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At least 253 records · Page 14

Effects of Convective Solute and Impurity Transport in Protein Crystal Growth

High-resolution optical interferometry was used to investigate the effects of forced solution convection on the crystal growth kinetics of the model protein lysozyme. Most experiments were conducted with 99.99% pure protein solutions. To study impurity effects, approx. 1% of lysozyme dimer (covalently bound) was added in some cases. We show that the unsteady kinetics, corresponding to bunching of growth steps, can be characterized by the Fourier components of time traces of the growth rate. Specific Fourier spectra are uniquely determined by the solution conditions (composition, temperature, and flow rate) and the growth layer source activity. We found that the average step velocity and growth rate increase by approx. I0% with increasing flow rate, as a result of the enhanced solute supply to the interface. More importantly, faster convective transport results in lower fluctuation amplitudes. This observation supports our rationale for system-dependent effects of transport on the structural perfection of protein crystals. We also found that solution flow rates greater than 500 microns/s result in stronger fluctuations while the average growth rate is decreased. This can lead to growth cessation at low supersaturations. With the intentionally contaminated solutions, these undesirable phenomena occurred at about half the flow rates required in pure solutions. Thus, we conclude that they are due to enhanced convective supply of impurities that are incorporated into the crystal during growth. Furthermore, we found that the impurity effects are reduced at higher crystal growth rates. Since the exposure time of terraces is inversely proportional to the growth rate, this observation suggests that the increased kinetics instability results from impurity adsorption on the interface. Finally, we provide evidence relating earlier observations of "slow protein crystal growth kinetics" to step bunch formation in response to nonsteady step generation.

Vekilov, Peter G.↗

Repartitioning of NaCl and Protein Impurities in Lysozyme Crystallization

Nonuniform precipitant and impurity incorporation in protein crystals can cause lattice strain and, thus, possibly decrease the X-ray diffraction resolution. To address this issue, a series of crystallization experiments were carried out, in which initial supersaturation, NaCl concentration, protein purity level and crystallized fraction were varied. Lysozyme and protein impurities, as well as sodium and chloride were independently determined in the initial solution, supernatant and crystals. The segregation coefficients for Na(+) and Cl(-) were found to be independent of supersaturation and NaCl concentration, and decreased with crystallized fraction/crystal size. Numerical evaluation of the extensive body of data, based on a nucleation-growth- repartitioning model, suggests a core of approx. 40 microns in which salt is incorporated in much greater concentrations than during later growth. Small crystals containing higher amounts of incorporated NaCl also had higher protein impurity contents. This suggests that the excess salt is associated with the protein impurities in the core. X-ray topography revealed strain fields in the center of the crystals comparable in size to the inferred core. The growth rates of crystals smaller than 30-40 pm in size were consistently 1.5-2 times lower than those of larger crystals, presumably due to higher chemical potentials in the core.

Vekilov, Peter G.↗

Investigating the Effect of Impurities on Macromolecule Crystal Growth in Microgravity

Chicken egg-white lysozyme (CEWL) crystals were grown in microgravity and on the ground in the presence of various amounts of a naturally occurring lysozyme dimer impurity. No significant favorable differences in impurity incorporation between microgravity and ground crystal samples were observed. At low impurity concentration the microgravity crystals preferentially incorporated the dimer. The presence of the dimer in the crystallization solutions in microgravity reduced crystal size, increased mosaicity and reduced the signal to noise ratio of the X-ray data. Microgravity samples proved more sensitive to impurity. Accurate indexing of the reflections proved critical to the X-ray analysis. The largest crystals with the best X-ray diffraction properties were grown from pure solution in microgravity.

Snell, Edward H.↗

The GOddard SnoW Impurity Module (GOSWIM) for the NASA GEOS-5 Earth System Model: Preliminary Comparisons with Observations in Sapporo, Japan

