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At least 253 records · Page 14

Assessing Hurricane Katrina Vegetation Damage at Stennis Space Center using IKONOS Image Classification Techniques

Hurricane Katrina hit southwestern Mississippi on August 29, 2005, at 9:45 a.m. CDT as a category 3 storm with surges up to approx. 9 m and sustained winds of approx. 120 mph. The hurricane's wind, rain, and flooding devastated several coastal towns, from New Orleans through Mobile. The storm also caused significant damage to infrastructure and vegetation of NASA's SSC (Stennis Space Center). Storm recovery at SSC involved not only repairs of critical infrastructure but also forest damage mitigation (via timber harvests and control burns to reduce fire risk). This presentation discusses an effort to use commercially available high spatial resolution multispectral IKONOS data for vegetation damage assessment, based on data collected over SSC on September 2, 2005.

Spruce, Joseph P.↗

Evaluation of diffusion kurtosis and diffusivity from baseline staging MRI as predictive biomarkers for response to neoadjuvant chemoradiation in locally advanced rectal cancer

Purpose: To evaluate the role of diffusion kurtosis and diffusivity as potential imaging biomarkers to predict response to neoadjuvant chemoradiation therapy (CRT) from baseline staging magnetic resonance imaging (MRI) in locally advanced rectal cancer (LARC). Materials and methods: This retrospective study included 45 consecutive patients (31 male/14 female) who underwent baseline MRI with high b-value sequences (up to 1500 mm/s{sup 2}) for LARC followed by neoadjuvant chemoradiation and surgical resection. The mean age was 57.4 years (range 34.2–72.9). An abdominal radiologist using open source software manually segmented T2-weighted images. Segmentations were used to derive diffusion kurtosis and diffusivity from diffusion-weighted images as well as volumetric data. These data were analyzed with regard to tumor regression grade (TRG) using the four-tier American Joint Committee on Cancer (AJCC) classification, TRG 0–3. Proportional odds regression was used to analyze the four-level ordinal outcome. A sensitivity analysis was performed using univariable logistic regression for binary TRG groups, TRG 0/1 (> 90% response), or TRG 2/3 (< 90% response). p < 0.05 was considered significant throughout. Results: In the univariable proportional odds regression analysis, higher diffusivity summary (D{sub sum}) values were observed to be significantly associated with higher odds of being in one or more favorable TRG group (TRG 0 or 1). In other words, on average, patients with higher D{sub sum} values were more likely to be in a more favorable TRG group. These results are mostly consistent with the sensitivity analysis, in which higher values for most D{sub sum} values [all but region of interest (ROI)-max D median (p = 0.08)] were observed to be significantly associated with higher odds of being TRG 0 or 1. Tumor volume of interest (VOI) and ROI volume, ROI kurtosis mean and median, and VOI kurtosis mean and median were not significantly associated with TRG. Conclusion: Diffusivity derived from the baseline staging MRI, but not diffusion kurtosis or volumetric data, is associated with TRG and therefore shows promise as a potential imaging biomarker to predict the response to neoadjuvant chemotherapy in LARC. Clinical relevance statement: Diffusivity shows promise as a potential imaging biomarker to predict AJCC TRG following neoadjuvant CRT, which has implications for risk stratification. Patients with TRG 0/1 have 5-year disease-free survival (DFS) of 90–98%, as opposed to those who are TRG 2/3 with 5-year DFS of 68–73%.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

1 H NMR metabolomics study of spleen from C57BL/6 mice exposed to gamma radiation

Due to the potential risk of accidental exposure to gamma radiation, it’s critical to identify the biomarkers of radiation exposed creatures. In the present study, NMR based metabolomics combined with multivariate data analysis to evaluate the metabolites changed in the C57BL/6 mouse spleen after 4 days whole body exposure to 3.0 Gy and 7.8 Gy gamma radiations. Principal component analysis (PCA) and orthogonal projection to latent structures analysis (OPLS) are employed for classification and identification potential biomarkers associated with gamma irradiation. Two different strategies for NMR spectral data reduction (i.e., spectral binning and spectral deconvolution) are combined with normalize to constant sum and unit weight before multivariate data analysis, respectively. The combination of spectral deconvolution and normalization to unit weight is the best way for identifying discriminatory metabolites between the irradiation and control groups. Normalized to the constant sum may achieve some pseudo biomarkers. PCA and OPLS results shown that the exposed groups can be well separated from the control group. Leucine, 2-aminobutyrate, valine, lactate, arginine, glutathione, 2-oxoglutarate, creatine, tyrosine, phenylalanine, π-methylhistidine, taurine, myoinositol, glycerol and uracil are significantly elevated while ADP is decreased significantly. As a result, these significantly changed metabolites are associated with multiple metabolic pathways and may be potential biomarkers in the spleen exposed to gamma irradiation.

