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At least 253 records · Page 14

The NASA Environment Remote Sensing Analysis Facility (ERSAF) support for Space Shuttle earth observations

It is shown that dedicated premission, real-time, and postmission support for planning, acquiring, and interpreting remotely sensed data of specific sites in terms of illumination geometry, atmospheric transmissivity, and preferred viewing is required in order to acquire the best possible earth-viewing photography for each Shuttle mission. Mission support has resulted in significant advances for the earth observation activities and other experiments carried out by astronauts. Scientific and mission support are described and equipment and capabilities are reviewed. Future advances listed include improvement of existing data bases, expanding access to climatological databases of atmospheric constituents and aerosols, and expanding access to image data such as the DMSP, while Space Station Freedom will require 24-hour operational support.

Helms, David R.↗

Ecological applications of high resolution spectrometry

Future directions of NASA's space program plans include a significant effort at studying the Earth as a system of interrelated ecosystems. As part of NASA's Earth Observing System (Eos) Program a series of space platforms will be launched and operated to study the Earth with a variety of active and passive instruments. Several of the Eos instruments will be capable of imaging the planet's surface reflectance on a large number of very narrow portions of the solar spectrum. After the development of appropriate algorithms, this reflectance information will be used to determine key parameters about the structure and function of terrestrial and aquatic ecosystems and the pattern and processes of those systems across large areas of the globe. Algorithm development applicable to terrestrial systems will permit the inference of ecological processes from high resolution spectrometry data, similar to that to be forthcoming from the Eos mission. The first summer was spent working with tropical soils and relating their reflectance characteristics to particle size, iron content, and color. This summer the emphasis is on vegetation and work was begun with the Forest Ecosystems Dynamics Project in the Earth Resources Branch where both optical and radar characteristics of a mixed conifer/hardwood forest in Maine are being studied for use in a ecological modeling effort. A major series of aircraft overflights will take place throughout the summer. Laboratory and field spectrometers are used to measure the spectral reflectance of a hierarchy of vegetation from individual leaves to whole canopies for eventual modeling of their nutrient content using reflectance data. Key leaf/canopy parameters are being approximated including chlorophyll, nitrogen, phosphorus, water content, and leaf specific weight using high resolution spectrometry alone. Measurements are made of carbon exchange across the landscape for input to a spatial modeling effort to gauge production within the forest. A Geographic Information System approach is used to associate these data, images, and other collateral information for the forest into a database with a common projection suitable for spatial modeling.

Lawrence, William T.↗

SAVS: A Space Analysis and Visualization System

We propose to develop, test, demonstrate, and deliver to NASA a powerful and versatile data acquisition, manipulation, analysis and visualization system which will enhance scientific capabilities in the display and interpretation of diverse and distributed data within an integrated user-friendly environment. Our approach exploits existing technologies and combines three major elements into an easy-to-use interactive package: (1) innovative visualization software; (2) advanced database techniques; and (3) a rich set of mathematical and image processing tools. Visualization capabilities will include one-, two-, and three-dimensional displays, along with animation, compression, warping and slicing functions. Analysis tools will include generic mathematical and statistical techniques along with the ability to use large scale models for interactive interpretation of large volume data sets. Our system will be implemented on Sun and DEC UNIX workstations and on the Stardent Graphics Super computer. Our final deliverable will include complete documentation and a NASA/NSF-CDAW/SUNDIAL campaign demonstration.

Szuszczewicz, Edward P.↗

A new MAP for Mars

A Mars Aerial Platform (MAP) mission capable of generating thousands of very-high-resolution (20 cm/pixel) pictures of the Martian surface is considered. The MAP entry vehicle will map the global circulation of the planet's atmosphere and examine the surface and subsurface. Data acquisition will use instruments carried aboard balloons flying at nominal altitude of about 7 km over the Martian surface. The MAP balloons will take high- and medium-resolution photographs of Mars, sound its surface with radar, and provide tracking data to chart its winds. Mars vehicle design is based on the fourth-generation NTP, NEP, SEP vehicle set that provides a solid database for determining transportation system costs. Interference analysis and 3D image generation are performed using manual system sizing and sketching in conjunction with precise CAD modeling.

