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NASA NTRS2020

Harnessing Big Data to Support the Conservation and Rehabilitation of Mangrove Forests Globally

Mangrove forests are found on sheltered coastlines in tropical, subtropical, and some warm temperate regions. These forests support unique biodiversity and provide a range of benefits to coastal communities, but as a result of large-scale conversion for aquaculture, agriculture, and urbanization, mangroves are considered increasingly threatened ecosystems. Scientific advances have led to accurate and comprehensive global datasets on mangrove extent, structure, and condition, and these can support evaluation of ecosystem services and stimulate greater conservation and rehabilitation efforts. To increase the utility and uptake of these products, in this Perspective we provide an overview of these recent and forthcoming global datasets and explore the challenges of translating these new analyses into policy action and on-the-ground conservation. We describe a new platform for visualizing and disseminating these datasets to the global science community, non-governmental organizations, government officials, and rehabilitation practitioners and highlight future directions and collaborations to increase the uptake and impact of large-scale mangrove research.

mangrove↗

DOE OSTI2023

Climate change–induced stress disrupts ectomycorrhizal interaction networks at the boreal–temperate ecotone

The interaction networks formed by ectomycorrhizal fungi (EMF) and their tree hosts, which are important to both forest recruitment and ecosystem carbon and nutrient retention, may be particularly susceptible to climate change at the boreal–temperate forest ecotone where environmental conditions are changing rapidly. Here, we quantified the compositional and functional trait responses of EMF communities and their interaction networks with two boreal ( Pinus banksiana and Betula papyrifera ) and two temperate ( Pinus strobus and Quercus macrocarpa ) hosts to a factorial combination of experimentally elevated temperatures and reduced rainfall in a long-term open-air field experiment. The study was conducted at the B4WarmED (Boreal Forest Warming at an Ecotone in Danger) experiment in Minnesota, USA, where infrared lamps and buried heating cables elevate temperatures (ambient, +3.1 °C) and rain-out shelters reduce growing season precipitation (ambient, ~30% reduction). EMF communities were characterized and interaction networks inferred from metabarcoding of fungal-colonized root tips. Warming and rainfall reduction significantly altered EMF community composition, leading to an increase in the relative abundance of EMF with contact-short distance exploration types. These compositional changes, which likely limited the capacity for mycelial connections between trees, corresponded with shifts from highly redundant EMF interaction networks under ambient conditions to less redundant (more specialized) networks. Further, the observed changes in EMF communities and interaction networks were correlated with changes in soil moisture and host photosynthesis. Collectively, these results indicate that the projected changes in climate will likely lead to significant shifts in the traits, structure, and integrity of EMF communities as well as their interaction networks in forest ecosystems at the boreal–temperate ecotone.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS1979

The ecological variations in thermal infrared emissivity of vegetation

The author has identified the following significant results. Through a series of contrasts, the statistical significance of differences in emissivity was determined for vegegation in dry and humid deserts, montane and deciduous rain forests, and the temperate region. No significant differences were found between the two types of desert vegetation or among the types of nondesert vegetation. However, the rain forest vegetation was significantly different from that of the temperate region. On a community-wide level, there is some physiological adaptation in plants to their radiational environment.

Arp, G. K.↗

DOE OSTI2023

Metatranscriptomics sheds light on the links between the functional traits of fungal guilds and ecological processes in forest soil ecosystems

Soil fungi belonging to different functional guilds, such as saprotrophs, pathogens, and mycorrhizal symbionts, play key roles in forest ecosystems. To date, no study has compared the actual gene expression of these guilds in different forest soils. We used metatranscriptomics to study the competition for organic resources by these fungal groups in boreal, temperate, and Mediterranean forest soils. Using a dedicated mRNA annotation pipeline combined with the JGI MycoCosm database, we compared the transcripts of these three fungal guilds, targeting enzymes involved in C- and N mobilization from plant and microbial cell walls. Genes encoding enzymes involved in the degradation of plant cell walls were expressed at a higher level in saprotrophic fungi than in ectomycorrhizal and pathogenic fungi. However, ectomycorrhizal and saprotrophic fungi showed similarly high expression levels of genes encoding enzymes involved in fungal cell wall degradation. Transcripts for N-related transporters were more highly expressed in ectomycorrhizal fungi than in other groups. Here, we showed that ectomycorrhizal and saprotrophic fungi compete for N in soil organic matter, suggesting that their interactions could decelerate C cycling. Metatranscriptomics provides a unique tool to test controversial ecological hypotheses and to better understand the underlying ecological processes involved in soil functioning and carbon stabilization.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2021

