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At least 235 records · Page 13

The helix⁻inversion mechanism in double₋stranded helical oligomers bridged by rotary cyclic boronate esters

Attracted by the numerous regulatory functions of double-helical biopolymers such as DNA, many researchers have synthesized various double-helical systems. A recently synthesized double-stranded helical oligomer covalently bridged by rotary boronate esters (BBDD) was shown to undergo helix-inversion that might serve as platform to design rotor systems. Yet, the detailed helix-inversion mechanism could not be investigated experimentally. Direct molecular dynamics simulations based on density-functional tight-binding energies and gradients computed on-the-fly reveal that disentanglement to the unraveled form and following exchange of the twisted terminal trimethylsilyl (TMS) groups are prerequisites for the observed helix-inversion. The possibility of mean force confirms that the originally assumed “concurrent” rotation of the boronate esters and the helix-inversion involves shorter time scale “step-wise” processes, triggered by the disentanglement and exchange of the TMS groups. These results suggest that inversion dynamics of double-helical molecules such as BBDD may be controllable by chemical fine-tuning of the terminal groups.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Quantum correlations of helicity entangled states in non-inertial frames beyond single mode approximation

A helicity entangled tripartite state is considered in which the degree of entanglement is preserved in non-inertial frames. It is shown that Quantum Entanglement remains observer independent. As another measure of quantum correlation, Quantum Discord has been investigated. It is explicitly shown that acceleration has no effect on the degree of quantum correlation for the bipartite and tripartite helicity entangled states. Geometric Quantum Discord as a Hilbert–Schmidt distance is computed for helicity entangled states. It is shown that living in non-inertial frames does not make any influence on this distance, either. In addition, the analysis has been extended beyond single mode approximation to show that acceleration does not have any impact on the quantum features in the limit beyond the single mode. As an interesting result, while the density matrix depends on the right and left Unruh modes, the Negativity as a measure of Quantum Entanglement remains constant. Also, Quantum Discord does not change beyond single mode approximation. - Highlights: • The helicity entangled states here are observer independent in non-inertial frames. • It is explicitly shown that Quantum Discord for these states is observer independent. • Geometric Quantum Discord is also not affected by acceleration increase. • Extending to beyond single mode does not change the degree of entanglement. • Beyond single mode approximation the degree of Quantum Discord is also preserved.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Solution of the Schrödinger equation for quasi-one-dimensional materials using helical waves

We formulate and implement a spectral method for solving the Schrödinger equation, as it applies to quasi-one-dimensional materials and structures. This allows for computation of the electronic structure of important technological materials such as nanotubes (of arbitrary chirality), nanowires, nanoribbons, chiral nanoassemblies, nanosprings and nanocoils, in an accurate, efficient and systematic manner. Our work is motivated by the observation that one of the most successful methods for carrying out electronic structure calculations of bulk/crystalline systems — the plane-wave method — is a spectral method based on eigenfunction expansion. Our scheme avoids computationally onerous approximations involving periodic supercells often employed in conventional plane-wave calculations of quasi-one-dimensional materials, and also overcomes several limitations of other discretization strategies, e.g., those based on finite differences and atomic orbitals. The basis functions in our method — called helical waves (or twisted waves) — are eigenfunctions of the Laplacian with symmetry adapted boundary conditions, and are expressible in terms of plane waves and Bessel functions in helical coordinates. We describe the setup of fast transforms to carry out discretization of the governing equations using our basis set, and the use of matrix-free iterative diagonalization to obtain the electronic eigenstates. Miscellaneous computational details, including the choice of eigensolvers, use of a preconditioning scheme, evaluation of oscillatory radial integrals and the imposition of a kinetic energy cutoff are discussed. We have implemented these strategies into a computational package called HelicES (Helical Electronic Structure). We demonstrate the utility of our method in carrying out systematic electronic structure calculations of various quasi-one-dimensional materials through numerous examples involving nanotubes, nanoribbons and nanowires. We also explore the convergence properties of our method, and assess its accuracy and computational efficiency by comparison against reference finite difference, transfer matrix method and plane-wave results. We anticipate that our method will find applications in computational nanomechanics and multiscale modeling, for carrying out transport calculations of interest to the field of semiconductor devices, and for the discovery of novel chiral phases of matter that are of relevance to the burgeoning quantum hardware industry.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Formation of helices with controllable chirality in gel-fiber composites

