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At least 235 records · Page 13

The expression and function of the achaete-scute genes in Tribolium castaneum reveals conservation and variation in neural pattern formation and cell fate specification

The study of achaete-scute (ac/sc) genes has recently become a paradigm to understand the evolution and development of the arthropod nervous system. We describe the identification and characterization of the ac/sc genes in the coleopteran insect species Tribolium castaneum. We have identified two Tribolium ac/sc genes - achaete-scute homolog (Tc-ASH) a proneural gene and asense (Tc-ase) a neural precursor gene that reside in a gene complex. Focusing on the embryonic central nervous system we find that Tc-ASH is expressed in all neural precursors and the proneural clusters from which they segregate. Through RNAi and misexpression studies we show that Tc-ASH is necessary for neural precursor formation in Tribolium and sufficient for neural precursor formation in Drosophila. Comparison of the function of the Drosophila and Tribolium proneural ac/sc genes suggests that in the Drosophila lineage these genes have maintained their ancestral function in neural precursor formation and have acquired a new role in the fate specification of individual neural precursors. Furthermore, we find that Tc-ase is expressed in all neural precursors suggesting an important and conserved role for asense genes in insect nervous system development. Our analysis of the Tribolium ac/sc genes indicates significant plasticity in gene number, expression and function, and implicates these modifications in the evolution of arthropod neural development.

Non-NASA Center↗

BOREAS AFM-12 1-km AVHRR Seasonal Land Cover Classification

The Boreal Ecosystem-Atmosphere Study (BOREAS) Airborne Fluxes and Meteorology (AFM)-12 team's efforts focused on regional scale Surface Vegetation and Atmosphere (SVAT) modeling to improve parameterization of the heterogeneous BOREAS landscape for use in larger scale Global Circulation Models (GCMs). This regional land cover data set was developed as part of a multitemporal one-kilometer Advanced Very High Resolution Radiometer (AVHRR) land cover analysis approach that was used as the basis for regional land cover mapping, fire disturbance-regeneration, and multiresolution land cover scaling studies in the boreal forest ecosystem of central Canada. This land cover classification was derived by using regional field observations from ground and low-level aircraft transits to analyze spectral-temporal clusters that were derived from an unsupervised cluster analysis of monthly Normalized Difference Vegetation Index (NDVI) image composites (April-September 1992). This regional data set was developed for use by BOREAS investigators, especially those involved in simulation modeling, remote sensing algorithm development, and aircraft flux studies. Based on regional field data verification, this multitemporal one-kilometer AVHRR land cover mapping approach was effective in characterizing the biome-level land cover structure, embedded spatially heterogeneous landscape patterns, and other types of key land cover information of interest to BOREAS modelers.The land cover mosaics in this classification include: (1) wet conifer mosaic (low, medium, and high tree stand density), (2) mixed coniferous-deciduous forest (80% coniferous, codominant, and 80% deciduous), (3) recent visible bum, vegetation regeneration, or rock outcrops-bare ground-sparsely vegetated slow regeneration bum (four classes), (4) open water and grassland marshes, and (5) general agricultural land use/ grasslands (three classes). This land cover mapping approach did not detect small subpixel-scale landscape features such as fens, bogs, and small water bodies. Field observations and comparisons with Landsat Thematic Mapper (TM) suggest a minimum effective resolution of these land cover classes in the range of three to four kilometers, in part, because of the daily to monthly compositing process. In general, potential accuracy limitations are mitigated by the use of conservative parameterization rules such as aggregation of predominant land cover classes within minimum horizontal grid cell sizes of ten kilometers. The AFM-12 one-kilometer AVHRR seasonal land cover classification data are available from the Earth Observing System Data and Information System (EOSDIS) Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC). The data files are available on a CD-ROM (see document number 20010000884).

