Search for squarks and gluinos in final states with same-sign leptons and jets using 139 fb –1 of data collected with the ATLAS detector
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72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
SEARCH · Engineering Papers
Results for “Data search”
Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.
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Geological remote sensing in Africa
Programs using remote sensing to obtain geologic information in Africa are reviewed. Studies include the use of Landsat MSS data to evaluate petroleum resources in sedimentary rock terrains in Kenya and Sudan and the use of Landsat TM 30-m resolution data to search for mineral deposits in an ophiolite complex in Oman. Digitally enhanced multispectral SPOT data at a scale of 1:62,000 were used to map folds, faults, diapirs, bedding attitudes, and stratigraphic units in the Atlas Mountains in northern Algeria. In another study, SIR-A data over a vegetated and faulted area of Sierra Leone were compared with data collected by the Landsat MSS and TM systems. It was found that the lineaments on the SIR-A data were more easily detected.
Sabins, Floyd F., Jr.↗
Accurate Identification of Deamidation and Citrullination from Global Shotgun Proteomics Data Using a Dual-Search Delta Score Strategy
While proteins with deamidated/citrullinated amino acids play critical roles in the pathogenesis of many human diseases, identifying these modifications in complex biological samples has been an ongoing challenge. Herein we present a method to accurately identify these modifications from shotgun proteomics data from a deep proteome profiling study of human pancreatic islets obtained by laser capture microdissection. All MS/MS spectra were searched against database by MSGF+ twice with or without a +0.9840 Da mass shift on amino acids asparagine, glutamine, and arginine (NQR) as a dynamic modification. Consequently, for each spectrum the resulting two peptide-to-spectrum matches (PSM) with their respective MSGF+ scores were used for Delta Score calculation. It was observed that all PSMs with positive Delta Score values were clustered with mass errors around 0 ppm, while PSMs with negative Delta Score values were distributed nearly equally within the defined mass error range (20 ppm) for database searching. To estimate false discovery rate (FDR), a “pseudo-decoy” approach was applied whether datasets were searched against a database with a “real modification” mass shift (+0.9840 Da) and a “mock modification” mass shift (+1.0227 Da). FDR was controlled to ~2% with a Delta Score filter greater than zero. Manual inspection of spectra showed that PSMs with positive Delta Score value contained deamidated/citrullinated fragments in their MS/MS spectra. Finally, the results demonstrated that in-situ deamidated/citrullinated peptides can be accurately identified from shotgun tissue proteomics data by the Dual-search Delta Score Strategy.
59 BASIC BIOLOGICAL SCIENCES↗
Application of a Hough Search for Continuous Gravitational Waves on Data from the Fifth LIGO Science Run
We report on an all-sky search for periodic gravitational waves in the frequency range 50-1000 Hertz with the first derivative of frequency in the range −8.9 × 10(exp −10) Hertz per second to zero in two years of data collected during LIGO's fifth science run. Our results employ a Hough transform technique, introducing a chi(sup 2) test and analysis of coincidences between the signal levels in years 1 and 2 of observations that offers a significant improvement in the product of strain sensitivity with compute cycles per data sample compared to previously published searches. Since our search yields no surviving candidates, we present results taking the form of frequency dependent, 95% confidence upper limits on the strain amplitude h(sub 0). The most stringent upper limit from year 1 is 1.0 × 10(exp −24) in the 158.00-158.25 Hertz band. In year 2, the most stringent upper limit is 8.9 × 10(exp −25) in the 146.50-146.75 Hertz band. This improved detection pipeline, which is computationally efficient by at least two orders of magnitude better than our flagship Einstein@Home search, will be important for 'quicklook' searches in the Advanced LIGO and Virgo detector era.
neutron stars↗
Bayesian forecasts for dark matter substructure searches with mock pulsar timing data
Dark matter substructure, such as primordial black holes (PBHs) and axion miniclusters, can induce phase shifts in pulsar timing arrays (PTAs) measurements due to gravitational effects. In order to gain a more realistic forecast for the detectability of such models of dark matter with PTAs, we propose a Bayesian inference framework to search for phase shifts generated by PBHs and perform the analysis on mock PTA data. Furthermore, for most PBH masses the constraints on the dark matter abundance agree with previous (frequentist) analyses (without mock data) to $\mathcal{O}$(1) factors. This further motivates a dedicated search for PBHs (and dense small scale structures) in the mass range from 10 -8 M ⊙ to well above 10 2 M ⊙ with the Square Kilometer Array. Moreover, with a more optimistic set of timing parameters, future PTAs are predicted to constrain PBHs down to 10 -11 M ⊙ . Lastly, we discuss the impact of backgrounds, such as Supermassive Black Hole Mergers, on detection prospects, suggesting a future program to separate a dark matter signal from other astrophysical sources.
