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At least 235 records · Page 13
All sourcesNASA NTRSDOE OSTI
NASA NTRS1997

A Comparison of PETSC Library and HPF Implementations of an Archetypal PDE Computation

Two paradigms for distributed-memory parallel computation that free the application programmer from the details of message passing are compared for an archetypal structured scientific computation a nonlinear, structured-grid partial differential equation boundary value problem using the same algorithm on the same hardware. Both paradigms, parallel libraries represented by Argonne's PETSC, and parallel languages represented by the Portland Group's HPF, are found to be easy to use for this problem class, and both are reasonably effective in exploiting concurrency after a short learning curve. The level of involvement required by the application programmer under either paradigm includes specification of the data partitioning (corresponding to a geometrically simple decomposition of the domain of the PDE). Programming in SPAM style for the PETSC library requires writing the routines that discretize the PDE and its Jacobian, managing subdomain-to-processor mappings (affine global- to-local index mappings), and interfacing to library solver routines. Programming for HPF requires a complete sequential implementation of the same algorithm, introducing concurrency through subdomain blocking (an effort similar to the index mapping), and modest experimentation with rewriting loops to elucidate to the compiler the latent concurrency. Correctness and scalability are cross-validated on up to 32 nodes of an IBM SP2.

Hayder, M. Ehtesham↗
NASA NTRS1998

MAPS of Cancer

Our goal was to produce an interactive visualization from a mathematical model that successfully predicts metastases from head and neck cancer. We met this goal early in the project. The visualization is available for the public to view. Our work appears to fill a need for more information about this deadly disease. The idea of this project was to make an easily interpretable visualization based on what we call "functional maps" of disease. A functional map is a graphic summary of medical data, where distances between parts of the body are determined by the probability of disease, not by anatomical distances. Functional maps often beat little resemblance to anatomical maps, but they can be used to predict the spread of disease. The idea of modeling the spread of disease in an abstract multidimensional space is difficult for many people. Our goal was to make the important predictions easy to see. NASA must face this problem frequently: how to help laypersons and professionals see important trends in abstract, complex data. We took advantage of concepts perfected in NASA's graphics libraries. As an analogy, consider a functional map of early America. Suppose we choose travel times, rather than miles, as our measures of inter-city distances. For Abraham Lincoln, travel times would have been the more meaningful measure of separation between cities. In such a map New Orleans would be close to Memphis because of the Mississippi River. St. Louis would be close to Portland because of the Oregon Trail. Oklahoma City would be far from Little Rock because of the Cheyenne. Such a map would look puzzling to those of us who have always seen physical maps, but the functional map would be more useful in predicting the probabilities of inter-site transit. Continuing the analogy, we could predict the spread of social diseases such as gambling along the rivers and cattle rustling along the trails. We could simply print the functional map of America, but it would be more interesting to show meaningful patterns of dispersal. We had previously published the functional map of the head and neck, but it was difficult to explain to either patients or surgeons because that view of our body did not resemble anatomy. This discrepancy between functional and physical maps is just a mathematical restatement of the well-known fact that some diseases, such as head and neck cancer, spread in complex patterns, not always to the next nearest site. We had discovered that a computer could re-arrange anatomy so that this particular disease spreads to the next nearest site. The functional map explains over 95% of the metastases in 1400 patients. In a sense, we had graphed what our body "looks like" to a tumor. The tumor readily travels between adjacent areas in the functional map. The functional map is a succinct visual display of trends that are not easily appreciated in tables of probabilities.

