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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 235 records · Page 13
All sourcesNASA NTRSDOE OSTI
DOE OSTI2019

An archaeal symbiont-host association from the deep terrestrial subsurface

DPANN archaea have reduced metabolic capacities and are diverse and abundant in deep aquifer ecosystems, but little is known about their interactions with other microorganisms that reside there. In this work, we offer evidence for an archaeal host-symbiont association from a deep aquifer system at the Colorado Plateau (Utah, USA). The symbiont, Candidatus Huberiarchaeum crystalense , and its host, Ca. Altiarchaeum hamiconexum , show a highly significant co-occurrence pattern over 65 metagenome samples collected over six years. The physical association of the two organisms was confirmed with genome-informed fluorescence in situ hybridization depicting small cocci of Ca. H. crystalense attached to Ca. A. hamiconexum cells. Based on genomic information, Ca. H. crystalense potentially scavenges vitamins, sugars, nucleotides, and reduced redox-equivalents from its host and thus has a similar metabolism as Nanoarchaeum equitans . These findings give insight into host-symbiont interactions among members of two uncultivated archaeal phyla that thrive in a deep subsurface aquifer.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2015

Comparative genomics, proteomics and transcriptomics give new insight into the exoproteome of the basidiomycete H ebeloma cylindrosporum and its involvement in ectomycorrhizal symbiosis

Summary Extracellular proteins play crucial roles in the interaction between mycorrhizal fungi and their environment. Computational prediction and experimental detection allowed identification of 869 proteins constituting the exoproteome of Hebeloma cylindrosporum . Small secreted proteins ( SSP s) and carbohydrate‐active enzymes ( CAZ ymes) were the two major classes of extracellular proteins. Twenty‐eight per cent of the SSP s were secreted by free‐living mycelia and five of the 10 most abundant extracellular proteins were SSP s. By contrast, 63–75% of enzymes involved in nutrient acquisition were secreted. A total of 150 extracellular protein‐coding genes were differentially expressed between mycorrhizas and free‐living mycelia. SSP s were the most affected. External environmental conditions also affected expression of 199 exoproteome genes in mycorrhizas. SSP s displayed different patterns of regulation in response to presence of a host plant or other environmental signals. Several of the genes most overexpressed in the presence of organic matter encoded oxidoreductases. Hebeloma cylindrosporum has not fully lost its ancestral saprotrophic capacities but rather adapted them not to harm its hosts and to use soil organic nitrogen. The complex and divergent patterns of regulation of SSP s in response to a symbiotic partner and/or organic matter suggest various roles in the biology of mycorrhizal fungi.

Doré, Jeanne↗
DOE OSTI2013

Revisit Carbon/Sulfur Composite for Li-S Batteries

To correlate the carbon properties e.g. surface area and porous structure, with the electrochemical behaviors of carbon/sulfur (C/S) composite cathodes for lithium-sulfur (Li-S) batteries, four different carbon frameworks including Ketjen Black (KB, high surface area and porous), Graphene (high surface area and nonporous), Acetylene Black (AB, low surface area and nonporous) and Hollow Carbon Nano Sphere (HCNS, low surface area and porous) are employed to immobilize sulfur (80 wt.%). It has been revealed that high surface area of carbon improves the utilization rate of active sulfur and decreases the real current density during the electrochemical reactions. Accordingly, increased reversible capacities and reduced polarization are observed for high surface area carbon hosts such as KB/S and graphene/S composites. The porous structure of KB or HCNS matrix promotes the long-term cycling stability of C/S composites but only at relatively low rate (0.2 C). Once the current density increases, the pore effect completely disappears and all Li-S batteries show similar trend of capacity degradation regardless of the different carbon hosts used in the cathodes. The reason has been assigned to the formation of reduced amount of irreversible Li2S on the cathode as well as shortened time for polysulfides to transport towards lithium anode at elevated current densities. This work provides valuable information for predictive selection on carbon materials to construct C/S composite for practical applications from the electrochemical point of view.

