cell count prior to the infliction of the wound. This normalized cell count approach is impervious to operator bias during the arbitration of wound edges and is also robust against variability that arises due to differences in the cell density of different samples. Additional wound healing characteristics were also defined based on the evolution of cell speed and directionality during healing. Not unexpected, the wound healing cells exhibited much higher tendency to maintain the same migratory direction in comparison to the randomly migrating cells. The use of SiR-Hoechst thus greatly simplified the automation of single cell and whole population analysis with high spatial and temporal resolution over extended periods of time.

60 APPLIED LIFE SCIENCES↗

Efficient U(VI) Reduction and Sequestration by Ti 2 CT x MXene

Although reduction of highly mobile U(VI) to less soluble U(IV) has been long considered an effective approach to in situ environmental remediation of uranium, candidate reducing agents are largely limited to Fe-based materials and microbials. The importance of titanium-containing compounds in natural uranium ore deposits suggests a role for titanium in uranium migration. In this report, for the first time, a two-dimensional transition metal carbide, Ti 2 CT x , is shown to efficiently remove uranium via a sorption-reduction strategy. Batch experiments demonstrate that Ti 2 CT x exhibits excellent U(VI) removal over a wide pH range, with an uptake capacity of 470 mg g –1 at pH 3.0. The mechanism for U(VI) to U(IV) reduction by Ti 2 CT x was deciphered by X-ray absorption spectroscopy and diffraction and photoelectron spectroscopy. The reduced U(IV) species at low pH is identified as mononuclear with bidendate binding to the MXene substrate. At near-neutral pH, nanoparticles of the UO 2+x phase adsorb to the substrate with some Ti 2 CT x transformed to amorphous TiO 2 . A subsequent in-depth study suggests Ti 2 CT x materials may be potential candidates for permeable reactive barriers in the treatment of wastewaters from uranium mining. Finally, this work highlights reduction-induced immobilization of U(VI) by Ti 2 CT x MXene including a pH-dependent reduction mechanism that might promote applications of titanium-based materials in the elimination of other oxidized contaminants.

36 MATERIALS SCIENCE↗

Integration of seismic-pressure-petrophysics inversion of continuous active-seismic monitoring data for monitoring and quantifying CO 2 plume (Final Report)

The overall objective of this project is to develop and validate an integrated package of joint seismic-pressure-petrophysics inversion (jSPPI) of continuous active-source seismic monitoring dataset capable of providing real-time monitoring of CO 2 plume during geologic carbon sequestration (GCS). The three specific developments include: (a) the methodologies for fast seismic full waveform inversion of continuous active source seismic monitoring, (CASSM) datasets for simultaneously estimating velocity and attenuation, and with data assimilation; (b) joint Bayesian petrophysical inversion of seismic models and pressure data for providing and updating CO 2 saturation models; (c) the methods using multiple datasets including (Crainfield and Frio-II borehole) synthetic, laboratory, and field CASSM datasets. The outcomes of jSPPI include (a) a workflow for processing CASSM data, (b) Bayesian inversion algorithms using CASSM data and pressure response data, and (c) integration with data assimilation algorithms for continuously updating site-specific models used for prediction and reservoir management. The validation of joint FWI will be conducted using synthetic models based on the Cranfield and Frio experiments as well as field CASSM datasets collected as part of the Frio-II pilot injection. To quantify and map the mass and distribution of CO 2 (saturation), we will jointly invert velocity and attenuation measurements from the FWI with a Bayesian approach using a rock physics model for attenuation (e.g., White’s attenuation model with two selected patch sizes (White, 1976; Dutta and Seriff, 1979)). The Bayesian inversion will be applied to each time step in the CASSM survey in an updating scheme, which integrates with an ensemble of reservoir simulations at each step. A more complete experimental validation dataset will be collected as part of a mesoscale (2-3 m) gas-CO 2 injection experiment utilizing a higher frequency version of the CASSM system developed for laboratory studies; the integrated inversion will be demonstrated using this dataset which will provide both a dense geometry as well as more precise secondary confirmation measurements (e.g. saturation) typically not available in the field. The resulting real-time map of CO 2 saturation is able to provide a deeper scientific understanding of the complex, time-varying dynamics of subsurface fluid flow migration path as well as the rapid detection of CO 2 leakage hazards.

