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At least 253 records · Page 14

A two-step iterative method for evolving nonlinear acoustic systems to a steady-state

A new approach for evolving two-dimensional nonlinear acoustic systems with flow to a steady state is presented. The approach is a two-step iterative method which is tested on a benchmark acoustic problem for which an exact analytical solution is available. Results are also calculated for a nonlinear acoustic problem for which an exact analytical solution is not known. Results indicate that the two-step method represents a powerful, efficient, and stable method for evolving two-dimensional acoustic systems to a steady state, and that the method is applicable to any number of spatial dimensions and to other hyperbolic systems. It is noted that for the benchmark problem only a single iteration on the method is required when the transient and steady-state field are of the same order of magnitude; however, four iterations are required when the steady-state field is several orders of magnitude smaller than the transient field. This method requires six iterations before achieving a steady state for the nonlinear test problem.

Watson, Willie R.↗

Comparing direct and iterative equation solvers in a large structural analysis software system

Two direct Choleski equation solvers and two iterative preconditioned conjugate gradient (PCG) equation solvers used in a large structural analysis software system are described. The two direct solvers are implementations of the Choleski method for variable-band matrix storage and sparse matrix storage. The two iterative PCG solvers include the Jacobi conjugate gradient method and an incomplete Choleski conjugate gradient method. The performance of the direct and iterative solvers is compared by solving several representative structural analysis problems. Some key factors affecting the performance of the iterative solvers relative to the direct solvers are identified.

Poole, E. L.↗

Upwind relaxation methods for the Navier-Stokes equations using inner iterations

A subsonic and a supersonic problem are respectively treated by an upwind line-relaxation algorithm for the Navier-Stokes equations using inner iterations to accelerate steady-state solution convergence and thereby minimize CPU time. While the ability of the inner iterative procedure to mimic the quadratic convergence of the direct solver method is attested to in both test problems, some of the nonquadratic inner iterative results are noted to have been more efficient than the quadratic. In the more successful, supersonic test case, inner iteration required only about 65 percent of the line-relaxation method-entailed CPU time.

Taylor, Arthur C., III↗

Helicopter trim analysis by shooting and finite element methods with optimally damped Newton iterations

Helicopter trim settings of periodic initial state and control inputs are investigated for convergence of Newton iteration in computing the settings sequentially and in parallel. The trim analysis uses a shooting method and a weak version of two temporal finite element methods with displacement formulation and with mixed formulation of displacements and momenta. These three methods broadly represent two main approaches of trim analysis: adaptation of initial-value and finite element boundary-value codes to periodic boundary conditions, particularly for unstable and marginally stable systems. In each method, both the sequential and in-parallel schemes are used, and the resulting nonlinear algebraic equations are solved by damped Newton iteration with an optimally selected damping parameter. The impact of damped Newton iteration, including earlier-observed divergence problems in trim analysis, is demonstrated by the maximum condition number of the Jacobian matrices of the iterative scheme and by virtual elimination of divergence. The advantages of the in-parallel scheme over the conventional sequential scheme are also demonstrated.

Achar, N. S.↗

Using Minimum-Surface Bodies for Iteration Space Partitioning

A number of known techniques for improving cache performance in scientific computations involve the reordering of the iteration space. Some of these reorderings can be considered as coverings of the iteration space with the sets having good surface-to-volume ratio. Use of such sets reduces the number of cache misses in computations of local operators having the iteration space as a domain. We study coverings of iteration spaces represented by structured and unstructured grids. For structured grids we introduce a covering based on successive minima tiles of the interference lattice of the grid. We show that the covering has good surface-to-volume ratio and present a computer experiment showing actual reduction of the cache misses achieved by using these tiles. For unstructured grids no cache efficient covering can be guaranteed. We present a triangulation of a 3-dimensional cube such that any local operator on the corresponding grid has significantly larger number of cache misses than a similar operator on a structured grid.

Frumlin, Michael↗

Bounded-Angle Iterative Decoding of LDPC Codes

Bounded-angle iterative decoding is a modified version of conventional iterative decoding, conceived as a means of reducing undetected-error rates for short low-density parity-check (LDPC) codes. For a given code, bounded-angle iterative decoding can be implemented by means of a simple modification of the decoder algorithm, without redesigning the code. Bounded-angle iterative decoding is based on a representation of received words and code words as vectors in an n-dimensional Euclidean space (where n is an integer).

