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At least 217 records · Page 12
All sourcesNASA NTRSDOE OSTI
DOE OSTI2019

Machine Learning Applied to Star–Galaxy–QSO Classification and Stellar Effective Temperature Regression

In modern astrophysics, machine learning has increasingly gained popularity with its incredibly powerful ability to make predictions or calculated suggestions for large amounts of data. We describe an application of the supervised machine-learning algorithm, random forests (RF), to the star/galaxy/QSO classification and the stellar effective temperature regression based on the combination of Large Sky Area Multi-Object Fiber Spectroscopic Telescope and Sloan Digital Sky Survey spectroscopic data. This combination enables us to obtain reliable predictions with one of the largest training samples ever used. The training samples are built with a nine-color data set of about three million objects for the classification and a seven-color data set of over one million stars for the regression. The performance of the classification and regression is examined with validation and blind tests on the objects in the RAdial Velocity Extension, 6dFGS, UV-bright Quasar Survey and Apache Point Observatory Galactic Evolution Experiment surveys. We demonstrate that RF is an effective algorithm, with classification accuracies higher than 99% for stars and galaxies, and higher than 94% for QSOs. These accuracies are higher than machine-learning results in former studies. The total standard deviations of the regression are smaller than 200 K, which is similar to those of some spectrum-based methods. The machine-learning algorithm with the broad-band photometry provides us with a more efficient approach for dealing with massive amounts of astrophysical data than do traditional color cuts and spectral energy distribution fits.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

X-Ray Spectra and Multiwavelength Machine Learning Classification for Likely Counterparts to Fermi 3FGL Unassociated Sources

We conduct X-ray spectral fits on 184 likely counterparts to Fermi-LAT 3FGL unassociated sources. Characterization and classification of these sources allows for more complete population studies of the high-energy sky. Most of these X-ray spectra are well fit by an absorbed power-law model, as expected for a population dominated by blazars and pulsars. A small subset of seven X-ray sources have spectra unlike the power law expected from a blazar or pulsar and may be linked to coincident stars or background emission. We develop a multiwavelength machine learning classifier to categorize unassociated sources into pulsars and blazars using gamma-ray and X-ray observations. Training a random forest (RF) procedure with known pulsars and blazars, we achieve a cross-validated classification accuracy of 98.6%. Applying the RF routine to the unassociated sources returned 126 likely blazar candidates (defined as P {sub bzr} ≥ 90%) and five likely pulsar candidates (P {sub bzr} ≤ 10%). Our new X-ray spectral analysis does not drastically alter the RF classifications of these sources compared to previous works, but it builds a more robust classification scheme and highlights the importance of X-ray spectral fitting. Our procedure can be further expanded with UV, visual, or radio spectral parameters or by measuring flux variability.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2022

Photometric Classification of Early-time Supernova Light Curves with SCONE

Abstract In this work, we present classification results on early supernova light curves from SCONE, a photometric classifier that uses convolutional neural networks to categorize supernovae (SNe) by type using light-curve data. SCONE is able to identify SN types from light curves at any stage, from the night of initial alert to the end of their lifetimes. Simulated LSST SNe light curves were truncated at 0, 5, 15, 25, and 50 days after the trigger date and used to train Gaussian processes in wavelength and time space to produce wavelength–time heatmaps. SCONE uses these heatmaps to perform six-way classification between SN types Ia, II, Ibc, Ia-91bg, Iax, and SLSN-I. SCONE is able to perform classification with or without redshift, but we show that incorporating redshift information improves performance at each epoch. SCONE achieved 75% overall accuracy at the date of trigger (60% without redshift), and 89% accuracy 50 days after trigger (82% without redshift). SCONE was also tested on bright subsets of SNe ( r < 20 mag) and produced 91% accuracy at the date of trigger (83% without redshift) and 95% five days after trigger (94.7% without redshift). SCONE is the first application of convolutional neural networks to the early-time photometric transient classification problem. All of the data processing and model code developed for this paper can be found in the SCONE software package 1 1 github.com/helenqu/scone located at github.com/helenqu/scone (Qu 2021).