25 ENERGY STORAGE↗

BREEDING SUPER-EARTHS AND BIRTHING SUPER-PUFFS IN TRANSITIONAL DISKS

The riddle posed by super-Earths (1–4R{sub ⊕}, 2–20M{sub ⊕}) is that they are not Jupiters: their core masses are large enough to trigger runaway gas accretion, yet somehow super-Earths accreted atmospheres that weigh only a few percent of their total mass. We show that this puzzle is solved if super-Earths formed late, as the last vestiges of their parent gas disks were about to clear. This scenario would seem to present fine-tuning problems, but we show that there are none. Ambient gas densities can span many (in one case up to 9) orders of magnitude, and super-Earths can still robustly emerge after ∼0.1–1 Myr with percent-by-weight atmospheres. Super-Earth cores are naturally bred in gas-poor environments where gas dynamical friction has weakened sufficiently to allow constituent protocores to gravitationally stir one another and merge. So little gas is present at the time of core assembly that cores hardly migrate by disk torques: formation of super-Earths can be in situ. The basic picture—that close-in super-Earths form in a gas-poor (but not gas-empty) inner disk, fed continuously by gas that bleeds inward from a more massive outer disk—recalls the largely evacuated but still accreting inner cavities of transitional protoplanetary disks. We also address the inverse problem presented by super-puffs: an uncommon class of short-period planets seemingly too voluminous for their small masses (4–10R{sub ⊕}, 2–6M{sub ⊕}). Super-puffs most easily acquire their thick atmospheres as dust-free, rapidly cooling worlds outside ∼1 AU where nebular gas is colder, less dense, and therefore less opaque. Unlike super-Earths, which can form in situ, super-puffs probably migrated in to their current orbits; they are expected to form the outer links of mean-motion resonant chains, and to exhibit greater water content. We close by confronting observations and itemizing remaining questions.

79 ASTRONOMY AND ASTROPHYSICS↗

Modeling of thin film GaAs growth

A potential scaling Monte Carlo model of crystal growth is developed. The model is a modification of the solid-on-solid method for studying crystal growth in that potentials at surface sites are continuously updated on a time scale reflecting the surface events of migration, incorporation and evaporation. The model allows for B on A type of crystal growth and lattice disregistry by the assignment of potential values at various surface sites. The surface adatoms are periodically assigned a random energy from a Boltzmann distribution and this energy determines whether the adatoms evaporate, migrate or remain stationary during the sampling interval. For each addition or migration of an adatom, the surface potentials are adjusted to reflect the adsorption, migration or desorption potential changes.

Heinbockel, J. H.↗

High-power low-threshold graded-index separate confinement heterostructure AlGaAs single quantum well lasers on Si substrates

A high-power low-threshold graded-index separate confinement heterostructure AlGaAs single quantum well laser on Si substrates has been demonstrated for the first time by a hybrid growth of migration-enhanced molecular beam epitaxy followed by metalorganic vapor phase epitaxy. The quantum well laser showed an output power of more than 400 mW per facet under pulsed conditions. A room-temperature threshold current of 300 mA was obtained with a differential quantum efficiency of 40 percent without facet coating. The threshold current density was 550 A/sq cm for a cavity length of 500 microns. These results show the highest peak power reported to date for low-threshold lasers on Si substrates. The full width at half maximum of the far-field pattern parallel to the junction was 6 deg. Threshold current densities as low as 250 A/sq cm were obtained for lasers on GaAs substrates.

