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At least 217 records · Page 12

Amortized simulation-based frequentist inference for tractable and intractable likelihoods

Abstract High-fidelity simulators that connect theoretical models with observations are indispensable tools in many sciences. If the likelihood is known, inference can proceed using standard techniques. However, when the likelihood is intractable or unknown, a simulator makes it possible to infer the parameters of a theoretical model directly from real and simulated observations when coupled with machine learning. We introduce an extension of the recently proposed likelihood-free frequentist inference ( LF2I ) approach that makes it possible to construct confidence sets with the p -value function and to use the same function to check the coverage explicitly at any given parameter point. Like LF2I , this extension yields provably valid confidence sets in parameter inference problems for which a high-fidelity simulator is available. The utility of our algorithm is illustrated by applying it to three pedagogically interesting examples: the first is from cosmology, the second from high-energy physics and astronomy, both with tractable likelihoods, while the third, with an intractable likelihood, is from epidemiology 3 3 Code to reproduce all of our results is available on https://github.com/AliAlkadhim/ALFFI . .

Computer Science↗

Efficacy of the Method of Four Coefficients to Determine Charge-Carrier Scattering

The investigation of the electronic properties of semiconductors from transport measurements (i.e., resistivity, Hall, and Seebeck coefficient measurements) is challenging due to the averaging of charge-carrier dynamics inherent in such measurements. Here, we investigate the incorporation of a fourth measurement of electronic transport, the Nernst coefficient, into the analysis, termed the method of four coefficients. This approach yields the Fermi level, effective mass, scattering exponent, and relaxation time prefactor. We begin with a review of the underlying mathematics and investigate the mapping between the four-dimensional material property and transport coefficient spaces. We then investigate how the traditional single-parabolic band method yields a single, potentially incorrect point on the solution subspace. This uncertainty can be resolved through Nernst coefficient measurements and we map the span of the ensuing subspace. We conclude with an investigation of how sensitive the analysis of transport coefficients is to experimental error for different sample types.

charge carriers↗

Dark Energy Survey Year 3 results: Cosmological constraints from galaxy clustering and weak lensing

We present the first cosmology results from large-scale structure using the full 5000 deg 2 of imaging data from the Dark Energy Survey (DES) Data Release 1. We perform an analysis of large-scale structure combining three two-point correlation functions ( 3 × 2 pt ): (i) cosmic shear using 100 million source galaxies, (ii) galaxy clustering, and (iii) the cross-correlation of source galaxy shear with lens galaxy positions, galaxy–galaxy lensing. To achieve the cosmological precision enabled by these measurements has required updates to nearly every part of the analysis from DES Year 1, including the use of two independent galaxy clustering samples, modeling advances, and several novel improvements in the calibration of gravitational shear and photometric redshift inference. The analysis was performed under strict conditions to mitigate confirmation or observer bias; we describe specific changes made to the lens galaxy sample following unblinding of the results and tests of the robustness of our results to this decision. We model the data within the flat Λ CDM and w CDM cosmological models, marginalizing over 25 nuisance parameters. We find consistent cosmological results between the three two-point correlation functions; their combination yields clustering amplitude S 8 = 0.77 6 - 0.017 + 0.017 and matter density Ω m = 0.33 9 - 0.031 + 0.032 in Λ CDM , mean with 68% confidence limits; S 8 = 0.77 5 - 0.024 + 0.026 , Ω m = 0.35 2 - 0.041 + 0.035 , and dark energy equation-of-state parameter w = - 0.9 8 - 0.20 + 0.32 in w CDM . These constraints correspond to an improvement in signal-to-noise of the DES Year 3 3 × 2 pt data relative to DES Year 1 by a factor of 2.1, about 20% more than expected from the increase in observing area alone. This combination of DES data is consistent with the prediction of the model favored by the Planck 2018 cosmic microwave background (CMB) primary anisotropy data, which is quantified with a probability-to-exceed p = 0.13 –0.48. We find better agreement between DES 3 × 2 pt and Planck than in DES Y1, despite the significantly improved precision of both. When combining DES 3 × 2 pt data with available baryon acoustic oscillation, redshift-space distortion, and type Ia supernovae data, we find p = 0.34 . Combining all of these datasets with Planck CMB lensing yields joint parameter constraints of S 8 = 0.81 2 - 0.008 + 0.008 , Ω m = 0.30 6 - 0.005 + 0.004 , h = 0.68 0 - 0.003 + 0.004 , and ∑ m ν < 0.13 eV (95% C.L.) in Λ CDM ; S 8 = 0.81 2 - 0.008 + 0.008 , Ω m = 0.30 2 - 0.006 + 0.006 , h = 0.68 7 - 0.007 + 0.006 , and w = - 1.03 1 - 0.027 + 0.030 in w CDM .

