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At least 217 records · Page 12

Sentinel

Network intrusion detection systems (NIDS) are commonplace in network security but they frequently employ algorithms that are computational demanding requiring hardware and software with significant power requirements. Two examples of such resource-intensive algorithms used for network security are regular expression matching and broader signature pattern matching which are commonly used in deep packet inspection (DPI). Network security algorithms that have large power requirements may be a challenge for low-power internet-of-things (IoT) environments, which generally lack the power resources to implement complex security measures like computationally expensive DPI at the edge. Furthermore, IoT environments incorporating 5G standalone networks have network latency constraints beyond just power that make DPI at the edge even more difficult. Programmable logic is ideally suited for machine learning inference for DPI because of its deep instruction level parallelism and single-cycle memory access. Machine learning approaches for DPI have been explored before using the programmable logic of field programmable gate arrays (FPGA) as a potential solution for NIDS approaches that would be power-suitable for IoT. However, those previous programmable logic NIDS approaches utilize either a supervised or unsupervised learning model. Sentinel utilizes the ensemble of these two machine learning approaches known as a semi-supervised approach which has shown promise in NIDS implementations. Sentinel provides a programmable logic implementation of a semi-supervised approach for DPI which operates at much lower power and latency than a GPU implementation with negligible loss of accuracy due to quantization through a logistic regressor.

Anderson, MatthewW [Idaho National Laboratory (INL↗

sparkctl [SWR-25-109]

This package implements configuration and orchestration of Spark clusters with standalone cluster managers. This is useful in environments like HPCs where the infrastructure implemented by cloud providers, such as AWS, is not available. It is particularly helpful when users want to deploy Spark but do not have administrative control of the servers.

Thom, Daniel [National Renewable Energy Laboratory↗

Dirty Word Scanner

SAND2025-09142O Dirty Word Scanner helps prevent the accidental inclusion of sensitive terms by scaning files in repositories to catch "dirty words" before they are committed. While there are existing solutions focused on passwords and API keys, this tool offers additional features tailored to specific security needs. It will function as a standalone tool, incorporating advanced capabilities from similar tools to provide a comprehensive solution. This tool can unpack HDF5 files and examine their contents. It can display image, audio, and visual files to the user and request a manual determination of whether they are safe. It can also detect arbitrary binary files and ask the user to verify that they're safe. The tool enables sophisticated whitelisting of strings and regular expressions for cases where a term is sensitive in certain contexts but not in others. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.

Gates, Jason [Sandia National Lab. (SNL-CA), Liver↗

RxnRover/amlro

AMLRO (Active Machine Learning Reaction Optimizer) is an open-source framework designed to accelerate chemical reaction optimization using active learning with classical machine learning regression models. AMLRO integrates space-filling sampling strategies (e.g., Sobol and Latin Hypercube sampling) with iterative model training, prediction, and experiment selection to efficiently navigate complex reaction spaces. The platform supports multiple regression models, flexible multi-objective definitions, and user-defined parameter bounds, enabling data-efficient optimization from small initial datasets. AMLRO is designed for ease of use by experimentalists and can operate as a standalone decision-support tool or be integrated into closed-loop automated experimentation workflows.

Kulathunga, Dulitha Prasanna [Iowa State Universit↗

rtems-init

A standalone init system for RTEMS 7 that provides a framework for the configuration and booting of EPICS IOCs.

Lorelli, Jeremy [SLAC National Accelerator Laborat↗

NLR VISSIM Wrapper [SWR-26-023]

Software that allows the execution of VISSIM simulations based on any airport access/egress mode share scenario. This is a standalone executable that takes the baseline VISSIM model provided by Seattle Tacoma International Airport (SEA) and a synthetic passenger dataset as inputs and generates travel time changes based on the congestion evaluation function built into the software.