Steyaert, Lou↗

The Expression and Function of the Achaete-Scute Genes in Tribolium castaneum Reveals Conservation and Variation in Neural Pattern Formation and Cell Fate Specification

SUMMARY The study of achaete-scute (ac/sc) genes has recently become a paradigm to understand the evolution and development of the arthropod nervous system. We describe the identification and characterization of the ache genes in the coleopteran insect species Tribolium castaneum. We have identified two Tribolium ache genes - achaete-scute homolog (Tc-ASH) a proneural gene and asense (Tc-ase) a neural precursor gene that reside in a gene complex. Focusing on the embryonic central nervous system we fmd that Tc-ASH is expressed in all neural precursors and the proneural clusters from which they segregate. Through RNAi and misexpression studies we show that Tc-ASH is necessary for neural precursor formation in Triboliurn and sufficient for neural precursor formation in Drosophila. Comparison of the function of the Drosophila and Triboliurn proneural ac/sc genes suggests that in the Drosophila lineage these genes have maintained their ancestral function in neural precursor formation and have acquired a new role in the fate specification of individual neural precursors. Furthermore, we find that Tc-use is expressed in all neural precursors suggesting an important and conserved role for asense genes in insect nervous system development. Our analysis of the Triboliurn ache genes indicates significant plasticity in gene number, expression and function, and implicates these modifications in the evolution of arthropod neural development.

Wheeler, Scott R.↗

Earth Science Data Analytics: Preparing for Extracting Knowledge from Information

Data analytics is the process of examining large amounts of data of a variety of types to uncover hidden patterns, unknown correlations and other useful information. Data analytics is a broad term that includes data analysis, as well as an understanding of the cognitive processes an analyst uses to understand problems and explore data in meaningful ways. Analytics also include data extraction, transformation, and reduction, utilizing specific tools, techniques, and methods. Turning to data science, definitions of data science sound very similar to those of data analytics (which leads to a lot of the confusion between the two). But the skills needed for both, co-analyzing large amounts of heterogeneous data, understanding and utilizing relevant tools and techniques, and subject matter expertise, although similar, serve different purposes. Data Analytics takes on a practitioners approach to applying expertise and skills to solve issues and gain subject knowledge. Data Science, is more theoretical (research in itself) in nature, providing strategic actionable insights and new innovative methodologies. Earth Science Data Analytics (ESDA) is the process of examining, preparing, reducing, and analyzing large amounts of spatial (multi-dimensional), temporal, or spectral data using a variety of data types to uncover patterns, correlations and other information, to better understand our Earth. The large variety of datasets (temporal spatial differences, data types, formats, etc.) invite the need for data analytics skills that understand the science domain, and data preparation, reduction, and analysis techniques, from a practitioners point of view. The application of these skills to ESDA is the focus of this presentation. The Earth Science Information Partners (ESIP) Federation Earth Science Data Analytics (ESDA) Cluster was created in recognition of the practical need to facilitate the co-analysis of large amounts of data and information for Earth science. Thus, from a to advance science point of view: On the continuum of ever evolving data management systems, we need to understand and develop ways that allow for the variety of data relationships to be examined, and information to be manipulated, such that knowledge can be enhanced, to facilitate science. Recognizing the importance and potential impacts of the unlimited ways to co-analyze heterogeneous datasets, now and especially in the future, one of the objectives of the ESDA cluster is to facilitate the preparation of individuals to understand and apply needed skills to Earth science data analytics. Pinpointing and communicating the needed skills and expertise is new, and not easy. Information technology is just beginning to provide the tools for advancing the analysis of heterogeneous datasets in a big way, thus, providing opportunity to discover unobvious scientific relationships, previously invisible to the science eye. And it is not easy It takes individuals, or teams of individuals, with just the right combination of skills to understand the data and develop the methods to glean knowledge out of data and information. In addition, whereas definitions of data science and big data are (more or less) available (summarized in Reference 5), Earth science data analytics is virtually ignored in the literature, (barring a few excellent sources).

data analytics↗

Mars Ground Level Enhancements in the Context of the Solar Energetic Particle Clock

In this work we discuss the growing ensemble of solar particle events registered on the Martian surface, including their temporal appearance and solar sources. Solar energetic particle events from the surface of Mars have been observed starting soon after the August 2012 landing of the Radiation Assessment Detector onboard Curiosity. The Martian atmosphere prevents protons and heavy ions of up to 180 MeV/n kinetic energy from directly reaching the Martian surface. This cut-off is high enough to limit the number of solar energetic particle events measured on the surface to only 15 in ~12 ½ years. Yet we find in this analysis that Mars ground level enhancements follow the distinct SEP clock pattern as proton events observed at lower energies as reported in Posner, Richardson and Strauss (2024). Proton acceleration occurs predominantly near the solar surface, while transport to Mars incurs a delay in onset, and, as we show here, peak, that is a function of the longitudinal magnetic connection distance. between the foot point of solar wind magnetic field lines that intersect the Mars environment with the source longitude of the solar magnetic eruption. A distinct clustering of relative solar source locations at or near the Mars foot points at the Sun’s western limb is apparent, indicating lower flux thresholds from such preferred locations. Our findings have implications for astronaut safety at Mars.

