Engineering Papers⌕ Search

SEARCH · Engineering Papers

Results for “TRAJECTORIES”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 217 records · Page 12
All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

High Performance Adaptive Physics Refinement to Enable Large-Scale Tracking of Cancer Cell Trajectory

The ability to track simulated cancer cells through the circulatory system, important for developing a mechanistic understanding of metastatic spread, pushes the limits of today's supercomputers by requiring the simulation of large fluid volumes at cellular-scale resolution. To overcome this challenge, we introduce a new adaptive physics refinement (APR) method that captures cellular-scale interaction across large domains and leverages a hybrid CPU-GPU approach to maximize performance. Through algorithmic advances that integrate multi-physics and multi-resolution models, we establish a finely resolved window with explicitly modeled cells coupled to a coarsely resolved bulk fluid domain. In this work we present multiple validations of the APR framework by comparing against fully resolved fluid-structure interaction methods and employ techniques, such as latency hiding and maximizing memory bandwidth, to effectively utilize heterogeneous node architectures. Collectively, these computational developments and performance optimizations provide a robust and scalable framework to enable system-level simulations of cancer cell transport.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Remembering the Work of Phillip L. Geissler: A Coda to His Scientific Trajectory

Phillip L. Geissler made important contributions to the statistical mechanics of biological polymers, heterogeneous materials, and chemical dynamics in aqueous environments. He devised analytical and computational methods that revealed the underlying organization of complex systems at the frontiers of biology, chemistry, and materials science. In this retrospective we celebrate his work at these frontiers.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2023

Physiological potential and evolutionary trajectories of syntrophic sulfate-reducing bacterial partners of anaerobic methanotrophic archaea

Sulfate-coupled anaerobic oxidation of methane (AOM) is performed by multicellular consortia of anaerobic methanotrophic archaea (ANME) in obligate syntrophic partnership with sulfate-reducing bacteria (SRB). Diverse ANME and SRB clades co-associate but the physiological basis for their adaptation and diversification is not well understood. In this work, we used comparative metagenomics and phylogenetics to investigate the metabolic adaptation among the 4 main syntrophic SRB clades (HotSeep-1, Seep-SRB2, Seep-SRB1a, and Seep-SRB1g) and identified features associated with their syntrophic lifestyle that distinguish them from their non-syntrophic evolutionary neighbors in the phylum Desulfobacterota. We show that the protein complexes involved in direct interspecies electron transfer (DIET) from ANME to the SRB outer membrane are conserved between the syntrophic lineages. In contrast, the proteins involved in electron transfer within the SRB inner membrane differ between clades, indicative of convergent evolution in the adaptation to a syntrophic lifestyle. Our analysis suggests that in most cases, this adaptation likely occurred after the acquisition of the DIET complexes in an ancestral clade and involve horizontal gene transfers within pathways for electron transfer (CbcBA) and biofilm formation (Pel). We also provide evidence for unique adaptations within syntrophic SRB clades, which vary depending on the archaeal partner. Among the most widespread syntrophic SRB, Seep-SRB1a, subclades that specifically partner ANME-2a are missing the cobalamin synthesis pathway, suggestive of nutritional dependency on its partner, while closely related Seep-SRB1a partners of ANME-2c lack nutritional auxotrophies. Our work provides insight into the features associated with DIET-based syntrophy and the adaptation of SRB towards it.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2026

Measuring orbit responses with oscillating trajectories in the Fermilab Linac

Recording changes in beam transverse positions and longitudinal phase reported by Beam Position Monitors (BPMs) in response to a beam deflection by an upstream dipole corrector or RF cavity phase (orbit response) is a powerful tool for analysis of accelerator optics and assisting with machine tuning. In Fermilab Linac, orbit responses were recorded by oscillating the corrector currents and cavity phases in a sinusoidal manner parasitically during regular operation, simultaneously oscillating up to 19 correctors and 7 cavities at distinct frequencies, providing faster, drift-resistant measurements through frequency-domain analysis. This report describes the technique, including error estimations and consistency checks and shows examples of the measurements.

Shemyakin, Alexander [Fermilab] (ORCID:00000001501↗
DOE OSTI2021

Orbit response measurements with oscillating trajectories

Optical properties of components in a linac can be reconstructed from analysis of the orbit response matrix, composed from responses of BPMs to changes in currents of dipole correctors. An efficient way to record such response, discussed in this note, is to excite the corrector current with a sine wave and record its Fourier component of the BPM spectrum. Because of a narrow band of the excitation signal, response to multiple correctors can be recorded at the same time without significantly affecting the signal-to-noise ratio. For that, the correctors are oscillated at different frequencies, and the corresponding BPM Fourier components are recorded. In an ion (non-relativistic) linac, similar measurements can be performed for the longitudinal plane as well. Examples of measurements at the PIP2IT test linac are shown.

43 PARTICLE ACCELERATORS↗
DOE OSTI2020

Radial-offset Optics in EIC Hadron Lattices: Trajectory Lengthening

This Tech. Note describes a method for a radial orbit offset in the arcs of the EIC hadron lattices, based on the perturbation dB/B of the magnetic field of the arc main bend magnets. This can be done independently for each arc (allowing multiple rigidities) and requires the use of pairs of orbit correctors at the extremities of the arc to ensure that the radially shifted orbit is on the zero-orbit (i.e. with the horizontal coordinates x = 0, p x = 0) at the exit and entry point of the respectively upstream and downstream interaction region (IR). The goal is to produce appropriate orbit lengthening as required for time of flight adjustments between the electron and hadron beams as part of EIC operations. An ad hoc parameter is introduced: a “geometric compaction factor” α B = (dC/C)/(dB/B), to quantify the orbit lengthening, or equivalently the radial orbit shift dR = R · α B · dB/B, from bending perturbation. Detailed numerical results are produced and discussed.

43 PARTICLE ACCELERATORS↗