79 ASTRONOMY AND ASTROPHYSICS↗

SCExAO/MEC and CHARIS Discovery of a Low-mass, 6 au Separation Companion to HIP 109427 Using Stochastic Speckle Discrimination and High-contrast Spectroscopy

We report the direct imaging discovery of a low-mass companion to the nearby accelerating A star, HIP 109427, with the Subaru Coronagraphic Extreme Adaptive Optics (SCExAO) instrument coupled with the Microwave Kinetic Inductance Detector Exoplanet Camera (MEC) and CHARIS integral field spectrograph. CHARIS data reduced with reference star point spread function (PSF) subtraction yield 1.1–2.4 μm spectra. MEC reveals the companion in Y and J band at a comparable signal-to-noise ratio using stochastic speckle discrimination, with no PSF subtraction techniques. Combined with complementary follow-up L {sub p} photometry from Keck/NIRC2, the SCExAO data favors a spectral type, effective temperature, and luminosity of M4–M5.5, 3000–3200 K, and log{sub 10}(L/L{sub ⊙})=−2.28{sub −0.04}{sup +0.04}, respectively. Relative astrometry of HIP 109427 B from SCExAO/CHARIS and Keck/NIRC2, and complementary Gaia–Hipparcos absolute astrometry of the primary favor a semimajor axis of 6.55{sup +3.0} {sub −0.48} au, an eccentricity of 0.54{sub −0.15}{sup +0.28}, an inclination of 66.7{sub −14}{sup +8.5} degrees, and a dynamical mass of 0.280{sub −0.059}{sup +0.18} M {sub ⊙}. This work shows the potential for extreme AO systems to utilize speckle statistics in addition to widely used postprocessing methods to directly image faint companions to nearby stars near the telescope diffraction limit.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Signal Stabilization of Self-Oscillating Systems

The hunt (self-oscillations) of a physical system may often be removed by the introduction of an appropriate stabilizing signal which changed the open loop gain in a nonlinear manner. More generally, the performance of nonlinear systems in many cases may be improved by the introduction of extra signals. The theory of signal stabilization developed here extends the earlier work by Oldenburger and Liu involving an equivalent gain concept. It is shown that with the aid of the Fourier series the designer can determine the periodic signal to be inserted at one point in a loop to yield a desired stabilizing input to a nonlinear element in the loop. The use of sinusoidal and triangular inputs to a limiter are compared. An example where a limiter is the only nonlinearity is employed to illustrate the theory. The approach developed here explains experimental results previously reported by Oldenburger.

SELF-OSCILLATION↗

Modulation-transfer-function analysis for sampled image systems

Sampling generally causes the response of a digital imaging system to be locally shift-variant and not directly amenable to Modulation Transfer Function (MTF) analysis. However, this paper demonstrates that a meaningful system response can be calculated by averaging over an ensemble of point-source system inputs to yield an MTF which accounts for the combined effects of image formation, sampling, and image reconstruction. As an illustration, the MTF of the Landsat MSS system is analyzed to reveal an average effective instantaneous field of view which is significantly larger than the commonly accepted value, particularly in the along-track direction where undersampling contributes markedly to an MTF reduction and resultant increase in image blur.

Park, S. K.↗

Comet Halley neutral gas density profile along the Vega 1 trajectory measured by NGE

Data from the Vega 1 permitted the determination of the total neutral gas density profile along the spacecraft trajectory. Discounting small fluctuations, the field ionization source instrument measured a density profile which varied approximately as the inverse radial distance squared. Data from the electron impact ionization instrument yielded a series of calibration points; e.g., the neutral density at 100,000 km is 10,000/cc. The combined data provide a calibrated total density profile, and imply a neutral production rate of 10 to the 30th power molecules/sec.

Curtis, C. C.↗

Structural isomers of C2N(+) - A selected-ion flow tube study

Reactivities of the structural isomers CCN(+) and CNC(+) were examined in a selected-ion flow tube at 300 + or - 5 K. The less reactive CNC(+) isomer was identified as the product of the reactions of C(+) + HCN and C(+) + C2N2; in these reactions only CNC(+) can be produced because of energy constraints. Rate coefficients and branching ratios are reported for the reactions of each isomer with H2, CH4, NH3, H2O, C2H2, HCN, N2, O2, N2O, and CO2. Ab initio calculations are presented for CCN(+) and CNC(+); a saddle point for the reaction CCN(+) yielding CNC(+) is calculated to be 195 kJ/mol above CNC(+). The results provide evidence that the more reactive CCN(+) isomer is unlikely to be present in measurable densities in interstellar clouds.