Kim, Jae-Hoon↗

The Distribution of Water in a Viscous Protoplanetary Disk

The distribution of water in the solar nebula is important to understand for a number of reasons. Firstly, in the inner regions of the solar nebula, the concentration of water vapor is expected to have played a major role in determining its oxidation state, and therefore would control which minerals would form there. Secondly, in the outer nebula, water would be a major condensable, making up nearly 50% of the mass of the solids and thus possibly playing a role in determining where giant planets formed. Lastly, liquid water is important for forming and sustaining life, and therefore understanding where and how water was transported to the habitable zone of a a star is critical to understanding how common life may be in the galaxy. Because of its importance, the distribution of water in the solar nebula has been studied by a number of authors. The main transport mechanisms which would determine the distribution of water would be diffusion and gas drag migration. Water vapor and small solids would diffuse in the nebula, moving away from areas of high concentrations. Larger bodies, while also subject to diffusion, though to a lesser extent, would experience gas drag migration, causing them to move inwards with time. The bodies most affected by this transport mechanism would be on the order of 1 meter in size. As objects continued to grow larger, their inertia would also grow, making them nearly immobile to gas drag. While efforts have been made to understand how water would be distributed in a protoplanetary disk, none of the published models simultaneously consider the effects of nebular evolution, transport of material throughout the nebula, and the existence of solids of various sizes at a given location of the nebula. We are currently developing a model which allows for these effects and is consistent with models for the accretion of bodies in the solar nebula.

Ciesla, F. J.↗

Model of Semidiurnal Pseudo Tide in the High-Latitude Upper Mesosphere

We present numerical results for the m = 1 meridional winds of semi diurnal oscillations in the high-latitude upper mesosphere, which are generated in the Numerical Spectral Model (NSM) without solar excitations of the tides. Identified with heuristic computer runs, the pseudo tides attain amplitudes that are, at times, as large as the non-migrating tides produced with standard solar forcing. Under the influence of parameterized gravity waves, the nonlinear NSM generates internal oscillations like the quasi-biennial oscillation, that are produced with periods favored by the dynamical properties of the system. The Coriolis force would favor at polar latitudes the excitation of the 12-hour periodicity. This oscillation may help explain the large non-migrating semidiurnal tides that are observed in the region with ground-based and satellite measurements.

Talaat, E. R.↗

Processing NASA Earth Science Data on Nebula Cloud

Three applications were successfully migrated to Nebula, including S4PM, AIRS L1/L2 algorithms, and Giovanni MAPSS. Nebula has some advantages compared with local machines (e.g. performance, cost, scalability, bundling, etc.). Nebula still faces some challenges (e.g. stability, object storage, networking, etc.). Migrating applications to Nebula is feasible but time consuming. Lessons learned from our Nebula experience will benefit future Cloud Computing efforts at GES DISC.

Chen, Aijun↗

Secure Network-Centric Aviation Communication (SNAC)

The existing National Airspace System (NAS) communications capabilities are largely unsecured, are not designed for efficient use of spectrum and collectively are not capable of servicing the future needs of the NAS with the inclusion of new operators in Unmanned Aviation Systems (UAS) or On Demand Mobility (ODM). SNAC will provide a ubiquitous secure, network-based communications architecture that will provide new service capabilities and allow for the migration of current communications to SNAC over time. The necessary change in communication technologies to digital domains will allow for the adoption of security mechanisms, sharing of link technologies, large increase in spectrum utilization, new forms of resilience and redundancy and the possibly of spectrum reuse. SNAC consists of a long term open architectural approach with increasingly capable designs used to steer research and development and enable operating capabilities that run in parallel with current NAS systems.

Communications↗

Distributed Fiber Optic Arrays: Integrated Temperature and Seismic Sensing for Detection of CO 2 Flow, Leakage and Subsurface Distribution (Final Report)