The snow darkening module evaluating dust, black carbon, and organic carbon depositions on mass and albedo has been developed for the NASA Goddard Earth Observing System, Version 5 (GEOS-5) Earth System Model, as the GOddard SnoW Impurity Module (GOSWIM). GOSWIM consists of the snow albedo scheme from a previous study (Yasunari et al. 2011) with updates and a newly developed mass concentration scheme, using aerosol depositions from the chemical transport model (GOCART) in GEOS-5. Compared to observations at Sapporo, the numerical experiments, forced by observation-based meteorology and aerosol depositions from GOES-5, better simulated the seasonal migration of snow depth, albedos, and impurities of dust, BC, and OC in the snow surface. However, the magnitude of the impurities is underestimated, compared to the sporadic snow impurity measurements. Increasing the deposition rates of dust and BC could explain the differences on the snow darkening effect between observation and simulation. Ignoring BC deposition can possibly lead to an extension of snow cover duration in Sapporo for four days. Comparing the off-line GOSWIM and the GEOS-5 global simulations, we found that determining better local precipitation and deposition rates of the aerosols are key factors in generating better GOSWIM snow darkening simulation in NASA GEOS-5.

land surface processes↗

Spacecraft Water Impurity Monitor, a System for Water Quality Analysis on Exploration Missions Beyond Low Earth Orbit

Exploration missions beyond low-earth-orbit (LEO) will require advanced instrumentation to monitor water quality. Traveling beyond LEO means the transfer of water samples to an Earth-based laboratory for detailed analysis is not feasible. Detailed analysis of water composition during exploration is still necessary, because having the capability to determine the specific organic chemical causing a change in total organic carbon (TOC) or the specific metal or ionic species causing a change in conductivity has the potential to inform the crew health and system management decisions. On a new vehicle such as a lunar or Mars surface habitat or a Mars transit vehicle, finding “new” impurities not seen on ISS should be expected. The key is to identify the impurity so the correct action can be taken. On ISS we can measure TOC, conductivity, and other physical properties but do not have the capability for detailed analysis using vehicle instrumentation. This is acceptable because ISS can send samples down to Earth for further analysis and obtain the detailed composition. The Spacecraft Water Impurity Monitor (SWIM) will provide detailed water quality analysis for missions in which sample down mass is not available. SWIM is a system comprising organic and inorganic analysis modules. For organic chemicals, a gas chromatograph mass spectrometer (GCMS) detects and identifies organic impurities. For inorganic species, a capillary electrophoresis capacitively coupled contactless conductivity detection (CE-C4D) system as well as ion specific electrodes detect and identify metal ions and other inorganic salts / acids. The SWIM technology demonstration project has completed a System Requirements Review (SRR) to finalize detection requirements and is currently working to refine vehicle interface requirements for a future technology demonstration. The project also has begun preliminary flight design activities for the core analyzers in the instrument suite.

Water Monitoring↗

Spacecraft Water Impurity Monitor, a System for Water Quality Analysis on Exploration Missions Beyond Low Earth Orbit

Exploration missions beyond low-earth-orbit (LEO) will require advanced instrumentation to monitor water quality. Traveling beyond LEO means the transfer of water samples to an Earth-based laboratory for detailed analysis is not feasible. Detailed analysis of water composition during exploration is still necessary, because having the capability to determine the specific organic chemical causing a change in total organic carbon (TOC) or the specific metal or ionic species causing a change in conductivity has the potential to inform the crew health and system management decisions. On a new vehicle such as a lunar or Mars surface habitat or a Mars transit vehicle, finding “new” impurities not seen on ISS should be expected. The key is to identify the impurity so the correct action can be taken. On ISS we can measure TOC, conductivity, and other physical properties but do not have the capability for detailed analysis using vehicle instrumentation. This is acceptable because ISS can send samples down to Earth for further analysis and obtain the detailed composition. The Spacecraft Water Impurity Monitor (SWIM) will provide detailed water quality analysis for missions in which sample down mass is not available. SWIM is a system comprising organic and inorganic analysis modules. For organic chemicals, a gas chromatograph mass spectrometer (GCMS) detects and identifies organic impurities. For inorganic species, a capillary electrophoresis capacitively coupled contactless conductivity detection (CE-C4D) system as well as ion specific electrodes detect and identify metal ions and other inorganic salts / acids. The SWIM technology demonstration project has completed a System Requirements Review (SRR) to finalize detection requirements and is currently working to refine vehicle interface requirements for a future technology demonstration. The project also has begun preliminary flight design activities for the core analyzers in the instrument suite.