Environmental Molecular Sciences Laboratory↗
DOE OSTI2021

Heat capacity and thermodynamic functions of partially dehydrated sodium and zinc zeolite A (LTA)

Zeolite A (LTA) is an industrially important zeolite that exhibits sorption-induced framework flexibility, the thermodynamics of which are poorly understood. In this work, we report heat capacity measurements on zinc and sodium zeolite A from 1.8 to 300 K and compare the heat capacity of water in sodium zeolite A with that of water in other zeolites. The heat capacity of zeolitic water varies significantly depending on the hydration level and identity of the host zeolite, and more tightly bound water exhibits strong inflections in its heat capacity curve. This suggests a combination of effects, including differences in water-framework binding strength and hydration-dependent flexibility transitions. We also report fits of the heat capacity data using theoretical functions, and we report values for $C_{P,m}^°$,$Δ_0^TS_m^°$,$Δ_0^TH_m^°$, and $Φ_m^°$ from 0 to 300 K. These results contribute to a systematic thermodynamic understanding of the effects of cation exchange, guest molecule confinement, and sorbate-dependent flexibility transitions in zeolites.

Geochemistry & Geophysics↗
DOE OSTI2024

PLUSWIND Hourly Plant-Level Power

These data contain the hourly plant-level power time series from PLUSWIND. The time series is derived from the HRRR model and corrected for density and losses. The PLUSWIND dataset hosted on the Wind Data Hub here (https://a2e.energy.gov/project/pluswind) contains additional versions with meteorological corrections. Data are provided for years 2018 - 2021. The data hosted at this location include conversion from capacity factor output (normalized output) to total hourly production (units of MW).

17 WIND ENERGY↗
DOE OSTI2013

Genome sequence of Ensifer medicae strain WSM1115; an acid-tolerant Medicago-nodulating microsymbiont from Samothraki, Greece

Ensifer medicae strain WSM1115 forms effective nitrogen fixing symbioses with a range of annual Medicago species and is used in commercial inoculants in Australia. WSM1115 is an aerobic, motile, Gram-negative, non-spore-forming rod. It was isolated from a nodule recovered from the root of burr medic (Medicago polymorpha) collected on the Greek Island of Samothraki. WSM1115 has a broad host range for nodulation and N2 fixation capacity within the genus Medicago, although this does not extend to all medic species. WSM1115 is considered saprophytically competent in moderately acid soils (pH(CaCl2 ) 5.0), but it has failed to persist at field sites where soil salinity exceeded 10 ECe (dS/m). Here we describe the features of E. medicae strain WSM1115, together with genome sequence information and its annotation. The 6,861,065 bp high-quality-draft genome is arranged into 7 scaffolds of 28 contigs, contains 6,789 protein-coding genes and 83 RNA-only encoding genes, and is one of 100 rhizobial genomes sequenced as part of the DOE Joint Genome Institute 2010 Genomic Encyclopedia for Bacteria and Archaea-Root Nodule Bacteria (GEBA-RNB) project.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2019

Lithium Metal Anode Materials Design: Interphase and Host

Abstract Li metal is the ultimate anode choice due to its highest theoretical capacity and lowest electrode potential, but it is far from practical applications with its poor cycle lifetime. Recent research progresses show that materials designs of interphase and host structures for Li metal are two effective ways addressing the key issues of Li metal anodes. Despite the exciting improvement on Li metal cycling capability, problems still exist with these methodologies, such as the deficient long-time cycling stability of interphase materials and the accelerated Li corrosion for high surface area three-dimensional composite Li anodes. As a result, Coulombic efficiency of Li metal is still not sufficient for full-cell cycling. In the near future, an interphase protected three-dimensional composite Li metal anode, combined with high performance novel electrolytes might be the ultimate solution. Besides, nanoscale characterization technologies are also vital for guiding future Li metal anode designs. Graphic Abstract

Wang, Hansen↗
DOE OSTI2017

Yolk–Shelled C@Fe 3 O 4 Nanoboxes as Efficient Sulfur Hosts for High‐Performance Lithium–Sulfur Batteries