Dolinar, Samuel↗

Improvements in Iterative Convergence of FUN3D Solutions

This paper presents a hierarchical adaptive nonlinear iteration method (HANIM) implemented in NASA computational fluid dynamics code, FUN3D, to improve robustness and computational efficiency of FUN3Dsolutions. In contrast to the baseline iterative solver that relies on an approximate Jacobian, a simple multicolor Gauss-Seidel point-implicit iteration scheme, and linear CFL ramping, HANIM is based upon a hierarchy of modules including pre conditioner, generalized conjugate residual, realizability check, nonlinear control,and CFL adaption modules. HANIM performance is systematically compared with the performance of the baseline solver. The iterative solutions are compared for three aerodynamic benchmark cases: a subsonic separated flow around a hemisphere cylinder, a supersonic flow through a long duct, and a subsonic flow over the NASA wing-body juncture model. Two Reynolds-averaged Navier-Stokes turbulence models are used in these computations, namely, the negative variant of the linear one-equation Spalart-Allmar as model and its nonlinear extension based on quadratic constitutive relations.

Li Wang↗

Building the Heart of ITER

US ITER, with General Atomics and other industry partners, is now fabricating the heart of the ITER tokamak: The 60 foot tall central solenoid. This massive electromagnet will initiate and maintain plasma current in the international ITER fusion reactor now under construction in France. ITER is the first fusion device designed to produce a burning plasma--an essential step for fusion energy development. This short offers an inside view of the action at the GA Magnet Technologies Center in California where the central solenoid modules are being produced.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

A relaxed two-step splitting iteration method for computing PageRank

In this paper, we extend the two-step matrix splitting iteration approach by introducing a new relaxation parameter. The main idea is based on the inner–outer iteration for solving the PageRank problems proposed by Gleich et al. (J Sci Comput 32(1): 349–371, 2010) and Bai (Numer Algebra Cont Optim 2(4): 855–862, 2012) and the two-step splitting iteration presented by Gu et al. (Appl Math Comput 271: 337–343, 2015). The theoretical analysis results show that the proposed method is efficient. Numerical experiments demonstrate that the convergence performances of the method are better than the existing methods.

97 MATHEMATICS AND COMPUTING↗

Assessment of the burning-plasma operational space in ITER by using a control-oriented core-SOL-divertor model

In future tokamaks, the control of burning plasmas will require careful regulation of the plasma density and temperature. Along with the design of effective burn-control systems, understanding how the fusion power varies in the density-temperature space is vital for the operation of fusion power plants. Here in this work, the steady-state operational space of ITER is studied using a control-oriented core-plasma model coupled to a two-point model of the scrape-off-layer (SOL) and divertor regions. The two models are coupled through the exchange of input-output parameters. The deuterium and tritium recycling from the wall are output parameters of the SOL-divertor model that are used as input parameters in the core-plasma density balance. Furthermore, the separatrix temperature, which is an output parameter of the SOL-divertor model, is incorporated into the radial core-plasma temperature profiles. Therefore, the temperature-dependent power balance of the plasma core is intimately linked to the SOL-divertor model. Both the power entering the SOL from the core, as determined by the core-plasma power balance, and the separatrix density, as dictated by the core-plasma density balance, are input parameters to the SOL-divertor model. They are control knobs in the SOL-divertor model that can be regulated using the core-plasma actuators: auxiliary power and pellet injection. There are various operational limitations, such as the saturation of the aforementioned actuators, that will prevent ITER from accessing certain high-fusion plasma regimes. The achievable tritium concentration in the fueling lines and the maximum sustainable heat load on the divertor will impose further restrictions. By accounting for these limitations, the ITER operational space is computed based on the coupled core-SOL-divertor model and visualized using Plasma Operation Contour (POPCON) plots that map performance metrics, such as the fusion to auxiliary power ratio, over the density-temperature space. Comparisons are drawn between plasmas with different recycling, confinement, and SOL-divertor conditions.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

ITER Toroidal Interferometer and Polarimeter (TIP) beam refraction in 3D density profiles

Calculations of the expected refraction of the five ITER Toroidal Interferometer and Polarimeter (TIP) chords are presented for a range of conditions including high-density axisymmetric, ELMing H-mode cases and shattered pellet disruption mitigation cases. The calculations are carried out with a newly developed ray tracing code capable of following TIP’s 10.59 μm laser beams through arbitrary 3D electron density profiles. Using JOREK simulations of ELM density perturbations in a 15MA ITER baseline plasma, it is shown that refraction from ELMs is expected to be negligible. It is found, however, that TIP interferometers will be able to clearly resolve the line-integrated density perturbation from ELMs and contribute to the ITER measurement requirement “14. H-mode, ELMs and L-H mode transition indicator”. Calculations of the expected refraction in a NIMROD simulated shattered pellet disruption mitigation scenario with peak local electron densities of n e = 3.7 x 10 21 m -3 (max line-averaged densities of n avg = 1.3 x 10 21 m -3 ) also show tolerable refraction and it is likely that most, if not all chords, would avoid signal loss. In conclusion, for both axisymmetric and structured plasmas with line-averaged densities in the mid to upper 10 21 m -3 range, values likely present only during disruption mitigation, refraction becomes significant and could limit the ability of TIP to make reliable density measurements.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Leveraging Anderson Acceleration for improved convergence of iterative solutions to transport systems