While microscale helices with specified chirality are pervasive in biological systems, driving purely synthetic materials to self-organize into such useful structures remains a significant challenge. Through theory and simulations, we model the behavior of initially flat ribbons of gel-fiber composites and show that these materials self-organize into three-dimensional helices with the application of heat. We specifically focus on thermo-responsive gels, which shrink when heated to a point near the lower critical solubility temperature (LCST). Within the composite, regions of the LCST gel that lie far from the fibers can readily shrink in response to the increased temperature; however, near the fibers the network is inhibited from undergoing the heat-induced collapse. This competition between the constrained and the unconstrained regions of the heated sample plays a vital role in the structural evolution of the material. Additionally, we find that this dynamic process can be controlled through the careful placement of the fibers on the outer surface of the gel. We specifically identify fiber arrangements that lead to the formation of helical structures with controlled chirality. Moreover, we isolate scenarios where constraining the movement of one or both the free ends of the sample promotes and stabilizes the formation of helical structures with specified handedness. Such structurally tailored composites are useful for creating mechanically robust actuators, and “appendages” for soft robots that can controllably curl and uncurl with variations in temperature.

36 MATERIALS SCIENCE↗

Electric Field Control of Magnetic Skyrmion Helicity in a Centrosymmetric 2D van der Waals Magnet

Two-dimensional van der Waals magnets hosting topological magnetic textures, such as skyrmions, show promise for spintronics and quantum computing. Electrical control of these topological spin textures is crucial for enhancing operational performance and functionality. Here, using electron microscopy combined with in situ electric and magnetic biasing, we show that the skyrmion helicity in insulating Cr 2 Ge 2 Te 6 can be controlled by the direction of the external electric field applied during the field cooling process. The electric field-tuned helicity remains stable at low temperature, even amid variations in magnetic and electric fields. Our theoretical investigation reveals that nonzero Dzyaloshinskii-Moriya interactions between nearest neighbors, induced by the electric field, change their sign upon reversing the electric field direction, thereby facilitating helicity selection. The electrical control of magnetic helicity demonstrated in this study can be extended to other centrosymmetric skyrmion-hosting magnets, paving the way for future device designs in topological spintronics and quantum computing.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Magnetic helicity signature produced by cross-field 2D turbulence

Hybrid numerical simulations of freely decaying 2D turbulence are presented. The background magnetic field is perpendicular to the simulation plane, which eliminates linear kinetic Alfven waves from the system. The normalized magnetic helicity of the initial large-scale fluctuations is zero, while the normalized cross-helicity is not. As the turbulence evolves, it develops nonzero magnetic helicity at smaller scales, in the proton kinetic range. In the quasi-steady state of evolution, the magnetic helicity spectrum has a peak consistent with the solar wind observations.

79 ASTRONOMY AND ASTROPHYSICS↗

Validation of single-fluid and two-fluid magnetohydrodynamic models of the helicity injected torus spheromak experiment with the NIMROD code

We present a comparison study of 3-D pressureless resistive MHD (rMHD) and 3-D presureless two-fluid MHD models of the Helicity Injected Torus with Steady Inductive helicity injection (HIT-SI). HIT-SI is a current drive experiment that uses two geometrically asymmetric helicity injectors to generate and sustain toroidal plasmas. The comparable size of the collisionless ion skin depth d{sub i} to the resistive skin depth predicates the importance of the Hall term for HIT-SI. The simulations are run with NIMROD, an initial-value, 3-D extended MHD code. The modeled plasma density and temperature are assumed uniform and constant. The helicity injectors are modeled as oscillating normal magnetic and parallel electric field boundary conditions. The simulations use parameters that closely match those of the experiment. The simulation output is compared to the formation time, plasma current, and internal and surface magnetic fields. Results of the study indicate 2fl-MHD shows quantitative agreement with the experiment while rMHD only captures the qualitative features. The validity of each model is assessed based on how accurately it reproduces the global quantities as well as the temporal and spatial dependence of the measured magnetic fields. 2fl-MHD produces the current amplification (I{sub tor}/I{sub inj}) and formation time τ{sub f} demonstrated by HIT-SI with similar internal magnetic fields. rMHD underestimates (I{sub tor}/I{sub inj}) and exhibits much a longer τ{sub f}. Biorthogonal decomposition (BD), a powerful mathematical tool for reducing large data sets, is employed to quantify how well the simulations reproduce the measured surface magnetic fields without resorting to a probe-by-probe comparison. BD shows that 2fl-MHD captures the dominant surface magnetic structures and the temporal behavior of these features better than rMHD.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Resistive magnetohydrodynamic simulations of helicity-injected startup plasmas in National Spherical Torus eXperiment

