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All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Calibration and Commissioning of the LSST

Understanding the nature of dark energy and dark matter remains one of the fundamental questions in physics today; impacting our understanding of particle physics, cosmology, and possibly theories of gravity. Given the scale and complexity of the next generation of cosmology experiments (e.g., the Rubin Observatory, the Euclid satellite mission, and the Roman space telescope) we are entering an era where statistical noise no longer determines the accuracy to which we can measure cosmological parameters. Our ability to control and correct for systematics will ultimately determine the scientific impact of these experiments. This award addressed the challenge of how we determine what limits the accuracy of our cosmological measures, what techniques are appropriate for measuring and calibrating the properties of galaxies to best constrain cosmological models, how to develop statistical techniques that are insensitive to systematic errors, and how to optimize survey strategies in order to minimize systematics while maximizing the speed at which an experiment can achieve its science objectives. In this final technical report for award DE-SC0011635 we describe a set of open-source frameworks that simulate the characteristics and properties of current and planned cosmology surveys and the application of these frameworks to the development of new methodologies for estimating the properties and distances to galaxies that are robust to noisy and incomplete data.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

2021 Annual Site Environmental Report

This report provides the U.S. Department of Energy (DOE) and the public with information on the level of radioactive and non-radioactive pollutants (if any) that are added to the environment as a result of Princeton Plasma Physics Laboratory’s (PPPL) operations. The results of PPPL’s 2021 environmental surveillance and monitoring program are presented and discussed. The report also summarizes environmental initiatives, assessments, and community involvement programs that were undertaken in 2021. PPPL’s on-site operations were significantly curtailed in 2021 due to the global coronavirus pandemic. PPPL has engaged in fusion energy research since 1951. The Laboratory’s mission is to develop the scientific knowledge and advanced engineering to enable fusion to power the U.S. and the world, and to developing the understanding of plasmas from the nano- to the astrophysical scale. PPPL’s primary experiment, the National Spherical Torus Experiment-Upgrade (NSTX-U) is a collaboration among national laboratories, universities, and national and international research institutions and is a major element in the US Fusion Energy Sciences Program. Its design tests the physics principles of spherical torus (ST) plasmas, playing an important role in the development of smaller, more economical fusion reactors. Due to previous operational issues, NSTX-U did not operate in 2021. PPPL is engaged in a project to replace key NSTX-U components and systems to enable operation of this international fusion user facility. In 2021, PPPL’s radiological environmental monitoring program measured tritium in the air at the NSTX-U Stack and at onsite sampling stations. Using highly sensitive air monitors, PPPL is capable of detecting small changes in the ambient levels of tritium. The operation of an in-stack monitor located on D-site is used to demonstrate compliance with the National Emission Standard for Hazardous Air Pollutants (NESHAPs) regulations. Also included in PPPL’s radiological environmental monitoring program, are water monitoring – ground, surface, and waste waters. PPPL’s radiological monitoring program characterized the background levels of tritium in the environment and those data are presented in this report. Ground water monitoring continued under New Jersey Department of Environmental Protection’s (NJDEP) Site Remediation Program regulations. PPPL monitored for non-radiological contaminants, mainly volatile organic compounds (components of common degreasing solvents). In 2021, PPPL complied with permit limits for surface and sanitary discharges. PPPL was honored with awards for EPEAT-certified electronics purchasing and use of peracetic acid as an alternative water treatment chemical in its non-potable process water systems an NJDEP recycling award.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2023

Controlling High-Valent Reactivity in Earth Abundant Metals (Final Report)

This is a Final Technical Report of DOE AWARD NUMBER: DE-SC0009363. PROJECT TITLE: “Controlling High-Valent Reactivity in Earth Abundant Metals”. PROJECT PERIOD: AUGUST 16, 2019 TO AUGUST 15, 2022. This report provides a comprehensive summary of all work completed under this award.