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2020

On Neural Architectures for Astronomical Time-series Classification with Application to Variable Stars

Despite the utility of neural networks (NNs) for astronomical time-series classification, the proliferation of learning architectures applied to diverse data sets has thus far hampered a direct intercomparison of different approaches. Here we perform the first comprehensive study of variants of NN-based learning and inference for astronomical time series, aiming to provide the community with an overview on relative performance and, hopefully, a set of best-in-class choices for practical implementations. In both supervised and self-supervised contexts, we study the effects of different time-series-compatible layer choices, namely the dilated temporal convolutional neural network (dTCNs), long-short term memory NNs, gated recurrent units and temporal convolutional NNs (tCNNs). Additionally, we also study the efficacy and performance of encoder-decoder (i.e., autoencoder) networks compared to direct classification networks, different pathways to include auxiliary (non-time-series) metadata, and different approaches to incorporate multi-passband data (i.e., multiple time series per source). Performance—applied to a sample of 17,604 variable stars (VSs) from the MAssive Compact Halo Objects (MACHO) survey across 10 imbalanced classes—is measured in training convergence time, classification accuracy, reconstruction error, and generated latent variables. We find that networks with recurrent NNs generally outperform dTCNs and, in many scenarios, yield to similar accuracy as tCNNs. In learning time and memory requirements, convolution-based layers perform better. We conclude by discussing the advantages and limitations of deep architectures for VS classification, with a particular eye toward next-generation surveys such as the Legacy Survey of Space and Time, the Roman Space Telescope, and Zwicky Transient Facility.

79 ASTRONOMY AND ASTROPHYSICS↗
NASA NTRS2012

Classification of ASKAP Vast Radio Light Curves

The VAST survey is a wide-field survey that observes with unprecedented instrument sensitivity (0.5 mJy or lower) and repeat cadence (a goal of 5 seconds) that will enable novel scientific discoveries related to known and unknown classes of radio transients and variables. Given the unprecedented observing characteristics of VAST, it is important to estimate source classification performance, and determine best practices prior to the launch of ASKAP's BETA in 2012. The goal of this study is to identify light curve characterization and classification algorithms that are best suited for archival VAST light curve classification. We perform our experiments on light curve simulations of eight source types and achieve best case performance of approximately 90% accuracy. We note that classification performance is most influenced by light curve characterization rather than classifier algorithm.

radio astronomy↗
NASA NTRS2014

CANDELS Visual Classifications: Scheme, Data Release, and First Results

We have undertaken an ambitious program to visually classify all galaxies in the five CANDELS fields down to H <24.5 involving the dedicated efforts of 65 individual classifiers. Once completed, we expect to have detailed morphological classifications for over 50,000 galaxies spanning 0 < z < 4 over all the fields. Here, we present our detailed visual classification scheme, which was designed to cover a wide range of CANDELS science goals. This scheme includes the basic Hubble sequence types, but also includes a detailed look at mergers and interactions, the clumpiness of galaxies, k-corrections, and a variety of other structural properties. In this paper, we focus on the first field to be completed - GOODS-S, which has been classified at various depths. The wide area coverage spanning the full field (wide+deep+ERS) includes 7634 galaxies that have been classified by at least three different people. In the deep area of the field, 2534 galaxies have been classified by at least five different people at three different depths. With this paper, we release to the public all of the visual classifications in GOODS-S along with the Perl/Tk GUI that we developed to classify galaxies. We present our initial results here, including an analysis of our internal consistency and comparisons among multiple classifiers as well as a comparison to the Sersic index. We find that the level of agreement among classifiers is quite good and depends on both the galaxy magnitude and the galaxy type, with disks showing the highest level of agreement and irregulars the lowest. A comparison of our classifications with the Sersic index and restframe colors shows a clear separation between disk and spheroid populations. Finally, we explore morphological k-corrections between the V-band and H-band observations and find that a small fraction (84 galaxies in total) are classified as being very different between these two bands. These galaxies typically have very clumpy and extended morphology or are very faint in the V-band.