Ge, Yanbo [National Laboratory of the Rockies (NLR↗

FAD-Toolset (Floating Array Design Toolset) [SWR-26-056]

The Floating Array Design (FAD) Toolset is a collection of tools for modeling and designing arrays of floating offshore structures. It was originally designed for floating wind systems but has applicability for many offshore applications. A core part of the FAD Toolset is the floating array model, which serves as a high-level library for efficiently modeling a floating array, such as a floating wind array. It combines site condition information and a description of the floating array design, and contains functions for evaluating the array's behavior considering the site conditions. For example, it combines information about site soil conditions, mooring line loads, and an array's anchor characteristics to estimate the holding capacity of each anchor. The library works in conjunction with the tools RAFT, MoorPy, and FLORIS to model floating platforms, wind turbines, mooring systems, power cables, and array wakes respectively. Layered on top of the floating array model is a set of design tools that can be used for algorithmically adjusting or optimizing parts of the a floating array. Specific tools existing for mooring lines, shared mooring systems, dynamic power cables, static power cable routing, and overall array layout. These capabilities work with the design representation and evaluation functions in the floating array model, and they can be applied by users in various combinations to suit different purposes. In addition to standalone uses of the FAD Toolset, a coupling has been made with Ard, (https://github.com/NLRWindSystems/Ard) a sophisticated and flexible wind farm optimization tool. This coupling allows Ard to use certain mooring system capabilities from FAD to perform layout optimization of floating wind farms with Ard's more advanced layout optimization capabilities. The FAD Toolset works with the IEA Wind Task 49 Ontology (https://github.com/IEAWindTask49/Ontology), which provides a standardized format for describing floating wind farm sites and designs. See example use cases in our examples folder (https://github.com/NLRWindSystems/FAD-Toolset/blob/main/examples/README.md) For working with the library, it is important to understand the floating array model structure, which is described more here: https://github.com/NLRWindSystems/FAD-Toolset/blob/main/fad/README.md.

Sirkis, Leah [National Laboratory of the Rockies (↗

OpenStudio®-MCP [SWR-26-035]

OpenStudio®-MCP is a Model Context Protocol (MCP) server that lets AI assistants perform building energy modeling through natural language. Rather than requiring users to learn the OpenStudio® SDK, EnergyPlus® scripting, or Ruby/Python automation, the server translates conversational requests into sequences of tool calls that create models, design HVAC systems, run simulations, and extract results — all within a single chat session. The server's 124 tools are organized into a skills architecture where each skill encapsulates a domain of building energy modeling (envelope, HVAC, loads, weather, simulation, results) behind typed, LLM-friendly interfaces. High-leverage operations like applying ASHRAE 90.1 baseline systems or generating standards-compliant typical buildings are exposed as single tool calls that internally wire dozens of OpenStudio® objects. Bundled measures from ComStock™ and Openstudio® -common-measures-gem are wrapped with dedicated tools and typed arguments rather than exposed through a generic measure interface, so AI models get consistent, error-resistant recipes without needing to discover measure arguments at runtime. A key design decision is structured results extraction: six SQL-based tools return surgical ~300–1,000 token responses (end-use breakdowns, envelope summaries, HVAC sizing, timeseries data) instead of requiring the AI to parse ~100K-token raw HTML reports, making iterative design exploration practical within context window limits. The codebase is designed as a reference implementation — explicit, well-commented, and modular — so that other simulation engines (EnergyPlus® standalone, TRNSYS, DOE-2) can use it as a template for building their own MCP servers.

Ball, Brian [National Laboratory of the Rockies (N↗

DieselGen.jl

SAND2026-22947O DieselGen.jl is a Julia tool for diesel-engine generator sizing and performance simulation. It provides a standalone implementation of FASTSim-style diesel fuel-converter behavior with differentiable efficiency and fuel-consumption calculations. Sandia National Laboratories is a multimission laboratory managed and operated by National Technology & Engineering Solutions of Sandia, LLC, a wholly owned subsidiary of Honeywell International Inc., for the U.S. Department of Energy’s National Nuclear Security Administration under contract DE-NA0003525.