Owing to the high theoretical specific capacity (1675 mA h g −1 ) and low cost, lithium–sulfur (Li–S) batteries offer advantages for next‐generation energy storage. However, the polysulfide dissolution and low electronic conductivity of sulfur cathodes limit the practical application of Li–S batteries. To address such issues, well‐designed yolk–shelled carbon@Fe 3 O 4 (YSC@Fe 3 O 4 ) nanoboxes as highly efficient sulfur hosts for Li–S batteries are reported here. With both physical entrapment by carbon shells and strong chemical interaction with Fe 3 O 4 cores, this unique architecture immobilizes the active material and inhibits diffusion of the polysulfide intermediates. Moreover, due to their high conductivity, the carbon shells and the polar Fe 3 O 4 cores facilitate fast electron/ion transport and promote continuous reactivation of the active material during the charge/discharge process, resulting in improved electrochemical utilization and reversibility. With these merits, the S/YSC@Fe 3 O 4 cathodes support high sulfur content (80 wt%) and loading (5.5 mg cm −2 ) and deliver high specific capacity, excellent rate capacity, and long cycling stability. This work provides a new perspective to design a carbon/metal‐oxide‐based yolk–shelled framework as a high sulfur‐loading host for advanced Li–S batteries with superior electrochemical properties.

He, Jiarui↗
DOE OSTI2018

Modeling the Pseudomonas Sulfur Regulome by Quantifying the Storage and Communication of Information

ABSTRACT Bacteria are not simply passive consumers of nutrients or merely steady-state systems. Rather, bacteria are active participants in their environments, collecting information from their surroundings and processing and using that information to adapt their behavior and optimize survival. The bacterial regulome is the set of physical interactions that link environmental information to the expression of genes by way of networks of sensors, transporters, signal cascades, and transcription factors. As bacteria cannot have one dedicated sensor and regulatory response system for every possible condition that they may encounter, the sensor systems must respond to a variety of overlapping stimuli and collate multiple forms of information to make “decisions” about the most appropriate response to a specific set of environmental conditions. Here, we analyze Pseudomonas fluorescens transcriptional responses to multiple sulfur nutrient sources to generate a predictive, computational model of the sulfur regulome. To model the regulome, we utilize a transmitter-channel-receiver scheme of information transfer and utilize principles from information theory to portray P. fluorescens as an informatics system. This approach enables us to exploit the well-established metrics associated with information theory to model the sulfur regulome. Our computational modeling analysis results in the accurate prediction of gene expression patterns in response to the specific sulfur nutrient environments and provides insights into the molecular mechanisms of Pseudomonas sensory capabilities and gene regulatory networks. In addition, modeling the bacterial regulome using the tools of information theory is a powerful and generalizable approach that will have multiple future applications to other bacterial regulomes. IMPORTANCE Bacteria sense and respond to their environments using a sophisticated array of sensors and regulatory networks to optimize their fitness and survival in a constantly changing environment. Understanding how these regulatory and sensory networks work will provide the capacity to predict bacterial behaviors and, potentially, to manipulate their interactions with an environment or host. Leveraging the information theory provides useful quantitative metrics for modeling the information processing capacity of bacterial regulatory networks. As our model accurately predicted gene expression profiles in a bacterial model system, we posit that the information theory-based approaches will be important to enhance our understanding of a wide variety of bacterial regulomes and our ability to engineer bacterial sensory and regulatory networks.

Larsen, Peter E.↗
DOE OSTI2018

Understanding the critical chemistry to inhibit lithium consumption in lean lithium metal composite anodes