Water Monitoring↗

Effect of impurities on supercritical CO2 compatibility

Impurities may affect structural alloy compatibility in both indirect- and direct-fired supercritical CO2 (sCO2) cycles for high efficiency power generation with peak temperatures above 700°C. Using a new multi-pump gas control system, experiments with controlled impurity additions were compared to baseline results in research- or industrial-grade CO2 at 750°C/300 bar. Low level impurities, 50 ppm O2 and 50 ppm H2O, were not found to affect mass change or reaction products after 2,500 h exposures. However, in RG sCO2+1%O2+0.25%H2O, higher reaction rates were observed for both Ni- and Fe-based alloys, but especially Fe-based alloys were strongly affected by these high impurity levels. Analytical TEM was used to characterize the reaction products on alloy 625.

Pint, Bruce↗

Effects of Calcite Impurities in Bentonite Buffer Systems on Uranium(VI) Solution Speciation and Sorption Behavior

In many nuclear waste disposal scenarios, bentonite is the proposed buffer material surrounding nuclear waste containers. Its main mineralogical component, Na-montmorillonite clay, is expected to limit radionuclide mobility to slow diffusion processes due to the clay’s low porosity and permeability, and the high sorption affinity of clay surface complexation and cation exchange sites for many radionuclides. Given its mineral structure, montmorillonite provides two types of porosities that can be accessible to radioactive contaminants: macropores between clay particles and interlayer spaces within clay particles, which become dominant at increasing degrees of bentonite compaction. Despite the fact that bentonite naturally contains a variety of mineral impurities (e.g., quartz, feldspars and calcite), most previous studies have only focused on radionuclide interactions with pure Na-montmorillonite phases. Hence, in this study, we will investigate the influence of calcite impurities on uranium(VI) (U(VI)) solution speciation and sorption behavior in bentonite systems. In the presence of water, calcite impurities are expected to lead to milli-molar concentrations of dissolved calcium over a wide range of pH conditions. Consequently, Ca 2+ could – at least partially – replace Na + on clay cation exchange sites, with further implications for exchange reactions of cationic U(VI) species. In addition, ternary U(VI)-Ca-carbonate solution species (CaUO 2 (CO 3 ) 3 2- and Ca 2 UO 2 (CO 3 ) 3 ) will largely replace U(VI)-carbonate species (UO 2 (CO 3 ) 3 4- and UO 2 (CO 3 ) 2 2- ) at alkaline pH. These larger, but lower-charged U(VI) species, may show different sorption and diffusion characteristics, e.g. if their access to negatively-charged clay interlayer spaces is different from binary U(VI)-carbonate complexes. In this presentation, we will first demonstrate the impacts of calcite impurities on U(VI) solution speciation based on PHREEQC simulations. We will then discuss first results from U(VI) sorption studies in these systems. This research is being performed using funding received from the DOE Office of Nuclear Energy's Nuclear Energy University Program.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Uranium(VI) Sorption onto Montmorillonite Clay in the Presence of Ca2+/Calcite Impurities

The storage of nuclear waste creates a series of significant environmental risks. One attempt to minimize these potential impacts is the use of underground geological repositories, where waste containers are surrounded by geologic buffer materials creating an engineered barrier. One buffer material that has been of interest is bentonite, which is largely composed of montmorillonite clay. These barriers limit the mobility of radioactive contaminants, such as uranium(VI), into environmental systems based on contaminant sorption onto the clay material. System conditions, such as pH, the presence of mineral impurities such as calcite, and the concentrations of U(VI) and atmospheric CO2 also affect the sorption behavior of U(VI) onto these clay barriers. This study focuses on the effects of Ca2+ and calcite (CaCO3), a common impurity found in montmorillonite on the sorption behavior of U(VI). Computer simulations of the chemical solution species (chemical form) of U(VI), in the absence and presence of Ca2+/calcite impurities are performed in parallel with laboratory sorption experiments. Experimental data will be compared to modeling results to help obtain further insights regarding the impacts of Ca2+/calcite impurities on U(VI) solution speciation and sorption behavior onto montmorillonite.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Effect of Impurities in CO2 at Supercritical Pressure on Alloy Compatibility (EPRI)

Direct-fired supercritical CO2 (sCO2) cycles are expected to result in sCO2 with higher impurity levels compared to indirect-fired cycles. Prior work at ambient pressure showed minimal effects of O2 and H2O additions, however, a new experimental rig has been built to have flowing controlled impurity levels at supercritical pressures at ≤800°C. Based on industry input, the first experiment was conducted at 750°C/300 bar in CO2+1%O2-0.25%H2O using 500-h cycles for up to 5,000 h. Compared to research grade sCO2, the results indicate faster reaction rates for Fe-based alloys like 310HN and smaller increases for Ni-based alloys like alloys 617B and 282. It is difficult to quantify the 310HN rate increase because of scale spallation. Characterization of the 5,000 h specimens indicated a thicker reaction product formed, which has not been observed in previous impurity studies at ambient pressure. These results suggest that more studies of impurity effects are needed at supercritical pressures including steels at lower temperatures.