The Transcriptional Response of Soil Bacteria to Long-Term Warming and Short-Term Seasonal Fluctuations in a Terrestrial Forest

Terrestrial ecosystems are an important carbon store, and this carbon is vulnerable to microbial degradation with climate warming. After 30 years of experimental warming, carbon stocks in a temperate mixed deciduous forest were observed to be reduced by 30% in the heated plots relative to the controls. In addition, soil respiration was seasonal, as was the warming treatment effect. We therefore hypothesized that long-term warming will have higher expressions of genes related to carbohydrate and lipid metabolism due to increased utilization of recalcitrant carbon pools compared to controls. Because of the seasonal effect of soil respiration and the warming treatment, we further hypothesized that these patterns will be seasonal. We used RNA sequencing to show how the microbial community responds to long-term warming (~30 years) in Harvard Forest, MA. Total RNA was extracted from mineral and organic soil types from two treatment plots (+5°C heated and ambient control), at two time points (June and October) and sequenced using Illumina NextSeq technology. Treatment had a larger effect size on KEGG annotated transcripts than on CAZymes, while soil types more strongly affected CAZymes than KEGG annotated transcripts, though effect sizes overall were small. Although, warming showed a small effect on overall CAZymes expression, several carbohydrate-associated enzymes showed increased expression in heated soils (~68% of all differentially expressed transcripts). Further, exploratory analysis using an unconstrained method showed increased abundances of enzymes related to polysaccharide and lipid metabolism and decomposition in heated soils. Compared to long-term warming, we detected a relatively small effect of seasonal variation on community gene expression. Together, these results indicate that the higher carbohydrate degrading potential of bacteria in heated plots can possibly accelerate a self-reinforcing carbon cycle-temperature feedback in a warming climate.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2024

Overlooked branch turnover creates a widespread bias in forest carbon accounting

Most measurements and models of forest carbon cycling neglect the carbon flux associated with the turnover of branch biomass, a physiological process quantified for other organs (fine roots, leaves, and stems). Synthesizing data from boreal, temperate, and tropical forests (184,815 trees), we found that including branch turnover increased empirical estimates of aboveground wood production by 16% (equivalent to 1.9 Pg Cy −1 globally), of similar magnitude to the observed global forest carbon sinks. In addition, reallocating carbon to branch turnover in model simulations reduced stem wood biomass, a long-lasting carbon storage, by 7 to 17%. This prevailing neglect of branch turnover suggests widespread biases in carbon flux estimates across global datasets and model simulations. Branch litterfall, sometimes used as a proxy for branch turnover, ignores carbon lost from attached dead branches, underestimating branch C turnover by 38% in a pine forest. Modifications to field measurement protocols and existing models are needed to allow a more realistic partitioning of wood production and forest carbon storage.

Lim, Hyungwoo↗

NASA NTRS1984

Habitability of the Earth

Test methods to measure land vegetation biomass, net biological production and leaf area index by remote sensing are applied to estimate the biomass and net biological productivity of selected biomes, including the boreal forests and north temperate grasslands. Field verification is conducted in conjunction with remote sensing of pertinent variables and the development of a data base of relevant material initiated. Measurements are made in the Superior National Forest, Minnesota with the following remote sensing instruments: (1) an airborne 8 band Barnes radiometer; (2) the thematic mapper simulator flown in a NASA C-130 aircraft; (3) MSS data from LANDSAT 3; and (4) AVHRR data from the NOAA Satellite. Vegetation data collected as field verification in the Superior National Forest is summarized.