Mars Ground Level Enhancements↗

Testing approximations for non-linear gravitational clustering

The accuracy of various analytic approximations for following the evolution of cosmological density fluctuations into the nonlinear regime is investigated. The Zel'dovich approximation is found to be consistently the best approximation scheme. It is extremely accurate for power spectra characterized by n = -1 or less; when the approximation is 'enhanced' by truncating highly nonlinear Fourier modes the approximation is excellent even for n = +1. The performance of linear theory is less spectrum-dependent, but this approximation is less accurate than the Zel'dovich one for all cases because of the failure to treat dynamics. The lognormal approximation generally provides a very poor fit to the spatial pattern.

Coles, Peter↗

Global Disease Outbreaks Associated with the 2015-2016 El Niño Event

Interannual climate variability patterns associated with the El Niño-Southern Oscillation phenomenon result in climate and environmental anomaly conditions in specific regions worldwide that directly favor outbreaks and/or amplification of variety of diseases of public health concern including chikungunya, hantavirus, Rift Valley fever, cholera, plague, and Zika. We analyzed patterns of some disease outbreaks during the strong 2015–2016 El Niño event in relation to climate anomalies derived from satellite measurements. Disease outbreaks in multiple El Niño-connected regions worldwide (including Southeast Asia, Tanzania, western US, and Brazil) followed shifts in rainfall, temperature, and vegetation in which both drought and flooding occurred in excess (14–81% precipitation departures from normal). These shifts favored ecological conditions appropriate for pathogens and their vectors to emerge and propagate clusters of diseases activity in these regions. Our analysis indicates that intensity of disease activity in some ENSO-teleconnected regions were approximately 2.5–28% higher during years with El Niño events than those without. Plague in Colorado and New Mexico as well as cholera in Tanzania were significantly associated with above normal rainfall (p < 0.05); while dengue in Brazil and southeast Asia were significantly associated with above normal land surface temperature (p < 0.05). Routine and ongoing global satellite monitoring of key climate variable anomalies calibrated to specific regions could identify regions at risk for emergence and propagation of disease vectors. Such information can provide sufficient lead-time for outbreak prevention and potentially reduce the burden and spread of ecologically coupled diseases.

El Nino↗

Venus global radar reflectivity and correlations with elevation

A geological analysis of the global radar reflectivity data for Venus is presented. The statistical and map pattern distribution of the radar reflectivity rho is first analyzed in the context of the porosity structure of the surface. Rho is then correlated with elevation in order to examine the degree of topographic control on material properties which could depend on PT-sensitive chemical weathering phenomena. Comparison of the rms slope alpha and rho correlations with elevation demonstrates that there are distinct topographic zones defined on the basis of the rho and alpha trends. Finally, hierarchical clustering analysis is applied to the global rho, alpha, and 100-km baseline regional slope data sets in order to define radar property-related subregions.

Garvin, J. B.↗

Transonic Navier-Stokes solutions for a fighter-like configuration

The Transonic Navier-Stokes wing code is extended to a 16-zone TNS wing-fuselage code and used to solve the transonic viscous flow over a modified F-16A. The computer code, called Transonic Navier-Stokes Wing/Fuselage uses a zonal approach to solve the three-dimensional Euler and Navier-Stokes equations. With the zonal implementation, clustering suitable for viscous calculations is achieved on all solid surfaces. The transonic case has flow conditions of free-stream M = 0.9, alpha = 4.12 deg, and a Reynolds number based on root chord of 4.5 million. This case required about 3,000 iterations to reduce the L2-norm of the residual by three orders, which takes about 15 hr of cpu time on the Cray X-MP/48 processor. Pressure distributions, as well as separaton patterns, compare favorably with experiment for this transonic case.

