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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 235 records · Page 13
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Zinc chloride affects chondrogenesis via VEGF signaling

Highlights: • ZnCl2 increases expression of various chondrogenic signaling intermediates. • VEGF/VEGFR play a key role in modulating levels of chondrogenesis. • Insulin mimetics are an appealing option for improvement of fracture healing. • Axitinib + ZnCl2 treatment results in decreased transcription of chondrogenic genes. Insulin mimetics, including zinc containing compounds, have previously been shown to influence chondrogenesis as it relates to healing of fractures in various preclinical models. However, the mechanism by which these compounds drive chondrogenic differentiation is yet undefined. Here, via next-generation sequencing (NGS) and in vitro functional validation, we show that Zinc Chloride (ZnCl{sub 2}) induces expression of both chondrogenic genes (Sox9, Runx1, collagen) as well as genes associated with VEGF-mediated signal transduction, including VEGF receptors 1 and 2 and their ligands; VEGF-A and VEGF-B. Noticeably, although insulin was able to also induce expression of these pro-angiogenic and pro-chondrogenic genes, the impact of insulin on expression of VEGF receptor and ligand genes was marginal when compared to that of ZnCl{sub 2.} Furthermore, while the VEGFR antagonist, Axitinib, was able to attenuate the pro-chondrogenic effects of both insulin and ZnCl{sub 2}; a reduction in gene and protein expression was most profoundly observed when the antagonist was applied to cells treated with ZnCl{sub 2.} Taken together, these data suggest an important role for the VEGF-mediated signal transduction pathways in the positive effects observed when applying zinc-based compounds as adjuvants for chondrogenesis-mediated fracture healing. In this regard, further mechanistic evaluation of ZnCl{sub 2} and other zinc-containing insulin mimetics may support rational design of therapies targeted for disease indications associated with impaired fracture healing.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2019

Direct construction of optimized stellarator shapes. Part 2. Numerical quasisymmetric solutions

Quasisymmetric stellarators are appealing intellectually and as fusion reactor candidates since the guiding-centre particle trajectories and neoclassical transport are isomorphic to those in a tokamak, implying good confinement. Previously, quasisymmetric magnetic fields have been identified by applying black-box optimization algorithms to minimize symmetry-breaking Fourier modes of the field strength $B$ . Here, instead, we directly construct magnetic fields in cylindrical coordinates that are quasisymmetric to leading order in the distance from the magnetic axis, without using optimization. The approach involves solution of a one-dimensional nonlinear ordinary differential equation, originally derived by Garren & Boozer ( Phys. Fluids B, vol. 3, 1991, p. 2805). We illustrate the usefulness and accuracy of this optimization-free approach by providing the results of this construction as input to the codes VMEC and BOOZ_XFORM, confirming the purity and scaling of the magnetic spectrum. The space of magnetic fields that are quasisymmetric to this order is parameterized by the magnetic axis shape along with three other real numbers, one of which reflects the on-axis toroidal current density, and another one of which is zero for stellarator symmetry. The method here could be used to generate good initial conditions for conventional optimization, and its speed enables exhaustive searches of parameter space.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2020

A general metriplectic framework with application to dissipative extended magnetohydrodynamics

General equations for conservative yet dissipative (entropy producing) extended magnetohydrodynamics are derived from two-fluid theory. Keeping all terms generates unusual cross-effects, such as thermophoresis and a current viscosity that mixes with the usual velocity viscosity. While the Poisson bracket of the ideal version of this model has already been discovered, we determine its metriplectic counterpart that describes the dissipation. This is done using a new and general thermodynamic point of view to derive dissipative brackets, a means of derivation that is natural for understanding and creating dissipative dynamics without appealing to underlying kinetic theory orderings. Finally, the formalism is used to study dissipation in the Lagrangian variable picture where, in the context of extended magnetohydrodynamics, non-local dissipative brackets naturally emerge.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2021