36 MATERIALS SCIENCE↗
DOE OSTI2023

Development and Test of Simulation Tools for EIC Beam-Beam Interaction (Final Technical Report)

This final technical report summarizes the work of the Michigan State University (MSU) team supported by grant # DE-SC0018973 awarded by the Office of Nuclear Physics, Department of Energy. The awarded proposal is a joint effort of Brookhaven National Laboratory (BNL, led by Dr. Yun Luo), Lawrence Berkeley National Laboratory (LBNL, led by Dr. Ji Qiang), Thomas Jefferson National Accelerator Facility (TJNAF, led by Dr. Yves Roblin) and MSU (led by Dr. Yue Hao). The MSU personnel supported by the grant include Dr. Yue Hao and Dr. Derong Xu, who is hired as a postdoctoral research fellow. MSU team ‘s work in this proposal focused on the beam dynamics study and numerical simulation of crabbed collision with crab cavities. Analytical calculations and numerous simulations have been done to identify beam dynamics effect out of numerical noises, study the synchro-betatron resonance in the crab crossing scheme, evaluate the effects of non-ideal settings for crab cavity and the effects of the crab crossing noises. The results have been published in journals and as conference proceedings. From the results of the proposal, we gained a clear understanding of the beam-beam interaction in the EIC designs and provided robust countermeasures to possible beam-beam interaction related to beam lifetime reduction, beam emittance growth, beam instabilities, and luminosity degradation, which significantly mitigate the technical risks associated with the EIC accelerator designs.

43 PARTICLE ACCELERATORS↗
DOE OSTI2023

Analysis of Organic Electron Materials using Neutron Scattering (Final Report)

Neutron scattering is a powerful suite of measurement techniques that enable unique analysis of structure and dynamics of a wide variety of materials. Specifically, neutrons interact strongly with protons, which enables excellent contrast in light element organic materials that cannot be obtained with any other measurements. This series of three proposals focused on using inelastic neutron scattering (INS) to study the vibrations (dynamics) of the organic molecules involved in organic electronic devices. Our main goals were to demonstrate that INS is capable of elucidating new, useful, and unique knowledge about organic electronic samples that could be used to improve the function of devices or to solve outstanding problems that could not be solved using other measurement techniques. Since all of the goal involved using INS or other neutron techniques to do something “new” a large part of the effort was focused on complex data interpretation and development of modeling workflows that could be used by other members of the organic electronics community to study their materials. To facilitate the goal of making INS measurements more accessible to a broader community and for a wider range of materials, we optimized and engineered the computational workflows to be well documented, publicly available, and user friendly. The individual titles of the three sequential DOE-BES awards are: (1) Engineering doping profiles in organic semiconducting materials, (2) Measurement and modeling of molecular dopant structure and dynamics, and (3) Quantification of Dynamic Disorder in Electronic and Excitonic Organic Materials. For readability, this report is organized to highlight the progress of the research thematically. Many of the ideas started in one grant period and then spilled over into later awards and collaborative research.

36 MATERIALS SCIENCE↗
DOE OSTI2023

Novel X-Ray Probes of Electronically Heterogeneous Quantum Materials

The goal of this research was to advance the use of resonant soft x-ray scattering (RSXS) by deepening our theoretical understanding of the technique and expanding its use to a wide range of materials. Under this award, we showed how RSXS techniques can be applied to oxide heterostructures, studied commensuration effects in Wigner crystals, discovered a charge density wave in nickel-arsenide superconductors, and measured time-resolved dynamics of charge order in copper-oxide superconductors, among many other achievements. This award contributed to adoption of RSXS techniques by researchers around the nation and the world.

36 MATERIALS SCIENCE↗
DOE OSTI2021

Building Neutron Scattering Infrastructure in Louisiana for Advanced Materials (Final Report)