Flores, Jolen↗

Trajectory Design Considerations for Exploration Mission 1

Exploration Mission 1 (EM-1) will be the first mission to send an uncrewed Orion Multi-Purpose Crew Vehicle (MPCV) to cislunar space in the fall of 2019. EM-1 was originally conceived as a lunar free-return mission, but was later changed to a Distant Retrograde Orbit (DRO) mission as a precursor to the Asteroid Redirect Mission. To understand the required mission performance (i.e., propellant requirement), a series of trajectory optimization runs was conducted using JSC's Copernicus spacecraft trajectory optimization tool. In order for the runs to be done in a timely manner, it was necessary to employ a parallelization approach on a computing cluster using a new trajectory scan tool written in Python. Details of the scan tool are provided and how it is used to perform the scans and post-process the results. Initially, a scan of daily due east launched EM-1 DRO missions in 2018 was made. Valid mission opportunities are ones that do not exceed the useable propellant available to perform the required burns. The initial scan data showed the propellant and delta-V performance patterns for each launch period. As questions were raised from different subsystems (e.g., power, thermal, communications, flight operations, etc.), the mission parameters or data that were of interest to them were added to the scan output data file. The additional data includes: (1) local launch and landing times in relation to sunrise and sunset, (2) length of eclipse periods during the in-space portion of the mission, (3) Earth line of sight from cislunar space, (4) Deep Space Network field of view looking towards cislunar space, and (5) variation of the downrange distance from Earth entry interface to splashdown. Mission design trades can also be performed based on the information that the additional data shows. For example, if the landing is in darkness, but the recovery operations team desires a landing in daylight, then an analysis is performed to determine how to change the mission design to meet this request. Also, subsystems request feasibility of alternate or contingency mission designs, such as adding an Orion main engine checkout burn or Orion completing all of its burns using only its auxiliary thrusters. This paper examines and presents the evolving trade studies that incorporate subsystem feedback and demonstrate the feasibility of these constrained mission trajectory designs and contingencies.

Dawn, Timothy F.↗

/Ar-40/-/Ar-39/ dating of Apollo 16 and 17 rocks

The reported study is a continuation of an investigation begun by Alexander and Kahl (1974), with primary emphasis on (Ar-40)-(Ar-39) dating of lunar breccias. A primary objective of the study was related to the resolution of small plateau-age differences between Apollo 16 and 17 samples which have been irradiated in the same irradiation. This objective was not realized because (1) neither of the considered Apollo 16 samples has a well-defined plateau, and (2) the release patterns of the two Apollo 17 samples with plateaux (73235 and 77017) are sufficiently complex to suggest caution in interpretation of fine-scale differences among apparent ages. The plateau age of 73235 agrees well with plateau ages measured for a nearby boulder at the South Massif. The plateau age of 77017, on the other hand, agrees well with plateau ages measured in an nearby boulder at the base of the North Massif. These rock and boulder ages are tightly clustered about 3.99 b.y., and this clustering suggests that the North and South Massifs were made in the same basin-forming event, presumably Serenitatis.

Phinney, D.↗

Metric-discontinuous zonal grid calculations using the Osher scheme

Computations on zonal grids - in particular, grids with metric discontinuities resulting from the interspersion of highly clustered regions with coarse regions - are possible using a fully conservative form of the Osher upwind scheme. These zonal grids can result from an abrupt clustering of points near solution discontinuities or near other flow features that require improved resolution. The zonal approach is shown to capture shocks with almost 'shock-fitting' quality but with minimal effort. Results for inviscid flow, including quasi-one-dimensional nozzle flow, supersonic flow over a cylinder, and blast-wave diffraction by a ramp, are presented. These calculations demonstrate the powerful capabilities of the Osher scheme used in conjunction with zonal grids in simulating flow fields with complex shock patterns.