1H NMR metabolomics↗

Multi-Class Anomaly Detection in Flight Data using Semi-Supervised Explainable Deep Learning Model

Identifying precursor for safety incidents in aviation data is a crucial task, yet extremely challenging. The main approach, in practice, leverages domain expertise to define expected tolerances in system’s behavior and alarm exceedance from such safety margins. However, this approach is incapable of identifying unknown risk and vulnerabilities. Machine learning has been long studied and deployed to identify precursors for such anomalies, with the great challenge of the need for sufficient labelled set of data to achieve a reliable and accurate performance. In this article, we develop an explainable deep semi-supervised model for anomaly detection in aviation, building upon recent advancements in the machine learning literature. The proposed model combines feature engineering and classification in the feature space, while leveraging all available data (labelled and unlabeled). Validating on two case studies of anomaly detection in take-off and landing phases of commercial aircraft, we show that our model is able to outperform state-of-the-art supervised anomaly detection model and reach significantly high accuracy and low false alarm with minimum amount of available labelled data.

Anomaly Detection↗

Identifying Sociomarkers of Pediatric Asthma Patients at Risk of Hospital Revisiting

ObjectiveAsthma is one of the most common chronic childhood diseases in the United States [2, 3]. In addition to its pervasiveness, pediatric asthma shows high sensitivity to the environment. Combining medical-social dataset with machine learning methods we demonstrate how socio-markers play an important role in identifying patients at risk of hospital revisits due to pediatric asthma within a year.IntroductionA socio-marker is a measurable indicator of social conditions where a patient is embedded in and exposed to, being analogous with a biomarker indicating the severity or presence of some disease state. Social factors are one of the most clinical health determinants [1], which play a critical role in explaining health outcomes. Socio-markers can help medical practitioners and researchers to reliably identify high-risk individuals in a timely manner.MethodsWe collected data from three different sources: pediatric asthma encounter records from Jan 1st, 2016 to Dec 31st, 2016 at a children’s hospital, the 2010 U.S census data and neighborhood quality survey data by Memphis Property Hub. After merging these datasets we examine the effect of social features in identifying the patients who visited the hospital more than once during the observation period. We only use the first time visit (3,678 cases) to avoid over-counting of the same patients. In addition to demographic features (age, gender, insurance type, and race (African American and White)), we incorporate the social features such as the proportion of individuals living below the federal poverty level, blight prevalence, neighborhood quality, neighborhood quality inequality, trash dumping presence, the broken window pervasiveness within the zip code area of patients’ residence are included.We then implemented a Support Vector Machine (SVM) based classification model using abovementioned 11 social features. The classification outcome is either patient visits the hospital only one-time (class 0) or revisits the hospital within a year (class 1). Among 3,678 unique patients in the dataset, only 823 pediatric patients revisited hospital with asthma. So, to overcome the class imbalance issue, we have used 823 patients’ data (randomly selected in 1,000 iterations) from each class. Further, to avoid overfitting and ensure generalizability, we divided the dataset as training, test, and validation with a proportion of 60%, 20%, and 20%, respectively. The reported test (5-folds cross-validation using training and testing data) and validation accuracy of the SVM method are averaged over 1,000 iterations to avoid sampling error and bias.ResultsThe proposed socio-marker model resulted in an average classification accuracy of 63.70% for the test set and 63.67 % for the validation set. Further, the average specificity (the total true negative cases divided by the sum of true negative and false positive) and sensitivity (the total number of true positive cases divided by the sum of positive predicted cases) is found to be 62.79% and 64.77%, respectively for the test set and 62.79% and 64.83%, respectively for the validation set. Results of this study suggest that socio-marker features that are not directly related to a patient’s medical conditions can still predict whether the patient will come back to the hospital within a year or not with approximately 64% accuracy.ConclusionsBringing the socio-marker features in the surveillance system may ease the burden of detecting the patients at risk of revisiting the hospital. The results should be interpreted with caution because we only used 12-month period of observation and the visit beyond the observation window is not considered. Also the patients may have visited different hospitals which are not captured in the data.References1. Booske BC, Athens JK, Kindig DA, Park H, Remington PL: Different perspectives for assigning weights to determinants of health. University of Wisconsin: Population Health Institute 2010.2. Subbarao P, Mandhane PJ, Sears MR: Asthma: epidemiology, etiology and risk factors. Canadian Medical Association Journal 2009, 181(9):E181-E190.3. Gold DR, Wright R: Population disparities in asthma. Annu Rev Public Health 2005, 26:89-113.