The main objective of the Louisiana Consortium for Neutron Scattering (LaCNS) is to build a major neutron scattering infrastructure capable of treating both soft and hard materials. The goal is to create a sustainable effort having the quality, breadth, and depth necessary to produce competitive proposals including collaborative and center type proposals. Our scientific aim is to understand the role of coupling in emergent complex materials and its impact on the structure/property relationship and to explore how to tune the key couplings to guide the design of materials with the desired properties. This naturally includes building a base of users of the Spallation Neutron Source (SNS) and the High Flux Isotope Reactor (HFIR) in Louisiana; to train highly talented graduate and post-doctoral students in synthesis, neutron scattering, and simulation and modeling techniques, thereby helping to produce the next generation of scientist who use neutron scattering techniques as a crucial part of their research. The goal of our hard matter program is to understand the interplay between spin, charge, orbital, and lattice degrees of freedom in carefully selected complex materials. We have made considerable progress on number of complex systems including the oxide Sr3(Ru1-xMnx)2O7 where short-range magnetic ordering with anisotropic spin texture is initiated at the metal-insulator transition that clearly indicates a strong spin-charge coupling. Another critical area is in quantum materials. For example, in the topological semimetal BaMnSb2, we found a 3D canted antiferromagnetic Weyl semimetal with a 2D electronic structure and a nontrivial Berry phase. In addition, in the hexagonal chiral Mn1/3NbS2 system, we found soliton/soliton and soliton/antisoliton domain walls where the application of small fields or small currents can be used to control nanoscopic magnetic domains where the control of domain walls is crucially important for information storage. In addition, chemical transformation investigations were performed on the VISION instrument at Spallation Neutron Source (SNS). The soft matter effort was focused on understanding the role of non-covalent interactions on the structure and dynamics of fluid-based soft matter. One key focus was on sequence-defined (SD) amphiphilic peptoid polymers that allow encoding of molecular interactions and thereby systematic investigations of how charge directs the solution self-assembly of amphiphilic polymers in water. Another important area was on the dynamics of lipids self-assembled into membranes for exploring the permeability and mechanical using both neutron spin echo (NSE) spectroscopy and quasielastic neutron scattering (QENS) to distinguished between viscoelasticity and permeability at the molecular scale. Overall, the LaCNS project was quite successful, generating 145 publications and 245 presentations. Our graduate and post-doctoral students were well trained resulting in positions in national laboratories (Oak Ridge National Laboratory (ORNL), Argonne National Laboratory and Los Alamos National Laboratory), major research universities, and industry. We also developed a uniaxial pressure cell along with ORNL for SNS. A critical goal of this project was to establish a foundation for competing nationally in federally funded research programs. To this end, we were quite successful in generating over twenty-two federally and non-federally funded grants including awards from NSF, DOE, and DOD, and two early career awards. Equally important, we were able to secure a key major piece of instrumentation via a large ARO grant for a state-of-the-art electron microscope.

36 MATERIALS SCIENCE↗
DOE OSTI2023

New England Aqua Ventus I: 100% Hull Design (Final Technical Report)

This report serves as the final technical report for the US Department of Energy (DOE) award DE-EE0006713 (Award 6713). The project is titled “New England Aqua Ventus I Offshore Wind Advanced Technology Demonstration Project 100% Front-End Engineering and Design (FEED)”. The New England Aqua Ventus I (NEAV) project demonstrates a unique prestressed concrete semi-submersible floating hull technology, called VolturnUS. The technology is applicable to harness nearly 60% of the US offshore wind resource within 50 miles of the coast. The hull will be demonstrated at full-scale with a commercial scale wind turbine connected to the grid in the Northeast US off Monhegan Island, Maine for 20 years.

17 WIND ENERGY↗
DOE OSTI2023

Dark Matter and Track Triggering with the CMS Experiment (Final Report)

This report summarizes the progress from DOE Early Career Award entitled “Dark Matter and Track Triggering with the CMS Experiment”. The first major goal of the project was to establish a sensitive Dark Matter (DM) search program for the CMS experiment in Run-2 of the LHC. Two related strategies were developed to accomplish this goal. First, we designed and executed searches for DM produced in association with heavy flavor quark pairs, top/anti-top (ttbar) and bottom/anti-bottom (bbbar). In addition, we sought to maximize the power of Run-2 DM searches through the development of a statistical combination of all major search channels within a consistent theoretical framework. The results of these aspects of the project are detailed in Section 1. The second major goal of the project was to develop a real-time “Level-1” tracking trigger system for the high-luminosity LHC (HL-LHC) CMS upgrade. Charged particle tracking in the first stage of the CMS trigger will be crucial for surviving the high-pileup environment expected at the HL-LHC. The L1 tracking trigger must process all front-end hit data sent from the inner Tracker and will have just 4us to output track primitives to the downstream L1 trigger without data loss. Our development of the CMS tracking trigger is described in Section 2. The team supported by the award is given in Section 3. The project resulted in 10 peer reviewed publications, a graduate student thesis, and contributions to the CMS Phase-2 Tracker Technical Design Report, as is detailed in Section 4. Our development work for the CMS tracking trigger has been integrated in the backend system architecture for the Tracker upgrade.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2023

