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At least 235 records · Page 13

Tomography of pions and kaons in the QCD vacuum: Transverse momentum dependent parton distribution functions

We evaluate the pion and kaon transverse momentum dependent parton distribution functions in the instanton liquid model, a model of the QCD vacuum at low resolution. The relevant transverse momentum distributions (TMDs) are factored into a constituent quark distribution times a rapidity dependent soft factor from staple-shaped Wilson lines, for fixed parton longitudinal momentum and transverse separation. The results are evolved to higher rapidities using the Collins-Soper kernel and higher resolution using renormalization group evolution. The comparison to existing extractions of pion TMDs from Drell-Yan data is briefly discussed.

classical solutions in field theory↗

Operator evolution from the similarity renormalization group and the Magnus expansion

The Magnus expansion is an efficient alternative to solving similarity renormalization group (SRG) flow equations with high-order, memory-intensive ordinary differential equation solvers. The numerical simplifications it offers for operator evolution are particularly valuable for in-medium SRG calculations, though challenges remain for difficult problems involving intruder states. Here we test the Magnus approach in an analogous but more accessible situation, which is the free-space SRG treatment of the spurious bound states arising from a leading-order chiral effective field theory (EFT) potential with very high cutoffs. In this work, we show that the Magnus expansion passes these tests and then use the investigations as a springboard to address various aspects of operator evolution that have renewed relevance in the context of the scale and scheme dependence of nuclear processes. These aspects include SRG operator flow with band- versus block-diagonal generators, universality for chiral EFT Hamiltonians and associated operators with different regularization schemes, and the impact of factorization arising from scale separation. Implications for short-range correlations physics and the possibilities for reconciling high- and low-resolution treatments of nuclear structure and reactions are discussed.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Quantum Monte Carlo calculations in configuration space with three-nucleon forces

Neutron matter, through its connection to neutron stars as well as systems like cold atom gases, is one of the most interesting yet computationally accessible systems in nuclear physics. The Configuration-Interaction Monte Carlo (CIMC) method is a stochastic many-body technique allowing to tackle strongly coupled systems. In contrast to other Quantum Monte Carlo methods employed in nuclear physics, the CIMC method can be formulated directly in momentum space allowing for an efficient use of non-local interactions. In this work we extend CIMC method to include three-nucleon interactions through the normal-ordered two-body approximation. Here, we present results for the equation of state of neutron matter in line with other many-body calculations that employ low resolution chiral interactions, and provide predictions for the momentum distribution and the static structure factor.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Design and characterization of a phonon-mediated cryogenic particle detector with an eV-scale threshold and 100 keV-scale dynamic range

We present the design and characterization of a cryogenic phonon-sensitive Si detector exploiting the Neganov-Tromov-Luke effect to detect single-charge excitations. This device achieved 2.65(2) eV phonon energy resolution when operated without a voltage bias across the crystal and a corresponding charge resolution of 0.03 electron-hole pairs at 100 V bias. With a continuous-readout data acquisition system and an oine optimum-filter trigger, we obtain a 9.2 eV threshold with a trigger rate of the order of 20 Hz. The detector's energy scale is calibrated up to 120 keV using an energy estimator based on the pulse area. The high performance of this device allows its application to different fields where excellent energy resolution, low threshold, and large dynamic range are required, including dark matter searches, precision measurements of coherent neutrino-nucleus scattering, and ionization yield measurements.

Ren, R↗

Pion gravitational form factors in the QCD instanton vacuum. I

The pion form factors of the QCD energy-momentum tensor (EMT) are studied in the instanton liquid model (ILM) of the QCD vacuum. In this approach, the breaking of conformal symmetry is encoded in the form of stronger-than-Poisson fluctuations in the number of instantons. For the trace of the EMT, it is shown that the gluonic trace anomaly term contributes half the pion mass, with the other half coming from the quark-mass-dependent σ term. The Q 2 dependence of the form factors is governed by glueball and scalar meson exchanges. For the EMT, the spin-0 (trace) and spin-2 (traceless rank-2 tensor) form factors are computed at next-to-leading order in the instanton density using effective quark operators. Relations between the gluon and quark contributions to the EMT form factors are derived. The form factors are also expressed in terms of the pion light-front wave functions in the ILM. The results at the low resolution scale of the inverse instanton size are evolved to higher scales using the renormalization group equation. The ILM results compare well with those of recent lattice QCD calculations. Published by the American Physical Society 2024