In this note we demonstrate that using Anderson Acceleration (AA) in place of a standard Picard iteration can not only increase the convergence rate but also make the iteration more robust for two transport applications. We also compare the convergence acceleration provided by AA to that provided by moment-based acceleration methods. Additionally, we demonstrate that those two acceleration methods can be used together in a nested fashion. We begin by describing the AA algorithm. At this point, we will describe two application problems, one from neutronics and one from plasma physics, on which we will apply AA. We provide computational results which highlight the benefits of using AA, namely that we can compute solutions using fewer function evaluations, larger time-steps, and achieve a more robust iteration.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Anderson acceleration of the Jacobi iterative method: An efficient alternative to Krylov methods for large, sparse linear systems

We employ Anderson extrapolation to accelerate the classical Jacobi iterative method for large, sparse linear systems. Specifically, we utilize extrapolation at periodic intervals within the Jacobi iteration to develop the Alternating Anderson–Jacobi (AAJ) method. We verify the accuracy and efficacy of AAJ in a range of test cases, including nonsymmetric systems of equations. We demonstrate that AAJ possesses a favorable scaling with system size that is accompanied by a small prefactor, even in the absence of a preconditioner. In particular, we show that AAJ is able to accelerate the classical Jacobi iteration by over four orders of magnitude, with speed-ups that increase as the system gets larger. Moreover, we find that AAJ significantly outperforms the Generalized Minimal Residual (GMRES) method in the range of problems considered here, with the relative performance again improving with size of the system. As a result, the proposed method represents a simple yet efficient technique that is particularly attractive for large-scale parallel solutions of linear systems of equations.

97 MATHEMATICS AND COMPUTING↗

Fast nonlinear iterative solver for an implicit, energy-conserving, asymptotic-preserving charged-particle orbit integrator

Here recently, an asymptotic-preserving (AP) particle orbit integrator has been proposed with remarkable properties including exact energy conservation, the ability to capture of all first-order drifts (including the ∇B-drift), the ability to capture trapped-passing boundaries with parallel velocity extremely close to the critical velocity, and the ability to transition from strongly to weakly magnetized spatial regions. The new AP orbit integrator is implicit, employing a Crank-Nicolson (CN) temporal discretization to ensure exact energy conservation. This, in turn, requires a local nonlinear iteration involving particle velocities and positions, and the local electromagnetic fields, to obtain the new-time solution. Ref. [1] did not attempt to provide an efficient solver for this system, and employed a brute-force GMRES-driven Jacobian-free Newton-Krylov (JFNK) solver to invert the particle orbit equations at every timestep for expediency. While JFNK is robust and reliable, it is also expensive and very intrusive for practical implementations of the method (it requires having the JFNK machinery available and solving a 6 x 6 Jacobian system iteratively once per iteration per particle).

97 MATHEMATICS AND COMPUTING↗

On the role of finite grid extent in SOLPS-ITER edge plasma simulations for JET H-mode discharges with metallic wall

The impact of the finite grid size in SOLPS-ITER edge plasma simulations is assessed for JET H-mode discharges with a metal wall. For a semi-horizontal divertor configuration it is shown that the separatrix density is at least 30% higher when a narrow scrape-off layer (SOL) grid width is chosen in SOLPS-ITER compared to the case for which the SOL grid width is maximised. The density increase is caused by kinetic neutrals being not confined inside the divertor region because of the reduced extent of the plasma grid. In this case, an enhanced level of reflections of energetic neutrals at the low-field side (LFS) metal divertor wall is observed. This leads to a shift of the ionisation source further upstream which must be accounted for as a numerical artefact. An overestimate in the cooling at the divertor entrance is observed in this case, identified by a reduced heat flux decay parameters λ q div . Otherwise and further upstream the mid-plane heat decay length λ q parameter is not affected by any change in divertor dissipation. This confirms the assumptions made for the ITER divertor design studies, i.e. that λ q upstream is essentially set by the assumptions for the ratio radial to parallel heat conductivity. It is also shown that even for attached conditions the decay length relations λ ne > λ Te > λ q hold in the near-SOL upstream. Thus for interpretative edge plasma simulations one must take the (experimental) value of λ ne into account, rather than λ q , as the former actually defines the required minimum upstream SOL grid extent.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Metabolic flux optimization of iterative pathways through orthogonal gene expression control: Application to the β-oxidation reversal