The generation of helicity-injected startup plasmas in National Spherical Torus eXperiment (NSTX), including flux surface closure, is studied using resistive-magnetohydrodynamic simulations with plasma flows, currents, ohmic heating and anisotropic thermal conduction. An injection-voltage pulse shape is used that separates the injection and closure phases allowing elucidation of the physics. The formation of an X-point near the helicity-injection gap is triggered as the injector voltage drops to zero. Near the forming X-point, magnetic pressure due to toroidal field entrained in the E × B plasma flow from the helicity-injection gap drops, allowing resistive magnetic reconnection even though the total injected current is almost constant. Where appropriate, the simulations are compared with Transient Coaxial Helicity Injection experiments in the NSTX spherical tokamak, which have demonstrated the formation of a promising candidate for non-inductive startup plasmas [Raman et al., Phys. Rev. Lett. 90, 075005 (2003)].

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

SIMULATIONS OF TURBULENT DYNAMOS DRIVEN BY THE MAGNETIC HELICITY FLUX

We present results of numerical simulations of driven magnetohydrodynamic turbulence in a periodic box with an imposed large-scale sinusoidal shear. We produce strong large-scale magnetic fields through dynamo action. This dynamo action is highly dependent on the spectral properties of the forcing function. In particular, we can produce either dynamo or antidynamo action by choosing particular forcing functions for the small-scale turbulence. Our results show that the large-scale electromotive force is well correlated with the local accumulation of eddy-scale magnetic helicity. Conversely, the electromotive force is very weakly correlated with the large-scale magnetic field strength or its product with kinetic helicity. We argue that in these simulations large-scale dynamo action is driven by an inverse cascade of magnetic helicity, ultimately caused by the tendency of anisotropic turbulence to create a magnetic helicity flux.

79 ASTRONOMY AND ASTROPHYSICS↗

MAGNETIC RECONNECTION, HELICITY DYNAMICS, AND HYPER-DIFFUSION

We examine the influence of noise and Alfven wave turbulence on magnetic reconnection in a reduced magnetohydrodynamics model. We focus on the dynamics of magnetic helicity density. Helicity conservation is then used to calculate the global reconnection rate in terms of the helicity density flux. Two specific scenarios are explored-noisy reconnection and Alfven wave turbulent reconnection. For noisy reconnection, the current sheet is assumed to sit in a noisy state, marginal to plasmoid formation instability. The scaling of the reconnection rate in the presence of noise is proportional to (S {sup 2}{sub 0}/V{sub A}L {sup 2}){sup 1/11}, where S {sup 2}{sub 0}/V{sub A}L {sup 2} is the relative amplitude of the noise. We obtain this prediction using a symmetry analysis of the helicity density flux. For Alfven wave turbulent reconnection, a mean field closure scheme is applied. A reconnection rate proportional to (< B-tilde {sup 2}>/ {sup 2}){sup 1/8} is obtained, where < B-tilde {sup 2}>/ {sup 2} and (B) are the relative energy of Alfven wave turbulence and the reconnecting field. The constraint on reconnection rate enforced mean-square magnetic potential conservation is reexamined. A critical magnetic Reynolds number R{sub m,c} is identified. For R{sub m} >> R{sub m,c}, the reconnection rate becomes independent of Spitzer resistivity and thus can be higher than the Sweet-Parker model prediction. Both cases exhibit a weak dependence of the reconnection rate on the amplitude of the turbulence. Therefore, even noise or weak turbulence can trigger fast reconnection if the system is marginally stable. The important distinction between turbulent reconnection and turbulent dissipation of magnetic energy is also discussed.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

MAGNETIC ENERGY AND HELICITY IN TWO EMERGING ACTIVE REGIONS IN THE SUN

The magnetic energy and relative magnetic helicity in two emerging solar active regions, AR 11072 and AR 11158, are studied. They are computed by integrating over time the energy and relative helicity fluxes across the photosphere. The fluxes consist of two components: one from photospheric tangential flows that shear and braid field lines (shear term), the other from normal flows that advect magnetic flux into the corona (emergence term). For these active regions: (1) relative magnetic helicity in the active-region corona is mainly contributed by the shear term, (2) helicity fluxes from the emergence and the shear terms have the same sign, (3) magnetic energy in the corona (including both potential energy and free energy) is mainly contributed by the emergence term, and (4) energy fluxes from the emergence term and the shear term evolved consistently in phase during the entire flux emergence course. We also examine the apparent tangential velocity derived by tracking field-line footpoints using a simple tracking method. It is found that this velocity is more consistent with tangential plasma velocity than with the flux transport velocity, which agrees with the conclusion by Schuck.