Rai, M. M.↗

Comparison of the LEW88516 and ALHA77005 martian meteorites: Similar but distinct

By mineral and bulk compositions, the Lewis Cliff (LEW) 88516 meteorite is quite similar to the ALHA77005 martian meteorite. These two meteorites are not paired because their mineral compositions are distinct, they were found 500 km apart in ice fields with different sources for meteorites, and their terrestrial residence ages are different. Minerals in LEW88516 include: olivine, pyroxenes (low- and high-Ca), and maskelynite (ater plagioclase); and the minor minerals chromite, whitlockite, ilmenite, and pyrrhotite. Mineral grains in LEW88516 range up to a few mm. Texturally, the meteorite is complex, with regions of olivine and chromite poikilitically enclosed in pyroxene, regions of interstitial basaltic texture, and glass-rich (shock) veinlets. Olivine compositions range from Fo(sub 64) to Fo(sub 70), (avg. Fo(sub 67)), more ferroan and with more variation than in ALHA77005 (Fo(sub 69) to Fo(sub 73)). Pyroxene compositions fall between En(sub 77)Wo(sub 4) and En(sub 65)Wo(sub 15) and in clusters near En(sub 63)Wo(sub 9) and En(sub 53)Wo(sub 33), on average more magnesian and with more variation than in ALHA77005. Shock features in LEW88516 range from weak deformation through complete melting. Bulk chemical analyses by modal recombination of electron microprobe analyses, instrumental neutron activation, and radiochemical neutron activation confirm that LEW88516 is more closely related to ALHA77005 than to other known martian meteorites. Key element abundance ratios are typical of martian meteorites, as is it nonchondritic rare earth pattern. Differences between the chemical compositions of LEW88516 and ALHA77005 are consistent with slight differences in the proportions of their constituent minerals and not from fundamental petrogenetic differences. Noble gas abundances in LEW88516, like those in ALHA77005, show modest excesses of Ar-40 and Xe-129 from trapped (shock-implanted) gas. As with other ALHA77005 and the shergottite martian meteorites (except EETA79001), noble gas isotope abundances in LEW88516 are consistent with exposure to cosmic rays for 2.5-3 Ma. The absence of substantial effects of shielding from cosmic rays suggest LEW88516 spent this time as an object no larger than a few cm in diameter.

Treiman, A. H.↗

Cosmic-Ray-Exposure Ages of Diogenites and the Collisional History of the HED Parent Body or Bodies

Cosmic-ray-exposure ages of meteorites provide information on the collisional history of their parent bodies and the delivery mechanism of meteorites to Earth. The exposure-age distributions of ordinary chondrites show distinct patterns for H, L, and LL types, consistent with their origin on different parent bodies. The exposure-age distributions of howardites, eucrites. and diogenites (HEDS) show a common pattern with major peaks at 22 Ma and 38 Ma This provides additional evidence for a common origin of the HED meteorites, possibly 4 Vesta, although orbital dynamics calculations showed that the delivery of meteorites from Vesta to Earth is difficult. However, the discovery of several kilometer-sized Vesta-like asteroids in the region between Vesta and the 3:1 resonance suggested that these seem more likely parent bodies of the HEDs than Vesta itself. This implies that the exposure-age clusters may represent samples of several parent bodies. Therefore, the near-absence of diogenites with ages <20 Ma might be of interest for the composition of these kilometer-sized fragments of Vesta. Here we present cosmic-ray-exposure ages of 20 diogenites, including 9 new meteorites. In addition, we calculate the probability for each peak to occur by chance, assuming a constant production rate of HED fragments.

Welten, K. C.↗

Leiomodin and tropomodulin in smooth muscle

Evidence is accumulating to suggest that actin filament remodeling is critical for smooth muscle contraction, which implicates actin filament ends as important sites for regulation of contraction. Tropomodulin (Tmod) and smooth muscle leiomodin (SM-Lmod) have been found in many tissues containing smooth muscle by protein immunoblot and immunofluorescence microscopy. Both proteins cofractionate with tropomyosin in the Triton-insoluble cytoskeleton of rabbit stomach smooth muscle and are solubilized by high salt. SM-Lmod binds muscle tropomyosin, a biochemical activity characteristic of Tmod proteins. SM-Lmod staining is present along the length of actin filaments in rat intestinal smooth muscle, while Tmod stains in a punctate pattern distinct from that of actin filaments or the dense body marker alpha-actinin. After smooth muscle is hypercontracted by treatment with 10 mM Ca(2+), both SM-Lmod and Tmod are found near alpha-actinin at the periphery of actin-rich contraction bands. These data suggest that SM-Lmod is a novel component of the smooth muscle actin cytoskeleton and, furthermore, that the pointed ends of actin filaments in smooth muscle may be capped by Tmod in localized clusters.