79 ASTRONOMY AND ASTROPHYSICS↗
Photometric Detection of Extra-Solar Planets
This NASA Origins Program grant supported the TEMPEST Texas McDonald Photometric Extrasolar Search for Transits) program at McDonald Observatory, which searches for transits of extrasolar planets across the disks of their parent stars. The basic approach is to use a wide-field ground-based telescope (in our case the McDonald Observatory 0.76m telescope and it s Prime Focus Corrector) to search for transits of short period (1-15 day orbits) of close-in hot-Jupiter planets in orbit around a large sample of field stars. The next task is to search these data streams for possible transit events. We collected our first set of test data for this program using the 0.76 m PFC in the summer of 1998. From those data, we developed the optimal observing procedures, including tailoring the stellar density, exposure times, and filters to best-suit the instrument and project. In the summer of 1999, we obtained the first partial season of data on a dedicated field in the constellation Cygnus. These data were used to develop and refine the reduction and analysis procedures to produce high-precision photometry and search for transits in the resulting light curves. The TeMPEST project subsequently obtained three full seasons of data on six different fields using the McDonald Observatory 0.76m PFC.
Hatzes, Artie P.↗
Infrared/submillimeter optical properties data base
The general goal was to build a data base containing optical properties, such as reflectance, transmittance, refractive index, in the far infrared to submillimeter wavelength region. This data base would be limited to selected crystalline materials and temperature between 300 and 2 K. The selected materials were: lithium, lead, and strontium; the bromides of potassium and thallium; the carbides of silicone and tungsten; and the materials of KRS5, KRS6, diamond, and sapphire. Last summer, barium fluoride was selected as prototype material for building the data base. This summer the literature search, preparation of the data for barium fluoride was completed. In addition the literature search for data related to the compounds mentioned was completed. The current status is that barium fluoride is in a form suitable for a NASA internal publication. The papers containing the data on the other materials were xeroxed and they are ready to be reduced. On the reverse side, the top figure is a sample combination of data for the index of refraction at 300 K. The lower figure shows the transmittance vs wavelength at 300 and 80 K. These figures are a sample of many which were developed. Since barium fluoride was studied more than most of the materials listed above, it is clear that additional measurements should be made to fill in the gaps present on both temperature and wavelength data.
Alley, Phillip W.↗
National Climate Assessment - Land Data Assimilation System (NCA-LDAS) Data and Services at NASA GES DISC
The National Climate Assessment-Land Data Assimilation System (NCA-LDAS) is an Integrated Terrestrial Water Analysis, and is one of NASAs contributions to the NCA of the United States. The NCA-LDAS has undergone extensive development, including multi-variate assimilation of remotely-sensed water states and anomalies as well as evaluation and verification studies, led by the Goddard Space Flight Centers Hydrological Sciences Laboratory (HSL). The resulting NCA-LDAS data have recently been released to the general public and include those from the Noah land-surface model (LSM) version 3.3 (Noah-3.3) and the Catchment LSM version Fortuna-2.5 (CLSM-F2.5). Standard LSM output variables including soil moistures temperatures, surface fluxes, snow cover depth, groundwater, and runoff are provided, as well as streamflow using a river routing system. The NCA-LDAS data are archived at and distributed by the NASA Goddard Earth Sciences Data and Information Services Center (GES DISC). The data can be accessed via HTTP, OPeNDAP, Mirador search and download, and NASA Earth data Search. To further facilitate access and use, the NCA-LDAS data are integrated into the NASA Giovanni, for quick visualization and analysis, and into the Data Rods system, for retrieval of time series of long time periods. The temporal and spatial resolutions of the NCA-LDAS data are, respectively, daily-averages and 0.125x0.125 degree, covering North America (25N 53N; 125W 67W) and the period January 1979 to December 2015. The data files are in self-describing, machine-independent, CF-compliant netCDF-4 format.
data assimiliation↗
NLSP: NASA Life Sciences Portal
NASA’s Life Sciences Ports (NLSP) serves the scientific community by providing curated data from space life science experiment. The Human Research Program (HRP) with the help of NLSP is currently transforming their life sciences data archive systems and processes to improve compliance with the FAIR principles. Some of these improvements will at the same time support the twin pillars of Open Science: transparency of methods and reproducibility of results. This video is a high level overview of the NLSP for existing and new users.
