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At least 217 records · Page 12

Islet: interpolation semi-Lagrangian element-based transport

Abstract. Advection of trace species, or tracers, also called tracer transport, in models of the atmosphere and other physical domains is an important and potentially computationally expensive part of a model's dynamical core. Semi-Lagrangian (SL) advection methods are efficient because they permit a time step much larger than the advective stability limit for explicit Eulerian methods without requiring the solution of a globally coupled system of equations as implicit Eulerian methods do. Thus, to reduce the computational expense of tracer transport, dynamical cores often use SL methods to advect tracers. The class of interpolation semi-Lagrangian (ISL) methods contains potentially extremely efficient SL methods. We describe a finite-element ISL transport method that we call the interpolation semi-Lagrangian element-based transport (Islet) method, such as for use with atmosphere models discretized using the spectral element method. The Islet method uses three grids that share an element grid: a dynamics grid supporting, for example, the Gauss–Legendre–Lobatto basis of degree three; a physics parameterizations grid with a configurable number of finite-volume subcells per element; and a tracer grid supporting use of Islet bases with particular basis again configurable. This method provides extremely accurate tracer transport and excellent diagnostic values in a number of verification problems.

58 GEOSCIENCES↗

Application of adaptive hierarchical sparse grid collocation to the uncertainty quantification of nuclear reactor simulators

Recent efforts in the application of uncertainty quantification to nuclear systems have utilized methods based on generalized perturbation theory and stochastic sampling. While these methods have proven to be effective they both have major drawbacks that may impede further progress. A relatively new approach based on spectral elements for uncertainty quantification is applied in this paper to several problems in reactor simulation. Spectral methods based on collocation attempt to couple the approximation free nature of stochastic sampling methods with the determinism of generalized perturbation theory. The specific spectral method used in this paper employs both the Smolyak algorithm and adaptivity by using Newton-Cotes collocation points along with linear hat basis functions. Using this approach, a surrogate model for the outputs of a computer code is constructed hierarchically by adaptively refining the collocation grid until the interpolant is converged to a user-defined threshold. The method inherently fits into the framework of parallel computing and allows for the extraction of meaningful statistics and data that are not within reach of stochastic sampling and generalized perturbation theory. This paper aims to demonstrate the advantages of spectral methods-especially when compared to current methods used in reactor physics for uncertainty quantification-and to illustrate their full potential. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Dakota Uncertainty Quantification Methods Applied to the CFD code Nek5000

Predictive modeling and simulation of the performance of a nuclear reactor and its fuel is a challenging task because of the large number of coupled physical phenomena that must be addressed. In addition to this intrinsic complexity, model uncertainty must be accounted for in any analysis if the model will be used to facilitate design or operational decisions which may impact safety and performance. Rigorous, structured uncertainty analyses are performed by first characterizing the model's input uncertainties and, by propagating the uncertainty through the model in order to estimate the output's uncertainty. This paper presents the state of advancement of the Nuclear Energy Advanced Modeling and Simulation (NEAMS) project to characterize the uncertainty of the CFD code Nek5000 using the Dakota package. Nek5000 is a high order spectral element computational fluid dynamics (CFD) code developed at Argonne National Laboratory for high resolution spectral-filtered large eddy simulations (LESs) and unsteady Reynolds averaged Navier-Stokes (RANS) simulations. The Dakota package developed at Sandia National Laboratory can be integrated with many scientific and engineering codes to facilitate efficient, effective uncertainty quantification (UQ) and sensitivity analyses. Dakota is designed to interface with external packages/codes such as Nek5000 through a script-driven interface called fork. Such interface provides maximum flexibility to the users for pre- and post-processing tasks preceding and following each function evaluation. (authors)