Zubrin, Robert↗

SAVS: A Space Analysis and Visualization System

We propose to develop, test, demonstrate, and deliver to NASA a powerful and versatile data acquisition, manipulation, analysis and visualization system which will enhance scientific capabilities in the display and interpretation of diverse and distributed data within an integrated user-friendly environment. Our approach exploits existing technologies and combines three major elements into an easy-to-use interactive package: (1) innovative visualization software; (2) advanced database techniques; and (3) a rich set of mathematical and image processing tools. Visualization capabilities will include one-, two-, and three-dimensinal displays, along with animation, compression, warping and slicing functions. Analysis tools will include generic mathematical and statistical techniques along with the ability to use large scale models for interactive interpretation of large volume data sets. Our system will be implemented on Sun and EC UNIX workstations and on the Stardent Graphics Supercomputer. Our final deliverable will include complete documentation and a NASA/NSF-CDAW/SUNDIAL campaign demonstration.

Szuszczewicz, Edward P.↗

Objectively Identifying Transverse Cirrus Bands in Tropical Cyclones using a Convolutional Neural Network

Transverse cirrus bands (TCBs) are bands of upper-level clouds that are regularly seen in mesoscale and synoptic-scale weather systems. In tropical cyclones, their appearance has been subjectively linked to intensification and the diurnal cycle, but these hypothesized relationships have not been rigorously tested due to the difficulty of objectively identifying TCBs in satellite images. This presentation describes a machine learning technique that successfully identifies TCBs in imagery from the GOES-16 Advanced Baseline Imager. The technique uses a convolutional neural network (CNN) that assigns a probability of each pixel in the image being associated with a TCB. Using the CNN, a database of TCBs from 2018 to 2022 was developed for the Atlantic basin. Statistics using this database will be presented, including the relationship between TCBs and deep-layer vertical wind shear, intensity change, and the TC diurnal cycle.

John Mark Mayhall↗

The Multiplatform Precipitation Feature (MPF) Database: Synthesizing Satellite and Ground-Based Precipitation and Lightning Datasets for Convective Studies

NASA’s Lightning Imaging Sensor (LIS) and the Global Precipitation Measurement (GPM) mission have contributed a wealth of data toward global lightning and precipitation studies, respectively. Combining lightning and precipitation datasets leverages their unique insights into deep convective processes that inform about characteristics of convection and its intensity. Recent efforts to synthesize the LIS and GPM datasets prepare the opportunity for unprecedented large-scale, value-added multiplatform analyses of convection. This data synthesis proof-of-concept study elaborates on the creation of a database of reflectivity-based multiplatform precipitation features (MPFs) that capture a combination of information extracted from spatiotemporally coincident lightning and precipitation data within individual storm features. The space-based GPM Dual-frequency Precipitation Radar (DPR) provides a record of precipitation data, while the GPM Validation Network (VN) additionally incorporates ground-based polarimetric Doppler radar data to provide microphysical and kinematic context to DPR data. The LIS instrument onboard the International Space Station has contributed lightning observations since 2017. MPFs encapsulating information from these datasets are created from isolated regions of filtered, smoothed DPR reflectivity data to which ellipses are fit. Each MPF includes feature location, size, and eccentricity information as well as summary reflectivity characteristics. They also include summaries of precipitation microphysics and derived three-dimensional wind available from ground-based radar data. LIS data provides standard lightning characteristics such as flash count and density to each MPF as well as other informative metrics such as flash area and radiance. Each MPF file includes information about the original data from which the MPF and its characteristics were determined, allowing end-user reconstruction of the ellipse and deeper “level I” analysis of captured data. This database of VN-LIS MPFs enables broad statistical analysis of the relationships between the microphysical, kinematic, and electrical properties of convection. Preliminary results from a demonstration of the database will be described as well as ongoing efforts and avenues for future work.

