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At least 235 records · Page 13

Longitudinal Surveillance for Chronic Health Conditions in Former United States Department of Energy Site Workers

The aim of the study was to determine (1) the rate at which rescreening former Department of Energy site workers identifies noncommunicable chronic diseases and (2) the development of comorbid conditions. Incidence and prevalence of hypertension, diabetes, reduced kidney function, and peripheral neuropathy at both initial and return screenings were calculated. Risk ratio of chronic disease development at return screening based on the presence of other conditions at initial screening were estimated with generalized linear regression. Prevalence of reduced kidney function was 19% at initial examination and 30% at return examination. The screening program was responsible for identifying 81% of reduced kidney function cases. Similar findings were present for the other chronic conditions examined. As a result, former worker health surveillance programs help identify significant health conditions among DOE workers, subcontractors, and visitors. Longitudinal screening of participants detects additional chronic conditions.

59 BASIC BIOLOGICAL SCIENCES↗

Utilizing machine learning to improve the precision of fluorescence imaging of cavity-generated spin squeezed states

We present a supervised learning model to calibrate the photon collection rate during the fluorescence imaging of cold atoms. The linear regression model finds the collection rate at each location on the sensor such that the atomic population difference equals that of a highly precise optical cavity measurement. This 192 variable regression results in a measurement variance 27% smaller than our previous single variable regression calibration. The measurement variance is now in agreement with the theoretical limit due to other known noise sources. This model efficiently trains in less than a minute on a standard personal computer's CPU and requires less than 10 min of data collection. Furthermore, the model is applicable across a large change in population difference and across data collected on different days.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Tuning the magnetic properties of the CrMnFeCoNi Cantor alloy

Magnetic properties of more than 20 Cantor alloy samples of varying composition were investigated over a temperature range of 5 K to 300 K and in fields of up to 70 kOe using magnetometry and muon spin relaxation. Two transitions are identified: a spin-glass-like transition that appears between 55K and 190K, depending on composition, and a ferrimagnetic transition that occurs at approximately 43K in multiple samples with widely varying compositions. The magnetic signatures at 43K are remarkably insensitive to chemical composition. A modified Curie-Weiss model was used to fit the susceptibility data and to extract the net effective magnetic moment for each sample. The resulting values for the net effective moment were either diminished with increasing Cr or Mn concentrations or enhanced with decreasing Fe, Co, or Ni concentrations. Beyond a sufficiently large effective moment, the magnetic ground state transitions from ferrimagnetism to ferromagnetism. The effective magnetic moments, together with the corresponding compositions, are used in a global linear regression analysis to extract element-specific effective magnetic moments, which are compared to the values obtained by ab initio based density functional theory calculations. Finally, these moments provide the information necessary to controllably tune the magnetic properties of Cantor alloy variants.

36 MATERIALS SCIENCE↗

Refining localtype primordial non-Gaussianity: Sharpened bϕ constraints through bias expansion

Local-type primordial non-Gaussianity (PNG), predicted by many nonminimal models of inflation, creates a scale-dependent contribution to the power spectrum of large-scale structure tracers. Its amplitude is characterized by the product bϕfNLloc, where bϕ is an astrophysical parameter dependent on the properties of the tracer. However, bϕ exhibits significant secondary dependence on halo concentration and other astrophysical properties, which may bias and weaken the constraints on fNLloc. In this work, we demonstrate that incorporating knowledge of the relation between Lagrangian bias parameters and bϕ can significantly enhance PNG constraints. We employ the hybrid effective field theory approach at the field level and a linear regression model to seek a connection between the bias parameters and bϕ for halo and galaxy samples, constructed using the abacussummit simulation suite and mimicking the luminous red galaxies and quasistellar objects of the Dark Energy Spectroscopic Instrument survey. For the fixed-mass halo samples, our full bias model reduces the uncertainty by more than 70%, with most of that improvement coming from b∇, which we find to be an excellent proxy for concentration. For the galaxy samples, our model reduces the uncertainty on bϕ by 80% for all tracers. By adopting Lagrangian-bias informed priors on the parameter bϕ, future analyses can thus constrain fNLloc with less bias and smaller errors.