EBSD of Rough Native CuInGaSe2 Thin-Films

The polycrystalline Cu (In, Ga) Se2, or CIGS, based thin-film materials system has long been studied for use in photovoltaic technologies, where its bandgap tunability, mechanical flexibility, and relatively low production costs are all appealing. Nonetheless, significant defect populations, which serve to reduce efficiency, create performance instabilities, and increase concerns about long-term reliability, have hindered wide-scale adoption. Prior work, including application of a scanning probe based deep level trap spectroscopy (SP-DLTS) defect mapping technique and scanning transmission electron microscope (STEM) based electron energy loss spectroscopy (EELS), has shown that the most detrimental defects, with energy level near mid-gap (thus serving as a carrier recombination center), are most likely caused by CuIn/Ga antisites and tend to cluster at or around certain grain boundaries [1,2]. However, the exact nature of these particular boundaries — their structures, chemistries, or even the relative misorientation of their associated grains — and their relation to this defect clustering and/or its formation is yet unknown. As such, electron backscatter diffraction (EBSD) orientation mapping, directly correlated with defect-sensitive techniques like SP-DLTS and/or STEM-EELS, could prove critical for providing the final missing links toward understanding the mechanisms behind these defects. Indeed, recent studies using correlative electron beam induced current (EBIC) with EBSD have been able to identify boundaries, and their relative misorientations, that possess detrimental electronic properties [3]. However, because EBIC is unable to resolve the defect energy levels, many questions are left unanswered. Furthermore, this study, and others like it, employed focused ion beam (FIB) milling to flatten the natively-rough CIGS [3-5], which may run the risk of changing the nature of any near-surface defect structures.

14 SOLAR ENERGY↗
DOE OSTI2021

In Situ Wood Delignification toward Sustainable Applications

As one of the most abundant and versatile natural materials on Earth, recently wood has attracted tremendous attention from scientists and engineers due to its outstanding advantages, including hierarchically porous microstructure, high mechanical strength, environmental friendliness, renewability, and biodegradability. Wood’s hierarchically porous structure and chemical components (e.g., cellulose, hemicelluloses, and lignin) enable its mechanical, ionic, optical, and thermal properties to be tuned via physical, chemical, and/or thermal modifications. Among these various approaches, the chemical delignification of bulk wood is the most fascinating, in which the majority of lignin and hemicelluloses is removed while leaving the cellulose intact, maintaining wood’s physical integrity and hierarchical structure. This delignified structure is unique, composed of hollow, aligned channels made up of cellulose microfibrils, and particularly attractive given its origin from a sustainable and renewable resource. As a result, delignified wood has attracted increasing attention for applications that go far beyond traditional wood utilization, such as lightweight yet strong structural materials, energy storage and conversion, environmental remediation, flexible electronics, and bioengineering. Here, we review recent developments in bulk wood delignification strategies toward the achievement of such advanced wood technologies for sustainable applications, with a focus on the research in our group. Similar to chemical pulping and bleaching, wood delignification involves a series of nucleophilic reactions based on alkaline Na 2 SO 3 or Na 2 S systems (i.e., chemical pulping) or electrophilic, radical, and oxidation reactions based on H 2 O 2 , ClO 2 , or NaClO systems (i.e., chemical bleaching) to deconstruct, fragment, and promote the hydrophilicity of lignin macromolecules, which finally make lignin easier to be removed. We discuss the structure and properties of partially and near-completely delignified wood, with a focus on process-structure–property relationships. The resulting delignified wood materials, with tunable structure and properties, demonstrate various advanced functions, in a wide range of advanced applications, such as building and construction, green energy, and electronics. Finally, the potential challenges and appealing perspectives of in situ wood delignification are discussed. In situ wood delignification, as a powerful modification strategy, has speeded up the development of advanced wood technologies and wood-based functional materials and products.