Lightning↗

Overview of the Digitization Workflow Post Image Acquisition of Apollo Lunar and Antarctic Meteorite Samples Using Agisoft Photoscan for the NASA 3D Astromaterials Virtual Samples Collection

The 3D Virtual Astromaterials Samples (3DVAS) collection is a multi-year funded project to create a digital database of sixty Apollo Lunar and Antarctic Meteorite samples following non-destructive documentation conservation protocols. After initial image processing, the photos are evaluated and processed using unique structure-from-motion photogrammetric techniques in a high performance modelling software designed to create a 3D model from 2D images: Agisoft Photoscan Pro. Agisoft Photoscan Pro uses image processing algorithms and techniques originating in computer vision to resolve 3D models for accurate and detailed visualization of a subject. The software provides a stepwise process that is tailored per model based on spatial and specular reflectance properties, for example. The process includes: photo alignment, creation of a dense point cloud, mesh, and finally texture. Photo alignment is dependent on model properties. The 3DVAS process requires a special rotation platform with calibrated photogrammetric targets, specific distance rotation protocols, and a contrasting background for alignment and scale accuracy. As a result of the photographic process, alignment will complete with two mirrored hemispheres that, in a sense, represent the 2D images overlapping to create a 3D model. Each dense point cloud is analyzed with provided statistical measures in a gradual selection process to eliminate outliers. The point cloud is reduced to include only data valuable to the final model. When a precise dense point cloud is achieved, a mesh and texture are applied. Each model is scaled with scale bar accuracies within 100 microns. Each sample has its own intimate process for modelling; there is no standard for the parameters required in the final creation of a high resolution model. By processing multiple samples, a skill is gained in practice to allow a close definition of the original sample and will result in the most detailed version of the sample shell. This process completes one-fifth of the 3DVAS protocol for providing accurate digital documentation. Each model shell is merged with X-ray Computed Tomography data to create a full volumetric sample. All 3DVAS data will be served on NASA's Astromaterials Acquisition and Curation website with an early subset of data available in 2019 and the 3D Virtual Astromaterials Samples Collection launch in 2020.

Thomas, Andi B.↗

Querying Semi-Structured Data

The amount of data of all kinds available electronically has increased dramatically in recent years. The data resides in different forms, ranging from unstructured data in the systems to highly structured in relational database systems. Data is accessible through a variety of interfaces including Web browsers, database query languages, application-specic interfaces, or data exchange formats. Some of this data is raw data, e.g., images or sound. Some of it has structure even if the structure is often implicit, and not as rigid or regular as that found in standard database systems. Sometimes the structure exists but has to be extracted from the data. Sometimes also it exists but we prefer to ignore it for certain purposes such as browsing. We call here semi-structured data this data that is (from a particular viewpoint) neither raw data nor strictly typed, i.e., not table-oriented as in a relational model or sorted-graph as in object databases. As will seen later when the notion of semi-structured data is more precisely de ned, the need for semi-structured data arises naturally in the context of data integration, even when the data sources are themselves well-structured. Although data integration is an old topic, the need to integrate a wider variety of data- formats (e.g., SGML or ASN.1 data) and data found on the Web has brought the topic of semi-structured data to the forefront of research. The main purpose of the paper is to isolate the essential aspects of semi- structured data. We also survey some proposals of models and query languages for semi-structured data. In particular, we consider recent works at Stanford U. and U. Penn on semi-structured data. In both cases, the motivation is found in the integration of heterogeneous data.

DATA MANAGEMENT↗

Maine Ecological Forecasting III: Utilizing Earth Observations to Monitor Federally Endangered Atlantic Salmon (Salmo salar) Habitat in Maine: An Interactive Workshop

Shifting patterns in land use and land cover (LULC), temperature, and precipitation have exacerbated a rapid decline in Federally Endangered wild Atlantic salmon (Salmo salar) populations. The team at NASA DEVELOP partnered with the Maine Department of Marine Resources (DMR) and the Downeast Salmon Federation (DSF) to create a comprehensive workshop designed to demonstrate the applicability of Earth observations in examining these threats using the Penobscot, Union, and Machias Rivers as case studies. This entailed curating tutorials for acquiring and analyzing satellite data using Google Earth Engine, EarthExplorer, and Earthdata. The team demonstrated how to classify LULC in ArcGIS Pro from 1985 until 2021 using Landsat 5 Thematic Mapper (TM), Landsat 8 Operation Land Imager (OLI), Sentinel-2 MultiSpectral Instrument (MSI), and datasets from the United Stated Geological Survey (USGS) National Land Cover Database (NLCD), showing an overall transition from coniferous forests to other LULC classes. The team also demonstrated how to use historical data from Terra Moderate Resolution Imaging Spectroradiometer (MODIS) and Integrated Multi-satellite Retrievals for Global Precipitation Measurement (GPM IMERG) to generate 2021 land surface temperature (LST) and precipitation maps, respectively, showing that Maine was abnormally dry during the summer in an increasingly warm region. These workshop materials will aid the partners in integrating NASA Earth observations into their future salmon habitat restoration initiatives.