Small-Molecule Catalysis by Transition-Metal Isocyanide Monomers, Clusters and Materials

DOE Catalysis Science Award DE-SC0018243 focused on the development and mechanistic understanding of small-molecule-activation and catalysis by monomeric and multinuclear transition-metal complexes supported by encumbering m-terphenyl isocyanide ligands. An additional goal of this award was the development of solid-state network materials featuring low-valent metal centers and ditopic m-terphenyl isocyanide ligands into functional platforms for catalytic chemical transformations. The emphasis on m-terphenyl isocyanides stems from a sustained effort by our research team that has shown these ancillary ligands to be particularly adept at stabilizing electronically or coordinately unsaturated metal centers. These metal centers in turn have been shown to effect catalytic and/or stoichiometric chemical transformations of substrates relevant to high-priority energy science goals. In addition, the stabilizing environment provided by these encumbering ligands has in several instances aided the detailed mechanistic elucidation of substrate activation process and/or have enabled important electronic structure insights to be uncovered.

36 MATERIALS SCIENCE↗
DOE OSTI2023

University Coalition for Fossil Fuel Energy Research

Following a nationwide open competition, the University Coalition for Fossil Energy Research (UCFER) was established in October 2015 through a cooperative agreement between Penn State and the Department of Energy (DOE) National Energy Technology Laboratory (NETL). Penn State lead UCFER with the objective of advancing basic and applied research for clean and low-carbon energy based on fossil fuels in support of the DOE’s mission. UCFER focused on research that improves the efficiency of production and use of fossil energy resources, while minimizing the environmental impacts and reducing greenhouse gas emissions. Penn State lead a team of nine universities (Massachusetts Institute of Technology, The Pennsylvania State University, Princeton University, Texas A&M University, University of Kentucky, University of Southern California, The University of Tulsa, University of Wyoming, and Virginia Polytechnic and State University) during the competition stage, adding seven more universities in 2017 (Carnegie Mellon University, Louisiana State University, The Ohio State University, University of North Dakota, University of Pittsburgh, University of Utah, and West Virginia University). This Coalition exhibited a wide geographical distribution across the U.S. bringing a wide variety of fossil energy expertise. This national university alliance was a major collaborative effort with NETL to address specific topics of R&D in NETL’s mission area, which involved one or more of NETL’s five core competencies (Geologic and Environmental Systems, Materials Engineering and Manufacturing, Energy Conversion Engineering, Systems Engineering and Analysis, and Computational Science and Engineering). The first five to six months of the project was the definitization stage. During this period, Penn State worked closely with NETL to finalize the Coalition organizational structure and By- Laws, prepare a statement of substantial involvement and a statement of project objectives, and develop operations and membership plans. A major component of this stage included preparing an execution plan to solicit research, evaluate proposals, recommend selected projects to NETL, and award projects. In addition, a plan was prepared to monitor projects, review projects, disseminate knowledge from research projects and develop an online system for Coalition research portfolio management. This included developing a website and several databases. The first of six rounds of solicitations started in mid-2016. Projects from the sixth solicitation started February 1, 2021, and ended January 31, 2023. Projects that were selected represented twelve technology lines. Approximately $16.6 million in funding was available for the six solicitations. Most of the funding was provided by DOE, Office of Fossil Energy (DOEFE) with the DOE Fuel Cells Technologies Office (DOE-FCTO) providing funding for a few projects. Coalition universities submitted 259 proposals in response to the solicitations, requesting approximately $67.0 million in funding, and forty-three projects were selected. However, one project withdrew after the principal investigator left the university. The management of the Coalition projects was a major activity by Penn State. Managing the Coalition projects consisted of monitoring the projects, reviewing the projects through