Visual↗
NASA NTRS2012

Advances in Spectral-Spatial Classification of Hyperspectral Images

Recent advances in spectral-spatial classification of hyperspectral images are presented in this paper. Several techniques are investigated for combining both spatial and spectral information. Spatial information is extracted at the object (set of pixels) level rather than at the conventional pixel level. Mathematical morphology is first used to derive the morphological profile of the image, which includes characteristics about the size, orientation, and contrast of the spatial structures present in the image. Then, the morphological neighborhood is defined and used to derive additional features for classification. Classification is performed with support vector machines (SVMs) using the available spectral information and the extracted spatial information. Spatial postprocessing is next investigated to build more homogeneous and spatially consistent thematic maps. To that end, three presegmentation techniques are applied to define regions that are used to regularize the preliminary pixel-wise thematic map. Finally, a multiple-classifier (MC) system is defined to produce relevant markers that are exploited to segment the hyperspectral image with the minimum spanning forest algorithm. Experimental results conducted on three real hyperspectral images with different spatial and spectral resolutions and corresponding to various contexts are presented. They highlight the importance of spectral–spatial strategies for the accurate classification of hyperspectral images and validate the proposed methods.

hyperspectral image↗
NASA NTRSDate not supplied

Risk Classification Modernization

NASA’s risk classification system dates back to an era when every new NASA space mission was a one-of-a-kind build, and the only way to obtain reliability was as a by-product through a combination of reliability analyses, extensive and stringent quality requirements, and extensive testing. Originally, there were very limited commercial capabilities to develop systems to work reliably in space, so NASA considered its own homegrown approach the only recipe for success. This approach involved very detailed and prescriptive piece-part controls and no reliance on (and to some extent a rejection of) any type of commercial practices. Often risk was considered to be the lowest when NASA had the maximum amount of control and prescription, and the highest when commercial practices were largely employed, and these principles drove risk classification in the agency. Over time, however, commercial capabilities grew, and many products became standardized and commercialized, while the agency maintained its tried-and-true approach, paying little attention to the evolution of the commercial sector. This presentation introduces GSFC’s new approach at risk classification, which includes classification of components and full spacecraft, as well as of constellations of spacecraft.

risk↗
NASA NTRS2022

Lumping and splitting: Toward a classification of mineral natural kinds

How does one best subdivide nature into kinds? All classification systems require rules for lumping similar objects into the same category, while splitting differing objects into separate categories. Mineralogical classification systems are no exception. Our work in placing mineral species within their evolutionary contexts necessitates this lumping and splitting because we classify “mineral natural kinds” based on unique combinations of formational environments and continuous temperature-pressure-composition phase space. Consequently, we lump two minerals into a single natural kind only if they: (1) are part of a continuous solid solution; (2) are isostructural or members of a homologous series; and (3) form by the same process. A systematic survey based on these criteria suggests that 2310 (~41%) of 5659 IMA-approved mineral species can be lumped with one or more other mineral species, corresponding to 667 “root mineral kinds,” of which 353 lump pairs of mineral species, while 129 lump three species. Eight mineral groups, including cancrinite, eudialyte, hornblende, jahnsite, labuntsovite, satorite, tetradymite, and tourmaline, are represented by 20 or more lumped IMA-approved mineral species. A list of 5659 IMA-approved mineral species corresponds to 4016 root mineral kinds according to these lumping criteria. The evolutionary system of mineral classification assigns an IMA-approved mineral species to two or more mineral natural kinds under either of two splitting criteria: (1) if it forms in two or more distinct paragenetic environments, or (2) if cluster analysis of the attributes of numerous specimens reveals more than one discrete combination of chemical and physical attributes. A total of 2310 IMA-approved species are known to form by two or more paragenetic processes and thus correspond to multiple mineral natural kinds; however, adequate data resources are not yet in hand to perform cluster analysis on more than a handful of mineral species. We find that 1623 IMA-approved species (~29%) correspond exactly to mineral natural kinds; i.e., they are known from only one paragenetic environment and are not lumped with another species in our evolutionary classification. Greater complexity is associated with 587 IMA-approved species that are both lumped with one or more other species and occur in two or more paragenetic environments. In these instances, identification of mineral natural kinds may involve both lumping and splitting of the corresponding IMA-approved species on the basis of multiple criteria. Based on the numbers of root mineral kinds, their known varied modes of formation, and predictions of minerals that occur on Earth but are as yet undiscovered and described, we estimate that Earth holds more than 10000 mineral natural kinds.