Shin, Eun Kyong↗

Inadvertent Hatchery Rainbow Trout Oncorhynchus mykiss Discovered in Native Westslope Cutthroat Trout Oncorhynchus clarkii lewisi Habitat: A Cautionary Tale

Abstract Fish hatcheries across North America release billions of fish into the wild every year to augment harvest opportunities in sport, commercial, and tribal fisheries, as well as to recover depressed populations. Despite these benefits, wild fish populations may be negatively affected when hatchery fish compete and/or hybridize with native species. Native Westslope Cutthroat Trout Oncorhynchus clarkii lewisi have decreased by 90% across their historic range; however, the Flathead River in Montana is a rangewide stronghold for these imperiled fish. The primary threat to Westslope Cutthroat Trout is hybridization with invasive Rainbow Trout O. mykiss, which leads to hybrid swarm formation and genomic extinction. We collected Rainbow Trout in Mill Creek, a tributary of the Flathead River, downstream from a hatchery that produces the species, and used otolith 87Sr/86Sr to determine whether individual fish were inadvertently introduced from the hatchery. Differences in 87Sr/86Sr among water samples from Mill Creek and the marine-derived hatchery food provided high-classification accuracy to determine the natal origins of Mill Creek Rainbow Trout. We found that 83 of the 106 Rainbow Trout collected (78%) were of hatchery origin. Otolith microstructure analysis indicated these fish had been in Mill Creek for ~1–32 weeks prior to capture. Our results illustrate the utility of otolith 87Sr/86Sr to identify hatchery fish in natural habitats and point to a source of invasive Rainbow Trout that pose conservation risks to native fishes in the drainage.

60 APPLIED LIFE SCIENCES↗

Nearest Neighbor Algorithms for Pattern Classification

A solution of the discrimination problem is considered by means of the minimum distance classifier, commonly referred to as the nearest neighbor (NN) rule. The NN rule is nonparametric, or distribution free, in the sense that it does not depend on any assumptions about the underlying statistics for its application. The k-NN rule is a procedure that assigns an observation vector z to a category F if most of the k nearby observations x sub i are elements of F. The condensed nearest neighbor (CNN) rule may be used to reduce the size of the training set required categorize The Bayes risk serves merely as a reference-the limit of excellence beyond which it is not possible to go. The NN rule is bounded below by the Bayes risk and above by twice the Bayes risk.

Barrios, J. O.↗

Hierarchical classification in high dimensional numerous class cases

As progress in new sensor technology continues, increasingly high resolution imaging sensors are being developed. These sensors give more detailed and complex data for each picture element and greatly increase the dimensionality of data over past systems. Three methods for designing a decision tree classifier are discussed: a top down approach, a bottom up approach, and a hybrid approach. Three feature extraction techniques are implemented. Canonical and extended canonical techniques are mainly dependent upon the mean difference between two classes. An autocorrelation technique is dependent upon the correlation differences. The mathematical relationship between sample size, dimensionality, and risk value is derived.