36 MATERIALS SCIENCE↗
DOE OSTI2018

Nanocellulose toward Advanced Energy Storage Devices: Structure and Electrochemistry

We report that cellulose is the most abundant biopolymer on Earth and has long been used as a sustainable building block of conventional paper. Note that nanocellulose accounts for nearly 40% of wood’s weight and can be extracted using well-developed methods. Due to its appealing mechanical and electrochemical properties, including high specific modulus (~100 GPa/(g/cm 3 )), excellent stability in most solvents, and stability over a wide electrochemical window, nanocellulose has been widely used as a separator, electrolyte, binder, and substrate material for energy storage. Additionally, nanocellulose-derived carbon materials have also drawn increasing scientific interest in sustainable energy storage due to their low-cost and raw-material abundance, high conductivity, and rational electrochemical performance. The inexpensive and environmentally friendly nature of nanocellulose and its derivatives as well as simple fabrication techniques make nanocellulose-based energy storage devices promising candidates for the future of “green” and renewable electronics. For nanocellulose-based energy storage, structure engineering and design play a vital role in achieving desired electrochemical properties and performances. Thus, it is important to identify suitable structure and design engineering strategies and to better understand their relationship. In this Account, we review recent developments in nanocellulose-based energy storage. Due to the limited space, we will mainly focus on structure design and engineering strategies in macrofiber, paper, and three-dimensional (3D) structured electrochemical energy storage (EES) devices and highlight progress made in our group. We first present the structure and properties of nanocellulose, with a particular discussion of nanocellulose from wood materials. We then go on to discuss studies on nanocellulose-based macrofiber, paper, and 3D wood- and other aerogel-based EES devices. Within this discussion, we highlight the use of natural nanocellulose as a flexible substrate for a macrofiber supercapacitor and an excellent electrolyte reservoir for a breathable textile lithium–oxygen battery. Paper batteries and supercapacitors using nanocellulose as a green dispersant, nanocellulose-based paper as a flexible substrate, and nanocellulose as separator and electrolyte are also examined. We highlight recent progress on wood-based batteries and supercapacitors, focusing on the advantages of wood materials for energy storage, the structure design and engineering strategies, and their microstructure and electrochemical properties. We discuss the influence of structure (particularly pores) on the electrochemical performance of the energy storage devices. By taking advantage of the straight, nature-made channels in wood materials, ultrathick, highly loaded, and low-tortuosity energy storage devices are demonstrated. Lastly, we offer concluding remarks on the challenges and directions of future research in the field of nanocellulose-based energy storage devices.

25 ENERGY STORAGE↗
DOE OSTI2020

Impact of Residual Lithium on the Adoption of High-Nickel Layered Oxide Cathodes for Lithium-Ion Batteries

High-nickel layered oxide cathodes are becoming appealing for lithium-ion batteries employed in portable electronics and electric vehicles because of their higher energy density, low or no cobalt content, and ability to be manufactured with existing infrastructure. However, high-nickel layered oxides are plagued by the formation of residual lithium species, such as LiOH and Li 2 CO 3 , on the surface, which are detrimental to the manufacturing process and performance. Despite the problems residual lithium causes for the industry, academia mainly focuses on the safety risks and electrochemical impacts of residual lithium. In this Perspective, we examine the residual lithium problem through a lens of its impact on cathode slurry instability and large-scale manufacturing of high-nickel layered oxides. Additionally, methods of measuring residual lithium are discussed from the perspective of their accuracy as well as practicality in the manufacturing process. Furthermore, we hope that this Perspective would encourage the academic endeavor to consider the practical obstacles caused by residual lithium on the industrialization of high-nickel layered oxides and their mitigation, while attempting to improve their electrochemical performance and safety through doping, surface modifications, or other approaches.

