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At least 235 records · Page 13

Leveraging public AI tools to explore systems biology resources in mathematical modeling

Predictive mathematical modeling is an essential part of systems biology and is interconnected with information management. Systems biology information is often stored in specialized formats to facilitate data storage and analysis. These formats are not designed for easy human readability and thus require specialized software to visualize and interpret results. Therefore, comprehending modeling and underlying networks and pathways is contingent on mastering systems biology tools, which is particularly challenging for users with no or little background in data science or system biology. To address this challenge, we investigated the usage of public Artificial Intelligence (AI) tools in exploring systems biology resources in mathematical modeling. We tested public AI’s understanding of mathematics in models, related systems biology data, and the complexity of model structures. Our approach can enhance the accessibility of systems biology for non-system biologists and help them understand systems biology without a deep learning curve.

59 BASIC BIOLOGICAL SCIENCES↗

Are there differences in public interest toward automated vehicles’ ownership in burdened and non-burdened communities?

This study examines differences in public interest toward automated vehicle (AV) adoption between burdened communities (BCs) and non-burdened communities (non-BCs). The study uniquely captures travel behavior by integrating the census tract-level community indicators with the 2017–2019 Puget Sound Household Travel Survey. Public interest in AV ownership is modeled as a five-level ordered outcome, ranging from ‘Not interested at all’ to ‘Very interested.’ Segmented ordered logit models and Random Forest are used to identify key drivers and barriers to AV adoption across BCs and non-BCs. Results show that longer commute times, lack of personal vehicles, and concerns about AV performance in adverse weather conditions are significantly associated with higher interest levels toward owning AVs in BCs. In conclusion, the findings offer insights for developing targeted policies to promote AV adoption and address differences between BCs and non-BCs in accessing emerging transportation technologies.

Automated vehicles↗

Coupling Shared E-scooters and Public Transit: A Spatial and Temporal Analysis

The integration of shared e-scooters with public transit is a promising solution for urban mobility's first/last-mile challenge. This study explores spatiotemporal factors influencing this integration, using 35-day e-scooter trip data from Chicago. Employing a random-effect negative binomial approach, we modeled the frequency of e-scooter trips to access/egress to/from bus stops and train stations. Results indicate that weather conditions, design features like intersection density, and multimodal network density significantly influence usage. The transit system characteristics such as service frequency have a positive effect on the integration of e-scooters and trains while a similar effect for bus and e-scooter integration was not significant. Furthermore, safety-related variables such as accident and crime rates as well as demographic characteristics were also revealed to be significant factors in our study. These findings offer vital insights to urban planners and policymakers for infrastructure, safety enhancements, and interventions to encourage efficient e-scooter-public transit integration.

Chicago↗

Air quality and public health co-benefits of 100% renewable electricity adoption and electrification pathways in Los Angeles

To demonstrate how a mega city can lead in decarbonizing beyond legal mandates, the city of Los Angeles (LA) developed science-based, feasible pathways towards utilizing 100% renewable energy for its municipally-owned electric utility. Aside from decarbonization, renewable energy adoption can lead to co-benefits such as improving urban air quality from reductions in combustion-related emissions of oxides of nitrogen (NO x ), primary fine particulate matter (PM 2.5 ) and others. Herein, we quantify changes to air pollutant concentrations and public health from scenarios of 100% renewable electricity adoption in LA in 2045, alongside aggressive electrification of end-use sectors. Our analysis suggests that while ensuring reliable electricity supply, reductions in emissions of air pollutants associated with the 100% renewable electricity scenarios can lead to 8% citywide reductions of PM 2.5 concentration while increasing ozone concentration by 5% relative to a 2012 baseline year, given identical meteorology conditions. The combination of these concentration changes could result in net monetized public health benefits (driven by avoided deaths) of up to $\$$1.4 billion in year 2045 in LA, results potentially replicable for other city-scale decarbonization scenarios.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Integrating Public Health Surveillance and Environmental Data to Model Presence of Histoplasma in the United States