Gray, Lincoln↗
NASA NTRS1994

1993 Gordon Bell Prize Winners

The Gordon Bell Prize recognizes significant achievements in the application of supercomputers to scientific and engineering problems. In 1993, finalists were named for work in three categories: (1) Performance, which recognizes those who solved a real problem in the quickest elapsed time. (2) Price/performance, which encourages the development of cost-effective supercomputing. (3) Compiler-generated speedup, which measures how well compiler writers are facilitating the programming of parallel processors. The winners were announced November 17 at the Supercomputing 93 conference in Portland, Oregon. Gordon Bell, an independent consultant in Los Altos, California, is sponsoring $2,000 in prizes each year for 10 years to promote practical parallel processing research. This is the sixth year of the prize, which Computer administers. Something unprecedented in Gordon Bell Prize competition occurred this year: A computer manufacturer was singled out for recognition. Nine entries reporting results obtained on the Cray C90 were received, seven of the submissions orchestrated by Cray Research. Although none of these entries showed sufficiently high performance to win outright, the judges were impressed by the breadth of applications that ran well on this machine, all nine running at more than a third of the peak performance of the machine.

Karp, Alan H.↗
NASA NTRS2001

Validation of Surface Bio-Optical Properties in the Gulf of Maine as a Means for Improving Satellite Primary Production Estimates

One of the greatest challenges in providing sea-truth data for various ocean color sensors is climatology. This is particularly true in the Gulf of Maine since it is cloudy and foggy more than it is clear; the climatology shows on average, about one in four to five days has clear skies with clear days slightly more frequent in the late summer and early fall. Our strategy has been to use a ship of opportunity where one has choice of the sampling days. This provides much better flexibility to sample during clear periods with good satellite coverage. Our Sensor Intercomparison and Merger for Biological and Interdisciplinary Oceanic Studies (SIMBIOS) contract has been to use the M/S Scotia Prince ferry as a ship of opportunity, running between Portland, Maine and Yarmouth, NS. Measurements include continuous, surface, along-track fluorescence, two independent measures of backscattering, total light scattering, absorption, beam attenuation, above-water remote sensing reflectance, calcite-dependent light scattering, temperature, and salinity. Expendable bathythermography (XBT) drops allow acquisition of vertical temperature information, useful for defining isopycnal slope, which affects primary production. These data are comparable to a previous program from early 1982, where a ship of opportunity program (SOOP) was run on the truck ferry, M/V Marine Evangeline, which ran along the same transect. These surface data were combined with satellite-derived sea surface temperature fields to examine the Maine coastal current. Unfortunately, this program stopped in 1982. The ongoing SIMBIOS results will dovetail nicely with the previous work (which also had Coastal Zone Color Scanner (CZCS) coverage) for looking at any long-term changes in the Gulf of Maine hydrography, bio-optics, and biogeochemistry.

Balch, William M.↗
NASA NTRS1997

NAS Parallel Benchmark Results 11-96

The NAS Parallel Benchmarks have been developed at NASA Ames Research Center to study the performance of parallel supercomputers. The eight benchmark problems are specified in a "pencil and paper" fashion. In other words, the complete details of the problem to be solved are given in a technical document, and except for a few restrictions, benchmarkers are free to select the language constructs and implementation techniques best suited for a particular system. These results represent the best results that have been reported to us by the vendors for the specific 3 systems listed. In this report, we present new NPB (Version 1.0) performance results for the following systems: DEC Alpha Server 8400 5/440, Fujitsu VPP Series (VX, VPP300, and VPP700), HP/Convex Exemplar SPP2000, IBM RS/6000 SP P2SC node (120 MHz), NEC SX-4/32, SGI/CRAY T3E, SGI Origin200, and SGI Origin2000. We also report High Performance Fortran (HPF) based NPB results for IBM SP2 Wide Nodes, HP/Convex Exemplar SPP2000, and SGI/CRAY T3D. These results have been submitted by Applied Parallel Research (APR) and Portland Group Inc. (PGI). We also present sustained performance per dollar for Class B LU, SP and BT benchmarks.