79 ASTRONOMY AND ASTROPHYSICS↗

Magnetic helicity in emerging solar active regions

Using vector magnetic field data from the Helioseismic and Magnetic Imager instrument aboard the Solar Dynamics Observatory, we study magnetic helicity injection into the corona in emerging active regions (ARs) and examine the hemispheric helicity rule. In every region studied, photospheric shearing motion contributes most of the helicity accumulated in the corona. In a sample of 28 emerging ARs, 17 follow the hemisphere rule (61% ± 18% at a 95% confidence interval). Magnetic helicity and twist in 25 ARs (89% ± 11%) have the same sign. The maximum magnetic twist, which depends on the size of an AR, is inferred in a sample of 23 emerging ARs with a bipolar magnetic field configuration.

79 ASTRONOMY AND ASTROPHYSICS↗

ON THE CONSERVATION OF CROSS HELICITY AND WAVE ACTION IN SOLAR-WIND MODELS WITH NON-WKB ALFVÉN WAVE REFLECTION

The interaction between Alfvén-wave turbulence and the background solar wind affects the cross helicity (∫d{sup 3}x v⋅B) in two ways. Non-WKB reflection converts outward-propagating Alfvén waves into inward-propagating Alfvén waves and vice versa, and the turbulence transfers momentum to the background flow. When both effects are accounted for, the total cross helicity is conserved. In the special case that the background density and flow speed are independent of time, the equations of cross-helicity conservation and total-energy conservation can be combined to recover a well-known equation derived by Heinemann and Olbert that has been interpreted as a non-WKB generalization of wave-action conservation. This latter equation (in contrast to cross-helicity and energy conservation) does not hold when the background varies in time.

79 ASTRONOMY AND ASTROPHYSICS↗

Chiral charge erasure via thermal fluctuations of magnetic helicity

We consider a relativistic plasma of fermions coupled to an Abelian gauge field and carrying a chiral charge asymmetry, which might arise in the early Universe through baryogenesis. It is known that on large length scales, λ≳1/(αμ{sub 5}), the chiral anomaly opens an instability toward the erasure of chiral charge and growth of magnetic helicity. Here the chemical potential μ{sub 5} parametrizes the chiral asymmetry and α is the fine-structure constant. We study the process of chiral charge erasure through the thermal fluctuations of magnetic helicity and contrast with the well-studied phenomenon of Chern-Simons number diffusion. Through the fluctuation-dissipation theorem we estimate the amplitude and time scale of helicity fluctuations on the length scale λ, finding δ H∼λT and τ∼αλ{sup 3}T{sup 2} for a relativistic plasma at temperature T. We argue that the presence of a chiral asymmetry allows the helicity to grow diffusively for a time t∼T{sup 3}/(α{sup 5}μ{sub 5}{sup 4}) until it reaches an equilibrium value H∼μ{sub 5}T{sup 2}/α, and the chiral asymmetry is partially erased. If the chiral asymmetry is small, μ{sub 5}<T/α, this avenue for chiral charge erasure is found to be slower than the chiral magnetic effect for which t∼T/(α{sup 3}μ{sub 5}{sup 2}). This mechanism for chiral charge erasure can be important for the hypercharge sector of the Standard Model as well as extensions including U(1) gauge interactions, such as asymmetric dark matter models.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

ON THE STRENGTH OF THE HEMISPHERIC RULE AND THE ORIGIN OF ACTIVE-REGION HELICITY

Vector magnetograph and morphological observations have shown that the solar magnetic field tends to have negative (positive) helicity in the northern (southern) hemisphere, although only ∼60%-70% of active regions appear to obey this 'hemispheric rule'. In contrast, at least ∼80% of quiescent filaments and filament channels that form during the decay of active regions follow the rule. We attribute this discrepancy to the difficulty in determining the helicity sign of newly emerged active regions, which are dominated by their current-free component; as the transverse field is canceled at the polarity inversion lines, however, the axial component becomes dominant there, allowing a more reliable determination of the original active-region chirality. We thus deduce that the hemispheric rule is far stronger than generally assumed, and cannot be explained by stochastic processes. Earlier studies have shown that the twist associated with the axial tilt of active regions is too small to account for the observed helicity; here, both tilt and twist are induced by the Coriolis force acting on the diverging flow in the emerging flux tube. However, in addition to this east-west expansion about the apex of the loop, each of its legs must expand continually in cross section during its rise through the convection zone, thereby acquiring a further twist through the Coriolis force. Since this transverse pressure effect is not limited by drag or tension forces, the final twist depends mainly on the rise time, and may be large enough to explain the observed active-region helicity.