Botkin, D. B.↗

DOE OSTI2020

Short- and long-term responses of photosynthetic capacity to temperature in four boreal tree species in a free-air warming and rainfall manipulation experiment

Abstract High latitude forests cope with considerable variation in moisture and temperature at multiple temporal scales. To assess how their photosynthetic physiology responds to short- and long-term temperature variation, we measured photosynthetic capacity for four tree species growing in an open-air experiment in the boreal-temperate ecotone `Boreal Forest Warming at an Ecotone in Danger' (B4WarmED). The experiment factorially manipulated temperature above- and below-ground (ambient, +3.2 °C) and summer rainfall (ambient, 40% removal). We measured A/Ci curves at 18, 25 and 32 °C for individuals of two boreal (Pinus banksiana Lamb., Betula papyrifera Marsh.) and two temperate species (Pinus strobus L., Acer rubrum L.) experiencing the long-term warming and/or reduced-rainfall conditions induced by our experimental treatments. We calculated the apparent photosynthetic capacity descriptors VCmax,Ci and Jmax,Ci and their ratio for each measurement temperate. We hypothesized that (i) VCmax,Ci and Jmax,Ci would be down-regulated in plants experiencing longer term (e.g., weeks to months) warming and reduced rainfall (i.e., have lower values at a given measurement temperature), as is sometimes found in the literature, and that (ii) plants growing at warmer temperatures or from warmer ranges would show greater sensitivity (steeper slope) to short-term (minutes to hours) temperature variation. Neither hypothesis was supported as a general trend across the four species, as there was not a significant main effect (across species) of either warming or rainfall reduction on VCmax,Ci and Jmax,Ci. All species markedly increased VCmax,Ci and Jmax,Ci (and decreased their ratio) with short-term increases in temperature (i.e., contrasting values at 18, 25 and 32 °C), and those responses were independent of long-term treatments and did not differ among species. The Jmax,Ci:VCmax,Ci ratio was, however, significantly lower across species in warmed and reduced rainfall treatments. Collectively, these results suggest that boreal trees possess considerable short-term plasticity that may allow homeostasis of VCmax,Ci and Jmax,Ci to a longer term temperature treatment. Our results also caution against extrapolating results obtained under controlled and markedly contrasting temperature treatments to responses of photosynthetic parameters to more modest temperature changes expected in the near-term with climate warming in field conditions.

Forestry↗

NASA NTRS2018

Hydraulic Diversity of Forests Regulates Ecosystem Resilience During Drought

Plants influence the atmosphere through fluxes of carbon, water and energy, and can intensify drought through land–atmosphere feedback effects. The diversity of plant functional traits in forests, especially physiological traits related to water (hydraulic) transport, may have a critical role in land–atmosphere feedback, particularly during drought. Here we combine 352 site-years of eddy covariance measurements from 40 forest sites, remote-sensing observations of plant water content and plant functional-trait data to test whether the diversity in plant traits affects the response of the ecosystem to drought. We find evidence that higher hydraulic diversity buffers variation in ecosystem flux during dry periods across temperate and boreal forests. Hydraulic traits were the predominant significant predictors of cross-site patterns in drought response. By contrast, standard leaf and wood traits, such as specific leaf area and wood density, had little explanatory power. Our results demonstrate that diversity in the hydraulic traits of trees mediates ecosystem resilience to drought and is likely to have an important role in future ecosystem–atmosphere feedback effects in a changing climate.

Climate and Earth system modelling↗

NASA NTRS2013

Forest Structure Characterization Using JPL's UAVSAR Multi-Baseline Polarimetric SAR Interferometry and Tomography

This paper concerns forest remote sensing using JPL's multi-baseline polarimetric interferometric UAVSAR data. It presents exemplary results and analyzes the possibilities and limitations of using SAR Tomography and Polarimetric SAR Interferometry (PolInSAR) techniques for the estimation of forest structure. Performance and error indicators for the applicability and reliability of the used multi-baseline (MB) multi-temporal (MT) PolInSAR random volume over ground (RVoG) model are discussed. Experimental results are presented based on JPL's L-band repeat-pass polarimetric interferometric UAVSAR data over temperate and tropical forest biomes in the Harvard Forest, Massachusetts, and in the La Amistad Park, Panama and Costa Rica. The results are partially compared with ground field measurements and with air-borne LVIS lidar data.