Philosophy of mineralogy↗
NASA NTRSDate not supplied

Risk Classification Modernization

NASA’s risk classification system dates back to an era when every new NASA space mission was a one-of-a-kind build, and the only way to obtain reliability was as a by-product through a combination of reliability analyses, extensive and stringent quality requirements, and extensive testing. Originally, there were very limited commercial capabilities to develop systems to work reliably in space, so NASA considered its own homegrown approach the only recipe for success. This approach involved very detailed and prescriptive piece-part controls and no reliance on (and to some extent a rejection of) any type of commercial practices. Often risk was considered to be the lowest when NASA had the maximum amount of control and prescription, and the highest when commercial practices were largely employed, and these principles drove risk classification in the agency. Over time, however, commercial capabilities grew, and many products became standardized and commercialized, while the agency maintained its tried-and-true approach, paying little attention to the evolution of the commercial sector. This presentation introduces GSFC’s new approach at risk classification, which includes classification of components and full spacecraft, as well as of constellations of spacecraft.

risk↗
NASA NTRSDate not supplied

Imbalanced Multi-layer Cloud Classification with Advanced Baseline Imager (ABI) and CloudSat/CALIPSO Data

Clouds at different altitudes play different roles in Earth’s climate. Comprehensive understanding of overlapping clouds is important for climate and weather prediction. The East Pacific region is where El Ni˜no and La Ni˜na originate and where multi-layer clouds frequently occur. The overlap of clouds at different altitudes in this region increases the classification complexity for cloud-based climatological studies. Unlike prior work in cloud layer classification that assumes single layer or two-layer of clouds, in this work, we consider multi-layer cloud classification with 8 cloud-level classes (clear-sky, high, middle, low, high+middle, high+low, middle+low, high+middle+low). We develop and analyze machine learning models on features extracted from satellite images from the East Pacific regions collected by GOES Advanced Baseline Imager (ABI). These are used to classify CloudSat/CALIPSO observed multi-layer clouds. Due to the imbalanced nature of the data, we investigate the adoption of conventional resampling methods, as well as deep learning methods with data augmentation. In our experiments, we utilize the random forest classifier and Multilayer perceptron classifier with data augmentation methods to reduce the class imbalance during training. With these approaches, we achieve a classification accuracy of 83.6% without exploiting any ancillary information.

machine learning↗
DOE OSTI2021

Effect of Image Classification Accuracy on Dasymetric Population Estimation

Dasymetric mapping involves the disaggregation of count data, usually relating to population/demographics, from census enumeration areas to smaller target zones with the aid of an ancillary layer related to population density. The ancillary layer is often a binary classification such as developed versus undeveloped, building versus non-building, and residential versus non-residential, in which one class is treated as populated and the other as unpopulated. While dasymetric mapping relies heavily on ancillary data, little research has been done to address the error in ancillary data and its effects on dasymetric mapping accuracy. This chapter reports our research effort to investigate the effect of image classification accuracy on dasymetric population estimates by developing a binomial classification of buildings from high-resolution remote sensor imagery. The classifier was systematically and iteratively manipulated to generate a series of outputs with variegated accuracy characteristics. Lastly, we generated a corresponding series of population estimates based on the mapped building area from each iteration to investigate the relationship between the accuracy of classification and population estimation.