Michelen Strofer, Carlos [Sandia National Lab. (SN↗

V-HAMSTeR v1.0.0

V-HAMSTeR is a bioinformatics software tool designed to predict the hosts of viruses directly from genomic sequences. It can be used by researchers to predict animal, prokaryotic, plant, protist or fungal viral hosts including viruses that may be fragmented or discovered in environmental metagenomic datasets. Features & Uses: The software employs a novel dual-stream deep learning architecture that dynamically fuses implicit sequence embeddings from a genomic foundation model with 13 explicit, handcrafted biological features (e.g., coding density and strand switch rates). To ensure maximum reliability, V=HAMSTeR deploys a 5-fold deep ensemble calibrated via Joint Temperature Scaling, providing users with statistically rigorous confidence probabilities. It also features an automated sequence chunking and mean-pooling module to seamlessly process variable-length contigs. Advantages Over Similar Technologies: Existing tools (e.g., IPEV, RNAVirHost) typically rely on either basic k-mers or isolated neural networks. V-HAMSTeR's hybrid architecture captures both broad genomic context and specific biological motifs that standalone foundation models often miss. Furthermore, unlike competitor tools that struggle with incomplete data or exhibit extreme overconfidence, V-HAMSTeR is explicitly benchmarked and mathematically calibrated for fragmented assemblies (1kb–10kb). This makes it uniquely robust, accurate, and trustworthy for the messy reality of real-world environmental viromics.

Grigson, Susie [Lawrence Berkeley National Laborat↗

redis-pvxs-ioc

redis-pvxs-ioc is a standalone PVAccess service for hot-reloadable, Redis-backed EPICS process variables (PV) defined by YAML. The core runtime is PVA-only. It does not load EPICS databases, call iocInit(), or serve Channel Access.

Steinkamp, Derek [Fermi National Accelerator Labor↗

Evaluation of coupled wind-wave model simulations of offshore winds in the Mid-Atlantic Bight using lidar-equipped buoys.

From 2014 to 2017, two Department of Energy buoys equipped with Doppler lidar were deployed off the U.S. East Coast to provide long term measurements of hub-height wind speed in the marine environment. In this study, we performed simulations of selected cases from the deployment using a 5-km configuration of the Weather Research and Forecasting (WRF) model, to see if simulated hub height speeds could produce closer agreement with the observations than existing reanalysis products. For each case we performed two additional simulations: one in which marine surface roughness height was one-way coupled to forecast wave parameters from a standalone WaveWatch III (WW3) simulation, and another in which WRF and WW3 were two-way coupled using the Coupled-Ocean-Atmosphere-Wave-Sediment-Transport (COAWST) framework. It was found that all the 5-km WRF simulations improved 90-m wind speed statistics for the tropical cyclone case of 08 May 2015 and the cold frontal case of 25 Mar 2016, but not the nor-easter of 18 Jan 2016. The impact of wave coupling on buoy-level (4 m) wind speed was modest and case dependent, but when present, the impact was typically seen at 90 m as well, being as large as 10% in stable conditions. One-way wave coupling consistently reduced wind speeds, improving biases for 25 Mar 2016 but worsening them for 08 May 2015. Two-way wave coupling mitigated these negative biases, improved wave field representation and statistics, and mostly improved 4-m wind field correlation coefficients, at least at the VA buoy, largely due to greater self-consistency between wind and wave fields.

54 ENVIRONMENTAL SCIENCES↗

Assessment of design and location of an active prechamber igniter to enable mixing-controlled combustion of ethanol in heavy-duty engines

Here, this numerical study focuses on assessing the key design parameters of interest for use of an active prechamber igniter as an ignition assistance device to enable mixing-controlled combustion (MCC) of ethanol (E100) in a heavy-duty Caterpillar C9.3B engine. Computational fluid dynamic (CFD) simulations of a baseline diesel and prechamber retrofitted C9.3B at a gross indicated mean effective pressure (IMEPg) of 5 bar and 1800 rpm are carried out using CONVERGE. In particular, the sizing of the prechamber volume, sizing of total orifice cross sectional area (orifice diameter), and location of the prechamber relative to a centrally mounted common rail direct injector are varied to discern the appropriate operational and design characteristics to achieve robust ignition assistance at the selected conditions. Simulation results indicate that use of an active prechamber igniter with E100 as a standalone fuel source can replicate ignition delays and thermal efficiencies similar to diesel combustion at the same engine boundary conditions, thus not requiring any changes to the engine’s air handling system. Igniter mounting location, orifice sizing, and jet targeting were found to have the strongest influence on ignition assistance with preference toward larger orifice diameters that appropriately located heating contributions in near vicinity to the direct injector.