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Coexistence of Bulk-Nodal and Surface-Nodeless Cooper Pairings in a Superconducting Dirac Semimetal

The interplay of nontrivial topology and superconductivity in condensed matter physics gives rise to exotic phenomena. However, materials are extremely rare where it is possible to explore the full details of the superconducting pairing. Here, we investigate the momentum dependence of the superconducting gap distribution in a novel Dirac material PdTe. Using high resolution, low temperature photoemission spectroscopy, we establish it as a spin-orbit coupled Dirac semimetal with the topological Fermi arc crossing the Fermi level on the (010) surface. This spin-textured surface state exhibits a fully gapped superconducting Cooper pairing structure below $T_{c}$ ~ 4.5 K. Moreover, we find a node in the bulk near the Brillouin zone boundary, away from the topological Fermi arc. In conclusion, these observations not only demonstrate the band resolved electronic correlation between topological Fermi arc states and the way it induces Cooper pairing in PdTe, but also provide a rare case where surface and bulk states host a coexistence of nodeless and nodal gap structures enforced by spin-orbit coupling.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Physics-constrained superresolution diffusion for six-dimensional phase space diagnostics

Adaptive physics-constrained superresolution diffusion is developed for noninvasive virtual diagnostics of the six-dimensional (6D) phase space density of charged particle beams. An adaptive variational autoencoder embeds initial beam condition images and scalar measurements to a low-dimensional latent space from which a 32 6 pixel 6D tensor representation of the beam's 6D phase space density is generated. Projecting from a 6D tensor generates physically consistent two-dimensional projections. Physics-guided superresolution diffusion transforms low-resolution images of the 6D density to high resolution 256 × 256 pixel images. Unsupervised adaptive latent space tuning enables tracking of time-varying beams without knowledge of time-varying initial conditions. The method is demonstrated with experimental data and multiparticle simulations at the HiRES UED. The general approach is applicable to a wide range of complex dynamic systems evolving in high-dimensional phase space. The method is shown to be robust to distribution shift without retraining. Published by the American Physical Society 2025

43 PARTICLE ACCELERATORS↗

CERES : a cryo-EM re-refinement system for continuous improvement of deposited models

The field of electron cryomicroscopy (cryo-EM) has advanced quickly in recent years as the result of numerous technological and methodological developments. This has led to an increase in the number of atomic structures determined using this method. Recently, several tools for the analysis of cryo-EM data and models have been developed within the Phenix software package, such as phenix.real_space_refine for the refinement of atomic models against real-space maps. Also, new validation metrics have been developed for low-resolution cryo-EM models. To understand the quality of deposited cryo-EM structures and how they might be improved, models deposited in the Protein Data Bank that have map resolutions of better than 5 Å were automatically re-refined using current versions of Phenix tools. The results are available on a publicly accessible web page (https://cci.lbl.gov/ceres). The implementation of a Cryo-EM Re-refinement System ( CERES ) for the improvement of models deposited in the wwPDB, and the results of the re-refinements, are described. Based on these results, contents are proposed for a `cryo-EM Table 1', which summarizes experimental details and validation metrics in a similar way to `Table 1' in crystallography. The consistent use of robust metrics for the evaluation of cryo-EM models and data should accompany every structure deposition and be reported in scientific publications.