Pint, Bruce↗

Accelerated impurity solver for DMFT and its diagrammatic extensions

Here, we present ComCTQMC, a GPU accelerated quantum impurity solver. It uses the continuous-time quantum Monte Carlo (CTQMC) algorithm wherein the partition function is expanded in terms of the hybridisation function (CT-HYB). ComCTQMC supports both partition and worm-space measurements, and it uses improved estimators and the reduced density matrix to improve observable measurements whenever possible. ComCTQMC efficiently measures all one and two-particle Green's functions, all static observables which commute with the local Hamiltonian, and the occupation of each impurity orbital. ComCTQMC can solve complex-valued impurities with crystal fields that are hybridized to both fermionic and bosonic baths. Most importantly, ComCTQMC utilizes graphical processing units (GPUs), if available, to dramatically accelerate the CTQMC algorithm when the Hilbert space is sufficiently large. We demonstrate acceleration by a factor of over 600 (100) in a simulation of δ-Pu at 600 K with (without) crystal fields. In easier problems, the GPU offers less impressive acceleration or even decelerates the CTQMC. Here we describe the theory, algorithms, and structure used by ComCTQMC in order to achieve this set of features and level of acceleration.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Trace impurity transport in multi-species plasmas with large particle fluxes

A burning fusion plasma has a large inwards flux of fuel and outwards flux of ash. Existing impurity transport theories do not account for a steady-state environment of such large fluxes. In this paper, we extend classical transport theory to account for a background of such fluxes. In a mainly two-ion species magnetized plasma, with oppositely directed density gradients maintained by oppositely directed sources of the two species, trace impurity ions are shown to align with the larger mass ions. This unexpected behavior is derived analytically and simulated numerically using the MITNS (Multiple-Ion Transport Numerical Solver) code. Overall, the result suggests a potential advantage of edge-fueled p-B11 fusion in extracting high-Z impurities, and possible applications in plasma-based separation methods.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Surface Local Impurity Scattering as a Probe for Topological Kondo Insulators

Shortly after the discovery of topological band insulators, topological Kondo insulators (TKIs) is also theoretically predicted. The latter has ignited revival interest in the properties of Kondo insulators. Currently, the feasibility of topological nature in SmB 6 is intensively analyzed by several complementary probes. Here by starting with a minimal-orbital Anderson lattice model, the local electronic structure is explored in a Kondo insulator. It is showed that the two strong topological regimes sandwiching the weak topological regime give rise to a single Dirac cone, which is located near the center or corner of the surface Brillouin zone. It is further found that, when a single impurity is placed on the surface, low-energy resonance states are induced in the weak scattering limit for the strong TKI regimes and the resonance level moves monotonically across the hybridization gap with the strength of impurity scattering potential; while low energy states can only be induced in the unitary scattering limit for the weak TKI regime, where the resonance level moves universally toward the center of the hybridization gap. These impurity-induced low-energy quasiparticles will lead to characteristic signatures in scanning tunneling microscopy/spectroscopy, which has recently found success in probing into exotic properties in heavy fermion systems.

36 MATERIALS SCIENCE↗

Impurity Control in Catalyst Design: The Role of Sodium in Promoting and Stabilizing Co and Co 2 C for Syngas Conversion