Lithium metal has been deemed by many as the “Holy Grail” of anode materials due to its high theoretical capacity (~3860 mA h g -1 ), redox potential of -3.040 V vs. SHE, and light weight. The goal of this work is to investigate the relationship between a lean lithium metal anode and its consumption as a function of host materials, electrochemical protocol and electrolyte composition. With the use of carbon nanofibers, lithium metal has been electrodeposited onto the host matrix and used in a battery with a LiNi 0.6 Mn 0.2 Co 0.2 O 2 cathode. The mass-loading of lithium can be easily controlled and utilized to investigate the practicality of an anode limited battery (i.e., limited lithium with an effective thickness <15 μm) in a high surface area matrix. We then quantify the consumption rate of active lithium using different electrolyte additives and current rates in full cells and observe that the lithium consumption behavior in an anode-limited cell is different from that in an anode-excess cell. Our results highlight the necessity of applying truly lithium-limited cells when evaluating the electrochemical properties of lithium anodes and electrolyte additives. By extending this method to a standard graphite host, full cells can retain 75% of their initial capacities after 1000 cycles. The present study demonstrates the importance of graphitic carbon in increasing the lifespan of limited lithium (<15 μm) for practical lithium metal batteries.

25 ENERGY STORAGE↗
DOE OSTI2019

Highly efficient removal of both cationic and anionic dyes from wastewater with a water-stable and eco-friendly Fe-MOF via host-guest encapsulation

Here, a water-stable cationic Fe based metal organic framework, CPM-97-Fe, was successfully synthesized in a large scale by a modified method (CPM: Crystalline Porous Materials). The adsorption behaviors, including removal efficiency, adsorption kinetics and isotherms of nine hazardous dyes in wastewater were investigated with different pH and organic solvents. The pseudo-second-order adsorption rate constant follows the order of Reactive Brilliant Red X-3B (X-3B, 0.0205 g mg -1 min -1 ) > Acid orange 7 (AO7, 0.0112 g mg -1 min -1 ) > Congo Red (CR, 0.0080 g mg -1 min -1 ) > Methylene Blue (MB, 0.0061 g mg -1 min -1 ) > Rhodamine B (RhB, 0.0049 g mg -1 min -1 ) > Croscein Scarlet 3B (CS3B, 0.0041 g mg -1 min -1 ) > Methyl Blue (MB, 0.0017 g mg -1 min -1 ) = New Coccine (NC, 0.0017 g mg -1 min -1 ) > Acid Black 1 (AB1, 0.0014 g mg -1 min -1 ). It is found that the adsorption quasi-equilibrium can reach quickly within 30 min, but the dyes with proper structure (i.e. proper distance between two sulfonic groups, less azo benzene hindrance effect, more reactive Cl groups, and more benzene rings), smaller molecular size, more negative charges, lower molecular mass favor the faster adsorption. The adsorption capacity obeys another sequence of CR (831 mg g -1 ) > X-3B (648 mg g -1 ) > AO7 (502 mg g -1 ) > MLB (380 mg g -1 ) > CS3B (356 mg g -1 ) > AB1 (325 mg g -1 ) > RhB (306 mg g -1 ) > MB (304 mg g -1 ) > NC (157 mg g -1 ). It is disclosed that CPM-97-Fe can adsorb more dyes with larger molecular mass, less negative charges, and a proper structure. Especially for Congo red, the adsorption capacity on CPM-97-Fe is 831 mgg -1 , 8.1 times that on activated carbon (103 mgg -1 ). Even the adsorption capacities of very bulky Rhodamine B and Methyl Blue reach as high as 306 and 304 mgg -1 , respectively, ranking the highest level among MOF materials. Moreover, the special structure of CPM-97-Fe with big open windows and high specific surface area of 1397.0 m 2 g -1 contributes to the fast adsorption and high capacity towards all investigated dyes via the host-guest encapsulation mechanism including electrostatic interaction, ion exchange, π-π stacking interaction, as well as pore filling.

36 MATERIALS SCIENCE↗
DOE OSTI2020

Dual Functional Ni3S2@Ni Core-Shell Nanoparticles Decorating Nanoporous Carbon as Cathode Scaffolds for Lithium-Sulfur Battery with Lean Electrolytes

Lithium-sulfur batteries are very promising for next-generation energy storage. However, most studies use flooded electrolytes to achieve a high specific capacity at the expense of lowering the specific energy. Understanding lithium-sulfur battery performance with lean electrolytes is highly desirable. Herein, a modified Pechini method is developed to synthesize a nanoporous carbon host decorated with Ni3S2@Ni particles. Such a cathode delivers enhanced specific capacities with extended cycling life in lean electrolytes, due to the dual functions of the Ni3S2 shell, which can both facilitate reaction kinetics and promote electrolyte wetting. This work highlights a strategy to rationally design cathodes for highenergy lithium-sulfur batteries.