59 BASIC BIOLOGICAL SCIENCES↗

Overall protein structure quality assessment using hydrogen-bonding parameters

Atomic model refinement at low resolution is often a challenging task. This is mostly because the experimental data are not sufficiently detailed to be described by atomic models. To make refinement practical and ensure that a refined atomic model is geometrically meaningful, additional information needs to be used such as restraints on Ramachandran plot distributions or residue side-chain rotameric states. However, using Ramachandran plots or rotameric states as refinement targets diminishes the validating power of these tools. Therefore, finding additional model-validation criteria that are not used or are difficult to use as refinement goals is desirable. Hydrogen bonds are one of the important noncovalent interactions that shape and maintain protein structure. These interactions can be characterized by a specific geometry of hydrogen donor and acceptor atoms. Systematic analysis of these geometries performed for quality-filtered high-resolution models of proteins from the Protein Data Bank shows that they have a distinct and a conserved distribution. Here, it is demonstrated how this information can be used for atomic model validation.

59 BASIC BIOLOGICAL SCIENCES↗

Electronic Scanning Strategies in Adaptive Electrical Capacitance Volume Tomography: Tradeoffs and Prospects

Electrical Capacitance Volume Tomography (ECVT) has been applied for imaging of multiphase flows found in industrial applications. The ill-posed nature of the image reconstruction problem in ECVT and the consequent low resolution can be alleviated by employing electronic scanning enabled by electrode segmentation and reconfiguration during data acquisition. Here we study electronic scanning strategies that mimic physical rotation and shifting of the sensor along its symmetry axis. First, we study the feasibility of electronic scanning by analyzing the capacitance transducer circuit in SPICE. Then, we simulate electronic scanning using the finite element method for different electrode shapes, for which we compare the image reconstruction results and acquisition time. We find a noticeable improvement in image resolution for the scanning cases over conventional ECVT. Lastly, among the scanning cases, we emphasize a particular electrode shape that provides the best image resolution along with the minimal amount of acquisition time.

47 OTHER INSTRUMENTATION↗

Disaggregating Customer-Level Behind-the-Meter PV Generation Using Smart Meter Data and Solar Exemplars

Customer-level rooftop photovoltaic (PV) has been widely integrated into distribution systems. In most cases, PVs are installed behind-the-meter (BTM), and only the net demand is recorded. Therefore, the native demand and PV generation are unknown to utilities. Separating native demand and solar generation from net demand is critical for improving grid-edge observability. In this paper, a novel approach is proposed for disaggregating customer-level BTM PV generation using low-resolution but widely available hourly smart meter data. The proposed approach exploits the strong correlation between monthly nocturnal and diurnal native demands and the high similarity among PV generation profiles. First, a joint probability density function (PDF) of monthly nocturnal and diurnal native demands is constructed for customers without PVs, using Gaussian mixture modeling (GMM). Deviation from the constructed PDF is utilized to probabilistically assess the monthly solar generation of customers with PVs. Then, to identify hourly BTM solar generation for these customers, their estimated monthly solar generation is decomposed into an hourly timescale; to do this, we have proposed a maximum likelihood estimation (MLE)-based technique that utilizes hourly typical solar exemplars. Leveraging the strong monthly native demand correlation and high PV generation similarity enhances our approach's robustness against the volatility of customers’ hourly load and enables highly-accurate disaggregation. Furthermore, the proposed approach has been verified using real native demand and PV generation data.

14 SOLAR ENERGY↗

Structural analysis of the NifL-NifA complex reveals the molecular basis of anti-activation of nitrogen fixation gene expression in Azotobacter vinelandii

Understanding the molecular basis of regulated nitrogen (N 2 ) fixation is essential for engineering N 2 -fixing bacteria that fulfill the demand of crop plants for fixed nitrogen, reducing our reliance on synthetic nitrogen fertilizers. In Azotobacter vinelandii and many other members of Proteobacteria, the two-component system comprising the anti-activator protein (NifL) and the Nif-specific transcriptional activator (NifA)controls the expression of nif genes, encoding the nitrogen fixation machinery. The NifL-NifA system evolved the ability to integrate several environmental cues, such as oxygen, nitrogen, and carbon availability. The nitrogen fixation machinery is thereby only activated under strictly favorable conditions, enabling diazotrophs to thrive in competitive environments. While genetic and biochemical studies have enlightened our understanding of how NifL represses NifA, the molecular basis of NifA sequestration by NifL depends on structural information on their interaction. Here, we present mechanistic insights into how nitrogen fixation is regulated by combining biochemical and genetic approaches with a low-resolution cryo-electron microscopy (cryo-EM) map of the oxidized NifL-NifA complex. Our findings define the interaction surface between NifL and NifA and reveal how this interaction can be manipulated to generate bacterial strains with increased nitrogen fixation rates able to secrete surplus nitrogen outside the cell, a crucial step in engineering improved nitrogen delivery to crop plants.