Kim, Byungyong↗

Comparison of CNN-Based Image Classification Approaches for Implementation of Low-Cost Multispectral Arcing Detection

Camera-based sensing has benefited in recent years from developments in machine learning data processing methods, as well as improved data collection options such as Unmanned Aerial Vehicles (UAV) mounted sensors. However, cost considerations, both for the initial purchase of sensors as well as updates, maintenance, or potential replacement if damaged, can limit adoption of more expensive sensing options for some applications. To evaluate more affordable options with less expensive, more available, and more easily replaceable hardware, we examine the use of machine learning-based image classification with custom datasets, utilizing deep learning based-image classification and the use of ensemble models for sensor fusion. Utilizing the same models for each camera to reduce technical overhead, we showed that for a very representative training dataset, camera-based detection can be successful for detection of electrical arcing. We also use multiple validation datasets, based on conditions expected to be of varying difficulty, to evaluate custom data. These results show that ensemble models of different data sources can mitigate risks from gaps in training data, though the system will be less redundant for those cases unless other precautions are taken. We found that with good quality custom datasets, data fusion models can be utilized without specialization in design to the specific cameras utilized, allowing for less specialized, more accessible equipment to be utilized as multispectral camera components. This approach can provide an alternative to expensive sensing equipment for applications in which lower-cost or more easily replaceable sensing equipment is desirable.

convolutional neural networks↗

Enhancing risk and crisis communication with computational methods: A systematic literature review

Abstract Recent developments in risk and crisis communication (RCC) research combine social science theory and data science tools to construct effective risk messages efficiently. However, current systematic literature reviews (SLRs) on RCC primarily focus on computationally assessing message efficacy as opposed to message efficiency. We conduct an SLR to highlight any current computational methods that improve message construction efficacy and efficiency. We found that most RCC research focuses on using theoretical frameworks and computational methods to analyze or classify message elements that improve efficacy. For improving message efficiency, computational and manual methods are only used in message classification. Specifying the computational methods used in message construction is sparse. We recommend that future RCC research apply computational methods toward improving efficacy and efficiency in message construction. By improving message construction efficacy and efficiency, RCC messaging would quickly warn and better inform affected communities impacted by current hazards. Such messaging has the potential to save as many lives as possible.

Mathematical Methods In Social Sciences↗

SeqMask: Behavior Extraction Over Cyber Threat Intelligence Via Multi-Instance Learning

Abstract Identification and extraction of Tactics, Techniques and Procedures (TTPs) for Cyber Threat Intelligence (CTI) restore the full picture of cyber attacks and guide the analysts to assess the system risk. Existing frameworks can hardly provide uniform and complete processing mechanisms for TTPs information extraction without adequate knowledge background. A multi-instance learning approach named SeqMask is proposed in this paper as a solution. SeqMask extracts behavior keywords from CTI evaluated by the semantic impact, and predicts TTPs labels by conditional probabilities. Still, the framework has two mechanisms to determine the validity of keywords. One using expert experience verification. The other verifies the distortion of the classification effect by blocking existing keywords. In the experiments, SeqMask reached 86.07% and 73.99% in F1 scores for TTPs classifications. For the top 20% of keywords, the expert approval rating is 92.20%, where the average repetition of keywords whose scores between 100% and 90% is 60.02%. Particularly, when the top 65% of the keywords were blocked, the F1 decreased to about 50%; when removing the top 50%, the F1 was under 31%. Further, we also validate the possibility of extracting TTPs from full-size CTI and malware whose F1 are improved by 2.16% and 0.81%.

Ge, Wenhan↗

Advanced Characterization of Rare Earth Elements in Coal Utilization Byproducts

Rare earth elements (REE) in various forms (e.g., crystalline mineral phases; adsorbed/absorbed state on and into organic macerals, neoformed glass from flyash or bottom ash) from domestic feedstocks such as coal deposits to coal utilization byproducts (CUB) have the potential to reduce foreign REE dependence and increase domestic resource security. Characterization is critical for understanding environmental risks related to their fate and transport as well as determining the most practical and economical techniques for concentrating the REE and converting them into chemical stocks for manufacturing. Several complementary electron microscopy (SEM-EDS, EPMA-WDS, FIB-SEM, cathodoluminescence, and XRD) and post image processing techniques were used to understand REE transition from coal to CUB. Sites of interest were identified and imaged and respective elemental x-ray maps acquired and montaged. Pixel classification of SEM imagers was completed using image analysis techniques to quantify the distribution of REE associated features. Quantitative elemental analysis of phases were completed using EMPA-WDS followed by FIB-SEM. The FIB-SEM results were reconstructed into 3D volumes and features of interest (e.g. monazite) were analyzed to determine the structure and volumetric estimation of REEs and thus predict detrital REE phases to ICP-MS results. Trace minerals were identified as pyrite, zircon, REE-phosphates' (monazite, xenotime), and barite within the coal tailings. In CUB, amorphous aluminosilicates, iron oxide cenospheres, and calcium oxides were present; monazite appear to be unaltered and unaffected by the combustion process in these samples. Thermal decomposition may have occurred due to presence of detrital zircon and xenotime and subsequent thin Ca-oxide coating enriched in trace REEs.