Zhang, Yulun↗
DOE OSTI2016

Regional quantitative play fairway analysis: methodology global examples and application for the East African Rift system

Most volcanic arcs and active rifts around the world host producing geothermal systems. Many undiscovered and/or undeveloped systems remain in each of these areas, including magmatic-heated systems, amagmatic extension-related systems, and blind resources lacking active surface manifestations in both types of settings. However, not all volcanic centers or extensional terranes have the same geothermal potential. For example, even when high heat flow is present, permeability is commonly a limiting factor to resource development. A tool recently adapted for the geothermal industry is play fairway analysis, which calculates the regional probability of power-capable resources based on the spatial coincidence of key geologic conditions. In a geothermal setting, these key geologic conditions are heat, permeability, and fluids. Higher enthalpy systems also benefit from suitable cap rock. These parameters can be assessed through multiple geologic, geochemical, and geophysical data sets and integrated quantitatively to produce a single geothermal play fairway map. Potential input data sets include but are not limited to: 1) tectonic setting; 2) structural setting; 3) faults attributed by recency of rupture and slip rate; 3) geodetic crustal stain models; 5) gravity; 6) earthquake distribution; 7) thermal models; 8) geochemistry from springs, wells, and fumaroles; 9) temperature from springs, wells, and fumaroles; 10) fumarole size and type; and 11) age of volcanism. Recent play fairway studies have been completed for volcanic arcs and the dominantly amagmatic, extensional Great Basin region, USA, but have yet to be applied to the East African Rift System (EARS). Previous estimates of total geothermal resource capacity in the EARS is ~20 GWe, but only three areas are currently in production as of 2015: Olkaria and Eburru in Kenya, and Aluto-Langano in Ethiopia for a total installed capacity of <0.7 GWe. Many more volcanic centers host potential resources. In addition, amagmatic and/or blind systems also have potential in the EARS. Play fairway analysis can highlight regions most prospective for geothermal resource development, help identify locations prospective for undiscovered resources, prioritize overall exploration and development efforts, and refine estimates for total undeveloped resource potential.

15 GEOTHERMAL ENERGY↗
DOE OSTI2023

Revolutionizing Porous Liquids: Stabilization and Structural Engineering Achieved by a Surface Deposition Strategy

Facile approaches capable of constructing stable and structurally diverse porous liquids (PLs) that can deliver high-performance applications are a long-standing, captivating, and challenging research area that requires significant attention. Here, in this work, a facile surface deposition strategy is demonstrated to afford diverse type III-PLs possessing ultra-stable dispersion, external structure modification, and enhanced performance in gas storage and transformation by leveraging the expeditious and uniform precipitation of selected metal salts. The Ag(I) species-modified zeolite nanosheets are deployed as the porous host to construct type III-PLs with ionic liquids (ILs) containing bromide anion , leading to stable dispersion driven by the formation of AgBr nanoparticles. The as-afforded type-III PLs display promising performance in CO 2 capture/conversion and ethylene/ethane separation. Property and performance of the as-produced PLs can be tuned by the cation structure of the ILs, which can be harnessed to achieve polarity reversal of the porous host via ionic exchange. The surface deposition procedure can be further extended to produce PLs from Ba(II)-functionalized zeolite and ILs containing [SO 4 ] 2– anion driven by the formation of BaSO 4 salts. The as-produced PLs are featured by well-maintained crystallinity of the porous host, good fluidity and stability, enhanced gas uptake capacity, and attractive performance in small gas molecule utilization.