59 BASIC BIOLOGICAL SCIENCES↗

Hidden fluid mechanics: Learning velocity and pressure fields from flow visualizations

For centuries, flow visualization has been the art of making fluid motion visible in physical and biological systems. Although such flow patterns can be, in principle, described by the Navier-Stokes equations, extracting the velocity and pressure fields directly from the images is challenging. We addressed this problem by developing hidden fluid mechanics (HFM), a physics-informed deep-learning framework capable of encoding the Navier-Stokes equations into the neural networks while being agnostic to the geometry or the initial and boundary conditions. We demonstrate HFM for several physical and biomedical problems by extracting quantitative information for which direct measurements may not be possible.

Raissi, Maziar↗

$$\alpha $$-event characterization and rejection in point-contact HPGe detectors

Abstract P-type point contact (PPC) HPGe detectors are a leading technology for rare event searches due to their excellent energy resolution, low thresholds, and multi-site event rejection capabilities. We have characterized a PPC detector’s response to $$\alpha $$ α particles incident on the sensitive passivated and p $$^+$$ + surfaces, a previously poorly-understood source of background. The detector studied is identical to those in the Majorana Demonstrator experiment, a search for neutrinoless double-beta decay ( $$0\nu \beta \beta $$ 0 ν β β ) in $$^{76}$$ 76 Ge. $$\alpha $$ α decays on most of the passivated surface exhibit significant energy loss due to charge trapping, with waveforms exhibiting a delayed charge recovery (DCR) signature caused by the slow collection of a fraction of the trapped charge. The DCR is found to be complementary to existing methods of $$\alpha $$ α identification, reliably identifying $$\alpha $$ α background events on the passivated surface of the detector. We demonstrate effective rejection of all surface $$\alpha $$ α events (to within statistical uncertainty) with a loss of only 0.2% of bulk events by combining the DCR discriminator with previously-used methods. The DCR discriminator has been used to reduce the background rate in the $$0\nu \beta \beta $$ 0 ν β β region of interest window by an order of magnitude in the Majorana Demonstrator and will be used in the upcoming LEGEND-200 experiment.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

INtegrated Fluid & paRticles simulatioN cOde (INF&RNO) v1.0

INF&RNO (INtegrated Fluid & paRticle simulation cOde) is a 2D cylindrical (r-z) code to model the interaction of short laser pulse(s) with an underdense plasma. The code is based on an envelope model for the laser field, and the action of the laser on the plasma is modeled with the time-averaged ponderomotive force approximation. The code features an improved laser envelope solver which enables an accurate description of the laser pulse evolution deep into depletion even at a reasonably low resolution.