annual technical review meetings, disseminating knowledge from the research projects, and developing an online system for Coalition research portfolio management. Penn State’s OMT monitored projects to ensure that all milestones (technical, schedule, budget) were met, expenditures were allowable, cost share (when applicable) were reported, and all technical reports were submitted. The OMT also posted the technical reports electronically on a secure members-only website for access and review by the Coalition members. Disseminating knowledge from the research projects was done through a website, newsletters, various meetings, conferences, journal articles, publicity/press releases, and project summaries that were prepared after each project was completed. Penn State kept NETL apprised of UCFER progress through quarterly reports (thirtyone were submitted by Penn State), verbal and written communications, yearly updates at the annual technical review meetings, and cost accrual reports. The UCFER project had a significant impacty. The UCFER program established the first national university alliance in fossil energy research with a major collaboration effort with DOE NETL that addressed specific topics in NETL’s research and development mission areas. It generated inter-university collaborations, which was another program interest. Twenty-two out of 259 proposals contained collaborations (≈8.5%) and three of forty-two funded projects involved inter-university collaborations (≈7.0%). The forty-two funded projects provided support at fourteen universities involving 269 personnel. Research was conducted by 106 faculty, 115 graduate and undergraduate students, forty-six research staff and post-doctoral scholars, and two visiting scholars. Students and post-doctoral scholars were also on-site at NETL through CRADAs. In addition, non-Coalition participants included six universities and sixteen companies and national laboratories. The non-Coalition participants were involved as subcontractors, providers of cost share, performed unpaid consultation and sample analysis, served as advisory board members, or were providers of samples and materials for testing. UCFER also produced visibility in that fifty-six refereed journal articles were published, fifty-seven conference papers and twenty-three posters were prepared, 190 presentations were given, eight patent applications were filed, two books/book chapters were written, and ten software codes were developed. Collaboration between NETL and the individual projects was a major requirement for all funded projects. This included NETL staff time to support collaboration, consultation, technical guidance, sample preparation and analysis, internships at NETL, on-site testing and equipment usage by Coalition participants at NETL, co-mentoring students, and coauthoring journal articles and conference papers. Collaboration was impacted by COVID-19 in that not all on-site activities could be performed. NETL personnel were coauthors on eight of the conference papers (fourteen percent of the conference papers that were prepared) and seventeen of the journal articles (thirty percent of the journal articles that were prepared). A website was developed for an online proposal solicitation and review process and to provide exposure to UCFER. A website analysis highlighted the large amount of member and general public interest in UCFER by interpreting access statistics from March 2016 through June 2023. Visitors to the site originated from many different organizations, businesses, and countries. The website provided a means to disseminate information to both the general public and the UCFER members and was successfully used for outreach activities. In addition, NETL required that RFP release, proposal submission, and proposal reviews all be performed online. Penn State successfully developed these capabilities in a secure section of the website, which were used throughout the UCFER project. It is recognized that each project had its technical successes. In addition, highlighted successes were compiled and summarized from the research projects. Information was requested from the PIs of completed projects. In addition, Penn State’s Operations Management Team reviewed subcontract reports to identify project successes. Examples of information requested from PIs included (not all-inclusive): new projects that have been funded as a result of UCFER funding; new commercial products; establishment of a new center; new patent; new software; best paper awards; highly-cited work; and graduate student successes. A total of forty-eight highlighted successes were reported.