Knight, J. S.↗

Comparison of frequency domain and time domain laser velocimeter signal processors

An experimental investigation was conducted in the 14- by 22-foot subsonic tunnel at NASA-Langley Research Center to measure the inflow into a scale model helicopter rotor in forward flight. These inflow measurements were acquired utilizing a two-component laser velocimeter, and the data were processed by a frequency-domain processor (FDP). As a subset of the experiment, a time-domain counter processor was utilized simultaneously with an FDP to make a comparison of the two processors possible. The results indicate that the FDP had a marked improvement in processing capability in conditions of low signal-to-noise ratios and had a reduction in the number of erroneous data points acquired. However, the FDP yielded a lower data rate in comparison to the counter when signal-to-noise ratios were high. Comparison of the data sets shows that the FDP consistantly measures velocities which are 0.7 percent higher than those measured by the counter processor.

Mace, W. D., Jr.↗

Geoid-to-topography ratios on Venus: A global perspective

Recently available spherical harmonic solutions for the geoid and topography of Venus are sufficiently high resolution that they can be used to address questions concerning the relationship between geoid and topography on a regional scale. We have approached this question by mapping the geoid-to-topography ratio (GTR) on a systematic global basis. For a given point on the surface, we consider the geoid and elevation values at all points on a gridded representation of those fields located within a specified distance of the reference point. From the set of paired values, we determine the correlation coefficient and the best-fitting straight line. The latter is the GTR at that position, and the former is a measure of the significance of the derived ratio. This procedure is then repeated for all points on the global grid, yielding maps of the GTR and the correlation coefficient. Unlike previous studies of the GRT on Venus, this apprach permits us to make an objective and systematic search for regions with anomalous GTR's as well as areas that do not demonstrate any strong correlation between geoid and topography. These maps can be updated regularly as new harmonic models of the Venus geoid are produced from new Magellan tracking data. This procedure permits the development of a global perspective on the relationship between GTR and venusian surface tectonics.

Simons, Mark↗

Smart Test Machines

Vern Wedeven, president of Wedeven Associates, developed the WAM4, a computer-aided "smart" test machine for simulating stress on equipment, based on his bearing lubrication expertise gained while working for Lewis Research Center. During his NASA years from the 1970s into the early 1980s, Wedeven initiated an "Interdisciplinary Collaboration in Tribology," an effort that involved NASA, six universities, and several university professors. The NASA-sponsored work provided foundation for Wedeven in 1983 to form his own company. Several versions of the smart test machine, the WAM1, WAM2, and WAM3, have proceeded the current version, WAM4. This computer-controlled device can provide detailed glimpses at gear and bearing points of contact. WAM4 can yield a three-dimensional view of machinery as an operator adds "what-if" thermal and lubrication conditions, contact stress, and surface motion. Along with NASA, a number of firms, including Pratt & Whitney, Caterpillar Tractor, Exxon, and Chevron have approached Wedeven for help on resolving lubrication problems.

Source record↗

Partial purification and characterization of indol-3-ylacetylglucose:myo-inositol indol-3-ylacetyltransferase (indoleacetic acid-inositol synthase)

A procedure is described for the purification of the enzyme indol-3-ylacetylglucose:myo-inositol indol-3-ylacetyltransferase (IAA-myo-inositol synthase). This enzyme catalyzes the transfer of indol-3-ylacetate from 1-0-indol-3-ylacetyl-beta-d-glucose to myo-inositol to form indol-3-ylacetyl-myo-inositol and glucose. A hexokinase or glucose oxidase based assay system is described. The enzyme has been purified approximately 16,000-fold, has an isoelectric point of pH 6.1 and yields three catalytically inactive bands upon acrylamide gel electrophoresis of the native protein. The enzyme shows maximum transferase activity with myo-inositol but shows some transferase activity with scyllo-inositol and myo-inosose-2. No transfer of IAA occurs with myo-inositol-d-galactopyranose, cyclohexanol, mannitol, or glycerol as acyl acceptor. The affinity of the enzyme for 1-0-indol-3-ylacetyl-beta-d-glucose is, Km = 30 micromolar, and for myo-inositol is, Km = 4 millimolar. The enzyme does not catalyze the exchange incorporation of glucose into IAA-glucose indicating the reaction mechanism involves binding of IAA glucose to the enzyme with subsequent hydrolytic cleavage of the acyl moiety by the hydroxyl of myo-inositol to form IAA myo-inositol ester.