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

A Petascale Non-Hydrostatic Atmospheric Dynamical Core in the HOMME Framework

The High-Order Method Modeling Environment (HOMME) is a framework for building scalable, conserva- tive atmospheric models for climate simulation and general atmospheric-modeling applications. Its spatial discretizations are based on Spectral-Element (SE) and Discontinuous Galerkin (DG) methods. These are local methods employing high-order accurate spectral basis-functions that have been shown to perform well on massively parallel supercomputers at any resolution and scale particularly well at high resolutions. HOMME provides the framework upon which the CAM-SE community atmosphere model dynamical-core is constructed. In its current incarnation, CAM-SE employs the hydrostatic primitive-equations (PE) of motion, which limits its resolution to simulations coarser than 0.1 per grid cell. The primary objective of this project is to remove this resolution limitation by providing HOMME with the capabilities needed to build nonhydrostatic models that solve the compressible Euler/Navier-Stokes equations.

58 GEOSCIENCES↗

Robust Metric-Aligned Quad-Dominant Meshing Using L(sub p) Centroidal Voronoi Tessellation

We introduce a meshing algorithm that can be used to both generate and adapt meshes for bounded domains in an anisotropic manner. This is particularly beneficial when anisotropic flow features like shock waves or contact discontinuities are present in the computational domain. The algorithm presented in this paper is based upon meshing under the imposed Riemannian metric tensor, which controls the orientation and size of the mesh elements. In this way there is no need for user intervention to recognize these features. We demonstrate that the method indeed aligns the elements with the underlying metric and produces right-angled simplices that can be recombined into quadrilateral elements. The aim is to eventually incorporate this meshing strategy in the monolithic high-order spectral element solver that is currently being developed at NASA Ames. This paper has two main contributions: First, we demonstrate that we can generate quad-dominant metric-aligned meshes for bounded domains using a generalized form of L(sub p)-Centroidal Voronoi Tessellation (L(sub p)-CVT). Unlike previous works, we do not rely on a background mesh and discretize the bounded domain in a hierarchical way by first discretizing the boundaries and then the volume using the underlying metric. Second, we present an alternative for clipping the Voronoi cells on the boundary, which is common practice in CVT-based meshing algorithms, by reconstructing the Voronoi cells using the defined metric field. In this way we avoid the geometrical complexity of the clipping procedure and we show that we evaluate the energy and its gradient correctly. We show that the reconstruction of the computational domain is consistent with the Lloyds’ algorithm that is used to compute the L(sub p)-CVT.

Centroidal↗

Multispectral Snapshot Imagers Onboard Small Satellite Formations for Multi-Angular Remote Sensing

Multispectral snapshot imagers are capable of producing 2D spatial images with a single exposure at selected, numerous wavelengths using the same camera, therefore operate differently from push broom or whiskbroom imagers. They are payloads of choice in multi-angular, multi-spectral imaging missions that use small satellites flying in controlled formation, to retrieve Earth science measurements dependent on the targets Bidirectional Reflectance-Distribution Function (BRDF). Narrow fields of view are needed to capture images with moderate spatial resolution. This paper quantifies the dependencies of the imagers optical system, spectral elements and camera on the requirements of the formation mission and their impact on performance metrics such as spectral range, swath and signal to noise ratio (SNR). All variables and metrics have been generated from a comprehensive, payload design tool. The baseline optical parameters selected (diameter 7 cm, focal length 10.5 cm, pixel size 20 micron, field of view 1.15 deg) and snapshot imaging technologies are available. The spectral components shortlisted were waveguide spectrometers, acousto-optic tunable filters (AOTF), electronically actuated Fabry-Perot interferometers, and integral field spectrographs. Qualitative evaluation favored AOTFs because of their low weight, small size, and flight heritage. Quantitative analysis showed that waveguide spectrometers perform better in terms of achievable swath (10-90 km) and SNR (greater than 20) for 86 wavebands, but the data volume generated will need very high bandwidth communication to downlink. AOTFs meet the external data volume caps well as the minimum spectral (wavebands) and radiometric (SNR) requirements, therefore are found to be currently feasible in spite of lower swath and SNR.