McKee, Jacob↗
DOE OSTI2023

Time‐Lapse Image Classification Using a Diffractive Neural Network

Diffractive deep neural networks (D 2 NNs), comprised of spatially engineered passive surfaces, collectively process optical input information at the speed of light propagation through a thin diffractive volume, without any external computing power. Diffractive networks were demonstrated to achieve all‐optical object classification and perform universal linear transformations. Herein, a “time‐lapse” image classification scheme using a diffractive network is demonstrated for the first time, significantly advancing its classification accuracy and generalization performance on complex input objects by using the lateral movements of the input objects and/or the diffractive network, relative to each other. In a different context, such relative movements of the objects and/or the camera are routinely being used for image super‐resolution applications; inspired by their success, a time‐lapse diffractive network is designed to benefit from the complementary information content created by controlled or random lateral shifts. The design space and performance limits of time‐lapse diffractive networks are numerically explored, revealing a blind testing accuracy of 62.03% on the optical classification of objects from the CIFAR‐10 dataset. This constitutes the highest inference accuracy achieved so far using a single diffractive network on the CIFAR‐10 dataset. Time‐lapse diffractive networks will be broadly useful for the spatiotemporal analysis of input signals using all‐optical processors.

36 MATERIALS SCIENCE↗
DOE OSTI2020

Camera settings and biome influence the accuracy of citizen science approaches to camera trap image classification

Scientists are increasingly using volunteer efforts of citizen scientists to classify images captured by motion-activated trail cameras. The rising popularity of citizen science reflects its potential to engage the public in conservation science and accelerate processing of the large volume of images generated by trail cameras. While image classification accuracy by citizen scientists can vary across species, the influence of other factors on accuracy is poorly understood. Inaccuracy diminishes the value of citizen science derived data and prompts the need for specific best-practice protocols to decrease error. We compare the accuracy between three programs that use crowdsourced citizen scientists to process images online: Snapshot Serengeti, Wildwatch Kenya, and AmazonCam Tambopata. We hypothesized that habitat type and camera settings would influence accuracy. To evaluate these factors, each photograph was circulated to multiple volunteers. All volunteer classifications were aggregated to a single best answer for each photograph using a plurality algorithm. Subsequently, a subset of these images underwent expert review and were compared to the citizen scientist results. Classification errors were categorized by the nature of the error (e.g., false species or false empty), and reason for the false classification (e.g., misidentification). Our results show that Snapshot Serengeti had the highest accuracy (97.9%), followed by AmazonCam Tambopata (93.5%), then Wildwatch Kenya (83.4%). Error type was influenced by habitat, with false empty images more prevalent in open-grassy habitat (27%) compared to woodlands (10%). For medium to large animal surveys across all habitat types, our results suggest that to significantly improve accuracy in crowdsourced projects, researchers should use a trail camera set up protocol with a burst of three consecutive photographs, a short field of view, and determine camera sensitivity settings based on in situ testing. Accuracy level comparisons such as this study can improve reliability of future citizen science projects, and subsequently encourage the increased use of such data.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2016

Rapid sample classification using an open port sampling interface coupled with liquid introduction atmospheric pressure ionization mass spectrometry

An “Open Access”-like mass spectrometric platform to fully utilize the simplicity of the manual open port sampling interface for rapid characterization of unprocessed samples by liquid introduction atmospheric pressure ionization mass spectrometry has been lacking. The in-house developed integrated software with a simple, small and relatively low-cost mass spectrometry system introduced here fills this void. Software was developed to operate the mass spectrometer, to collect and process mass spectrometric data files, to build a database and to classify samples using such a database. These tasks were accomplished via the vendorprovided software libraries. Sample classification based on spectral comparison utilized the spectral contrast angle method. As a result, using the developed software platform near real-time sample classification is exemplified using a series of commercially available blue ink rollerball pens and vegetable oils. In the case of the inks, full scan positive and negative ion ESI mass spectra were both used for database generation and sample classification. For the vegetable oils, full scan positive ion mode APCI mass spectra were recorded. The overall accuracy of the employed spectral contrast angle statistical model was 95.3% and 98% in case of the inks and oils, respectively, using leave-one-out cross-validation. In conclusion, this work illustrates that an open port sampling interface/mass spectrometer combination, with appropriate instrument control and data processing software, is a viable direct liquid extraction sampling and analysis system suitable for the non-expert user and near real-time sample classification via database matching.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2017