NASA Program Space Biology↗

Strategy for Maturing Active Radiation Shielding Concepts

Active shielding strategies for protecting astronauts on exploration missions has long been a dream that proved evasive. Study after study since the early 1970’s has shown that solutions are both mass and power prohibitive. This talk will give an overview of current NASA work aimed at making advancements in the area of active shielding. The basic project premise is that we may have a better chance at success if we: (1) remove the constraint of having to reduce the exposure to zero, and instead focus on how to increase the number of ‘safe’ days in space according to the current NASA risk posture; (2) sub-divide the proton and heavy ion energy spectrum to identify a starting point in energy that may yield a non-negligible reduction in ion flux at power levels achievable with current technology, and; (3) develop methods to use scaling to build, test and mature small-scale shielding structures on the ground as a pathway to identifying technology development investment strategies. A top-level overview of these strategies will be presented during this talk.

Radiation Protection↗

Simulation-Based Height of Burst Map for Asteroid Airburst Damage Prediction

Entry and breakup models predict that airburst in the Earth's atmosphere is likely for asteroids up to approximately 200 meters in diameter. Objects of this size can deposit over 250 megatons of energy into the atmosphere. Fast-running ground damage prediction codes for such events rely heavily upon methods developed from nuclear weapons research to estimate the damage potential for an airburst at altitude. (Collins, 2005; Mathias, 2017; Hills and Goda, 1993). In particular, these tools rely upon the powerful yield scaling laws developed for point-source blasts that are used in conjunction with a Height of Burst (HOB) map to predict ground damage for an airburst of a specific energy at a given altitude. While this approach works extremely well for yields as large as tens of megatons, it becomes less accurate as yields increase to the hundreds of megatons potentially released by larger airburst events. This study revisits the assumptions underlying this approach and shows how atmospheric buoyancy becomes important as yield increases beyond a few megatons. We then use large-scale three-dimensional simulations to construct numerically generated height of burst maps that are appropriate at the higher energy levels associated with the entry of asteroids with diameters of hundreds of meters. These numerically generated HOB maps can then be incorporated into engineering methods for damage prediction, significantly improving their accuracy for asteroids with diameters greater than 80-100 m.

Burst Map↗

Spline-Based Smoothing of Airfoil Curvatures

Constrained fitting for airfoil curvature smoothing (CFACS) is a splinebased method of interpolating airfoil surface coordinates (and, concomitantly, airfoil thicknesses) between specified discrete design points so as to obtain smoothing of surface-curvature profiles in addition to basic smoothing of surfaces. CFACS was developed in recognition of the fact that the performance of a transonic airfoil is directly related to both the curvature profile and the smoothness of the airfoil surface. Older methods of interpolation of airfoil surfaces involve various compromises between smoothing of surfaces and exact fitting of surfaces to specified discrete design points. While some of the older methods take curvature profiles into account, they nevertheless sometimes yield unfavorable results, including curvature oscillations near end points and substantial deviations from desired leading-edge shapes. In CFACS as in most of the older methods, one seeks a compromise between smoothing and exact fitting. Unlike in the older methods, the airfoil surface is modified as little as possible from its original specified form and, instead, is smoothed in such a way that the curvature profile becomes a smooth fit of the curvature profile of the original airfoil specification. CFACS involves a combination of rigorous mathematical modeling and knowledge-based heuristics. Rigorous mathematical formulation provides assurance of removal of undesirable curvature oscillations with minimum modification of the airfoil geometry. Knowledge-based heuristics bridge the gap between theory and designers best practices. In CFACS, one of the measures of the deviation of an airfoil surface from smoothness is the sum of squares of the jumps in the third derivatives of a cubicspline interpolation of the airfoil data. This measure is incorporated into a formulation for minimizing an overall deviation- from-smoothness measure of the airfoil data within a specified fitting error tolerance. CFACS has been extensively tested on a number of supercritical airfoil data sets generated by inverse design and optimization computer programs. All of the smoothing results show that CFACS is able to generate unbiased smooth fits of curvature profiles, trading small modifications of geometry for increasing curvature smoothness by eliminating curvature oscillations and bumps (see figure).