Benedetti, Carlo [Lawrence Berkeley National Labor↗

Energy Exascale Earth System Model v2.0

First release of version 2 of the Energy Exascale Earth System Model. The atmosphere component remains EAM. Major changes since version 1 include: all column-physics parameterizations are computed on a separate grid that has approximately half the number of points of the dynamics grid, a new nonhydrostatic dynamical core (running in hydrostatic mode) with semi-Lagrangian tracer transport, CLUBB updated from v1 to v2, a new convective trigger (dCAPE/ULL) based on the dynamic Convective Available Potential Energy (CAPE) (dCAPE) and the Unrestricted Launch Level (ULL) concepts is used in ZM. minimum cloud droplet number changed, gravity wave drag energy conservation fixed and new tunings used, dust emission size distribution changed to emit more coarse dust particles The land component is still ELM. Major changes since version 1 include: using SNICAR-AD for radiation in snow to match the sea-ice model and fixing bugs in snow compaction and water state calculation. The ocean component remains MPAS-ocean. Major change since version 1 include: Redi isopycnal mixing has been updated, tested, and tuned in combination with the Gent-McWilliams parameterization, a sign error was fixed in the 3rd-order flux routines, the mesh used in low-resolution coupled cases was modified and the time steps adjusted, new regionally refined meshes were created, one focused on North America and another on the Southern Ocean, including ice shelf cavities. The sea-ice component remains MPAS-seaice. Major changes since version 1 include: A new heat- and freshwater-conserving coupling of frazil ice, turning off of SSH filtering, addition of SNICAR-AD and snow grain aging. The land-ice component remains MPAS-Albany-landIce (MALI) and is a static ice sheet. There is more out-of-the-box support for cryosphere configurations including the new regionally refined configuration around Antarctica with ice shelf cavities. The river model is MOSART. The half-degree river mesh was redone so it no longer treats Black and Caspian seas as ocean. The coupler remains cpl7/MCT. Major changes since version 1 include handling of ice shelf melt fluxes (heat / freshwater exchange with the ocean), and data icebergs. All components allow regional refinement of their meshes and two separate example of refinement, one in and around North America and one around Antarctica and the Southern Ocean, are provided.

E3SM Project, DOE↗

West African Monsoon System’s Responses to Global Ocean–Regional Atmosphere Coupling

This study explores the added value (AV) of a regional Earth system model (ESM) compared to an atmosphere-only regional climate model (RCM) in simulating West African monsoon (WAM) rainfall. The primary goals are to foster discussions on the suitability of coupled RCMs for WAM projections and deepen our understanding of ocean–atmosphere coupling’s influence on the WAM system. The study employs results from dynamical downscaling of the ERA-Interim reanalysis and Max Plank Institute ESM, low resolution (MPI-ESM-LR), by two RCMs, atmosphere only (REMO) and REMO coupled with Max Planck Institute Ocean Model (MPIOM) (ROM), at ~25-km horizontal resolution. Results show that in regions distant from coupling domain boundaries such as West Africa (WA), constraint conditions from ERA-Interim are more beneficial than coupling effects. REMO, reliant on oceanic sea surface temperatures (SSTs) from observations and influenced by ERA-Interim, is biased under coupling conditions, although coupling offers potential advantages in representing heat and mass fluxes. Contrastingly, as intended, coupling improves SSTs and monsoon fluxes’ relationships under ESM-forced conditions. In this latter case, the coupling features a dipole-like spatial structure of AV, improving precipitation over the Guinea Coast but degrading precipitation over half of the Sahel. Our extensive examination of physical processes and mechanisms underpinning the WAM system supports the plausibility of AV. Additionally, we found that the monsoonal dynamics over the ocean respond to convective activity, with the Sahara–Sahel surface temperature gradient serving as the maintenance mechanism. While further efforts are needed to enhance the coupled RCM, we advocate for its use in the context of WAM rainfall forecasts and projections.

54 ENVIRONMENTAL SCIENCES↗

Niche-DE: niche-differential gene expression analysis in spatial transcriptomics data identifies context-dependent cell-cell interactions

Existing methods for analysis of spatial transcriptomic data focus on delineating the global gene expression variations of cell types across the tissue, rather than local gene expression changes driven by cell-cell interactions. We propose a new statistical procedure called niche-differential expression (niche-DE) analysis that identifies cell-type-specific niche-associated genes, which are differentially expressed within a specific cell type in the context of specific spatial niches. We further develop niche-LR, a method to reveal ligand-receptor signaling mechanisms that underlie niche-differential gene expression patterns. Niche-DE and niche-LR are applicable to low-resolution spot-based spatial transcriptomics data and data that is single-cell or subcellular in resolution.

59 BASIC BIOLOGICAL SCIENCES↗