Bailey, David H.↗
NASA NTRS1997

Performance Comparison of HPF and MPI Based NAS Parallel Benchmarks

Compilers supporting High Performance Form (HPF) features first appeared in late 1994 and early 1995 from Applied Parallel Research (APR), Digital Equipment Corporation, and The Portland Group (PGI). IBM introduced an HPF compiler for the IBM RS/6000 SP2 in April of 1996. Over the past two years, these implementations have shown steady improvement in terms of both features and performance. The performance of various hardware/ programming model (HPF and MPI) combinations will be compared, based on latest NAS Parallel Benchmark results, thus providing a cross-machine and cross-model comparison. Specifically, HPF based NPB results will be compared with MPI based NPB results to provide perspective on performance currently obtainable using HPF versus MPI or versus hand-tuned implementations such as those supplied by the hardware vendors. In addition, we would also present NPB, (Version 1.0) performance results for the following systems: DEC Alpha Server 8400 5/440, Fujitsu CAPP Series (VX, VPP300, and VPP700), HP/Convex Exemplar SPP2000, IBM RS/6000 SP P2SC node (120 MHz), NEC SX-4/32, SGI/CRAY T3E, and SGI Origin2000. We would also present sustained performance per dollar for Class B LU, SP and BT benchmarks.

Saini, Subhash↗
NASA NTRS1997

NAS Parallel Benchmark. Results 11-96: Performance Comparison of HPF and MPI Based NAS Parallel Benchmarks

High Performance Fortran (HPF), the high-level language for parallel Fortran programming, is based on Fortran 90. HALF was defined by an informal standards committee known as the High Performance Fortran Forum (HPFF) in 1993, and modeled on TMC's CM Fortran language. Several HPF features have since been incorporated into the draft ANSI/ISO Fortran 95, the next formal revision of the Fortran standard. HPF allows users to write a single parallel program that can execute on a serial machine, a shared-memory parallel machine, or a distributed-memory parallel machine. HPF eliminates the complex, error-prone task of explicitly specifying how, where, and when to pass messages between processors on distributed-memory machines, or when to synchronize processors on shared-memory machines. HPF is designed in a way that allows the programmer to code an application at a high level, and then selectively optimize portions of the code by dropping into message-passing or calling tuned library routines as 'extrinsics'. Compilers supporting High Performance Fortran features first appeared in late 1994 and early 1995 from Applied Parallel Research (APR) Digital Equipment Corporation, and The Portland Group (PGI). IBM introduced an HPF compiler for the IBM RS/6000 SP/2 in April of 1996. Over the past two years, these implementations have shown steady improvement in terms of both features and performance. The performance of various hardware/ programming model (HPF and MPI (message passing interface)) combinations will be compared, based on latest NAS (NASA Advanced Supercomputing) Parallel Benchmark (NPB) results, thus providing a cross-machine and cross-model comparison. Specifically, HPF based NPB results will be compared with MPI based NPB results to provide perspective on performance currently obtainable using HPF versus MPI or versus hand-tuned implementations such as those supplied by the hardware vendors. In addition we would also present NPB (Version 1.0) performance results for the following systems: DEC Alpha Server 8400 5/440, Fujitsu VPP Series (VX, VPP300, and VPP700), HP/Convex Exemplar SPP2000, IBM RS/6000 SP P2SC node (120 MHz) NEC SX-4/32, SGI/CRAY T3E, SGI Origin2000.

Saini, Subash↗
NASA NTRS1998

A Comparison of Automatic Parallelization Tools/Compilers on the SGI Origin 2000 Using the NAS Benchmarks

Porting applications to new high performance parallel and distributed computing platforms is a challenging task. Since writing parallel code by hand is extremely time consuming and costly, porting codes would ideally be automated by using some parallelization tools and compilers. In this paper, we compare the performance of the hand written NAB Parallel Benchmarks against three parallel versions generated with the help of tools and compilers: 1) CAPTools: an interactive computer aided parallelization too] that generates message passing code, 2) the Portland Group's HPF compiler and 3) using compiler directives with the native FORTAN77 compiler on the SGI Origin2000.