25 ENERGY STORAGE↗
DOE OSTI2023

Site-Selective Atomic Layer Deposition at Thermally Generated Surface Oxygen Vacancies on Rutile TiO 2

Unique atomic arrangements (i.e., defects) on material surfaces may exhibit distinctive reactivity that affords opportunities for selective surface chemistry exclusively at those sites. While theoretically appealing, site-selective atomic layer deposition (ALD) processes remain largely unrealized experimentally. Here we provide evidence for site-selective ALD that exclusively targets oxygen vacancies thermally generated at the surface of TiO 2 single crystals. High-resolution in situ ellipsometry reveals the nucleation behavior of dimethylaluminum isopropoxide (DMAI) and water at process conditions precisely tuned for selective hydroxylation of surface defects. An island growth model for nucleation and atomic force microscopy (AFM) imaging are consistent with a site-selective growth mechanism that depends on the surface oxygen vacancy density. This approach to direct ALD reactions at defective surface sites may provide future opportunities for targeted remediation of electronically imperfect interfaces.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2023

Porous Semiconducting K–Sn–Mo–S Aerogel: Synthesis, Local Structure, and Ion-Exchange Properties

Chalcogenide-based aerogels are emerging porous semiconducting nanomaterials that appeal to applications in clean energy and the environment. Here, we report a novel gel, potassium–tin–molybdenum–sulfides (KTMS), that integrates the electrostatically bound K + ions in the covalent network of Sn–Mo–S. Its gelation requires a concurrent reduction of Mo 6+ → Mo 4+/5+ and the oxidation of S 2– → Sn – (n ≈ 1) and Sn 2+ → Sn 4+ . KTMS is an amorphous semiconductor showing quantum confinement effects on band gap energies, 2.1 → 1.4 → 0.9 eV for its wet- → aero- → xerogels. Synchrotron X-ray pair distribution function (PDF) and extended X-ray absorption fine structure (EXAFS) revealed a complex local structure of KTMS consisting of molecular Mo 2 (S 2 ) 6 and Mo 3 S(S 2 ) 6 clusters. In addition, the Sn–S coordination is related to crystalline Na4Sn3S8 and SnS2. KTMS also demonstrated the removal of the radionuclides of Cs + , Sr 2+ , and UO 2 2+ from ppm to ppb levels with distribution constants (Kd) up to ≥104 mL/g. Notably, despite the lack of atomic periodicity in the amorphous KTMS, the K+ ion is ion-exchangeable with chemically diverse Sr 2+ , Cs + , and UO 2 2+ in aqueous solutions; especially the ion-exchange properties of Sr 2+ and UO 2 2+ ≡(O=U=O) 2+ is not known to any chalcogels known to date. The sequestration of Cs + and Sr 2+ was achieved by the exchange of K + in the amorphous KTMS, and the removal of [O=U 6+ =O] 2+ synergistically involves surface sorption via -S····U 6+ =O 2 2+ covalent interactions and ion-exchange via the hard–soft Lewis acid–base paradigm. Overall, cooperative roles played by the diverse bonding motifs, surface-exposed Lewis basic frameworks, and polarizability of the (poly)sulfides make it an exceptional adsorbent for chemically diverse radioactive species. This finding will guide the design of superior sorbents for chemically distinct metal ion separation.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2017

Impact of Microcrack Generation and Surface Degradation on a Nickel-Rich Layered Li[Ni 0.9 Co 0.05 Mn 0.05 ]O 2 Cathode for Lithium-Ion Batteries