Hadzhiyska, Boryana↗

Investigating the effects of local environment on nitrogen vacancies in high-entropy metal nitrides

High-entropy metal nitrides are an important material class in a variety of applications, and the role of nitrogen vacancies is of great importance for understanding their stability and mechanical properties. Here, we study six different high-entropy nitrides with eight different metal species to build a predictive model of the nitrogen-vacancy formation energy. We construct sets of supercells that maximize the number of unique nitrogen environments for a given chemistry, and then use density-functional theory to calculate the energy density for all nitrogen sites, and the vacancy formation energies for the highest, lowest, and a median subset based on the energy densities. The energy density of nitrogen sites correlates with the vacancy formation energies, for binary, ternary, and high-entropy nitrides. A linear regression model predicts the vacancy formation energies using only the nearest-neighbor composition; across our eight metals, we find the largest vacancy formation energies next to Hf, then Zr, Ti, V, Cr, Ta, Nb, and the lowest near Mo. Additionally, we see that binary nitride data show qualitatively similar vacancy formation energy trends for high-entropy nitrides; however, the binary data alone are insufficient to predict the complex nitride behavior. Our model is both predictive and easily interpretable, and correlates with experimental data.

DeSilva, Charith R. [Univ. of Illinois at Urbana-C↗

Bias Correction in Urban Building Energy Modeling for Chicago Using Machine Learning

Urban-scale building energy modeling (UBEM) holds promise for optimizing energy usage across extensive geographic regions. However, there is a recognized bias between simulated energy consumption and actual measured data. This study, based on building data from Chicago, delved into bias correction techniques for enhancing the accuracy of UBEM energy consumption estimates. Initially, the AutoBEM simulation yielded a normalized mean bias error (NMBE) of 1.1% and 51% of Coefficient of the Variation of the Root Mean Square Error (CVRMSE) after outlier exclusion. To address this, three bias correction methods were deployed: Average Mean Bias Error based bias correction, Quantile mapping bias correction, and Machine learning-based bias correction using Linear Regression and Random Forest models. Post-correction results exhibited marked improvement. The NMBE values were diminished to 0 for Average MBE-based, 0.36 for Quantile Mapping, and 0 for Machine Learning-based corrections. Concurrently, the CVRMSE values registered reductions from an original 51 to 50.8 for Quantile Mapping, and 38.56 for Machine Learning-based corrections, pointing towards the effectiveness of specific bias correction methods in refining the precision of UBEM energy predictions. Such accurate estimations are paramount for informed energy planning and urban policy-making.

Chowdhury, Shovan↗

Modeling pre-Exascale AMR Parallel I/O Workloads via Proxy Applications

The present work investigates the modeling of preexascale input/output (I/O) workloads of Adaptive Mesh Refinement (AMR) simulations through a simple proxy application. We collect data from the AMReX Castro framework running on the Summit supercomputer for a wide range of scales and mesh partitions for the hydrodynamic Sedov case as a baseline to provide sufficient coverage to the formulated proxy model. The non-linear analysis data production rates are quantified as a function of a set of input parameters such as output frequency, grid size, number of levels, and the Courant-Friedrichs-Lewy (CFL) condition number for each rank, mesh level and simulation time step. Linear regression is then applied to formulate a simple analytical model which allows to translate AMReX inputs into MACSio proxy I/O application parameters, resulting in a simple “kernel” approximation for data production at each time step. Results show that MACSio can simulate actual AMReX nonlinear “static” I/O workloads to a certain degree of confidence on the Summit supercomputer using the present methodology. The goal is to provide an initial level of understanding of AMR I/O workloads via lightweight proxy applications models to facilitate autotune data management strategies in anticipation of exascale systems.

Godoy, William↗

A Comparison of Machine Learning Methods for Frequency Nadir Estimation in Power Systems

An increasing penetration level of inverter-based renewable energy resources changes the inertia of power systems, posing challenges for maintaining the desired system frequency stability. An accurate frequency nadir estimation is crucial for power system operators to prepare preventive actions against large frequency excursions. In this paper, five machine learning methods - linear regression, gradient boosting, support vector regression, an artificial neural network, and XGBoost - are applied to two different datasets, i.e., 1) the unit generation dataset and 2) the system total inertia and headroom dataset, for the prediction of the frequency nadir. The training and testing datasets are generated through extensive generation scheduling simulations using Multi-timescale Integrated Dynamic and Scheduling (MI-DAS) toolbox on the Western Electricity Coordinating Council 240-bus system with high renewable penetration levels. Numerical results show that all five machine learning methods perform well in predicting the nadir frequency of the system. Among them, the gradient boosting and the XGBoost are clear winners yielding the best prediction accuracy in terms of four evaluation metrics.