Saini, Subhash↗
NASA NTRS2004

The GOES-R Lightning Mapper Sensor

The Lightning Mapper Sensor on GOES-R builds on previous measurements of lightning from low earth orbit by the OTD (Optical Transient Detector) and LIS (Lightning Imaging Sensor) sensors. Unlike observations from low earth orbit, the GOES-R platform will allow continuous monitoring of lightning activity over the Continental United States and southern Canada, Central and South America, and portions of the Atlantic and Pacific Oceans. The LMS will detect total (cloud-to-ground and intracloud) lightning at storm scale resolution (approx. 8 km) using a highly sensitive Charge Coupled Device (CCD) detector array. Discrimination between lightning optical transients and a bright sunlit background scene is accomplished by employing spectral, spatial, and temporal filtering along with a background subtraction technique. The result is 24 hour detection capability of total lightning. These total lightning observations can be made available to users within about 20 seconds. Research indicates a number of ways that total lightning observations from LMS could benefit operational activities, including 1) potential increases in lead times and reduced false alarms for severe thunderstorm and tornado Warnings, 2) improved routing of &rail around thunderstorms, 3) support for spacecraft launches and landings, 4) improved ability to monitor tropical cyclone intensity, 5) ability to monitor thunderstorm intensification/weakening during radar outages or where radar coverage is poor, 6) better identification of deep convection for the initialization of numerical prediction models, 7) improved forest fire forecasts, 8) identification of convective initiation, 9) identification of heavy convective snowfall, and 10) enhanced temporal resolution of storm evolution (1 minute) than is available from radar observations. Total lightning data has been used in an operational environment since July 2003 at the Huntsville, Alabama National Weather Service office. Total lightning measurements are obtained by the North Alabama Lightning Mapping Array (LMA) and have successfully been used in warning decisions. Every 2 minutes, total lightning counts in 2 km by 2 km horizontal, 1 km vertical grids are available to forecasters on an AWIPS (Advanced Weather Interactive Processing System) workstation. Experience with the LMA total lightning data is used to illustrate the potential use of LMS data that would be available to forecasters across the US. This abstract is for submission as a presentation to the National Weather Association Annual Meeting to be held 16-21 October 2004 in Portland, OR. This abstract will be published in the conference proceedings.

Buechler, Dennis↗
NASA NTRS2006

Material Concerns: Evaluating Sulfur Concrete for use in the Lunar Environment

On Earth sulfur "concrete" is an established construction material that has good mechanical properties, generally better than Portland cement, and can be used in corrosive environments. Troilite (FeS) has been found on the moon and raises the question of using extracted sulfur as a lunar construction material, an attractive alternative to conventional concrete as it does not require water. Troilite reduction to elemental sulfur and using it to make concrete in a lunar setting has been previously discussed. However, little has been experimentally done to evaluate its performance in the extreme lunar environment. This study subjected sets of sulfur concrete samples, prepared using JSC-1 lunar simulant, to I ) extended periods of high vacuum and 2) extreme temperature cycles. Here an overview of sulfur concrete and experimentally assessed properties, put in context of the lunar environment, is presented and discussed.

Grugel, Richard N.↗
NASA NTRS1979

Solar Schematic

The home shown at right is specially designed to accommodate solar heating units; it has roof planes in four directions, allowing placement of solar collectors for best exposure to the sun. Plans (bottom) and complete working blueprints for the solar-heated house are being marketed by Home Building Plan Service, Portland, Oregon. The company also offers an inexpensive schematic (center) showing how a homeowner only moderately skilled in the use of tools can build his own solar energy system, applicable to new or existing structures. The schematic is based upon the design of a low-cost solar home heating system built and tested by NASA's Langley Research Center; used to supplement a warm-air heating system, it can save the homeowner about 40 percent of his annual heating bill for a modest investment in materials and components. Home Building Plan Service saved considerable research time by obtaining a NASA technical report which details the Langley work. The resulting schematic includes construction plans and simplified explanations of solar heat collection, collectors and other components, passive heat factors, domestic hot water supply and how to work with local heating engineers.