01 COAL, LIGNITE, AND PEAT↗
DOE OSTI2023

MST e-News Summer 2023

David Andersson (Materials Science in Radiation and Dynamic Extremes, MST-8) is the recipient of the 2023 American Nuclear Society (ANS) Mishima Award. The award recognizes outstanding contributions of an individual in research and development work on nuclear fuels and materials. Andersson is a staff scientist on MST-8’s Modeling of Radiation Effects team. An expert in atomistic modeling of nuclear fuels—both traditional UO 2 light water reactor fuel and advanced accident tolerant fuel concepts—he has been involved in numerous international and national multiscale simulation efforts to develop models for use in nuclear fuel performance simulations.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗
DOE OSTI2023

Water Recovery From Cooling Tower Plumes

According to studies by the UN and the US State Department, we are on the path to an extreme freshwater shortage by 2030. The US’s largest water withdrawal source is power plants, which account for 39% of total US freshwater withdrawals, mostly for cooling. Cooling towers are the most common cooling system. To solve these problems and enable efficient water- based cooling – Infinite Cooling’s novel technology uses electric fields to ionize the air, charge the escaping water leaving cooling towers and direct the water toward mesh collectors where it collects and gets recycled for use in the cooling system. This technology was developed at MIT and was reduced to practice on a lab-scale prototype, and a prototype at the MIT Cogeneration Power Plant. This DOE award funded taking this technology from a lab-scale prototype to TRL 5 on an operating cooling tower in the field at the MIT Nuclear Research Laboratory. The funding helped to design and optimize an electrostatic plume collection system and test it in high-fidelity lab setting and in actual field conditions on a cooling tower. Throughout the award, Infinite Cooling investigated the formation of plumes on cooling towers, used that information to optimize the design, material and electrical properties of the collection device and quantified the collection yield via flow rate and water quality.

20 FOSSIL-FUELED POWER PLANTS↗
DOE OSTI2022

High Pressure and Two-Sided Mold Surface Solutions (CRADA Final Report)

This project provided surface solutions for highly loaded precision tooling relevant to the automotive industry. Previous development work in coatings for Big Area Additive Manufacturing (BAAM) has produced commercialized coatings for low temperature Acrylonitrile Butadiene Styrene (ABS) tools (TD Coat RT) as well as a soft coating for high temperature applications (TD Seal HT). The team developed these coatings and commercialized them during a prior Manufacturing Demonstration Facility (MDF) technical collaboration (NFE-15-05793). During the prior collaboration, commercialization testing was successfully performed by the Boeing and NAVAIR and resulted in an Awards for Composites Excellence (ACE), award at CAMX – The Composites and Advanced Materials Expo 2016. While this work was clearly successful, gaps in the technology were identified, that prevent widespread adoption of large-scale additive manufacturing in high pressure tooling applications prevalent in the automotive industry. In this project we focused on development of surface solutions for two-sided, compression molding tooling printed on a large-scale polymer AM system in an arbitrary build orientation. We have printed a single cavity extrusion compression molding mold using Polyphenylene sulfide/carbon fiber (PPS/CF) materials, 50% by weight CF samples. These processes are commonly used by Original Equipment Manufacturers (OEM) and Tier 1 suppliers for high volume automotive applications. Several OEMs have identified the need for such technology, indicating significant time and monetary savings could be possible if commercially available surface solutions for high pressure Additive Manufacturing (AM) tooling existed.

36 MATERIALS SCIENCE↗
DOE OSTI2023

Distribution Network Capacity Market Design: Marginal Distribution Capacity Pricing Mechanism for Efficient Investment and Cost Allocation

As electricity markets begin to shift from reliance on large, centralized power plants and towards distributed energy resources (DERs), there is a growing acknowledgement that more efficient planning, operations, and oversight is needed in the distribution system. This paper addresses one step in that direction by proposing an auction mechanism that uses a detailed distribution system planning model that allocates permits to end-used customers who request capacity to install new devices at their location and network upgrade contracts to utilities or 3rd-party companies who offer to upgrade system components. The resulting plan maximizes market surplus, that is, maximizes the total benefit to consumers minus the cost of network upgrades. We apply a marginal pricing scheme to the auction’s results such that the cost of each permits or contracts is differentiated by time and location, based on the Lagrangian multipliers of binding network constraints. These prices are shown to be no greater than the bid price of any awarded contract and no less than the offered cost of any awarded upgrade contract. Furthermore, the nonlinearity of power flows in the planning model result in an additional surplus that would be collected by the entity that hosts the auction, which could then be refunded to market participants or used to cover overhead costs of running the market. We provide four example auction results in a simple three-node distribution feeder to demonstrate the properties of the design. Results suggest that larger or more realistic case studies could be a promising next step.