Li, W.↗

Sooting tendencies of terpenes and hydrogenated terpenes as sustainable transportation biofuels

Terpenes are a diverse group of molecules that are synthesized by plants and microorganisms through combining units of isoprene (2-methyl-1,3-butadiene). They typically contain rings and methyl branches, which gives them high energy densities and low freezing points and makes them appealing candidates for sustainable transportation biofuels. Between the original biosynthesis and upgrading options such as hydrogenation, they have a large degree of freedom of structures, e.g., different carbon skeletons, positions of double bonds, and functional groups. Therefore, structure-property data is needed to downselect potential fuel candidates. Here, we measured the sooting tendencies of 17 C10 monoterpenes and 7 of their hydrogenated analogues. The hydrogenated compounds were custom synthesized, so the quantities were too small for conventional smoke point measurements. Thus, the sooting tendencies were quantified with yield sooting index (YSI), which is based on the soot yield in a fuel-doped non-premixed methane flame. Derived smoke points (DSPs) were estimated from a correlation between YSI and smoke point for other hydrocarbons. The YSI of terpenes and their derivatives varies widely from 85.6 to 248.5. The YSI follows the trend: terpenes > dihydroterpenes > tetrahydroterpenes. The DSPs of all the tetrahydroterpenes and some dihydroterpenes are higher than that of a Jet-A fuel sample, suggesting that they offer soot reduction benefits. Further, the YSIs depend strongly on molecular structure; for example, α-pinene and β-pinene have identical carbon skeletons and differ only in the position of one carbon-carbon double bond, but the YSI of α-pinene is 34% higher than that of β-pinene. Detailed decomposition analysis via density functional theory (DFT) suggests that compared with β-pinene, α-pinene requires fewer steps to form the first aromatic ring and the process is more thermodynamically favorable. The YSI difference between the pinenes is mainly affected by the identity of the products from the dominant decomposition pathways.

09 BIOMASS FUELS↗

Predicting ptychography probe positions using single-shot phase retrieval neural network

Ptychography is a powerful imaging technique that is used in a variety of fields, including materials science, biology, and nanotechnology. However, the accuracy of the reconstructed ptychography image is highly dependent on the accuracy of the recorded probe positions which often contain errors. These errors are typically corrected jointly with phase retrieval through numerical optimization approaches. When the error accumulates along the scan path or when the error magnitude is large, these approaches may not converge with satisfactory result. We propose a fundamentally new approach for ptychography probe position prediction for data with large position errors, where a neural network is used to make single-shot phase retrieval on individual diffraction patterns, yielding the object image at each scan point. The pairwise offsets among these images are then found using a robust image registration method, and the results are combined to yield the complete scan path by constructing and solving a linear equation. We show that our method can achieve good position prediction accuracy for data with large and accumulating errors on the order of 10 2 pixels, a magnitude that often makes optimization-based algorithms fail to converge. For ptychography instruments without sophisticated position control equipment such as interferometers, our method is of significant practical potential.

47 OTHER INSTRUMENTATION↗

A data base of crop nutrient use, water use, and carbon dioxide exchange in a 2O square meter growth chamber: I. Wheat as a case study

A data set is given describing the daily nutrient uptake, gas exchange, environmental conditions, and carbon (C), and nutrient partitioning at harvest for the entire canopy and root system of a wheat crop (Triticum aestivum, cv. Yecora Rojo). The data were obtained from a 20 m2 stand of wheat plants grown from planting to maturity in a closed, controlled environment, and include daily nutrient uptake [macronutrients, nitrogen (N), phosphorus (P), potassium (K), calcium (Ca), magnesium (Mg), and sulfur (S); and micronutrients, iron (Fe), boron (B), manganese (Mn), zinc (Zn), copper (Cu), and molybdenum (Mo)], canopy carbon dioxide (CO2) exchange rates, and transpiration. Environmental factors such as relative humidity, air temperature, nutrient solution temperature, pH and electrical conductivity, and photoperiod were controlled in the chamber to specific set points. A detailed description of biomass yield for each of the 64 plant growth trays comprising the 20 m2 of growth area is also provided, and includes dry weights of grain, straw, chaff, and roots, along with the concentration of nutrients in different plant tissues and the percent carbohydrate, fat, and protein. To our knowledge, this information represents one of the most extensive data sets available for a canopy of wheat grown from seed to maturity under controlled environmental and nutritional conditions, and thus may provide useful information for model development and validation. A methods section is included to qualify any assumptions that might be required for the use of the data in plant growth models, along with a daily event calendar indicating when adjustments in set points and occasional equipment or sensor failures occurred.

NASA Discipline Number 61-20↗