Source record↗
NASA NTRS2009

Star-Mapping Tools Enable Tracking of Endangered Animals

Software programmer Jason Holmberg of Portland, Oregon, partnered with a Goddard Space Flight Center astrophysicist to develop a method for tracking the elusive whale shark using the unique spot patterns on the fish s skin. Employing a star-mapping algorithm originally designed for the Hubble Space Telescope, Holmberg created the Shepherd Project, a photograph database and pattern-matching system that can identify whale sharks by their spots and match images contributed to the database by photographers from around the world. The system has been adapted for tracking other rare and endangered animals, including polar bears and ocean sunfish.

Source record↗
NASA NTRS2012

A Novel Technique for Running the NASA Legacy Code LAPIN Synchronously With Simulations Developed Using Simulink

This report presents a method for running a dynamic legacy inlet simulation in concert with another dynamic simulation that uses a graphical interface. The legacy code, NASA's LArge Perturbation INlet (LAPIN) model, was coded using the FORTRAN 77 (The Portland Group, Lake Oswego, OR) programming language to run in a command shell similar to other applications that used the Microsoft Disk Operating System (MS-DOS) (Microsoft Corporation, Redmond, WA). Simulink (MathWorks, Natick, MA) is a dynamic simulation that runs on a modern graphical operating system. The product of this work has both simulations, LAPIN and Simulink, running synchronously on the same computer with periodic data exchanges. Implementing the method described in this paper avoided extensive changes to the legacy code and preserved its basic operating procedure. This paper presents a novel method that promotes inter-task data communication between the synchronously running processes.

Vrnak, Daniel R.↗
NASA NTRS2012

Post-Flight EDL Entry Guidance Performance of the 2011 Mars Science Laboratory Mission

The 2011 Mars Science Laboratory was the first successful Mars mission to attempt a guided entry which safely delivered the rover to a final position approximately 2 km from its target within a touchdown ellipse of 19.1 km x 6.9 km. The Entry Terminal Point Controller guidance algorithm is derived from the final phase Apollo Command Module guidance and, like Apollo, modulates the bank angle to control the range flown. For application to Mars landers which must make use of the tenuous Martian atmosphere, it is critical to balance the lift of the vehicle to minimize the range error while still ensuring a safe deploy altitude. An overview of the process to generate optimized guidance settings is presented, discussing improvements made over the last nine years. Key dispersions driving deploy ellipse and altitude performance are identified. Performance sensitivities including attitude initialization error and the velocity of transition from range control to heading alignment are presented. Just prior to the entry and landing of MSL in August 2012, the EDL team examined minute tuning of the reference trajectory for the selected landing site, analyzed whether adjustment of bank reversal deadbands were necessary, the heading alignment velocity trigger was in union with other parameters to balance the EDL risks, and the vertical L/D command limits. This paper details a preliminary postflight assessment of the telemetry and trajectory reconstruction that is being performed, and updates the information presented in the former paper Entry Guidance for the 2011 Mars Science Laboratory Mission (AIAA Atmospheric Flight Mechanics Conference; 8-11 Aug. 2011; Portland, OR; United States)

Mendeck, Gavin F.↗
NASA NTRS2015

CapiBRIC- Capillary-Based Brine Residual In-Containment for Secondary Water Recovery

One of the goals of the AES Life Support Systems Project is to achieve 98% water loop closure for long-duration human exploration missions. Brine water recovery is the primary technology gap that must be bridged to realize this goal. In response to an Agency call for technologies to compete in an October down-select, Capi-BRIC was chosen through a JSC down-select as the strongest candidate to go forward. This resulted in a period of intense development to increase its TRL in preparation for the Agency down-select. This was achieved through rapid prototype design, fabrication, and test at JSC and in a zero-g drop tower at Portland State University. INNOVATION CapiBRIC takes a novel approach of optimizing the containment geometry to support capillary flow and static phase separation to enable evaporation in a microgravity environment. OUTCOME TRL was advanced from 3 to 4, and was selected for continued funding through the AES program. CapiBRIC is poised for development into an ISS technology demonstration, proving its viability as an enabling technology for exploration.