In the United States, the true geographic distribution of the environmental fungus Histoplasma capsulatum remains poorly understood but appears to have changed since it was first characterized. Histoplasmosis is caused by inhalation of the fungus and can range in severity from asymptomatic to life-threatening. Due to limited public health surveillance and under detection of infections, it is challenging to directly use reported case data to characterize spatial risk. Using monthly and yearly county-level public health surveillance data and various environmental and socioeconomic characteristics, we use a spatio-temporal occupancy model to estimate latent, or unobserved, presence of H. capsulatum , accounting for imperfect detection of histoplasmosis cases. We estimate areas with higher probabilities of the presence of H. capsulatum in the East North Central states around the Great Lakes, reflecting a shift of the endemic region to the north from previous estimates. The presence of H. capsulatum was strongly associated with higher soil nitrogen levels. In this investigation, we were able to mitigate challenges related to reporting and illustrate a shift in the endemic region from historical estimates. This work aims to help inform future surveillance needs, clinical awareness, and testing decisions for histoplasmosis.

97 MATHEMATICS AND COMPUTING↗

Customer interviews to improve NASA office of space science education and public outreach leveraging success

Leveraging with organizations that serve our customers and focusing on the needs of those organizations are two prime elements of the NASA Office of Space Science (OSS) Education and Public Outreach (E/PO) Strategy. On behalf of NASA OSS, the Solar System Exploration (SSE) Education and Public Outreach Forum has conducted a series of customer interviews with representatives from leading organizations who serve some of the audiences we wish to reach.

public outreach education↗

Use of the NASA Giovanni Data System for Geospatial Public Health Research: Example of Weather-Influenza Connection

The NASA Giovanni data analysis system has been recognized as a useful tool to access and analyze many different types of remote sensing data. The variety of environmental data types has allowed the use of Giovanni for different application areas, such as agriculture, hydrology, and air quality research. The use of Giovanni for researching connections between public health issues and Earths environment and climate, potentially exacerbated by anthropogenic influence, has been increasingly demonstrated. In this communication, the pertinence of several different data parameters to public health will be described. This communication also provides a case study of the use of remote sensing data from Giovanni in assessing the associations between seasonal influenza and meteorological parameters. In this study, logistic regression was employed with precipitation, temperature and specific humidity as predictors. Specific humidity was found to be associated (p 0.05) with influenza activity in both temperate and tropical climate. In the two temperate locations studied, specific humidity was negatively correlated with influenza; conversely, in the three tropical locations, specific humidity was positively correlated with influenza. Influenza prediction using the regression models showed good agreement with the observed data (correlation coefficient of 0.50.83).

public health↗

Efficient Data Generation and Publication as a Test Tool

A tool to facilitate the generation and publication of test data was created to test the individual components of a command and control system designed to launch spacecraft. Specifically, this tool was built to ensure messages are properly passed between system components. The tool can also be used to test whether the appropriate groups have access (read/write privileges) to the correct messages. The messages passed between system components take the form of unique identifiers with associated values. These identifiers are alphanumeric strings that identify the type of message and the additional parameters that are contained within the message. The values that are passed with the message depend on the identifier. The data generation tool allows for the efficient creation and publication of these messages. A configuration file can be used to set the parameters of the tool and also specify which messages to pass.

command↗

NASA Listening Session on Public Safety Needs for UTM

NASA is working with Industry and FAA to enable beyond visual line of sight (BVLOS) unmanned aerial systems (UAS) operations wherever it is needed. The objective of this presentation is to widen NASA's reach of Public Operator involvement in the UTM BVLOS space. Collaboration between NASA and Public Operations is needed to help define how services can be approved and applied to enable BVLOS operations in the nation's airspace.