33 ADVANCED PROPULSION SYSTEMS↗

Microbial production of high octane and high sensitivity olefinic ester biofuels

Abstract Background Advanced spark ignition engines require high performance fuels with improved resistance to autoignition. Biologically derived olefinic alcohols have arisen as promising blendstock candidates due to favorable octane numbers and synergistic blending characteristics. However, production and downstream separation of these alcohols are limited by their intrinsic toxicity and high aqueous solubility, respectively. Bioproduction of carboxylate esters of alcohols can improve partitioning and reduce toxicity, but in practice has been limited to saturated esters with characteristically low octane sensitivity. If olefinic esters retain the synergistic blending characteristics of their alcohol counterparts, they could improve the bioblendstock combustion performance while also retaining the production advantages of the ester moiety. Results Optimization of Escherichia coli isoprenoid pathways has led to high titers of isoprenol and prenol, which are not only excellent standalone biofuel and blend candidates, but also novel targets for esterification. Here, a selection of olefinic esters enhanced blendstock performance according to their degree of unsaturation and branching. E. coli strains harboring optimized mevalonate pathways, thioester pathways, and heterologous alcohol acyltransferases (ATF1, ATF2, and SAAT) were engineered for the bioproduction of four novel olefinic esters. Although prenyl and isoprenyl lactate titers were limited to 1.48 ± 0.41 mg/L and 5.57 ± 1.36 mg/L, strains engineered for prenyl and isoprenyl acetate attained titers of 176.3 ± 16.0 mg/L and 3.08 ± 0.27 g/L, respectively. Furthermore, prenyl acetate (20% bRON = 125.8) and isoprenyl acetate (20% bRON = 108.4) exhibited blend properties comparable to ethanol and significantly better than any saturated ester. By further scaling cultures to a 2-L bioreactor under fed-batch conditions, 15.0 ± 0.9 g/L isoprenyl acetate was achieved on minimal medium. Metabolic engineering of acetate pathway flux further improved titer to attain an unprecedented 28.0 ± 1.0 g/L isoprenyl acetate, accounting for 75.7% theoretical yield from glucose. Conclusion Our study demonstrated novel bioproduction of four isoprenoid oxygenates for fuel blending. Our optimized E. coli production strain generated an unprecedented titer of isoprenyl acetate and when paired with its favorable blend properties, may enable rapid scale-up of olefinic alcohol esters for use as a fuel blend additive or as a precursor for longer-chain biofuels and biochemicals.

09 BIOMASS FUELS↗

CATMoS: Collaborative Acute Toxicity Modeling Suite

Background: Humans are exposed to tens of thousands of chemical substances that need to be assessed for their potential toxicity. Acute systemic toxicity testing serves as the basis for regulatory hazard classification, labeling, and risk management. However, it is cost- and time-prohibitive to evaluate all new and existing chemicals using traditional rodent acute toxicity tests. In silico models built using existing data facilitate rapid acute toxicity predictions without using animals. Objectives: The U.S. Interagency Coordinating Committee on the Validation of Alternative Methods Acute Toxicity Workgroup organized an international collaboration to develop in silico models for predicting acute oral toxicity based on five different endpoints: LD50 value, U.S. Environmental Protection Agency hazard categories, Globally Harmonized System for Classification and Labelling hazard categories, very toxic chemicals (LD50 =50 mg/kg), and non-toxic chemicals (LD50 >2000 mg/kg). Methods: An acute oral toxicity data inventory for 11,992 chemicals was compiled, split into training and evaluation sets, and made available to 35 participating international research groups that submitted a total of 139 predictive models. Predictions that fell within the applicability domains of the submitted models were evaluated using external validation sets. These were then combined into consensus models to leverage strengths of individual approaches. Results: The resulting consensus predictions, which leverage the collective strengths of each individual model, form the Collaborative Acute Toxicity Modeling Suite (CATMoS). CATMoS demonstrated high performance in terms of accuracy and robustness when compared to in vivo results. Discussion: CATMoS is being evaluated by regulatory agencies for its utility and applicability as a potential replacement for in vivo rat acute oral toxicity studies. CATMoS predictions for over 800,000 chemicals have been made available via the NTP’s Integrated Chemical Environment. The models are also implemented in a free, standalone open-source tool, OPERA, which allows predictions of new and untested chemicals to be made.