In this work, to address the growing demand for energy density, the Ni-rich layered [Ni 0.90 Co 0.05 Mn 0.05 ]O 2 cathode has been synthesized and its electrochemical performance in lithium-ion cells has been benchmarked against a lower-Ni content Li[Ni 0.6 Co 0.2 Mn 0.2 ]O 2 cathode. Li[Ni 0.90 Co 0.05 Mn 0.05 ]O 2 delivers a high discharge capacity of 227 mA h g -1 compared to a capacity of 189 mA h g -1 for Li[Ni 0.6 Co 0.2 Mn 0.2 ]O 2 when cycled up to a lower cutoff voltage of 4.3 V, making it an appealing candidate for electric vehicles. With an increase in the charge cutoff voltage to 4.5 V, Li[Ni 0.90 Co 0.05 Mn 0.05 ]O 2 displays a capacity of 238 mA h g -1 compared to a capacity of 208 mA h g -1 for Li[Ni 0.6 Co 0.2 Mn 0.2 ]O 2 . Although Li[Ni 0.90 Co 0.05 Mn 0.05 ]O 2 suffers during cycling from the usual rapid capacity fade in a manner similar to that of LiNiO 2 , 87 and 81% of the initial capacity could still be retained after 100 cycles even after cycling to higher cutoff voltages of 4.3 and 4.5 V, respectively. A comparison of Li[Ni 0.90 Co 0.05 Mn 0.05 ]O 2 and Li[Ni 0.6 Co 0.2 Mn 0.2 ]O 2 reveals that the capacity fade of Li[Ni 0.90 Co 0.05 Mn 0.05 ]O 2 originates largely from the anisotropic volume change and subsequent microcrack propagation in the bulk and NiO-like rock salt impurity phase formation on the particle surface, which are exacerbated at 4.5 V. Lastly, future work with appropriate doping and surface modification could improve further the performance of Li[Ni 0.90 Co 0.05 Mn 0.05 ]O 2 .

25 ENERGY STORAGE↗
DOE OSTI2018

Origin of the High Capacity Manganese-Based Oxyfluoride Electrodes for Rechargeable Batteries

In the quest for high energy density rechargeable batteries, conversion-type cathode materials stand out with their appealing multielectron transfer properties. However, they undergo a series of complex phase transitions upon initial cycling as opposed to conventional intercalation-type materials. Within this category, iron-based mixed-anion solid solutions (FeO x F 2-x ) have captured the most attention of the battery community, owing to their high theoretical capacity and moderate cyclability. In the meantime, it was recently demonstrated, via a series of electrochemical cycling experiments, the in situ preparation of manganese-based mixed-anion cathode materials based on decomposition of electrolyte salt LiPF6 in the presence of MnO. To take a step forward, we herein report a routine protocol to prepare 220 mAh g -1 -class composite cathodes. In addition, we provide a comprehensive understanding of the in situ fluorination and locally reversible phase transitions using complementary analytical techniques. The charged phase, with an average Mn oxidation state of ca. +2.8, consists of a highly disordered O-rich cubic-spinel-like core and an F-rich amorphous shell. Upon discharge, lithiation induces further phase transition, forming LiF, MnO, and a lithiated rocksalt-like phase. Furthermore this work, which we also extended to the iron-based system, offers insights into modification of chemical and electronic properties of electrode materials by in situ fluorination.

25 ENERGY STORAGE↗
DOE OSTI2020

Catalytic N 2 -to-NH 3 (or -N 2 H 4 ) Conversion by Well-Defined Molecular Coordination Complexes

Nitrogen fixation, the six-electron/six-proton reduction of N 2 , to give NH 3 , is one of the most challenging and important chemical transformations. Notwithstanding the barriers associated with this reaction, significant progress has been made in developing molecular complexes that reduce N 2 into its bioavailable form, NH 3 . This progress is driven by the dual aims of better understanding biological nitrogenases and improving upon industrial nitrogen fixation. In this review, we highlight both mechanistic understanding of nitrogen fixation that has been developed, as well as advances in yields, efficiencies, and rates that make molecular alternatives to nitrogen fixation increasingly appealing. We begin with a historical discussion of N 2 functionalization chemistry that traverses a timeline of events leading up to the discovery of the first bona fide molecular catalyst system and follow with a comprehensive overview of d-block compounds that have been targeted as catalysts up to and including 2019. Furthermore, we end with a summary of lessons learned from this significant research effort and last offer a discussion of key remaining challenges in the field.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2024

Inverse Consequences of the SnO 2 Protection Layers on Pt/C Catalysts in Proton-Exchange Membrane Fuel Cells