This report describes the seismic and heat-pulse monitoring equipment, surveys, results and accomplishments of the fiber optic (FO) project funded by the U.S. Department of Energy (DOE) under Agreement Number DE-FE0012700. The formal title of the project is “Distributed Fiber Optic Arrays: Integrated Temperature and Seismic Sensing for Detection of CO 2 Flow, Leakage and Subsurface Distribution.” The project focuses on the field acquisition of FO data using Distributed Acoustic Sensing (DAS) arrays for subsurface imaging of geologic structure and to track the CO 2 migration in the injection interval using time-lapse techniques. A second component of the project uses a novel heat-pulse monitoring method that relies on Distributed Temperature Sensing (DTS) to evaluate near-field leakage of CO 2 or brine in and around the wellbore. The Southeast Regional Carbon Sequestration (SECARB) partnership hosted the project at the Anthropogenic Test site near Citronelle, Alabama after the original site host, the Kansas Geological Survey (KGS), experienced significant delays in permitting its CO 2 injection well at the Wellington Oil Field site in Kansas. The KGS project was later terminated in 2017 before an injection permit issued. A second field trial was planned for the Livingston Oil Field, located in Louisiana, but the site host ran into financial troubles and the project was terminated in 2015. A replacement field-site host was not found for the Livingston field trial. Both the Wellington, Kansas and Livingston, Louisiana projects were funded by DOE. A novel sensor platform referred to as the Modular Borehole Monitoring (MBM) system deployed at the Citronelle field site was utilized by the FO project. Two different seismic sensor technologies were incorporated in the Citronelle MBM system design including: (1) a semi-permanent, tubing-deployed, 18-level geophone array with custom hydraulic clamps; and (2) two, single mode optical fibers for Distributed Acoustic Sensing (DAS). Incorporation of the 18-level geophone array in the MBM system provided an ideal opportunity to compare the DAS response to conventional geophones. A heat-pulse monitoring system consisting of two, multi-mode optical fibers for Distributed Temperature Sensing (DTS) and copper heater element were also incorporated into the MBM package. This report provides an overview of the design of the MBM, DAS, and DTS equipment and the surveys performed during the study. The heat-pulse monitoring technique was used to diagnose a completion problem with observation well D-9-8 #2 where the MBM system was installed in 2012, thus successfully demonstrating its application for leak detection. In 2015, CO 2 unexpectedly arrived at the observation well approximately one year after CO 2 injection and heat-pulse monitoring ended. It was determined at this time that saltwater intrusion had likely penetrated the stainless-steel capillary tube containing the fibers and copper heater elements, thus preventing the heater from being used. DTS measurements indicated that the fiber had also degraded probably due to hydrogen darkening. It is recommended that the capillary tube be constructed of a more corrosive resistant material (e.g., Inconel) in the future should it be deployed in similar harsh downhole environments. Geophysical imaging of the subsurface and monitoring of the CO 2 were successful using DAS in the vertical seismic profile (VSP) survey configuration. A high resolution VSP image of the subsurface was obtained in 2014 using DAS, which exceeded our expectations in comparison to a lower resolution image obtained by SECARB in 2012 using an 80-level geophone array. A time-lapse image of the redistribution of CO 2 after injection ended in September 2014 was obtained using two DAS VSP surveys from June 2014 and December 2015, thus successfully demonstrating its application. DAS data were also acquired during a crosswell seismic survey conducted in 2014. Unfortunately, the DAS technique was not success in the crosswell survey configuration because the noise level was too high, increasing by a factor of ten, over the high frequency output (100-1,200) of the piezoelectric source.

58 GEOSCIENCES↗

Towards automated and real-time multi-object detection of anguilliform fishes from sonar data using YOLOv8 deep learning algorithm

Eels (Anguilla spp.), including American eels (Anguilla rostrata), European eels (Anguilla anguilla), and Japanese eels (Anguilla japonica), are species of critical management and regulatory concern due to their vulnerability to various stressors during downstream migrations. Accurate and efficient detection of migrating eels can improve our understanding of fish behaviors and fish-hydraulic structure interactions, thereby facilitating the design, operation, and optimization of more effective downstream passage facilities from both biological and economic perspectives. However, a real-time, automated framework for detecting migrating eels in real-world applications is currently lacking. Leveraging imaging sonar as a reliable technology for fish passage monitoring, field data are acquired using imaging sonar and then converted to single sonar frames/images for subsequent analysis. In this study, a framework based on the You Only Look Once Version 8 (YOLOv8)-based convolutional neural network is proposed for multi-object detection of eels and non-eel fish using the sonar images after image subtraction and additional wavelet denoising. The results from both training and testing phases demonstrate that the framework's ability can successfully detect both eels and non-eel fish in preprocessed sonar images, achieving F1-scores and mAP@0.50 exceeding 0.84. Additionally, the incorporation of wavelet denoising during preprocessing slightly improve detection performance. Furthermore, the transferability of this framework from eel to lamprey detection is demonstrated to be feasible given the similar morphological characteristics of these two species. Overall, the proposed framework achieves accurate and efficient detection of migrating eels, providing reliable and real-time information that can help conserve vulnerable eel and eel-like populations.