36 MATERIALS SCIENCE↗
DOE OSTI2016

In situ characterization of charge rate dependent stress and structure changes in V 2 O 5 cathode prepared by atomic layer deposition

Here, the insertion/extraction of lithium into/from various host materials is the basic process by which lithium-ion batteries reversible store charge. This process is generally accompanied by strain in the host material, inducing stress which can lead to capacity loss. Therefore, understanding of both the structural changes and the associated stress – investigated almost exclusively separate to date – is a critical factor for developing high-performance batteries. Here, we report an in situ method, which utilizes Raman spectroscopy in parallel with optical interferometry to study effects of varying charging rates (C-rates) on the structure and stress in a V 2 O 5 thin film cathode. Abrupt stress changes at specific crystal phase transitions in the Li—V—O system are observed and the magnitude of the stress changes with the amount of lithium inserted into the electrode are correlated. A linear increase in the stress as a function of x in Li x V 2 O 5 is observed, indicating that C-rate does not directly contribute to larger intercalation stress. However, a more rapid increase in disorder within the Li x V 2 O 5 layers is correlated with higher C-rate. Ultimately, these experiments demonstrate how the simultaneous stress/Raman in situ approach can be utilized as a characterization platform for investigating various critical factors affecting lithium-ion battery performance.

25 ENERGY STORAGE↗
DOE OSTI2013

Design, testing and emplacement of sand-bentonite for the construction of a gas-permeable seal test (gast)

The main aim of a gas-permeable seal is to increase the gas transport capacity of the backfilled underground structures without compromising the radionuclide retention capacity of the engineered barrier system or the host rock. Such a seal, proposed by NAGRA as part of the 'Engineered Gas Transport System' in a L/ILW repository, considers specially designed backfill and sealing materials such as sand/bentonite (S/B) mixtures with a bentonite content of 20- 30%. NAGRA's RD and D plan foresees demonstrating the construction and performance of repository seals and improving the understanding and the database for reliably predicting water and gas transport through these systems. The fluid flow and gas transport properties of these backfills have been determined at the laboratory scale and through modelling the maximum gas pressures in the near field of a repository system and the gas flow rates have been evaluated. Within this context, the Gas-permeable Seal Test (GAST) was constructed at Grimsel Test Site (GTS) to validate the effective functioning of gas-permeable seals at realistic scale. The intrinsic permeability of such seals should be in the order of 10-18 m2. Because the construction of S/B seals is not common practice for construction companies, a stepwise approach was followed to evaluate different construction and quality assurance methods. As a first step, an investigation campaign with simple tests in the laboratory and in the field followed by 1:1 scale pre-tests at GTS was performed. Through this gradual increase of the degree of complexity, practical experience was gained and confidence in the methods and procedures to be used was built, which allowed reliably producing and working with S/B mixtures at a realistic scale. During the whole pre-testing phase, a quality assurance (QA) programme for S/B mixtures was developed and different methods were assessed. They helped to evaluate and choose appropriate emplacement techniques and methodologies to achieve the target S/B dry density of 1.70 g/cm{sup 3}, which results in the desired intrinsic permeability throughout the experiment. The final QA methodology was targeted at engineering measures to decide if the work can proceed, and at producing high resolution material properties database for future water and gas transport modelling activities. The different applied QA techniques included standard core cutter tests, the application of neutron-gamma (Troxler) probes and two mass balance methods (2D and 3D). The methods, looking at different representative scales, have provided only slightly different results and showed that the average density of the emplaced S/B plug was between 1.65 and 1.73 g/cm{sup 3}. Spatial variability of dry densities was observed at decimeter scale. Overall, the pre-testing and QA programme performed for the GAST project demonstrated how the given design criteria and requirements can be met by appropriately planning and designing the material emplacement. (authors)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
DOE OSTI2023