Proton-exchange membrane fuel cells (PEMFCs) are promising energy-conversion systems, offering an appealing blend of high energy efficiency and low environmental impact. However, carbon corrosion of PEMFCs is known to significantly degrade their performance, remaining a critical challenge to overcome. In this study, we applied a Nb-doped SnO 2 (Nb-SnO 2 ) nanoparticle coating on Pt/C catalysts as a protective layer, with the Sn/C ratio in the precursors varying from 0.25:1 to 2.0:1. Contradictory behaviors of the coated Pt/C catalysts were observed at different Sn/C ratios. The Sn/C = 1.0 sample exhibited improved electrochemically active surface area retention after 500 cycles of accelerated stress testing (AST) but with more significant polarization and resistance increase observed in the polarization curves. In addition, agglomeration of Nb-SnO 2 particles was observed at a higher Sn/C ratio in the AST of a membrane electrode assembly, with less shrinkage of the total thickness of the Nb-SnO 2 -coated Pt/C electrode. We speculate that formation of Nb-SnO 2 agglomerates occurs once the protective layer is broken down or the unprotected carbon surface is corroded and that these Nb-SnO 2 agglomerates increase the tortuosity of the electron pathways and significantly increase the cell polarization.

30 DIRECT ENERGY CONVERSION↗
DOE OSTI2021

Assessing Marginal Land Availability Based on Land Use Change Information in the Contiguous United States

Utilization of marginal land for growing dedicated bioenergy crops for second-generation biofuels is appealing to avoid conflicts with food production. This study develops a novel framework to quantify marginal land for the Contiguous United States (CONUS) based on a history of satellite-observed land use change (LUC) over the 2008–2015 period. Frequent LUC between crop and noncrop is assumed to be an indicator of economically marginal land; this land is also likely to have a lower opportunity cost of conversion from food crop to bioenergy crop production. We first present an approach to identify cropland in transition using the time series of Cropland Data Layer (CDL) land cover product and determine the amount of land that can be considered marginal with a high degree of confidence vs with uncertainty across the CONUS. We find that the biophysical characteristics of this land and its productivity and environmental vulnerability vary across the land and lie in between that of permanent cropland and permanent natural vegetation/bare areas; this land also has relatively low intrinsic value and agricultural profit but a high financial burden and economic risk. We find that the total area of marginal land with confidence vs with uncertainty is 10.2 and 58.4 million hectares, respectively, and mainly located along the 100th meridian. Only a portion of this marginal land (1.4–2.2 million hectares with confidence and 14.8–19.4 million hectares with uncertainty) is in the rainfed region and not in crop production and, thus, suitable for producing energy crops without diverting land from food crops in 2016. These estimates are much smaller than the estimates obtained by previous studies, which consider all biophysically low-quality land to be marginal without considering economical marginality. The estimate of marginal land for bioenergy crops obtained in this study is an indicator of the availability of economically marginal land that is suitable for bioenergy crop production; whether this land is actually converted to bioenergy crops will depend on the market conditions. Here, we note the inability to conduct field-level validation of cropland in transition and leave it to future advances in technology to ground-truth land use change and its relationship to economically marginal land.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Porous Organic Cages CC3 and CC2 as Adsorbents for the Separation of Carbon Dioxide from Nitrogen and Hydrogen

The selective capture of carbon dioxide over nitrogen and hydrogen is of great industrial interest in flue gas and hydrogen purification respectively. Microporous adsorbents are highly suitable materials to preferentially adsorb gases. Here, in particular, Porous organic cages (POCs) with tunable hierarchically ordered micropores, high surface area, and thermodynamic affinity for CO 2 make them appealing candidates for these applications. Herein, we demonstrate that two prototypical POCs denoted as CC3, and CC2 with limiting pore aperture of 3.6 Å can selectively separate CO 2 from N 2 , and H 2 . For CC3 adsorption selectivities as high as ~ 8 and ~20 for CO 2 /N 2 and CO 2 /H 2 respectively were observed. For CC2 adsorption selectivities as high as ~ 9 and ~35 for CO 2 /N 2 and CO 2 /H 2 respectively were observed. Interestingly, the adsorption selectivity of the studied gases correlated linearly with polarizability selectivity.