Weakly supervised classification in high energy physics

As machine learning algorithms become increasingly sophisticated to exploit subtle features of the data, they often become more dependent on simulations. Here, this paper presents a new approach called weakly supervised classification in which class proportions are the only input into the machine learning algorithm. Using one of the most challenging binary classification tasks in high energy physics $-$ quark versus gluon tagging $-$ we show that weakly supervised classification can match the performance of fully supervised algorithms. Furthermore, by design, the new algorithm is insensitive to any mis-modeling of discriminating features in the data by the simulation. Weakly supervised classification is a general procedure that can be applied to a wide variety of learning problems to boost performance and robustness when detailed simulations are not reliable or not available.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2019

Precision and accuracy of magnetic resonance imaging for lobar classification of benign prostatic hyperplasia

Purpose: To validate the application of a magnetic resonance imaging (MRI)-based lobar classification of benign prostatic hyperplasia (BPH) for use in research and clinical management. Methods: Two radiologists with 5 and 11 years post-fellowship experience were trained in the lobar classification of BPH using an internally developed atlas of prostate anatomy with example MRI images edited by a third senior radiologist designated as the “administrator” of the study. A study population of 140 patients referred to a tertiary academic medical center with known or suspected prostate cancer was selected by the administrator to test the interrater reliability (IRR; precision) of the classification as well as accuracy of the two readers compared to the administrator as the “gold” standard. The intrarater reliability of repeat readings of the administrator was also examined. Percentage of agreement, proportion of agreement, and Cohen’s κ were applied. This was a retrospective IRB-approved study. Results: IRR (precision) between the two interpreting radiologists was 64% agreement, corresponding to unweighted κ of 0.52. Composite proportion of agreement across all BPH types (categories) for interpreting radiologists was 0.67. Observer accuracy was 62% agreement, unweighted κ 0.49, for observer 1 and 67%, unweighted κ 0.58, for observer 2. Intrarater reliability for the administrator was 87% agreement, unweighted κ 0.81 with composite proportion of agreement across all categories of 0.87. Conclusions: MRI lobar classification of BPH is a reproducible and reliable tool for research and clinical applications.

62 RADIOLOGY AND NUCLEAR MEDICINE↗
DOE OSTI2025

Machine learning models for segmentation and classification of cyanobacterial cells

Abstract Timelapse microscopy has recently been employed to study the metabolism and physiology of cyanobacteria at the single-cell level. However, the identification of individual cells in brightfield images remains a significant challenge. Traditional intensity-based segmentation algorithms perform poorly when identifying individual cells in dense colonies due to a lack of contrast between neighboring cells. Here, we describe a newly developed software package called Cypose which uses machine learning (ML) models to solve two specific tasks: segmentation of individual cyanobacterial cells, and classification of cellular phenotypes. The segmentation models are based on the Cellpose framework, while classification is performed using a convolutional neural network named Cyclass. To our knowledge, these are the first developed ML-based models for cyanobacteria segmentation and classification. When compared to other methods, our segmentation models showed improved performance and were able to segment cells with varied morphological phenotypes, as well as differentiate between live and lysed cells. We also found that our models were robust to imaging artifacts, such as dust and cell debris. Additionally, the classification model was able to identify different cellular phenotypes using only images as input. Together, these models improve cell segmentation accuracy and enable high-throughput analysis of dense cyanobacterial colonies and filamentous cyanobacteria.

Huffine, Clair A.↗