Sargusingh, Miriam↗
NASA NTRS2016

Design Status of the Capillary Brine Residual in Containment Water Recovery System

One of the goals of the AES Life Support System (LSS) Project is to achieve 98% water loop closure for long duration human exploration missions beyond low Earth orbit. To meet this objective, the AES LSS Project is developing technologies to recover water from wastewater brine; highly concentrated waste products generated from a primary water recovery system. The state of the art system used aboard the International Space Station (ISS) has the potential to recover up to 85% water from unine wastewater, leaving a significant amounts of water in the waste brine, the recovery of which is critical technology gap that must be filled in order to enable long duration human exploration. Recovering water from the urine wastewater brine is complicated by the concentration of solids as water is removed from the brine, and the concentration of the corrosive, toxic chemicals used to stabilize the urine which fouls and degrades water processing hardware, and poses a hazard to operators and crew. Brine Residual in Containment (BRIC) is focused on solids management through a process of "in-place" drying - the drying of brines within the container used for final disposal. Application of in-place drying has the potential to improve the safety and reliability of the system by reducing the exposure to curew and hardware to the problematic brine residual. Through a collaboration between the NASA Johnson Space Center and Portland Status University, a novel water recovery system was developed that utilizes containment geometry to support passive capillary flow and static phase separation allowing free surface evaporation to take place in a microgravity environment. A notional design for an ISS demonstration system was developed. This paper describes the testing performed to characterize the performance of the system as well as the status of the system level design.

Sargusingh, Miriam J.↗
NASA NTRS2015

Report About the NASA-MSU Professional Enhancement Awards in 2015

With support from NASA and Michigan State University (MSU), 17 "NASA-MSU Professional Enhancement Award" recipients were able to attend the 2015 World Congress of Landscape Ecology. This year's conference was held in Portland (Oregon) during July 5-10, 2015 (http://www.ialeworldcongress.org/). On May 6, a dinner gathering was organized for the new NASA-MSU Award recipients. At the gathering, the participants first made a brief self-introduction regarding their background and research interests. Then they formed five groups to work on manuscripts. Furthermore, each new awardee was recognized with a certificate at the conference luncheon on July 6. In addition, the awardees attended a "Student/Mentor Lunch" on July 8 when the awardees (and other students) met with leading scientists. The awardees also attended a workshop on telecoupling on July 5. The awardees had a great time and were very productive at the conference, and many are continuing to collaborate on preparing manuscripts after the conference and preparing presentations for next year's meeting of US-IALE.

Liu, Jianguo (Jack)↗
NASA NTRS2016

Design Status of the Capillary Brine Residual in Containment Water Recovery System

One of the goals of the AES Life Support System (LSS) Project is to achieve 98% water loop closure for long duration human exploration missions beyond low Earth orbit. To meet this objective, the AES LSS Project is developing technologies to recover water from wastewater brine; highly concentrated waste products generated from a primary water recovery system. The state of the art system used aboard the International Space Station (ISS) has the potential to recover up to 85% water from unine wastewater, leaving a significant amounts of water in the waste brine, the recovery of which is a critical technology gap that must be filled in order to enable long duration human exploration. Recovering water from the urine wastewater brine is complicated by the concentration of solids as water is removed from the brine, and the concentration of the corrosive, toxic chemicals used to stabilize the urine which fouls and degrades water processing hardware, and poses a hazard to operators and crew. Brine Residual in Containment (BRIC) is focused on solids management through a process of "in-place" drying - the drying of brines within the container used for final disposal. Application of in-place drying has the potential to improve the safety and reliability of the system by reducing the exposure to crew and hardware to the problematic brine residual. Through a collaboration between the NASA Johnson Space Center and Portland Status University, a novel water recovery system was developed that utilizes containment geometry to support passive capillary flow and static phase separation allowing free surface evaporation to take place in a microgravity environment. A notional design for an ISS demonstration system was developed. This paper describes the concept for the system level design.

Callahan, Michael R.↗