UAVSAR (Uninhabited Aerial Vehicle SAR)↗

NASA NTRS2013

Forest Structure Characterization Using Jpl's UAVSAR Multi-Baseline Polarimetric SAR Interferometry and Tomography

remote sensing↗

DOE OSTI2026

Dataset for Cruz-O'Byrne et al (2026): "Divergent biogeochemical responses in upland coastal forest soils to repeated flooding and shifts in water chemistry"

Hydrologic disturbances from accelerated sea-level rise and the increasing frequency and intensity of storms and tidal flooding are altering biogeochemical processes in upland coastal forests, transforming these ecosystems into wetlands. However, the initial effects of flooding on belowground biogeochemistry and the mechanisms driving greenhouse gas dynamics and soil organic matter stability during the early stages of this transition remain poorly understood. This dataset presents the results of a mesocosm experiment conducted in a controlled, highly instrumented laboratory environment, in which freshwater and brackish water pulses were applied to intact soil monoliths from a temperate upland coastal forest to examine how floodwater chemistry influences soil biogeochemistry and organo-mineral interactions. All data files are plain-text CSV (comma-separated value), and no special software is required to read them. Details about the content of each file are available in the document “Dataset_readme”. The dataset consists of the following data: • rcruzobyrne_moisture: Soil volumetric water content (VWC) • rcruzobyrne_GHG: Headspace greenhouse gas (GHG) concentration and fluxes • rcruzobyrne_methane_isotopes: Headspace methane isotope signature • rcruzobyrne_porewater: Porewater chemistry • rcruzobyrne_CDOM: Porewater colored dissolved organic matter (CDOM) • rcruzobyrne_FTIR: Soil Fourier-transform infrared (FTIR) spectroscopy Details of the experimental setup, data collection, and data analysis are provided in the manuscript by Cruz-O’Byrne et al (2026) Divergent biogeochemical responses in upland coastal forest soils to repeated flooding and shifts in water chemistry. Biogeochemistry. https://doi.org/10.1007/s10533-026-01340-0

EARTH SCIENCE > ATMOSPHERE > GREENHOUSE GAS↗

NASA NTRS2016

Lidar-Based Estimates of Above-Ground Biomass in the Continental US and Mexico Using Ground, Airborne, and Satellite Observations

Existing national forest inventory plots, an airborne lidar scanning (ALS) system, and a space profiling lidar system (ICESat-GLAS) are used to generate circa 2005 estimates of total aboveground dry biomass (AGB) in forest strata, by state, in the continental United States (CONUS) and Mexico. The airborne lidar is used to link ground observations of AGB to space lidar measurements. Two sets of models are generated, the first relating ground estimates of AGB to airborne laser scanning (ALS) measurements and the second set relating ALS estimates of AGB (generated using the first model set) to GLAS measurements. GLAS then, is used as a sampling tool within a hybrid estimation framework to generate stratum-, state-, and national-level AGB estimates. A two-phase variance estimator is employed to quantify GLAS sampling variability and, additively, ALS-GLAS model variability in this current, three-phase (ground-ALS-space lidar) study. The model variance component characterizes the variability of the regression coefficients used to predict ALS-based estimates of biomass as a function of GLAS measurements. Three different types of predictive models are considered in CONUS to determine which produced biomass totals closest to ground-based national forest inventory estimates - (1) linear (LIN), (2) linear-no-intercept (LNI), and (3) log-linear. For CONUS at the national level, the GLAS LNI model estimate (23.95 +/- 0.45 Gt AGB), agreed most closely with the US national forest inventory ground estimate, 24.17 +/- 0.06 Gt, i.e., within 1%. The national biomass total based on linear ground-ALS and ALS-GLAS models (25.87 +/- 0.49 Gt) overestimated the national ground-based estimate by 7.5%. The comparable log-linear model result (63.29 +/-1.36 Gt) overestimated ground results by 261%. All three national biomass GLAS estimates, LIN, LNI, and log-linear, are based on 241,718 pulses collected on 230 orbits. The US national forest inventory (ground) estimates are based on 119,414 ground plots. At the US state level, the average absolute value of the deviation of LNI GLAS estimates from the comparable ground estimate of total biomass was 18.8% (range: Oregon,−40.8% to North Dakota, 128.6%). Log-linear models produced gross overestimates in the continental US, i.e., N2.6x, and the use of this model to predict regional biomass using GLAS data in temperate, western hemisphere forests is not appropriate. The best model form, LNI, is used to produce biomass estimates in Mexico. The average biomass density in Mexican forests is 53.10 +/- 0.88 t/ha, and the total biomass for the country, given a total forest area of 688,096 sq km, is 3.65 +/- 0.06 Gt. In Mexico, our GLAS biomass total underestimated a 2005 FAO estimate (4.152 Gt) by 12% and overestimated a 2007/8 radar study's figure (3.06 Gt) by 19%.