Verba, Circe↗

VWC-BERT: Scaling Vulnerability–Weakness–Exploit Mapping on Modern AI Accelerators

Defending cybersystems needs accurate mapping of software and hardware vulnerabilities to generalized descriptions of weaknesses, and weaknesses to exploits. These mappings enable cyber defenders to build plans for effective defense and assessment of potential risks to a cybersystem. With close to 170k vulnerabilities, manual mapping is not a feasible option. However, automated mapping is challenging due to limited training data, computational intractability, and limitations in computational natural language processing. Tools based on breakthroughs in Transformer-based language models have been demonstrated to classify vulnerabilities with high accuracy. We make three key contributions in this paper: (1) We present a new framework, \VWCBERT, that augments the Transformer-based hierarchical multi-class classification framework of Das et al. (\textsc{V2W-BERT}) with the ability to map weaknesses to exploits. (2) We implement \VWCBERT~ on modern AI accelerator platforms using two data parallel techniques for the pre-training phase and demonstrate nearly linear speedups across NVIDIA and Graphcore accelerator platforms. We observe nearly linear speedups for up to 16 V100 and 8 A100 GPUs, and about 3.4$\times$ speedup for A100 relative to V100 GPUs. We also observe excellent speedups on Graphcore, with $5.7\times$ speedup on 128 IPUs relative to 16 IPUs. Enabled by scaling, we also demonstrate higher accuracy using a larger language model, RoBERTa-Large. We show up to 87\% accuracy for strict and up to 98\% accuracy for relaxed classification. (3) We develop a novel parallel link manager for the link prediction phase and demonstrate up to 21$\times$ speedup with 16 V100 GPUs relative to one V100 GPU, and thus reducing the runtime from 2.5 hours to 10 minutes. We believe that generalizability and scalability of \VWCBERT~ will benefit both the theoretical development and practical deployment of novel cyberdefense solutions and vulnerability classification.

Das, Siddhartha Shankar↗

Space Mission Concept Development Using Concept Maturity Levels

Over the past five years, pre-project formulation experts at the Jet Propulsion Laboratory (JPL) has developed and implemented a method for measuring and communicating the maturity of space mission concepts. Mission concept development teams use this method, and associated tools, prior to concepts entering their Formulation Phases (Phase A/B). The organizing structure is Concept Maturity Level (CML), which is a classification system for characterizing the various levels of a concept's maturity. The key strength of CMLs is the ability to evolve mission concepts guided by an incremental set of assessment needs. The CML definitions have been expanded into a matrix form to identify the breadth and depth of analysis needed for a concept to reach a specific level of maturity. This matrix enables improved assessment and communication by addressing the fundamental dimensions (e.g., science objectives, mission design, technical risk, project organization, cost, export compliance, etc.) associated with mission concept evolution. JPL's collaborative engineering, dedicated concept development, and proposal teams all use these and other CML-appropriate design tools to advance their mission concept designs. This paper focuses on mission concept's early Pre-Phase A represented by CMLs 1- 4. The scope was limited due to the fact that CMLs 5 and 6 are already well defined based on the requirements documented in specific Announcement of Opportunities (AO) and Concept Study Report (CSR) guidelines, respectively, for competitive missions; and by NASA's Procedural Requirements NPR 7120.5E document for Projects in their Formulation Phase.