Nag, Sreeja↗

Adaptive mesh refinement for steady flows in Nek5000

Adaptive mesh refinement is performed in the framework of the spectral element method augmented by approaches to error estimation and control. The h-refinement technique is used for adapting the mesh, where selected grid elements are split by a quadtree (2D) or octree (3D) structure. Continuity between parent-child elements is enforced by high-order interpolation of the solution across the common faces. Parallel mesh partitioning and grid management respectively, are taken care of by the external libraries ParMETIS and p4est. Two methods are considered for estimating and controlling the error of the solution. The first error estimate is local and based on the spectral properties of the solution on each element. This method gives a local measure of the L-2-norm of the solution over the entire computational domain. The second error estimate uses the dual-weighted residuals method - it is based on and takes into account both the local properties of the solution and the global dependence of the error in the solution via an adjoint problem. The objective of this second approach is to optimize the computation of a given functional of physical interest. The simulations are performed by using the code Nek5000 and three steady-state test cases are studied: a two-dimensional lid-driven cavity at Re = 7, 500, a two-dimensional flow past a cylinder at Re = 40, and a three-dimensional lid-driven cavity at Re = 2,000 with a moving lid tilted by an angle of 30 degrees. Finally, the efficiency of both error estimators is compared in terms of refinement patterns and accuracy on the functional of interest. In the case of the adjoint error estimators, the trend on the error of the functional is shown to be correctly represented up to a multiplicative constant.

42 ENGINEERING↗

Aircraft Engine Noise Scattering by Fuselage and Wings: A Computational Approach

The paper presents a time-domain method for computation of sound radiation from aircraft engine sources to the far field. The effects of non-uniform flow around the aircraft and scattering of sound by fuselage and wings are accounted for in the formulation. The approach is based on the discretization of the inviscid flow equations through a collocation form of the discontinuous Galerkin spectral element method. An isoparametric representation of the underlying geometry is used in order to take full advantage of the spectral accuracy of the method. Large-scale computations are made possible by a parallel implementation based on message passing. Results obtained for radiation from an axisymmetric nacelle alone are compared with those obtained when the same nacelle is installed in a generic configuration, with and without a wing. 0 2002 Elsevier Science Ltd. All rights reserved.

Farassat, F.↗

Aircraft Engine Noise Scattering by Fuselage and Wings: A Computational Approach

The paper presents a time-domain method for computation of sound radiation from aircraft engine sources to the far-field. The effects of nonuniform flow around the aircraft and scattering of sound by fuselage and wings are accounted for in the formulation. The approach is based on the discretization of the inviscid flow equations through a collocation form of the Discontinuous Galerkin spectral element method. An isoparametric representation of the underlying geometry is used in order to take full advantage of the spectral accuracy of the method. Large-scale computations are made possible by a parallel implementation based on message passing. Results obtained for radiation from an axisymmetric nacelle alone are compared with those obtained when the same nacelle is installed in a generic configuration, with and without a wing.

Stanescu, D.↗

Inverse Subspace Iteration for Spectral Stochastic Finite Element Methods

We study random eigenvalue problems in the context of spectral stochastic finite elements. In particular, given a parameter-dependent, symmetric positive-definite matrix operator, we explore the performance of algorithms for computing its eigenvalues and eigenvectors represented using polynomial chaos expansions. We formulate a version of stochastic inverse subspace iteration, which is based on the stochastic Galerkin finite element method, and we compare its accuracy with that of Monte Carlo and stochastic collocation methods. The coefficients of the eigenvalue expansions are computed from a stochastic Rayleigh quotient. Our approach allows the computation of interior eigenvalues by deflation methods, and we can also compute the coefficients of multiple eigenvectors using a stochastic variant of the modified Gram-Schmidt process. The effectiveness of the methods is illustrated by numerical experiments on benchmark problems arising from vibration analysis.