data driven↗

Reduced-Order Models of Static Power Grids based on Spectral Clustering

For large-scale interconnected power systems that cover large geographical areas, certain electrical studies are required so that appropriate decisions ensure system reliability and low cost. For such studies, it is often neither practical nor necessary to model in detail the entire power system, which is increasingly complex due to a more diverse range of grid assets to choose from in both short and long-term planning. The goal of this paper is to present a methodology to reduce the order of large-scale power networks based on spectral graph theory given that current methods for static network reduction are not scalable. A brief analysis of some spectral clustering properties to determine which graph Laplacian matrix should be used and why is included. The analysis shows that the utilization of the normalized graph Laplacian is more advantageous for clustering purposes. Techniques are proposed to approximate cost functions for the aggregated generators. This is done via linear regression. The reduced-order model obtained with the proposed methodology has an accuracy above 94% and solves the scalability issue commonly present in other reduction methods. If the utilization of the reduced-order model is either constrained to load levels above mid-peak demand, or cost functions of aggregated units are approximated via a piecewise quadratic approach, then the error distribution is in the order of 10^-3. .

Baquedano-Aguilar, Mario D.↗

Six Machine-Learning Methods for Predicting Hospital-Stay Duration for Patients with Sepsis: A Comparative Study

Sepsis is a life-threatening medical condition that, if not treated promptly, can result in tissue damage, organ failure, and death. According to the Centers for Disease Control, about 270,000 individuals die of sepsis in the US each year. Further, sepsis expenditures accounted for 13% of total US hospital costs in 2013, totaling more than $24 billion. Our project objectives were to determine if Machine Learning algorithms could reliably predict hospital stay duration for patients with sepsis. The data set we used has been de-identified and is freely available through the BupaR package. The data includes 1050 cases, 15214 events, and 16 types of actions related to sepsis patient care. First, we used process mining to determine how long each patient was in the hospital. Using BupaR’s functions, we created several process model graphs. These process models depict the movement of patients at a hospital and provide duration data for each patent case. Second, we identified outlier data and created two dataset versions: one with and one without outliers. We then applied the following analysis methods: Linear Regression, Random Forest, K-Nearest Neighbors, Neural Networks, XGBoost, and lightGBM. We compared the model validations for the six machine learning models using the same data-splitting method. We found that the XGBoost model had the best prediction accuracy of 73.9 percent for cases with outliers, and 79 percent for cases without outliers. We also found that the lightGBM model had the lowest mean absolute error between prediction and actual duration in days with 3.66 days for the case with outliers, and 2.4 days for the case without outliers. These two models outperformed the other four models. This work will be enhanced in the future by exploring new prediction algorithms and comparing them with the results of this study.

Chen, Lingtao↗

Circuit Modelling of the Mechanical-Motion-Rectifier for Electrical Simulation of Ocean Wave Power Take-off

As is the case with several other mechanical power takeoffs (PTOs), the mechanical-motion-rectifier (MMR) based PTO consists of components such as one-way clutches, gears, a ball screw, mechanical couplings, and a generator. Equivalent circuit models have been created in this paper to describe the dry frictions, viscous damping, and mechanical compliances in these components, so the non-ideal efficiency and nonlinear force of the PTO can be predicted in electrical simulations by integrating these sub-circuit models. The circuit model is simplified, and its parameters are categorized as dc and ac unknowns. The dc and ac tests on the PTO are performed sequentially to extract two sets of parameters through linear regression or nonlinear curve fitting. Then, the model is validated through its prediction capability over 25 test conditions on input forces, output voltages, and efficiencies, with correlation coefficients of 0.9, 0.98, and 0.981, respectively.

42 ENGINEERING↗

A Machine Learning Initializer for Newton-Raphson AC Power Flow Convergence

Power flow computations are fundamental to many power system studies. Obtaining a converged power flow case is not a trivial task especially in large power grids due to the non-linear nature of the power flow equations. One key challenge is that the widely used Newton based power flow methods are sensitive to the initial voltage magnitude and angle estimates, and a bad initial estimate would lead to non-convergence. This paper addresses this challenge by developing a random-forest (RF) machine learning model to provide better initial voltage magnitude and angle estimates towards achieving power flow convergence. This method was implemented on a real ERCOT 6102 bus system under various operating conditions. By providing better Newton-Raphson initialization, the RF model precipitated the solution of 2,106 cases out of 3,899 non-converging dispatches. These cases could not be solved from flat start or by initialization with the voltage solution of a reference case. Finally, results obtained from the RF initializer performed better when compared with DC power flow initialization, Linear regression, and Decision Trees.

random forest↗

Signatures of cysteine oxidation on muscle structural and contractile proteins are associated with physical performance and muscle function in older adults: Study of Muscle, Mobility and Aging (SOMMA)