Concept Maturity Levels (CMLs)↗

SigTime: Learning and Visually Explaining Time Series Signatures

Understanding and distinguishing temporal patterns in time series data is essential for scientific discovery and decision-making. For example, in biomedical research, uncovering meaningful patterns in physiological signals can improve diagnosis, risk assessment, and patient outcomes. However, existing methods for time series pattern discovery face major challenges, including high computational complexity, limited interpretability, and difficulty in capturing meaningful temporal structures. Here, to address these gaps, we introduce a novel learning framework that jointly trains two Transformer models using complementary time series representations: shapelet-based representations to capture localized temporal structures and traditional feature engineering to encode statistical properties. The learned shapelets serve as interpretable signatures that differentiate time series across classification labels. Additionally, we develop a visual analytics system—SigTime—with coordinated views to facilitate exploration of time series signatures from multiple perspectives, aiding in useful insights generation. We quantitatively evaluate our learning framework on eight publicly available datasets and one proprietary clinical dataset. Additionally, we demonstrate the effectiveness of our system through two usage scenarios along with the domain experts: one involving public ECG data and the other focused on preterm labor analysis.

97 MATHEMATICS AND COMPUTING↗

Developing Coastal Surface Roughness Maps Using ASTER and QuickBird Data Sources

This viewgraph presentation regards one element of a larger project on the integration of NASA science models and data into the Hazards U.S. Multi-Hazard (HAZUS-MH) Hurricane module for hurricane damage and loss risk assessment. HAZUS-MH is a decision support tool being developed by the National Institute of Building Sciences for the Federal Emergency Management Agency (FEMA). It includes the Hurricane Module, which employs surface roughness maps made from National Land Cover Data (NLCD) maps to estimate coastal hurricane wind damage and loss. NLCD maps are produced and distributed by the U.S. Geological Survey. This presentation discusses an effort to improve upon current HAZUS surface roughness maps by employing ASTER multispectral classifications with QuickBird "ground reference" imagery.

Spruce, Joe↗

Security aspects of space operations data

This paper deals with data security. It identifies security threats to European Space Agency's (ESA) In Orbit Infrastructure Ground Segment (IOI GS) and proposes a method of dealing with its complex data structures from the security point of view. It is part of the 'Analysis of Failure Modes, Effects Hazards and Risks of the IOI GS for Operations, including Backup Facilities and Functions' carried out on behalf of the European Space Operations Center (ESOC). The security part of this analysis has been prepared with the following aspects in mind: ESA's large decentralized ground facilities for operations, the multiple organizations/users involved in the operations and the developments of ground data systems, and the large heterogeneous network structure enabling access to (sensitive) data which does involve crossing organizational boundaries. An IOI GS data objects classification is introduced to determine the extent of the necessary protection mechanisms. The proposal of security countermeasures is oriented towards the European 'Information Technology Security Evaluation Criteria (ITSEC)' whose hierarchically organized requirements can be directly mapped to the security sensitivity classification.

Schmitz, Stefan↗

Mechanism-based classification of PAH mixtures to predict carcinogenic potential

We have previously shown that relative potency factors and DNA adduct measurements are inadequate for predicting carcinogenicity of certain polycyclic aromatic hydrocarbons (PAHs) and PAH mixtures, particularly those that function through alternate pathways or exhibit greater promotional activity compared to benzo[ a ]pyrene (BaP). Therefore, we developed a pathway based approach for classification of tumor outcome after dermal exposure to PAH/mixtures. FVB/N mice were exposed to dibenzo[ def,p ]chrysene (DBC), BaP or environmental PAH mixtures (Mix 1-3) following a two-stage initiation/promotion skin tumor protocol. Resulting tumor incidence could be categorized by carcinogenic potency as DBC>>BaP=Mix2=Mix3>Mix1=Control, based on statistical significance. Gene expression profiles measured in skin of mice collected 12 h post-initiation were compared to tumor outcome for identification of short-term bioactivity profiles. A Bayesian integration model was utilized to identify biological pathways predictive of PAH carcinogenic potential during initiation. Integration of probability matrices from four enriched pathways (p<0.05) for DNA damage, apoptosis, response to chemical stimulus and interferon gamma signaling resulted in the highest classification accuracy with leave-one-out cross validation. This pathway-driven approach was successfully utilized to distinguish early regulatory events during initiation prognostic for tumor outcome and provides proof-of-concept for using short-term initiation studies to classify carcinogenic potential of environmental PAH mixtures. As a result, these data further provide a ‘source-to outcome’ model that could be used to predict PAH interactions during tumorigenesis and provide an example of how mode-of-action based risk assessment could be employed for environmental PAH mixtures.

59 BASIC BIOLOGICAL SCIENCES↗