97 MATHEMATICS AND COMPUTING↗

CARDINAL

Cardinal is a code that automates the workflow for iteratively solving neutral particle transport via the OpenMC code and computational fluid dynamics via the NekRS code within the Multiphysics Object Oriented Simulation Environment (MOOSE), a finite element framework for solving general partial differential equations. Cardinal establishes a mapping between the Monte Carlo geometry representation used in OpenMC and the spectral element mesh used in NekRS to other physics applications built upon the MOOSE framework, allowing high-resolution particle transport and fluid dynamics physics feedback to the MOOSE application ecosystem. Heat generation rates as solved by OpenMC are used as heat sources in MOOSE, while the temperature and density fields from NekRS are used as conjugate heat transfer boundary conditions and/or source fields in MOOSE. OpenMC, Nek5000, and MOOSE are open source, community-developed simulation codes.

NOVAK, APRILJEAN RODGERS↗

A Higher-Order Space-Time Finite-Element Method for Moving-Body and Fluid-Structure Interaction Problems

We present a high-order finite-element method for moving body and fluid/structure interaction problems. Our solution strategy is based on a space-time discontinuous Galerkin (DG) spectral-element discretization which extends to arbitrary order of accuracy. The space-time DG discretization is a natural choice for moving body and fluid-structure interaction problems as moving surfaces are incorporated simply by considering curved space-time elements whose space-time faces align with the moving body. We present a discontinuous-Galerkin in time discretization for six-degree of motion modeling of rigid bodies, and a continuous-Galerkin discretization for equations of linear elasticity to generate curved space-time meshes. Numerical results for several simple 2D test cases are presented in order to verify the implementation of the different models. Finally we present a preliminary dynamic simulation of a parachute.

High-Order↗

2-D seismic wave propagation using the distributional finite-difference method: further developments and potential for global seismology

SUMMARY We present a time-domain distributional finite-difference scheme based on the Lebedev staggered grid for the numerical simulation of wave propagation in acoustic and elastic media. The central aspect of the proposed method is the representation of the stresses and displacements with different sets of B-splines functions organized according to the staggered grid. The distributional finite-difference approach allows domain-decomposition, heterogeneity of the medium, curvilinear mesh, anisotropy, non-conformal interfaces, discontinuous grid and fluid–solid interfaces. Numerical examples show that the proposed scheme is suitable to model wave propagation through the Earth, where sharp interfaces separate large, relatively homogeneous layers. A few domains or elements are sufficient to represent the Earth’s internal structure without relying on advanced meshing techniques. We compare seismograms obtained with the proposed scheme and the spectral element method, and we show that our approach offers superior accuracy, reduced memory usage, and comparable efficiency.

Geochemistry & Geophysics↗

Physics–Dynamics Coupling with Element-Based High-Order Galerkin Methods: Quasi-Equal-Area Physics Grid

Atmospheric modeling with element-based high-order Galerkin methods presents a unique challenge to the conventional physics–dynamics coupling paradigm, due to the highly irregular distribution of nodes within an element and the distinct numerical characteristics of the Galerkin method. The conventional coupling procedure is to evaluate the physical parameterizations ( physics) on the dynamical core grid. Evaluating the physics at the nodal points exacerbates numerical noise from the Galerkin method, enabling and amplifying local extrema at element boundaries. Grid imprinting may be substantially reduced through the introduction of an entirely separate, approximately isotropic finite-volume grid for evaluating the physics forcing. Integration of the spectral basis over the control volumes provides an area-average state to the physics, which is more representative of the state in the vicinity of the nodal points rather than the nodal point itself and is more consistent with the notion of a “large-scale state” required by conventional physics packages. This study documents the implementation of a quasi-equal-area physics grid into NCAR’s Community Atmosphere Model Spectral Element and is shown to be effective at mitigating grid imprinting in the solution. The physics grid is also appropriate for coupling to other components within the Community Earth System Model, since the coupler requires component fluxes to be defined on a finite-volume grid, and one can be certain that the fluxes on the physics grid are, indeed, volume averaged.