Carbon Dioxide↗
DOE OSTI2018

Evolution of Oxyhalide Crystals under Electron Beam Irradiation: An in Situ Method To Understand the Origin of Structural Instability

The oxyhalides have attracted growing interest because of their excellent photocatalytic performance. However, their structural instability hampers further development toward practical applications, a major challenge of current concerns. It is appealing to figure out the origin of structural instability and guide the design of advanced oxyhalide crystals for efficient photocatalysis. In this study, the decomposition of BiOCl crystals, a typical oxyhalide, is triggered by electron beam irradiation and investigated in situ by transmission electron microscopy. The results indicate that the instability originates from the unique layered structure of BiOCl crystals; the interlayer van der Waals bonds are easily broken under electron beam irradiation via the assistance of hydroxyl groups. This facilitates the formation of O/Cl-deficient BiO 1–x Cl 1–y species, Bi metal nanoparticles, and nanobubbles (gaseous substance) that are confined between the adjacent layers. Surface reconstruction would be an effective way to stabilize the oxyhalide crystals.

36 MATERIALS SCIENCE↗
DOE OSTI2019

Probing the Sorption of Perfluorooctanesulfonate Using Mesoporous Metal–Organic Frameworks from Aqueous Solutions

To reduce increasing concentrations of toxic per- and polyfluoroalkyl substances (PFAS), one approach involves the capture of PFAS from aqueous media using porous materials. The use of highly porous, tunable metal organic framework (MOF) materials is appealing for targeted liquid phase adsorption. In this work, for the first time, we demonstrate the excellent capture potential of perfluorooctane sulfonate (PFOS) using both the chromium and iron analogs of the MIL-101 structure. Experimental characterization of PFOS uptake reveals unique differences in adsorption properties between these two analogs providing key implications for future PFOS sorbent design. Specifically, STEM-EDS and IR spectroscopy show definitive proof of adsorption. Furthermore, XPS analysis shows evidence of a strong interaction between sulfur atoms of the polar head group of PFOS and the metal center of the framework in addition to the fluorinated non-polar tail. Additionally, in-situ 19 F NMR reveals higher PFOS affinity for Cr-MIL-101 versus Fe-MIL-101 based on adsorption kinetics. Surprisingly, at these relatively high PFOS concentrations, activated acetylene black carbon is severely outperformed by both MOFs.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2022

Asynchronous Reciprocal Coupling of Martini 2.2 Coarse-Grained and CHARMM36 All-Atom Simulations in an Automated Multiscale Framework

The appeal of multiscale modeling approaches is predicated on the promise of combinatorial synergy. However, this promise can only be realized when distinct scales are combined with reciprocal consistency. Here, we consider multiscale molecular dynamics (MD) simulations that combine the accuracy and macromolecular flexibility accessible to fixed-charge all-atom (AA) representations with the sampling speed accessible to reductive, coarse-grained (CG) representations. AA-to-CG conversions are relatively straightforward because deterministic routines with unique outcomes are achievable. Conversely, CG-to-AA conversions have many solutions due to a surge in the number of degrees of freedom. While automated tools for biomolecular CG-to-AA transformation exist, we find that one popular option, called Backward, is prone to stochastic failure and the AA models that it does generate frequently have compromised protein structure and incorrect stereochemistry. Although these shortcomings can likely be circumvented by human intervention in isolated instances, automated multiscale coupling requires reliable and robust scale conversion. In this work, we detail an extension to Multiscale Machine-learned Modeling Infrastructure (MuMMI), including an improved CG-to-AA conversion tool called sinceCG. This tool is reliable (~98% weakly correlated repeat success rate), automatable (no unrecoverable hangs), and yields AA models that generally preserve protein secondary structure and maintain correct stereochemistry. We describe how the MuMMI framework identifies CG system configurations of interest, converts them to AA representations, and simulates them at the AA scale while on-the-fly analyses provide feedback to update CG parameters. Application to systems containing the peripheral membrane protein RAS and proximal components of RAF kinase on complex eight-component lipid bilayers with ~1.5 million atoms is discussed in the context of MuMMI.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