24 POWER TRANSMISSION AND DISTRIBUTION↗
DOE OSTI2024

Machine learning approaches for integrating multi-omics data to expand microbiome annotation

Preliminary: This final report corresponds to a grant (DE-SC0021216) that was awarded to the University of Montana. Mid-way through the grant period, I relocated from the University of Montana to the University of Arizona. The grant was ended at University of Montana in late 2022, with all efforts concluding on 08/26/22; the remaining funds supporting the project were relinquished by University of Montana, and were later awarded to University of Arizona under a new grant, with start date 04/01/23. This report focuses on results of research efforts at UMontana through 08/26/22. Results: We made progress in each of the three aims of the proposal. We released software that identifies and fills gaps in the annotation of metabolic proteins within bacterial genomes. We made substantial progress in developing software for alignment-based annotation of protein coding DNA, allowing for coding frameshifts caused by sequencing error. Finally, we made notable progress in developing AI methods (specifically: a neural embedding model) for identifying similarities between protein sequences based on amino-wise latent vectors. These efforts were supplemented by development of methods for protein modeling in support of predicting protein-drug binding activity, and by my leadership of a team in the NIH/DOE 2021 Petabyte-Scale Sequence Search hack-a-thon.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2024

Nuclear Physics of Compact Binaries with GADGET

The research goal of this project was to experimentally constrain the thermonuclear rate of the 15 O(α, Υ) 19 Ne reaction, whose uncertainty has a strong influence on the modeling of astrophysical Type-I X-ray bursts on accreting neutron stars. To this end, Experiment 21072 was run in November 2022 at the Facility for Rare Isotope Beams using the GADGET II detection system. The limited scope and duration of this award included work in the year following the experiment: drafting a technical paper on the time projection chamber of the GADGET II detection system, and analysis of data from Experiment 21072. The award contributed to the education and development of the scientific and technical workforce by partially supporting one postdoctoral Research Associate who did this work.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2024

Collaborative Research: Vlasov-Maxwell Simulations to Resolve Electron Heating and Dissipation, in Quasi-Perpendicular Shocks (Final Report)

Collisionless shocks are a grand challenge problem in plasma physics and have been the subject of study for more than six decades. Shocks are ubiquitous phenomena in the universe and are responsible for transforming high energy and momentum flows into thermal energy and energetic particles. Understanding how shocks operate is of primary importance to understand the sun-earth coupling, protecting manned missions and spacecrafts from high energy particles, inertial confinement fusion, and radiation observed from astrophysical plasmas, such as supernova remnants and astrophysical jets. A major unanswered question on this frontier is, how does a collisionless plasma transform flow energy and momentum into electron thermal energy? Many potential mechanisms have been proposed to perform the conversion between flow and thermal energy in a collisionless plasma, but the answer has been elusive. To solve the mystery, non-relativistic perpendicular and quasi-perpendicular shocks are studied via a coordinated approach employing cutting-edge numerical simulations with the continuum kinetic code Gkeyll and spacecraft observations supplied by NASA's Magnetospheric Multiscale (MMS) mission. In both sets of data, we employ novel techniques to identify how and where energy is exchanged between electromagnetic fields and plasma particles. By combining cutting-edge spacecraft data and numerical simulations with these diagnostics, we have been able to identify some of the primary mechanisms responsible electron heating and dissipation in heliospheric shocks. In addition to electron dynamics, we have complete access to proton simulation and in situ data, enabling us to characterize proton heating and acceleration in quasi-perpendicular shocks. Many astrophysical quasi-perpendicular shocks have similar parameters to those in this study, including supernova remnants and shocks in galaxy clusters. Additionally, the simulation code, Gkeyll, and associated analysis scripts are openly available for community use. This award has supported a collaborative effort between Princeton University, the University of Arizona - Tucson, and the University of Maryland - College Park. The award funded three early career scientists, including the funding and training of one female postdoctoral researcher, who was involved in all aspects of the MMS data analysis and some portions of the simulation analysis.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