Jonathan Falciani↗

Reducing Centroid Error Through Model-Based Noise Reduction

A method of processing the digitized output of a charge-coupled device (CCD) image detector has been devised to enable reduction of the error in computed centroid of the image of a point source of light. The method involves model-based estimation of, and correction for, the contributions of bias and noise to the image data. The method could be used to advantage in any of a variety of applications in which there are requirements for measuring precise locations of, and/or precisely aiming optical instruments toward, point light sources. In the present method, prior to normal operations of the CCD, one measures the point-spread function (PSF) of the telescope or other optical system used to project images on the CCD. The PSF is used to construct a database of spot models representing the nominal CCD pixel outputs for a point light source projected onto the CCD at various positions incremented by small fractions of a pixel.

Lee, Shinhak↗

Exploration Medical System Trade Study Tools Overview

ExMC is creating an ecosystem of tools to enable well-informed medical system trade studies. The suite of tools address important system implementation aspects of the space medical capabilities trade space and are being built using knowledge from the medical community regarding the unique aspects of space flight. Two integrating models, a systems engineering model and a medical risk analysis model, tie the tools together to produce an integrated assessment of the medical system and its ability to achieve medical system target requirements. This presentation will provide an overview of the various tools that are a part of the tool ecosystem. Initially, the presentation's focus will address the tools that supply the foundational information to the ecosystem. Specifically, the talk will describe how information that describes how medicine will be practiced is captured and categorized for efficient utilization in the tool suite. For example, the talk will include capturing what conditions will be planned for in-mission treatment, planned medical activities (e.g., periodic physical exam), required medical capabilities (e.g., provide imaging), and options to implement the capabilities (e.g., an ultrasound device). Database storage and configuration management will also be discussed. The presentation will include an overview of how these information tools will be tied to parameters in a Systems Modeling Language (SysML) model, allowing traceability to system behavioral, structural, and requirements content. The discussion will also describe an HRP-led enhanced risk assessment model developed to provide quantitative insight into each capability's contribution to mission success. Key outputs from these various tools, to be shared with the space medical and exploration mission development communities, will be assessments of medical system implementation option satisfaction of requirements and per-capability contributions toward achieving requirements.

Mindock, J.↗

A Chlorophyll-a Algorithm for Landsat-8 Based on Mixture Density Networks

Retrieval of aquatic biogeochemical variables, such as the near-surface concentration of chlorophyll-a (Chla) in inland and coastal waters via remote observations, has long been regarded as a challenging task. This manuscript applies Mixture Density Networks (MDN) that use the visible spectral bands available by the Operational Land Imager (OLI) aboard Landsat-8 to estimate Chla. We utilize a database of co-located in situ radiometric and Chla measurements (N = 4,354), referred to as Type A data, to train and test an MDN model (MDN(A)). This algorithm’s performance, having been proven for other satellite missions, is further evaluated against other widely used machine learning models (e.g., support vector machines), as well as other domain-specific solutions (OC3), and shown to offer significant advancements in the field. Our performance assessment using a held-out test data set suggests that a 49% (median) accuracy with near-zero bias can be achieved via the MDN(A) model, offering improvements of 20 to 100% in retrievals with respect to other models. The sensitivity of the MDN(A) model and benchmarking methods to uncertainties from atmospheric correction (AC) methods, is further quantified through a semi-global matchup dataset (N = 3,337), referred to as Type B data. To tackle the increased uncertainties, alternative MDN models (MDN(B)) are developed through various features of the Type B data (e.g., Rayleigh-corrected reflectance spectra ρ(s)). Using held-out data, along with spatial and temporal analyses, we demonstrate that these alternative models show promise in enhancing the retrieval accuracy adversely influenced by the AC process. Results lend support for the adoption of MDN(B) models for regional and potentially global processing of OLI imagery, until a more robust AC method is developed. Index Terms—Chlorophyll-a, coastal water, inland water, Landsat-8, machine learning, ocean color, aquatic remote sensing.