54 ENVIRONMENTAL SCIENCES↗

Passive Confirmation of the Presence Of High-Explosive Material Via Neutron Transmission Spectroscopy

The goal of this project was to explore a novel approach for identifying presence and potential types of high explosives (HE) in treaty-controlled items with passive neutron sources by using passive neutron transmission spectroscopy. We predominantly look to measure relative elemental abundance of Carbon, Hydrogen, Oxygen, and Nitrogen (CHON) since most relevant materials are certain mix of these elements, as shown in Table 1. Previously, most studies exploring potential identification of CHON elemental content of targets in the vicinity of passive neutron source were focused solely on gamma spectroscopy using high resolution gamma detectors. Using neutron transmission spectroscopy with pulse-shape discrimination (PSD) capable organic scintillators is not only a novel idea in of itself, but arguably necessary for accurate identification of the CHON elemental content of an interrogated target. While high resolution gamma spectroscopy in principle can determine a presence of hydrogen and nitrogen, it is effectively blind to a quantitatively measuring areal densities of C, O. The initially proposed approach, described in detail in the project proposal, was to leverage previous Monte Carlo study on neutron transmission spectroscopy using slab shaped target interrogated with well-collimated (“pencil”) neutron beam. In this study, a simulated test CO 2 target was interrogated by a pencil neutron beam and transmitted neutron spectra were measured using PSD capable organic scintillator using MLEM based unfolding technique. To establish relative elemental content of carbon and oxygen, the unfolded neutron spectrum was fit with a parametrized combination of their respective elemental spectral templates. The individual spectral template was calculated by convoluting ENDF neutron crosssection with the known resolution of the PSD detector used in the study. This approach in the studied configuration successfully quantitatively established relative elemental composition of carbon and oxygen.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Enhancements to the SHARP Build System and NEK5000 Coupling

The SHARP project for the Department of Energy's Nuclear Energy Advanced Modeling and Simulation (NEAMS) program provides a multiphysics framework for coupled simulations of advanced nuclear reactor designs. It provides an overall coupling environment that utilizes custom interfaces to couple existing physics codes through a common spatial decomposition and unique solution transfer component. As of this writing, SHARP couples neutronics, thermal hydraulics, and structural mechanics using PROTEUS, Nek5000, and Diablo respectively. This report details two primary SHARP improvements regarding the Nek5000 and Diablo individual physics codes: (1) an improved Nek5000 coupling interface that lets SHARP achieve a vast increase in overall solution accuracy by manipulating the structure of the internal Nek5000 spatial mesh, and (2) the capability to seamlessly couple structural mechanics calculations into the framework through improvements to the SHARP build system. The Nek5000 coupling interface now uses a barycentric Lagrange interpolation method that takes the vertex-based power and density computed from the PROTEUS neutronics solver and maps it to the user-specified, general-order Nek5000 spectral element mesh. Before this work, SHARP handled this vertex-based solution transfer in an averaging-based manner. SHARP users can now achieve higher levels of accuracy by specifying any arbitrary Nek5000 spectral mesh order. This improvement takes the average percentage error between the PROTEUS power solution and the Nek5000 interpolated result down drastically from over 23 % to just above 2 %, and maintains the correct power profile. We have integrated Diablo into the SHARP build system to facilitate the future coupling of structural mechanics calculations into SHARP. Previously, simulations involving Diablo were done in an iterative manner, requiring a large amount manual work, and left only as a task for advanced users. This report will detail a new Diablo build system that was implemented using GNU Autotools, mirroring much of the current SHARP build system, and easing the use of structural mechanics calculations for end-users of the SHARP multiphysics framework. It lets users easily build and use Diablo as a stand-alone simulation, as well as fully couple with the other SHARP physics modules. The top-level SHARP build system was modified to allow Diablo to hook in directly. New dependency handlers were implemented to let SHARP users easily build the framework with these new simulation capabilities. The remainder of this report will describe this work in full, with a detailed discussion of the overall design philosophy of SHARP, the new solution interpolation method introduced, and the Diablo integration work. We will conclude with a discussion of possible future SHARP improvements that will serve to increase solution accuracy and framework capability.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Parallel 3D Mortar Element Method for Adaptive Nonconforming Meshes