Deep learning↗

Laboratory Experiments on Bentonite Samples: FY16 Progress

The primary goal of this study is to improve the understanding of U(VI) sorption and diffusion behavior in sodium-montmorillonite in order to support the development of realistic conceptual models describing these processes in performance assessment models while (1) accounting for potential changes in system conditions over time and space, (2) avoiding overly conservative transport predictions, and (3) using a minimum number of fitting parameters.

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

Twist1-positive epithelial cells retain adhesive and proliferative capacity throughout dissemination

Dissemination is the process by which cells detach and migrate away from a multicellular tissue. The epithelial-to-mesenchymal transition (EMT) conceptualizes dissemination in a stepwise fashion, with downregulation of E-cadherin leading to loss of intercellular junctions, induction of motility, and then escape from the epithelium. This gain of migratory activity is proposed to be mutually exclusive with proliferation. We previously developed a dissemination assay based on inducible expression of the transcription factor Twist1 and here utilize it to characterize the timing and dynamics of intercellular adhesion, proliferation and migration during dissemination. Surprisingly, Twist1+ epithelium displayed extensive intercellular junctions, and Twist1– luminal epithelial cells could still adhere to disseminating Twist1+ cells. Although proteolysis and proliferation were both observed throughout dissemination, neither was absolutely required. Finally, Twist1+ cells exhibited a hybrid migration mode; their morphology and nuclear deformation were characteristic of amoeboid cells, whereas their dynamic protrusive activity, pericellular proteolysis and migration speeds were more typical of mesenchymal cells. Our data reveal that epithelial cells can disseminate while retaining competence to adhere and proliferate.

Life Sciences & Biomedicine - Other Topics↗

Analysis of current-driven oscillatory dynamics of single-layer homoepitaxial islands on crystalline conducting substrates

Here we report results of a systematic study on the complex oscillatory current-driven dynamics of single-layer homoepitaxial islands on crystalline substrate surfaces and the dependence of this driven dynamical behavior on important physical parameters, including island size, substrate surface orientation, and direction of externally applied electric field. The analysis is based on a nonlinear model of driven island edge morphological evolution that accounts for curvature-driven edge diffusion, edge electromigration, and edge diffusional anisotropy. Using a linear theory of island edge morphological stability, we calculate a critical island size at which the island’s equilibrium edge shape becomes unstable, which sets a lower bound for the onset of time-periodic oscillatory dynamical response. Using direct dynamical simulations, we study the edge morphological dynamics of current-driven single-layer islands at larger-than-critical size, and determine the actual island size at which the migrating islands undergo a transition from steady to time-periodic asymptotic states through a subcritical Hopf bifurcation. At the highest symmetry of diffusional anisotropy examined, on {111} surfaces of face-centered cubic crystalline substrates, we find that more complex stable oscillatory states can be reached through period-doubling bifurcation at island sizes larger than those at the Hopf points. We characterize in detail the island morphology and dynamical response at the stable time-periodic asymptotic states, determine the range of stability of these oscillatory states terminated by island breakup, and explain the morphological features of the stable oscillating islands on the basis of linear stability theory.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Modeling ultrafast exciton migration within the electron donor domains of bulk heterojunction organic photovoltaics

Recent experimental studies revealed that charge carriers harvested by bulk heterojunction organic photovoltaics can be collected on ultrafast time scales. To investigate ultrafast exciton mobility, we construct simple, nonatomistic models of a common polymeric electron donor material. We first explore the relationship between the magnitude of energetic noise in the model Hamiltonian and the spatial extent of resulting eigenstates. We then employ a quantum master equation approach to simulate migration of chromophore-localized initial excited states. Excitons initially localized on a single chromophore at the center of the model delocalize down polymer chains and across pi-stacked chromophores through a coherent, wavelike mechanism during the first few tens of femtoseconds. We explore the dependence of this coherent delocalization on coupling strength and on the magnitude of energetic noise. At longer times we observe continued migration toward a uniform population distribution that proceeds through an incoherent, diffusive mechanism. A series of simulations modeling exciton harvesting in domains of varying size demonstrates that smaller domains enhance ultrafast exciton harvesting yield. Finally, our nonatomistic model falls short of quantitative accuracy but demonstrates that excitons are mobile within electron donor domains on ultrafast time scales and that coherent exciton transport can enhance ultrafast exciton harvesting.

36 MATERIALS SCIENCE↗