Balancing relative expression of pathway genes to minimize flux bottlenecks and metabolic burden is one of the key challenges in metabolic engineering. This is especially relevant for iterative pathways, such as reverse β-oxidation (rBOX) pathway, which require control of flux partition at multiple nodes to achieve efficient synthesis of target products. Here, we develop a plasmid-based inducible system for orthogonal control of gene expression (referred to as the TriO system) and demonstrate its utility in the rBOX pathway. Leveraging effortless construction of TriO vectors in a plug-and-play manner, we simultaneously explored the solution space for enzyme choice and relative expression levels. Remarkably, varying individual expression levels led to substantial change in product specificity ranging from no production to optimal performance of about 90% of the theoretical yield of the desired products. We obtained titers of 6.3 g/L butyrate, 2.2 g/L butanol and 4.0 g/L hexanoate from glycerol in E. coli, which exceed the best titers previously reported using equivalent enzyme combinations. Since a similar system behavior was observed with alternative termination routes and higher-order iterations, we envision our approach to be broadly applicable to other iterative pathways besides the rBOX. Here, considering that high throughput, automated strain construction using combinatorial promoter and RBS libraries remain out of reach for many researchers, especially in academia, tools like the TriO system could democratize the testing and evaluation of pathway designs by reducing cost, time and infrastructure requirements.

59 BASIC BIOLOGICAL SCIENCES↗

Conceptual design of the tangentially viewing combined interferometer-polarimeter for ITER density measurements

One of the systems planned for the measurement of electron density in ITER is a multi-channel tangentially viewing combined interferometer-polarimeter (TIP). This work discusses the current status of the design, including a preliminary optical table layout, calibration options, error sources, and performance projections based on a CO{sub 2}/CO laser system. In the current design, two-color interferometry is carried out at 10.59 {mu}m and 5.42 {mu}m and a separate polarimetry measurement of the plasma induced Faraday effect, utilizing the rotating wave technique, is made at 10.59 {mu}m. The inclusion of polarimetry provides an independent measure of the electron density and can also be used to correct the conventional two-color interferometer for fringe skips at all densities, up to and beyond the Greenwald limit. The system features five chords with independent first mirrors to reduce risks associated with deposition, erosion, etc., and a common first wall hole to minimize penetration sizes. Simulations of performance for a projected ITER baseline discharge show the diagnostic will function as well as, or better than, comparable existing systems for feedback density control. Calculations also show that finite temperature effects will be significant in ITER even for moderate temperature plasmas and can lead to a significant underestimate of electron density. A secondary role TIP will fulfill is that of a density fluctuation diagnostic; using a toroidal Alfven eigenmode as an example, simulations show TIP will be extremely robust in this capacity and potentially able to resolve coherent mode fluctuations with perturbed densities as low as {delta}n/n Almost-Equal-To 10{sup -5}.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Parallel computation of multigroup reactivity coefficient using iterative method

One of the research activities to support the commercial radioisotope production program is a safety research target irradiation FPM (Fission Product Molybdenum). FPM targets form a tube made of stainless steel in which the nuclear degrees of superimposed high-enriched uranium. FPM irradiation tube is intended to obtain fission. The fission material widely used in the form of kits in the world of nuclear medicine. Irradiation FPM tube reactor core would interfere with performance. One of the disorders comes from changes in flux or reactivity. It is necessary to study a method for calculating safety terrace ongoing configuration changes during the life of the reactor, making the code faster became an absolute necessity. Neutron safety margin for the research reactor can be reused without modification to the calculation of the reactivity of the reactor, so that is an advantage of using perturbation method. The criticality and flux in multigroup diffusion model was calculate at various irradiation positions in some uranium content. This model has a complex computation. Several parallel algorithms with iterative method have been developed for the sparse and big matrix solution. The Black-Red Gauss Seidel Iteration and the power iteration parallel method can be used to solve multigroup diffusion equation system and calculated the criticality and reactivity coeficient. This research was developed code for reactivity calculation which used one of safety analysis with parallel processing. It can be done more quickly and efficiently by utilizing the parallel processing in the multicore computer. This code was applied for the safety limits calculation of irradiated targets FPM with increment Uranium.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