Herbivorous Fish Microbiome Adaptations to Sulfated Dietary Polysaccharides

Marine herbivorous fish that feed primarily on macroalgae, such as those from the genus Kyphosus, are essential for maintaining coral health and abundance on tropical reefs. Here, deep metagenomic sequencing and assembly of gut compartment-specific samples from three sympatric, macroalgivorous Hawaiian kyphosid species have been used to connect host gut microbial taxa with predicted protein functional capacities likely to contribute to efficient macroalgal digestion. Bacterial community compositions, algal dietary sources, and predicted enzyme functionalities were analyzed in parallel for 16 metagenomes spanning the mid- and hindgut digestive regions of wild-caught fishes. Gene colocalization patterns of expanded carbohydrate (CAZy) and sulfatase (SulfAtlas) digestive enzyme families on assembled contigs were used to identify likely polysaccharide utilization locus associations and to visualize potential cooperative networks of extracellularly exported proteins targeting complex sulfated polysaccharides. These insights into the gut microbiota of herbivorous marine fish and their functional capabilities improve our understanding of the enzymes and microorganisms involved in digesting complex macroalgal sulfated polysaccharides.

09 BIOMASS FUELS↗
DOE OSTI2016

Nutrient cycling for biomass: Interactive proteomic/transcriptomic networks for global carbon management processes within poplar-mycorrhizal interactions

This project addresses the need to develop system-scale models at the symbiotic interface between ectomycorrhizal fungi (Laccaria bicolor) and tree species (Populus tremuloides) in response to environmental nutrient availability / biochemistry. Using our now well-established laboratory Laccaria x poplar system, we address the hypothesis that essential regulatory and metabolic mechanisms can be inferred from genomic, transcriptomic and proteomic-level changes that occur in response to environmental nutrient availability. The project addresses this hypothesis by applying state-of-the-art protein-level analytic approaches to fill the gap in our understanding of how mycorrhizal regulatory and metabolic processes at the transcript-level translate to nutrient uptake, carbon management and ultimate net primary productivity of plants. In most cases, these techniques were not previously optimized for poplar trees or Laccaria. Thus, one of the major contributions of this project has been to provide avenues for new research in these species by overcoming the pitfalls that had previously prevented the use of techniques such as ChIP-Seq and SWATH-proteomics. Since it is the proteins that sense and interact with the environment, participate in signal cascades, activate and regulate gene expression, perform the activities of metabolism and ultimately sequester carbon and generate biomass, an understanding of protein activities during symbiosis-linked nutrient uptake is critical to any systems-level approach that links metabolic processes to the environment. This project uses a team of experts at The University of Alabama in Huntsville (UAH), The University of Alabama at Birmingham (UAB) and Argonne National Laboratory (ANL) to address the above hypothesis using a multiple "omics" approach that combines gene and protein expression as well as protein modifications, and biochemical analyses (performed at Brookhaven National Laboratory (BNL)) in poplar trees under mycorrhizal and free living conditions. Together, the assembled team of experts completed all of the planned milestones set forth in this project. In addition to the planned approaches, several lines of exciting new research have also evolved during the course of this project that involved FTIR Imaging using the National Synchrotron Light Source at BNL. A summary of the approaches used in this project and key highlights are as follows: Having the right combination of microbes associated with plants is largely responsible for the plant’s ability to mine nutrients from the soil and to develop a strong “immune system”. Our current chemically focused and intensive culture tends to forget that plants obtain nutrients in two ways: (1) via water soluble chemical nutrients and (2) via the activity of acquired microbial symbionts. In healthy natural ecosystems, chemical nutrients are always in low abundance because the organisms within that system have already locked such nutrients away within the biological system itself. Thus, in nature it is the biological sources of nutrients and the microbes that have the capacity to mine those nutrients for their plant hosts that actually control the terrestrial nutrient cycles on this planet. Thus, a new push in the future may very well be to use our skills at elucidating complex patterns to strategically guide soil microbe communities to do what we want, essentially allowing nature to do the work of figuring out what is most efficient and effective for human needs. However, the findings of this project and other work in our lab lead to the hypothesis that the specific soil community composition is less important than the emergent properties of those communities. So, additional research into what soil communities are effective and how they are established will be key in developing human understanding of how to manipulate biological systems to meet human needs without causing undue damage to our environment.

59 BASIC BIOLOGICAL SCIENCES↗