63 RADIATION, THERMAL, AND OTHER ENVIRON. POLLUTAN↗

Validation of Jezebel Reactivity Coefficients and Sensitivity Analysis

Nuclear data validation is often performed today using criticality measurements. The gold standard for criticality measurements is the International Criticality Safety Benchmark Experiment Project (ICSBEP). The validation specifically focuses on the effective multiplication factor ($k_{eff}$). $K_{eff}$ is a relatively easy parameter to infer and has reduced uncertainty due to being at or above critical. However, while $k_{eff}$ is the most documented parameter and its uncertainties and sensitivities have been evaluated in great detail, it cannot be used as a standalone metric to determine inaccuracies in nuclear data (e.g., cross section data, PFNS, nu), which is based on theory, physics, and differential measurements. The Experiments Underpinned by Computational Learning for Improvements in nuclear Data (EUCLID) project aims to identify compensating errors in specific isotope nuclear data by optimally designing experiments that are, or are not sensitive to a suite of measurement parameters beyond $k_{eff}$. By identifying parameters that are sensitive to each other, oppositely sensitive, or have substantial magnitude differences in sensitivity, experiments can be designed to constrain questionable nuclear data. One sensitivity that is of particular interest to this project includes the sensitivity of reactivity coefficients. Reactivity coefficients compare reactivity, which is related to $k_{eff}$ at two different states therefore being sensitive to small changes in the system. The most common type of reactivity coefficient measurements is comparison to void for a small sample within the assembly. It is key that the sample sizes are small enough to not affect the flux of the full system. Reactivity coefficients were evaluated for many early experiments to better understand transport corrected cross sections. In fact, ICSBEP includes reactivity coefficient results as “Supplemental Measurements” in appendices for a handful of older benchmarks. One of those benchmarks is Jezebel, the bare Pu critical assembly. This paper compares new simulations of reactivity coefficients for Jezebel, and explores the sensitivity of reactivity coefficients to small changes in nuclear data.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

bmdrc: Python package for quantifying phenotypes from chemical exposures with benchmark dose modeling

Though chemical exposures are known to potentially have negative impacts on health, including contributing to chronic diseases such as cancer, the quantitative contribution of risk is not fully understood for every chemical. A commonly used approach to quantify levels of risk is to measure the proportion of organisms (such as a total number of zebrafish on a plate or mice in a cage) with abnormal behavioral responses or morphology at increasing concentrations of chemical exposure. A particular challenge with processing the proportional data from these assays is the appropriate estimation of chemical concentration levels that result in malformations or acute toxicity, as these values typically vary between experimental measurements. The recommended approach by the Environmental Protection Agency (EPA) is to fit benchmark dose curves with specific filters and model fitting steps, which are crucial to properly processing the proportional data. Several tools exist for the fitting of benchmark dose response curves, but none are standalone Python libraries built to process both morphological and behavioral data as proportions with all the EPA recommended filters, filter parameters, models, and model parameters. Thus, here we present the benchmark dose response curve (bmdrc) Python library, which was built to closely follow these EPA guidelines with helpful visualizations of filters and fitted model curves, and reports for reproducibility purposes. bmdrc is open-source and has demonstrated utility as a support package to an existing web portal for information on chemicals (https://srp.pnnl.gov). Our package will support any toxicology analysis where the response is a proportional value at increasing levels of a concentration of a chemical or chemical mixture.

Superfund↗