Oxidative stress is considered a contributor to declining muscle function and mobility during aging; however, the underlying molecular mechanisms remain poorly described. We hypothesized that greater levels of cysteine (Cys) oxidation on muscle proteins are associated with decreased measures of mobility. Herein, we applied a novel redox proteomics approach to measure reversible protein Cys oxidation in vastus lateralis muscle biopsies collected from 56 subjects in the Study of Muscle, Mobility and Aging (SOMMA), a community-based cohort study of individuals aged 70 years and older. We tested whether levels of Cys oxidation on key muscle proteins involved in muscle structure and contraction were associated with muscle function (leg power and strength), walking speed, and fitness (VO 2 peak on cardiopulmonary exercise testing) using linear regression models adjusted for age, sex, and body weight. Higher oxidation levels of select nebulin Cys sites were associated with lower VO 2 peak, while greater oxidation of myomesin-1, myomesin-2, and nebulin Cys sites was associated with slower walking speed. Higher oxidation of Cys sites in key proteins such as myomesin-2, alpha-actinin-2, and skeletal muscle alpha-actin were associated with lower leg power and strength. We also observed an unexpected correlation (R = 0.48) between a higher oxidation level of eight Cys sites in alpha-actinin-3 and stronger leg power. Despite this observation, the results generally support the hypothesis that Cys oxidation of muscle proteins impairs muscle power and strength, walking speed, and cardiopulmonary fitness with aging.

59 BASIC BIOLOGICAL SCIENCES↗

Time trend analysis of rare cancer incidence 2011–2018: Nationwide population-based cancer registries in Japan

Rare cancers collectively account for a significant proportion of the overall cancer burden in Japan. We aimed to describe and examine the incidence of each rare cancer and the temporal changes using the internationally agreed rare cancer classification. Cancer cases registered in regional population-based cancer registries from 2011 to 2015 and the National Cancer Registry (NCR) from 2016 to 2018 were classified into 18 families, 68 Tier-1 cancer groupings, and 216 single cancer entities based on the RARECAREnet list. Crude incidence rates and age-standardized incidence rates (ASR) were calculated for Tier-1 and Tier-2 cancers. The annual percent change and the 95% and 99% confidence limits for annual ASR for each of the 68 Tier-1 cancers were estimated using the log-linear regression of the weighted least squares method. The differences in ASRs between 2011 and 2018 were evaluated as an absolute change. A total of 5,640,879 cases were classified into Tier-1 and Tier-2 cancers. The ASRs of 18 out of 52 Tier-1 cancers in the rare cancer families increased, whereas the ASR for epithelial tumors of gallbladder decreased. The ASRs of 6 out of the 16 Tier-1 cancers in the common cancer families increased, whereas those of epithelial tumors of stomach and liver decreased. There was no significant change in the incidence of the other 40 Tier-1 cancers. The incidence of several cancers increased due to the dissemination of diagnostic concepts, improved diagnostic techniques, changes in coding practice, and the initiation of the NCR.

60 APPLIED LIFE SCIENCES↗

Key environmental and production factors for understanding variation in switchgrass chemical attributes

Abstract Switchgrass ( Panicum virgatum L.) is a promising feedstock for bioenergy and bioproducts; however, its inherent variability in chemical attributes creates challenges for uniform conversion efficiencies and product quality. It is necessary to understand the range of variation and factors (i.e., field management, environmental) influencing chemical attributes for process improvement and risk assessment. The objectives of this study were to (1) examine the impact of nitrogen fertilizer application rate, year, and location on switchgrass chemical attributes, (2) examine the relationships among chemical attributes, weather and soil data, and (3) develop models to predict chemical attributes using environmental factors. Switchgrass samples from a field study spanning four locations including upland cultivars, one location including a lowland cultivar, and between three and six harvest years were assessed for glucan, xylan, lignin, volatiles, carbon, nitrogen, and ash concentrations. Using variance estimation, location/cultivar, nitrogen application rate, and year explained 65%–96% of the variation for switchgrass chemical attributes. Location/cultivar × year interaction was a significant factor for all chemical attributes indicating environmental‐based influences. Nitrogen rate was less influential. Production variables and environmental conditions occurring during the switchgrass field trials were used to successfully predict chemical attributes using linear regression models. Upland switchgrass results highlight the complexity in plant responses to growing conditions because all production and environmental variables had strong relationships with one or more chemical attributes. Lowland switchgrass was limited to observations of year‐to‐year environmental variability and nitrogen application rate. All explanatory variable categories were important for lowland switchgrass models but stand age and precipitation relationships were particularly strong. The relationships found in this study can be used to understand spatial and temporal variation in switchgrass chemical attributes. The ability to predict chemical attributes critical for conversion processes in a geospatial/temporal manner would provide state‐of‐the‐art knowledge for risk assessment in the bioenergy and bioproducts industry.