UTM↗

UTM Public Operators Outreach: Drone Responders

NASA is working with Industry and FAA to enable beyond visual line of sight (BVLOS) unmanned aerial systems (UAS) operations wherever it is needed. The purpose of this presentation is to widen NASA's reach of Public Operator involvement in the UTM BVLOS space and inform them of the fundamental principles of UTM/BVLOS. Collaboration between NASA and Public Operations is needed to help define how services can be approved and applied to enable BVLOS operations in the nation's airspace.

UTM↗

Evaluating Electric Vehicle Public Charging Utilization in the United States Using the EV WATTS Dataset: Preprint

The utilization of electric vehicle (EV) charging in the United States is a rapidly evolving puzzle further complicated by changes in travel habits brought on by the global COVID-19 pandemic. The EV WATTS dataset is the largest publicly available dataset on the utilization of EV charging in the United States and provides key insights into the changing patterns of public vehicle charging and vehicle use as EV range increases, commute patterns evolve, and more infrastructure becomes available.

ADVANCED PROPULSION SYSTEMS↗

Challenges for monitoring and data analytics in a leadership public data repository

The availability and disposition of data has assumed increasing importance in large-scale computational science. Data repositories are evolving to meet new classes of requirements: compliance with government access guidelines, support for reproducibility of experimental results, and long-term availability of data products. The Constellation public data repository at the Oak Ridge Leadership Computing Facility faces these issues while being situated in one of the most productive data centers in the world. While monitoring and operational data analysis are ingrained in the operation of the OLCF’s large-scale high performance computing platforms, data repositories do not have this history of support. Problems faced by Constellation range from data size (over 7 petabytes in current holdings) to analytic complexity (detailed curation is both absolutely necessary for many data sets and absolutely impossible for humans to accomplish in any practical manner) to deployment environment (OLCF storage resources are oriented toward the needs of the compute platforms). In this paper we describe some of the challenges for collecting monitoring and analytic data from a leadership public data repository. We also discuss various strategies we are pursuing in order to address these challenges, from manual data collection to plans for introducing machine learning-based curatorial techniques.

Widener, Patrick [ORNL] (ORCID:0000000258820816)↗

The impacts of COVID-19 on clean energy labor markets: Evidence from multifaceted analysis of public health interventions and COVID-health factors

COVID-19 pandemic has affected clean energy labor market. Using real-time job vacancy data, this study analyzes the impacts of the pandemic on the U.S. clean energy labor market in 2020, including biomass, energy efficiency (EE), electric vehicle (EV), power/microgrid, solar, and wind industries. This study identifies how COVID-health factors and public health interventions influence clean energy job availability during the early COVID pandemic. Overall, California had the most energy jobs and experienced a significant decrease in April 2020. EV and solar had the highest percentages of job vacancies during the pandemic in general. Still, lockdowns had the most severe influence on EE and wind jobs. Stay-at-home orders negatively affected clean energy job vacancies in biomass, EV, power/microgrid, and wind. Social-gathering restrictions, however, did not have much influence. Increased COVID tests at the state level had the strongest and most positive influence on clean energy job postings, indicating the importance of a state's ability to manage public health infrastructure or crisis issues. COVID hospitalizations negatively influenced the job vacancies in biomass and wind but did not affect the other four sectors; conversely, as COVID death numbers increased, the number of jobs in biomass, EV, power grid, solar, and wind decreased, but not in EE jobs.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Electrifying New York City Ride-Hailing fleets: An examination of the need for public fast charging

This report assesses the scale of public fast charging needed to electrify approximately 20,000 vehicles across the yellow cab and for-hire segments in New York City. The analysis considers real-world trip data in conjunction with driver home locations, overnight charging access rates, driver schedules, and more. Outcomes indicate that the existing charging network in New York City is not adequate even in the most optimistic scenario; 1,054 150-kW ports are required when 15% of drivers have access to overnight charging, whereas 367 150-kW ports are needed when 100% of drivers have access. Results also indicate that although charging is demanded in areas nearby high trip demand, fast charging ports are also demanded in areas near driver residences as a supplement for home charging in scenarios with limited overnight charging access. These findings motivate investment into both overnight charging and public fast charging to meet the charging demands of ride-hailing fleets.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