High order methods are frequently used in computational simulation for their high accuracy. An efficient way to avoid unnecessary computation in smooth regions of the solution is to use adaptive meshes which employ fine grids only in areas where they are needed. Nonconforming spectral elements allow the grid to be flexibly adjusted to satisfy the computational accuracy requirements. The method is suitable for computational simulations of unsteady problems with very disparate length scales or unsteady moving features, such as heat transfer, fluid dynamics or flame combustion. In this work, we select the Mark Element Method (MEM) to handle the non-conforming interfaces between elements. A new technique is introduced to efficiently implement MEM in 3-D nonconforming meshes. By introducing an "intermediate mortar", the proposed method decomposes the projection between 3-D elements and mortars into two steps. In each step, projection matrices derived in 2-D are used. The two-step method avoids explicitly forming/deriving large projection matrices for 3-D meshes, and also helps to simplify the implementation. This new technique can be used for both h- and p-type adaptation. This method is applied to an unsteady 3-D moving heat source problem. With our new MEM implementation, mesh adaptation is able to efficiently refine the grid near the heat source and coarsen the grid once the heat source passes. The savings in computational work resulting from the dynamic mesh adaptation is demonstrated by the reduction of the the number of elements used and CPU time spent. MEM and mesh adaptation, respectively, bring irregularity and dynamics to the computer memory access pattern. Hence, they provide a good way to gauge the performance of computer systems when running scientific applications whose memory access patterns are irregular and unpredictable. We select a 3-D moving heat source problem as the Unstructured Adaptive (UA) grid benchmark, a new component of the NAS Parallel Benchmarks (NPB). In this paper, we present some interesting performance results of ow OpenMP parallel implementation on different architectures such as the SGI Origin2000, SGI Altix, and Cray MTA-2.

Feng, Huiyu↗

A COMPREHENSIVE ANALYSIS OF FERMI GAMMA-RAY BURST DATA. I. SPECTRAL COMPONENTS AND THE POSSIBLE PHYSICAL ORIGINS OF LAT/GBM GRBs

We present a systematic analysis of the spectral and temporal properties of 17 gamma-ray bursts (GRBs) codetected by the Gamma-ray Burst Monitor (GBM) and the Large Area Telescope (LAT) onboard the Fermi satellite in 2010 May. We performed a time-resolved spectral analysis of all the bursts, with the finest temporal resolution allowed by statistics, to reduce temporal smearing of different spectral components. We found that the time-resolved spectra of 14 out of 17 GRBs are best modeled with the classical 'Band' function over the entire Fermi spectral range, which may suggest a common origin for emissions detected by the LAT and GBM. GRB 090902B and GRB 090510 require the superposition of an MeV component and an extra power-law component, with the former having a sharp cutoff above E{sub p} . For GRB 090902B, this MeV component becomes progressively narrower as the time bin gets smaller, and can be fit with a Planck function as the time bin becomes small enough. In general, we speculate that, phenomenologically, there may be three elemental spectral components that shape the time-resolved GRB spectra: a Band-function component (e.g., in GRB 080916C) that extends over a wide energy range and does not narrow with decreasing time bins, which may be of non-thermal origin; a quasi-thermal component (e.g., in GRB 090902B), with spectra progressively narrowing with reducing time bins; and another non-thermal power-law component extending to high energies. The spectra of different bursts may be decomposed into one or more of these elemental components. We compare this sample with the Burst and Transient Source Experiment sample and investigate some correlations among spectral parameters. We discuss the physical implications of the data analysis results for GRB prompt emission, including jet composition (matter-dominated versus Poynting-flux-dominated outflow), emission sites (internal shock, external shock, or photosphere), as well as radiation mechanisms (synchrotron, synchrotron self-Compton, or thermal Compton upscattering).

79 ASTRONOMY AND ASTROPHYSICS↗