Brandon Smith↗

Evaluation of Alternate Concepts for Synthetic Vision Flight Displays With Weather-Penetrating Sensor Image Inserts During Simulated Landing Approaches

A simulation study was conducted in 1994 at Langley Research Center that used 12 commercial airline pilots repeatedly flying complex Microwave Landing System (MLS)-type approaches to parallel runways under Category IIIc weather conditions. Two sensor insert concepts of 'Synthetic Vision Systems' (SVS) were used in the simulated flights, with a more conventional electro-optical display (similar to a Head-Up Display with raster capability for sensor imagery), flown under less restrictive visibility conditions, used as a control condition. The SVS concepts combined the sensor imagery with a computer-generated image (CGI) of an out-the-window scene based on an onboard airport database. Various scenarios involving runway traffic incursions (taxiing aircraft and parked fuel trucks) and navigational system position errors (both static and dynamic) were used to assess the pilots' ability to manage the approach task with the display concepts. The two SVS sensor insert concepts contrasted the simple overlay of sensor imagery on the CGI scene without additional image processing (the SV display) to the complex integration (the AV display) of the CGI scene with pilot-decision aiding using both object and edge detection techniques for detection of obstacle conflicts and runway alignment errors.

Parrish, Russell V.↗

Breast Cancer Found Incidentally After Reduction Mammaplasty in Young Insured Women

Background: Reduction mammaplasty is a common operation performed for healthy women. The estimated incidence of breast cancer diagnosed at the time of reduction mammaplasty varies from 0.06 to 4.5%, and information on the care of these patients is limited. This study aimed to determine the incidence of breast cancer identified incidentally during reduction mammaplasty and to characterize preoperative imaging. Methods: Women 18 years of age or older who underwent reduction mammaplasty from 2013 to 2015 were identified from the Truven Health MarketScan{sup ®} Research Databases. Patients with prior breast cancer were excluded. Descriptive statistics were calculated for patient characteristics, incidental breast cancer, preoperative breast imaging, and postoperative treatment. Results: Reduction mammaplasty was performed for 18,969 women with a mean age of 42.5 years. Of these patients, 186 (0.98%) were incidentally found to have breast cancer, with 134 (0.71%) having invasive breast cancer and 52 (0.27%) having carcinoma in situ. The patients with incidentally found cancer were older than the patients without cancer (50.8 vs. 42.5 years; p < 0.001). Overall, 58.2% of the patients had undergone mammography before reduction mammoplasty. The rates were higher (> 80%) for the patients older than 40 years. Preoperative mammography was performed for 76.3% of those with a diagnosis of breast cancer at time of reduction mammoplasty. Conclusions: Breast cancer diagnosed incidentally at the time of reduction mammaplasty is uncommon and often radiographically occult. The majority of women older than 50 years appropriately received preoperative mammography. These data can be used to manage patient expectations about the potential for the incidental diagnosis of breast cancer at reduction mammaplasty, even with a negative preoperative mammography.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Image-Guided Intraoperative Assessment of Surgical Margins in Oral Cavity Squamous Cell Cancer: A Diagnostic Test Accuracy Review

The assessment of resection margins during surgery of oral cavity squamous cell cancer (OCSCC) dramatically impacts the prognosis of the patient as well as the need for adjuvant treatment in the future. Currently there is an unmet need to improve OCSCC surgical margins which appear to be involved in around 45% cases. Intraoperative imaging techniques, magnetic resonance imaging (MRI) and intraoral ultrasound (ioUS), have emerged as promising tools in guiding surgical resection, although the number of studies available on this subject is still low. The aim of this diagnostic test accuracy (DTA) review is to investigate the accuracy of intraoperative imaging in the assessment of OCSCC margins. By using the Cochrane-supported platform Review Manager version 5.4, a systematic search was performed on the online databases MEDLINE-EMBASE-CENTRAL using the keywords “oral cavity cancer, squamous cell carcinoma, tongue cancer, surgical margins, magnetic resonance imaging, intraoperative, intra-oral ultrasound”. Ten papers were identified for full-text analysis. The negative predictive value (cutoff < 5 mm) for ioUS ranged from 0.55 to 0.91, that of MRI ranged from 0.5 to 0.91; accuracy analysis performed on four selected studies showed a sensitivity ranging from 0.07 to 0.75 and specificity ranging from 0.81 to 1. Image guidance allowed for a mean improvement in free margin resection of 35%. IoUS shows comparable accuracy to that of ex vivo MRI for the assessment of close and involved surgical margins, and should be preferred as the more affordable and reproducible technique. Both techniques showed higher diagnostic yield if applied to early OCSCC (T1–T2 stages), and when histology is favorable.