Hybrid 3-Phase sampling↗

NASA NTRSDate not supplied

Climate change reshapes the drivers of false spring risk across European trees

Temperate and boreal forests are shaped by late spring freezing events after budburst, which are also known as false springs. Research has generated conflicting results on whether or not these events will change with climate change, potentially because---to date---no study has compared the myriad climatic and geographic factors that contribute to a plant's risk of a false spring. We assessed and compared the strength of the effects of mean spring temperature, distance from the coast, elevation and the North Atlantic Oscillation (NAO) using PEP725 leafout data for six temperate, decidious tree species across 11,648 sites in Central Europe and how these predictors shifted with climate change. Across species before recent warming, mean spring temperature and distance from the coast were the strongest predictors, with higher mean spring temperatures associated with decreased risk in false springs (–7.64% per 2°C increase) and sites further from the coast experiencing an increased risk (5.32% per 150km from the coast). Elevation (2.23% per 200m increase in elevation) and NAO index (1.91% per 0.3 increase) also increased false spring risk. With climate change, elevation and distance from coast---i.e., the geographic factors---remain relatively stable, while climatic factors shifted in magnitude for mean spring temperature (down to -2.84% in risk per 2°C), and in direction, with positive NAO phases leading to lower risk (-9.15% per 0.3). The residual effects of climate change---unexplained by the climatic and geographic factors already included in the model---magnified the species-level variation in risk, with risk increasing among early-leafout species (i.e., Aesculus hippocastanum, Alnus glutinosa and Betula pendula) but a decline or no change in risk among late-leafout species (i.e., Fagus sylvatica, Fraxinus excelsior and Quercus robur). Our results show that climate change has reshaped the major drivers of false spring risk and highlight how considering multiple factors can yield a better understanding of the complexities of climate change.

Climate change↗

NASA NTRS2011

Exploring the Influence of Impervious Surface Density and Shape on Urban Heat Islands in the Northeast USA Using MODIS and Landsat

Impervious surface area (ISA) from the National Land Cover Database (NLCD) 2001 and land surface temperature (LST) from MODIS averaged over three annual cycles (2003-2005) are used in a spatial analysis to assess the urban heat island (UHI) signature and its relationship to settlement size and shape, development intensity distribution, and land cover composition for 42 urban settlements embedded in forest biomes in the Northeastern United States. Development intensity zones, based on percent ISA, are defined for each urban area emanating outward from the urban core to nearby rural areas and are used to stratify land surface temperature. The stratification is further constrained by biome type and elevation to insure objective intercomparisons between urban zones within an urban settlement and between settlements. Stratification based on ISA allows the definition of hierarchically ordered urban zones that are consistent across urban settlements and scales. In addition to the surrounding ecological context, we find that the settlement size and shape as well as the development intensity distribution significantly influence the amplitude of summer daytime UHI. Within the Northeastern US temperate broadleaf mixed forest, UHI magnitude is positively related to the logarithm of the urban area size. Our study indicates that for similar urban area sizes, the development intensity distribution is one of the major drivers of UHI. In addition to urban area size and development intensity distribution, this analysis shows that both the shape of the urban area and the land cover composition in the surrounding rural area play an important role in modulating the UHI magnitude in different urban settlements. Our results indicate that remotely sensed urban area size and shape as well as the development intensity distribution influence UHI amplitude across regional scales.