09 BIOMASS FUELS↗

Thermophysical modeling of raw glaze liquidus temperature and viscosity

Raw glazes, which do not contain pre-melted glass frits, are widely used due to their low cost. The natural variability of the mineral compositions used in raw glazes affects their viscosity during firing. Molten glaze viscosity plays an important role in determining the final surface quality; therefore, it is important to determine how raw glaze composition and firing conditions affect viscosity. Thermophysical modeling provides a way to evaluate the liquidus temperature and viscosity of molten glazes as a function of composition and oxygen activity. Equilibrium phase volume fraction and composition of 242 raw glaze recipes were evaluated under oxidizing and reducing conditions. Undissolved or precipitation of solid phases explain the secondary flux transition from anti-fluxing to fluxing near the liquidus temperature. The liquidus temperature and viscosity of iron glazes decrease as a function of increasing iron content under a reducing atmosphere. The empirical probability distribution of molten glaze viscosity follows a lognormal distribution, with lead glazes having significantly lower viscosity compared with glazes without lead. Here, the peak firing temperature viscosity of lead-free glazes is near the working point of glass. Multiple linear regression analysis shows that the peak firing temperature viscosity and liquidus temperature significantly predict the viscosity factor.

36 MATERIALS SCIENCE↗

Predicting initial dissolution rates using structural features from molecular dynamics simulations

Predicting chemical durability of glass materials is important for various applications from daily life such as drink glass and kitchen ware to advanced technologies such as nuclear waste disposal and biomedicine. In this work, we explored prediction of initial dissolution rate through structural features from molecular dynamics (MD) simulations for a wide range of glass compositions (total 28) including borosilicate and aluminosilicate glasses, ZrO 2 -containing and V 2 O 5 -containing boroaluminosilicate glasses. The initial dissolution rates (r 0 ) measured experimentally at 90 °C with varying solution conditions were correlated with structural features (e.g., polyhedral linkages and non-bridging oxygen species) obtained from MD simulations, either from this study or from literature. Since hydrolysis of the glass network through breaking of the network former linkages (e.g., Si-O-Si, Si-O-Al, etc.) is a critical step of network glass dissolution, the statistics of these linkages obtained from MD were correlated to r0 through linear regression, where the coefficient of determination (R 2 ) and root mean square error are found to be 0.949 and 0.681, respectively. This model was compared and discussed with existing models developed by various approaches including machine learning, the kinetic rate equation, topological constraint theory, and other descriptors from MD simulations. The discussion provides insights on future model improvements to predict glass dissolution. In addition, the impact of V 2 O 5 on the glass dissolution was examined in detail, implicating that the impact is not the same across all glass compositions and test conditions.

36 MATERIALS SCIENCE↗

Using leaf and stomatal traits to predict biomass production and water use efficiency in Populus

Climate change is reshaping ecosystems, driving plants to adapt through leaf-trait plasticity that reflects strategies for growth and water use. Predicting biomass production and intrinsic water use efficiency (iWUE) remains challenging because of genetic, taxonomic, and environmental variability. Here, we used eastern cottonwood and Populus hybrids as a model system to test whether easily measurable leaf traits can serve as reliable predictors of performance, and whether adding stomatal and biochemical traits improves predictive power. Across two field sites in Mississippi, leaf mass per area (LMA), biomass production, iWUE, leaf area, and foliar nitrogen ( N %) differed significantly among taxa and sites, while other traits were conserved. Factorial analysis of mixed data (FAMD) revealed distinct clustering of taxa and sites, indicating coordinated variation among leaf and stomatal traits. Pairwise correlations highlighted fundamental trade-offs, with biomass positively related to LMA and petiole length but negatively associated with iWUE, N %, and carbon isotopic ratios (δ 13 C). Leaf temperature and leaf angle varied among taxa and were significantly correlated with LMA and petiole length, suggesting mechanisms of heat dissipation and leaf movability that link simple traits to gas exchange and productivity. Weighted multiple linear regression models explained 80%–91% of variation in biomass production and iWUE. Models using only LMA, petiole length, and stomatal metrics performed nearly as well as those incorporating N %, and δ 13 C, with complex traits adding approximately 10% explanatory power. These results demonstrate that simple morphological traits capture integrated functional trade-offs, while complex traits refine predictions. This tiered approach provides an efficient framework for selecting high-yielding, water-efficient genotypes of Populus and other hardwood species, offering practical pathways to enhance carbon uptake and iWUE under climate change.

biomass production↗