An Introduction to the Benchmarking and Publications for Non-Targeted Analysis Working Group

Non-targeted analysis (NTA) encompasses a rapidly evolving set of mass spectrometry techniques aimed at characterizing the chemical composition of complex samples, identifying unknown compounds, and/or classifying samples, without prior knowledge regarding the chemical content of the samples. Recent advances in NTA are the result of improved and more accessible instrumentation for data generation, and analysis tools for data evaluation and interpretation. As researchers continue to develop NTA approaches in various scientific fields, there is a growing need to identify, disseminate, and adopt community-wide method reporting guidelines. In 2018, NTA researchers formed the Benchmarking and Publications for Non-Targeted Analysis Working Group (BP4NTA) to address this need. Consisting of participants from around the world and representing fields ranging from environmental science and food chemistry to ‘omics and toxicology, BP4NTA provides resources addressing a variety of challenges associated with NTA. Furthermore, thus far, BP4NTA group members have aimed to establish consensus on NTA-related terms and concepts, and to create consistency in reporting practices by providing resources on a public website, including consensus definitions, reference content, and lists of available tools. Moving forward, BP4NTA will provide a setting for NTA researchers to continue discussing emerging challenges and contribute to additional harmonization efforts.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Reanalysis of Water Withdrawal for Irrigation, Electric Power, and Public Supply Sectors in the Conterminous United States, 1950–2016

Accurately measuring water use by the economy is essential for developing reliable models of water resource availability. Indeed, these models rely on retrospective analyses that provide insights into shifting human population demands and adaptions to water shortages. However, accurate, methodologically consistent, empirically authentic, and spatiotemporally comprehensive historical datasets for water withdrawals are scarce. Herein, we present a reanalysis of annual resolution (1950–2016) historical data set on irrigation, electric power, and public supply water withdrawal within the conterminous United States (US) at the county-level, and, for power plants, at the site-level. To estimate electric power water use, we synthesized a historically comprehensive list of generators and historic patterns in generation across fuels, prime movers, and cooling technologies. Irrigation water use estimation required building a crop-demand model that utilized historical information on irrigated acreage for crops and golf courses, stage-specific crop water demand, and climate information. To estimate public water supply use, we developed a random forest model constructed from information on population, infrastructure, climate, and land cover. These estimates generally agree with total county and state water use information provided by the US Geological Survey (USGS) water use circular and estimates generated from independent studies for specific years. However, we also observed discrepancies between our estimates and USGS data that appear to be caused by inconsistencies in the methods used by the USGS's primary data sources at the state level over decades of data collection, highlighting the importance of reanalysis to yield spatiotemporally consistent and intercomparable estimates of water use.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Enabling pan-repository reanalysis for big data science of public metabolomics data

Public untargeted metabolomics data is a growing resource for metabolite and phenotype discovery; however, accessing and utilizing these data across repositories pose significant challenges. Therefore, here we develop pan-repository universal identifiers and harmonized cross-repository metadata. This ecosystem facilitates discovery by integrating diverse data sources from public repositories including MetaboLights, Metabolomics Workbench, and GNPS/MassIVE. Our approach simplified data handling and unlocks previously inaccessible reanalysis workflows, fostering unmatched research opportunities.

El Abiead, Yasin↗

Publication of the Belle II Software

The Belle II software was developed by a few hundred individual contributors over several years. Following the rising desire of making it publicly available, the collaboration established open source software policies and procedures. The political and technical challenges and their solutions at Belle II are discussed in this article. With the publication of the Belle II software, basf2, on GitHub and Zenodo in 2021 an important milestone towards open science was reached.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