Zhang, Ping↗

NASA NTRSDate not supplied

Can We Model Forest Demography Globally? Benchmarking of State-of-the-Art Demographic DGVMs

Forests in Dynamic Global Vegetation Models (DGVMs) have historically been simulated as area-averaged plant functional types in each gridcell instead of representing communities of trees of different sizes and ages (demography). Just as the behaviour of a tree differs according to its ontogeny, so the behaviour of forests is known to differ depending on their demography. Accurately simulating demography is therefore key in order to address questions on afforestation and management strategies, as well as assessments of resilience of forests to disturbances such as drought and fire or diversity changes after a disturbance. Ultimately, demography determines the overall forest biomass in natural forests and is a key arbiter of growth and mortality rates. DGVMs are now able to simulate size and age structure of the trees in forests. However, these models have so far not been benchmarked alongside each other. We evaluate 6 DGVMs (BiomeE, CABLE-POP, FATES, LPJ-GUESS, JULES-RED, ORCHIDEE) against observations on regrowth dynamics as well as natural forests at boreal, temperate and tropical sites. We examine whether the models capture observed regrowth dynamics after disturbance, well-known stand size structure and well-established processes such as self-thinning. We outline the planned route forward towards a standardised international benchmarking framework for demographic DGVMs.

Dynamic Global Vegetation Models↗

DOE OSTI2021

Intensified Soil Moisture Extremes Decrease Soil Organic Carbon Decomposition: A Mechanistic Modeling Analysis

Earth system models have predicted that there will be more frequent and severe precipitation and drought events in terrestrial ecosystems. Microbially mediated decomposition of soil organic carbon (SOC) tends to increase as soils wet and decrease as soils dry. However, the long-term SOC change under intensified moisture extremes remains poorly known as it depends on the frequency and intensity of soil drying and wetting. In this study, we explored long-term SOC dynamics under scenarios of alternating drying-wetting cycles using the Microbial-ENzyme Decomposition model, a mechanistic microbial model. The model was parameterized with 11 years of observations from a temperate deciduous broadleaf forest site, showing satisfactory model performance in both model calibration (R 2 = 0.67) and validation (R 2 = 0.69) against heterotrophic respiration. We then used the model to simulate the long-term SOC dynamics under five scenarios of alternating drying-wetting cycles with different frequencies and severities over a period of 100 years. Results showed that the changes in active microbial biomass C and the corresponding turnover rates of SOC pools were more sensitive to soil drying than soil wetting. As a result, the cumulative soil carbon emission from microbial respiration decreased by 433.7 g C m -2 after the 100-year simulation in the highest frequency and intensity moisture scenario, but was not significantly affected by the lowest frequency and intensity scenario. This study emphasizes the nonlinear response of SOC decomposition to soil moisture changes, which causes decreased decomposition by microbes under drying that is, not compensated by increased decomposition under wetting conditions.

58 GEOSCIENCES↗

DOE OSTI2023

Responses of soil organic carbon to climate extremes under warming across global biomes

The impact of more extreme climate conditions under global warming on soil organic carbon (SOC) dynamics remains unquantified. Here, in this study, we estimate the response of SOC to climate extreme shifts under 1.5 °C warming by combining a space-for-time substitution approach and global SOC measurements (0–30 cm soil). Most extremes (22 out of 33 assessed extreme types) exacerbate SOC loss under warming globally, but their effects vary among ecosystems. Only decreasing duration of cold spells exerts consistent positive effects, and increasing extreme wet days exerts negative effects in all ecosystems. Temperate grasslands and croplands negatively respond to most extremes, while positive responses are dominant in temperate and boreal forests and deserts. In tundra, 21 extremes show neutral effects, but 11 extremes show negative effects with stronger magnitude than in other ecosystems. Our results reveal distinct, biome-specific effects of climate extremes on SOC dynamics, promoting more reliable SOC projection under climate change.

54 ENVIRONMENTAL SCIENCES↗