Carrier Proteins/analysis/genetics/metabolism↗

Profile analysis of after-effects experienced during exposure to several virtual reality environments

Motion sickness symptoms are an unwanted by-product of exposure to virtual environments. This problem is not new and was reported in the early flight simulators and experiments on ego motions and vection. The cardinal symptom of motion sickness is, of course, vomiting, but this symptom is ordinarily preceded by a variety of other symptoms. In his classic studies of motion sickness conducted before and during World War II, G. R. Wendt introduced a three point scale to score motion sickness beyond a vomit/no vomit dichotomy. Later, Navy scientists developed a Motion Sickness Questionnaire (MSQ), originally for use in a slowly rotating room. In the last 20 years the MSQ has been used in a series of studies of air, sea, and space sickness. Only recently, however, has it been appreciated that symptom patterns in the MSQ are not uniform but vary with the way sickness is induced. In seasickness, for example, nausea is the most prominent symptom. In Navy simulators, however, the most common symptom is eye strain, especially when cathode ray tubes are employed in the simulation. The latter result was obtained in a survey of over 1,500 pilot exposures. Using this database, Essex scientists conducted a factor analysis of the MSQ. We found that signs and symptoms of motion sickness fell mainly into three clusters: 1) oculomotor disturbance, 2) nausea and related neurovegetative problems, and 3) disorientation, ataxia, and vertigo. We have since rescored the MSQ results obtained in Navy simulators in terms of these three components. We have also compared these and other profiles obtained from three different vitual reality systems to profiles obtained in sea sickness, space sickness, and alcohol intoxication. We will show examples of these various profiles and point out simularities and differences among them which indicate aspects of what might be called 'virtual-reality sickness'.

Kennedy, Robert S.↗

Digital processing of satellite imagery application to jungle areas of Peru

The author has identified the following significant results. The use of clustering methods permits the development of relatively fast classification algorithms that could be implemented in an inexpensive computer system with limited amount of memory. Analysis of CCTs using these techniques can provide a great deal of detail permitting the use of the maximum resolution of LANDSAT imagery. Potential cases were detected in which the use of other techniques for classification using a Gaussian approximation for the distribution functions can be used with advantage. For jungle areas, channels 5 and 7 can provide enough information to delineate drainage patterns, swamp and wet areas, and make a reasonable broad classification of forest types.

Pomalaza, J. C.↗

Turbulence in a Global Magnetohydrodynamic Simulation of the Earth's Magnetosphere during Northward and Southward Interplanetary Magnetic Field

We report the results of MHD simulations of Earth's magnetosphere for idealized steady solar wind plasma and interplanetary magnetic field (IMF) conditions. The simulations feature purely northward and southward magnetic fields and were designed to study turbulence in the magnetotail plasma sheet. We found that the power spectral densities (PSDs) for both northward and southward IMF had the characteristics of turbulent flow. In both cases, the PSDs showed the three scale ranges expected from theory: the energy-containing scale, the inertial range, and the dissipative range. The results were generally consistent with in-situ observations and theoretical predictions. While the two cases studied, northward and southward IMF, had some similar characteristics, there were significant differences as well. For southward IMF, localized reconnection was the main energy source for the turbulence. For northward IMF, remnant reconnection contributed to driving the turbulence. Boundary waves may also have contributed. In both cases, the PSD slopes had spatial distributions in the dissipative range that reflected the pattern of resistive dissipation. For southward IMF there was a trend toward steeper slopes in the dissipative range with distance down the tail. For northward IMF there was a marked dusk-dawn asymmetry with steeper slopes on the dusk side of the tail. The inertial scale PSDs had a dusk-dawn symmetry during the northward IMF interval with steeper slopes on the dawn side. This asymmetry was not found in the distribution of inertial range slopes for southward IMF. The inertial range PSD slopes were clustered around values close to the theoretical expectation for both northward and southward IMF. In the dissipative range, however, the slopes were broadly distributed and the median values were significantly different, consistent with a different distribution of resistivity.

magnetohydrodynamics (MHD)↗