Life Sciences data↗
ISAIA: Interoperable Systems for Archival Information Access
The ISAIA project was originally proposed in 1999 as a successor to the informal AstroBrowse project. AstroBrowse, which provided a data location service for astronomical archives and catalogs, was a first step toward data system integration and interoperability. The goals of ISAIA were ambitious: '...To develop an interdisciplinary data location and integration service for space science. Building upon existing data services and communications protocols, this service will allow users to transparently query hundreds or thousands of WWW-based resources (catalogs, data, computational resources, bibliographic references, etc.) from a single interface. The service will collect responses from various resources and integrate them in a seamless fashion for display and manipulation by the user.' Funding was approved only for a one-year pilot study, a decision that in retrospect was wise given the rapid changes in information technology in the past few years and the emergence of the Virtual Observatory initiatives in the US and worldwide. Indeed, the ISAIA pilot study was influential in shaping the science goals, system design, metadata standards, and technology choices for the virtual observatory. The ISAIA pilot project also helped to cement working relationships among the NASA data centers, US ground-based observatories, and international data centers. The ISAIA project was formed as a collaborative effort between thirteen institutions that provided data to astronomers, space physicists, and planetary scientists. Among the fruits we ultimately hoped would come from this project would be a central site on the Web that any space scientist could use to efficiently locate existing data relevant to a particular scientific question. Furthermore, we hoped that the needed technology would be general enough to allow smaller, more-focused community within space science could use the same technologies and standards to provide more specialized services. A major challenge to searching for data across a broad community is that information that describe some data products are either not relevant to other data or not applicable in the same way. Some previous metadata standard development efforts (e.g., in the earth science and library communities) have produced standards that are very large and difficult to support. To address this problem, we studied how a standard may be divided into separable pieces. Data providers that wish to participate in interoperable searches can support only those parts of the standard that are relevant to them. We prototyped a top-level metadata standard that was small and applicable to all space science data.
Hanisch, Robert J.↗
NASA's GeneLab: An Integrated Omics Data Commons and Workbench
GeneLab (http://genelab.nasa.gov) is a NASA initiative designed to accelerate “open science” biomedical research in support of the human exploration of space and the improvement of life on earth. The GeneLab Data Systems (GLDS) were developed to help investigators corroborate findings from “omics” (genomics, transcriptomics, proteomics, and metabolomics) assays and translate them into systems biology knowledge and, eventually, therapeutics, including countermeasures to support life in space. Phase I of the project (completed) emphasized developing key capabilities for submission, curation, storage, search, and retrieval of omics data from biomedical research in and of space environments. The development focus for Phase II (completed) was federated data search and retrieval of these kinds of data from other open-access repositories. The last phase of the project (in work) entails developing an omics analysis tool set, and a portal to visualize processed omics data, emphasizing integration with the data repository and search functions developed during the prior phases. The final product will be an open-access system where users can individually or collaboratively publish, search, integrate, analyze, and visualize omics data.
genome↗
NASA's GeneLab: An Integrated Omics Data Commons and Workbench
GeneLab (http://genelab.nasa.gov) is a NASA initiative designed to accelerate "open science" biomedical research in support of the human exploration of space and the improvement of life on earth. The GeneLab Data Systems (GLDS) were developed to help investigators corroborate findings from "omics" (genomics, transcriptomics, proteomics, and metabolomics) assays and translate them into systems biology knowledge and, eventually, therapeutics, including countermeasures to support life in space. Phase I of the project (completed) emphasized developing key capabilities for submission, curation, storage, search, and retrieval of omics data from biomedical research in and of space environments. The development focus for Phase II (completed) was federated data search and retrieval of these kinds of data from other open-access repositories. The last phase of the project (in work) entails developing an omics analysis tool set, and a portal to visualize processed omics data, emphasizing integration with the data repository and search functions developed during the prior phases. The final product will be an open-access system where users can individually or collaboratively publish, search, integrate, analyze, and visualize omics data.
genome↗
NASA's GeneLab: An Integrated Omics Data Commons and Workbench
GeneLab (http://genelab.nasa.gov) is a NASA initiative designed to accelerate "open science" biomedical research in support of the human exploration of space and the improvement of life on earth. The GeneLab Data Systems (GLDS) were developed to help investigators corroborate findings from "omics" (genomics, transcriptomics, proteomics, and metabolomics) assays and translate them into systems biology knowledge and, eventually, therapeutics, including countermeasures to support life in space. Phase I of the project (completed) emphasized developing key capabilities for submission, curation, storage, search, and retrieval of omics data from biomedical research in and of space environments. The development focus for Phase II (completed) was federated data search and retrieval of these kinds of data from other open-access repositories. The last phase of the project (in work) entails developing an omics analysis tool set, and a portal to visualize processed omics data, emphasizing integration with the data repository and search functions developed during the prior phases. The final product will be an open-access system where users can individually or collaboratively publish, search, integrate, analyze, and visualize omics data.