60 APPLIED LIFE SCIENCES↗

STARBASE: Database software for the automated plate scanner

The Automated Plate Scanner (APS) of the University of Minnesota, a unique high speed 'flying spot' laser scanner, is currently being used to scan and digitize the 936 O and E plate pairs of the first epoch Palomar Sky Survey. The resultant database will be used to produce a catalog of approximately a billion stars and several million galaxies. The authors describe the ongoing development of a dedicated APS database management system which will be made available to the astronomical community via INTERNET. A specialized DBMS called STARBASE has been written to provide fast access to the hundreds of millions of images collected by the APS. This system provides an initial reduction mode for parameterizing APS images and classifying image types using a novel set of neural network image classifiers. A second analysis mode, which will be that commonly used by the general user, provides for searches of the database which may be constrained by any combination of physical and positional parameters. Through the use of pointer hash trees, the system has been optimized for extremely fast positional searches using either right ascension and declination on the sky or linear X and Y positions on the POSS field. In addition to fast data retrieval, the system provides a graphical interface for displaying scatter plots or histograms of the collected data. In addition, a specialized image display system is being developed to allow the user to view densitometric data for all objects classified as extended by the neural network system. Finally, STARBASE has a flexible programmable interface which allows other programs to access information in the database. This allows users to write applications suited to their particular needs to process APS data.

Odewahn, S. C.↗

Spatial top-down proteomics for the functional characterization of human kidney

Background: The Human Proteome Project has credibly detected nearly 93% of the roughly 20,000 proteins which are predicted by the human genome. However, the proteome is enigmatic, where alterations in amino acid sequences from polymorphisms and alternative splicing, errors in translation, and post-translational modifications result in a proteome depth estimated at several million unique proteoforms. Recently mass spectrometry has been demonstrated in several landmark efforts mapping the human proteoform landscape in bulk analyses. Herein, we developed an integrated workflow for characterizing proteoforms from human tissue in a spatially resolved manner by coupling laser capture microdissection, nanoliter-scale sample preparation, and mass spectrometry imaging. Results: Using healthy human kidney sections as the case study, we focused our analyses on the major functional tissue units including glomeruli, tubules, and medullary rays. After laser capture microdissection, these isolated functional tissue units were processed with microPOTS (microdroplet processing in one-pot for trace samples) for sensitive top-down proteomics measurement. This provided a quantitative database of 616 proteoforms that was further leveraged as a library for mass spectrometry imaging with near-cellular spatial resolution over the entire section. Notably, several mitochondrial proteoforms were found to be differentially abundant between glomeruli and convoluted tubules, and further spatial contextualization was provided by mass spectrometry imaging confirming unique differences identified by microPOTS, and further expanding the field-of-view for unique distributions such as enhanced abundance of a truncated form (1-74) of ubiquitin within cortical regions. Conclusions: We developed an integrated workflow to directly identify proteoforms and reveal their spatial distributions. Where of the 20 differentially abundant proteoforms identified as discriminate between tubules and glomeruli by microPOTS, the vast majority of tubular proteoforms were of mitochondrial origin (8 of 10) where discriminate proteoforms in glomeruli were primarily hemoglobin subunits (9 of 10). These trends were also identified within ion images demonstrating spatially resolved characterization of proteoforms that has the potential to reshape discovery-based proteomics because the proteoforms are the ultimate effector of cellular functions. Applications of this technology have the potential to unravel etiology and pathophysiology of disease states, informing on biologically active proteoforms, which remodel the proteomic landscape in chronic and acute disorders.

59 BASIC BIOLOGICAL SCIENCES↗