The design of supported heterogeneous catalysts requires a detailed understanding of the structure and chemistry of the active surface. Although the chemical components of the active phase, support material, and process feed are typically considered to be the most important factors governing catalyst structure and performance, many common commercial supports contain trace impurities, which can have profound effects on catalyst properties. In this work, we study silica–supported cobalt–based catalysts, which are widely used in syngas conversion to value–added products. Supported metallic Co is a commercial Fischer–Tropsch catalyst, whereas Co 2 C has shown promise for the direct conversion of syngas to higher oxygenates. This study examines the effects of Na, a commonly detected support impurity and a frequently used promoter, on the structure and reactivity of Co and Co 2 C. We show that trace Na impurities significantly decrease catalyst activity of supported metallic Co, and that high Na concentrations result in Co 2 C formation and a loss in Fischer–Tropsch activity. However, in Co 2 C catalysts, Na plays an important role in stabilizing the Co 2 C phase, but excess Na decreases catalyst activity. We use insitu X–ray absorption spectroscopy to study Co 2 C formation and decomposition in the Na–free catalyst under carburization and reaction conditions. Lastly, the work reveals the importance of carefully controlling alkali metal content, particularly at trace levels, in catalyst design.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Pulse Cathodoluminescence of the Impurity Centers in Ceramics Based on the MgAl{sub 2}O{sub 4} Spinel

The spectral and luminescence decay kinetics of magnesium aluminate spinel ceramics prepared by spark plasma sintering (SPS) and the starting nanopowders were studied. It was demonstrated that two types of luminescence in spinel ceramics can be observed after pulse e-beam excitation. The first type is due to intrinsic defects, and the second type due to Cr{sup 3+} and Mn{sup 2+} ions. It was shown that the luminescence decay kinetics for Cr{sup 3+} and Mn{sup 2+} impurity ions can be approximated by the sum of two exponents. The decay times for the Cr{sup 3+} ion are 35 and 409 ns, for the Mn{sup 2+} ion are 29 and 340 ns. High-temperature exposure during SPS synthesis does not lead to a change in the nearest surroundings of impurity ions. In the luminescence spectra of ceramic and powder samples the intensity ratio changes of intrinsic and impurity centers is associated with strong diffuse scattering of light for spinel nanopowders.

36 MATERIALS SCIENCE↗

The Effects of Hydrogen-Like Impurity and Temperature on State Energies and Transition Frequency of Strong-Coupling Bound Polaron in an Asymmetric Gaussian Potential Quantum Well

In the present work, we study the ground state energy, the first excited state energy and the transition frequency (TF) between the two states of the strong-coupling impurity bound polaron in an asymmetric Gaussian potential quantum well (AGPQW) by using the variational method of the Pekar type. By employing quantum statistics theory, the temperature effect on the state energies (SEs) and the TF are also calculated with a hydrogen-like impurity at the coordinate origin of the AGPQW. According to the obtained results, we found that the SEs and the TF are increasing functions of the temperature, whereas they are decreasing ones of the Coulombic impurity potential.

74 ATOMIC AND MOLECULAR PHYSICS↗

Trace impurity analysis in uranium oxide via hybrid quantification techniques—gravimetric standard addition and isotope dilution mass spectrometry

Measurement methods for the analysis of trace impurities in uranium materials, essential in nuclear fuel production and nuclear forensics, are continuously improving. Analytical methods were developed with the goal of lowering uncertainties of next generation certified uranium oxide reference materials for trace impurity concentrations. Through addition of a traceable standard directly into the sample, gravimetric standard addition and isotope dilution followed by analysis on an inductively coupled plasma mass spectrometer can achieve lower uncertainties. In conclusion, results for 28 impurities in CRM 124-1 and 124-6 from NBL Program Office were used for validation of accuracy and comparisons of uncertainties.

36 MATERIALS SCIENCE↗

The Impact of Impurities on Alloy Behavior in Supercritical CO 2 at 700 °C

As part of round robin testing, specimens of commercial alloys 316, 120, 625, and 740 were exposed to 20 MPa research grade CO 2 at 700 °C for up to 1500 h. The first set of specimens had higher mass gain likely due to impurities not flushed from the autoclave at startup. After this issue was corrected, an identical set of specimens exhibited lower mass gains for both the Fe- and Ni-based alloys. The differences in reaction products were characterized to understand the effect of impurities under these conditions. As suggested by the mass change, thicker oxides were formed in each case, primarily for the Fe-based alloys. Furthermore, for the Ni-based alloys, the difference was primarily in the transient stage of oxidation with no change in rate constant. Alloy 120 exhibited increased internal attack, and differences in the scale phases formed were characterized to better understand the effect of impurities. Alloy 740 primarily exhibited a greater depth of internal attack in the first run.

36 MATERIALS SCIENCE↗