Berrios, Daniel C.↗
LIGO-VIRGO Triggered Follow-Up with NASA High Energy Photon Survey Missions
We discuss the proposed use of LIGO-VIRGO S6 triggers from comparatively loud events to search for both prompt and afterglow EM counterparts with RXTE, SWIFT and FERMI. Using a 2 or 3-fold coincident trigger from the two LIGO and one VIRGO detectors to provide sky position information, we can search the data from these missions within a limited time window and a constrained portion of their respective FOVs, allowing us to look at a level below the threshold normally used to publicly indicate an event. Since we propose to use these missions in their survey mode, no re-pointing of the missions is envisioned. The search for a coincidence between the data from LIGO-VIRGO and the EM survey missions can then be analyzed off-line; if a coincident EM signal is found it would have a significant effect in establishing the validity of the GW trigger. We discuss some relevant aspects of the NASA missions and give some preliminary estimates of thresholds and coincident background rates.
Camp, Jordan↗
Central On-Line Data Directory
The National Space Science Data Center (NSSDC) Central On-Line Data Directory (CODD), which allows the general scientist remote access to information about data sets available not only at NSSDC, but throughout the scientific community, is discussed. A user may search for data set information within CODD by specifying spacecraft name, experiment name, investigator name, and/or keywords. CODD will include information on atmospheric science data sets contained not only within the PCDS, but also within other data sets that are deemed important. Keywords to be used in locating these data sets are currently being formulated. The main type of keyword to be used for categorization of data sets will be discipline related. The primary discipline keyword for PCDS-type data sets would be ATMOSPHERIC SCIENCE. A good set of subdiscipline keywords is needed under this discipline to subdivide the data sets. A sheet containing a strawman set of subdiscipline keywords was distributed, and a request was made for the knowledgeable scientists to modify or replace the proposed keywords.
Thieman, J.↗
Mail LOG: Program operating instructions
The operating instructions for the software package, MAIL LOG, developed for the Scout Project Automatic Data System, SPADS, are provided. The program is written in FORTRAN for the PRIME 300 computer system. The MAIL LOG program has the following four modes of operation: (1) INPUT - putting new records into the data base (2) REVISE - changing or modifying existing records in the data base (3) SEARCH - finding special records existing in the data base (4) ARCHIVE - store or put away existing records in the data base. The output includes special printouts of records in the data base and results from the INPUT and SEARCH modes. The MAIL LOG data base consists of three main subfiles: Incoming and outgoing mail correspondence; Design Information Releases and Releases and Reports; and Drawings and Engineering orders.
Harris, D. K.↗
All-sky search in early O3 LIGO data for continuous gravitational-wave signals from unknown neutron stars in binary systems
Rapidly spinning neutron stars are promising sources of continuous gravitational waves. Detecting such a signal would allow probing of the physical properties of matter under extreme conditions. A significant fraction of the known pulsar population belongs to binary systems. Searching for unknown neutron stars in binary systems requires specialized algorithms to address unknown orbital frequency modulations. We present a search for continuous gravitational waves emitted by neutron stars in binary systems in early data from the third observing run of the Advanced LIGO and Advanced Virgo detectors using the semicoherent, GPU-accelerated, binaryskyhough pipeline. The search analyzes the most sensitive frequency band of the LIGO detectors, 50–300 Hz. Binary orbital parameters are split into four regions, comprising orbital periods of three to 45 days and projected semimajor axes of two to 40 light seconds. No detections are reported. We estimate the sensitivity of the search using simulated continuous wave signals, achieving the most sensitive results to date across the analyzed parameter space.
Gravitation↗
Decontamination and Sterilization of Surfaces using Low Cost Ionic Liquids (CRADA Final Report)
The current study made a comprehensive literature review of the structure activity relationship (SAR) for microcidal and virucidal influence of ionic liquids. It summarized the key structure parameters that have close correlation to the antimicrobial and antiviral properties of the ILs. It proposed an experimental plan on developing and testing an effective ionic liquid from renewable lignocellulosic biomass. The goal is to understand the structure activity relationship (SAR) for virucidal influence of ionic liquids through comprehensive literature search and data analysis. A full experimental plan will be drafted based on the literature summary. Perform a comprehensive literature search to aid the development of an effective and easily deployable method to inactivate SARS-CoV-2 and decontaminate surfaces based on low-cost functional ionic liquids. These designer solvents have the potential to be a compelling and environmentally friendly alternative to common chemical disinfectants. Literature summary report including reported ionic liquid structures, synthesis and testing methods, and the structure activity relationship. Experimental plan on developing a low cost effective antiviral ionic liquid.
59 BASIC BIOLOGICAL SCIENCES↗