79 ASTRONOMY AND ASTROPHYSICS↗

Test of Point-Source Helicity Injection for Non-Solenoidal Startup in NSTX

This grant supported research activity focused on the development of Local Helicity Injection (LHI) as a technique for initiation and growth of spherical tokamak plasmas without the use of a traditional ohmic solenoid for magnetic induction. The LHI technique consists of injection of high-density current streams into a vacuum magnetic field consisting of toroidal and vertical fields. Under appropriate conditions, these streams become unstable and support magnetic reconnection to allow the system to reconfigure itself into a tokamak-like plasma magnetic configuration. This research program focused on three aspects of this plasma startup technique: 1) development and tests of appropriate electron current sources that provide sufficiently high injection currents into the near-plasma edge without strongly contaminating the resultant tokamak plasma with impurities; 2) development and validation of a 0-D power balance model to describe the evolution of the plasma current I p (t) during this startup process; and 3) initial estimates of I p levels achievable with this technique in NSTX-U scale plasmas. The 0-D model development included extremely low aspect ratio corrections to analytical formulae for the plasma inductances that produce voltages due to rapid changes in plasma size and location. Applications of this model to sample plasmas in the Pegasus ultra-low aspect ratio tokamak confirms the expectation that I p (t) is dominated by these induced voltages when injection occurs from the outer low-field side of the plasma. Conversly, I p (t) is dominated by an effective toroidal loop voltage arising from helicity conservation when injectors are placed in the inner high-field side divertor region. The activities pursued here, combined with more general research on LHI followed by the Pegasus experiment group, provide the tools needed for initial consideration of a MA-level plasma startup capability for the NSTX-U experiment. Simplified modeling for LHI on NSTX-U indicates that no showstoppers exist, and ~ 0.8MA appears accessible using a moderate current injection facility. However, many issues remain to be resolved to address extrapolating this technique to the larger sizes and magnetic field strengths of NSTX-U and larger fusion-grade tokamaks. These include, among others: I p scaling with helicity drive input; extending current injector technology; understanding electron confinement and the resulting helicity dissipation processes that determine the achievable I p ; the role of plasma stability in controlling the current evolution; and controlling plasma-material interactions and impurity content. These open issues will be further explored in a future experiment dedicated to integrated studies of non-solenoidal startup at higher magnetic fields and plasma currents.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

MAGNETIC HELICITY OF ION KINETIC TURBULENCE WITH A NONZERO ELECTRON TEMPERATURE

Hybrid numerical simulations of strong turbulence with a nonzero electron temperature are carried out in the proton kinetic range. The turbulent cascade is initiated by a large-scale spectrum with a nonzero cross-helicity. The turbulence evolves freely and produces a magnetic helicity spectrum with a peak at smaller scales. Testing is performed to verify that the shape of the peak is not affected by numerical artifacts. The magnetic helicity spectrum is shown to be determined by both the electron and proton thermal pressures, rather than the proton pressure alone. Implications for the observed correlations between the magnetic helicity and the plasma parameters in the solar wind are discussed.

79 ASTRONOMY AND ASTROPHYSICS↗

THE EFFECT OF ELECTRON THERMAL PRESSURE ON THE OBSERVED MAGNETIC HELICITY IN THE SOLAR WIND

Statistical analysis of magnetic helicity spectra in the solar wind at 1 au is carried out. A large database of the solar wind intervals assembled from Wind spacecraft magnetic and plasma data is used. The effect of the electron thermal pressure on the wavenumber position of the helicity signature, i.e., the peak of the spectrum, is studied. The position shows a statistically significant dependence on both the electron and proton pressures. However, the strongest dependence is seen when the two pressures are summed. These findings confirm that the generation of the magnetic helicity is associated with an increasing compressibility of the turbulent fluctuations at smaller kinetic scales. It is argued that instrumental artifacts do not contribute to the helicity signature.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