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At least 217 records · Page 12

Simulation of Stark-broadened Hydrogen Balmer-line Shapes for DA White Dwarf Synthetic Spectra

Abstract White dwarfs (WDs) are useful across a wide range of astrophysical contexts. The appropriate interpretation of their spectra relies on the accuracy of WD atmosphere models. One essential ingredient of atmosphere models is the theory used for the broadening of spectral lines. To date, the models have relied on Vidal et al., known as the unified theory of line broadening (VCS). There have since been advancements in the theory; however, the calculations used in model atmosphere codes have only received minor updates. Meanwhile, advances in instrumentation and data have uncovered indications of inaccuracies: spectroscopic temperatures are roughly 10% higher and spectroscopic masses are roughly 0.1 M ⊙ higher than their photometric counterparts. The evidence suggests that VCS-based treatments of line profiles may be at least partly responsible. Gomez et al. developed a simulation-based line-profile code Xenomorph using an improved theoretical treatment that can be used to inform questions around the discrepancy. However, the code required revisions to sufficiently decrease noise for use in model spectra and to make it computationally tractable and physically realistic. In particular, we investigate three additional physical effects that are not captured in the VCS calculations: ion dynamics, higher-order multipole expansion, and an expanded basis set. We also implement a simulation-based approach to occupation probability. The present study limits the scope to the first three hydrogen Balmer transitions (H α , H β , and H γ ). We find that screening effects and occupation probability have the largest effects on the line shapes and will likely have important consequences in stellar synthetic spectra.

79 ASTRONOMY AND ASTROPHYSICS↗

Estimating an airborne dipole source using 3-D wavefield simulations and seismic receivers on the ground

Acoustic signals can couple to the ground, providing an opportunity to use seismic stations to investigate airborne sources. The study of Bishop et al. used wavefield simulations in a fluid-solid medium to quantify the role of topography on the seismic (ground) recordings of a monopole source in the air. We build upon this study by linking wavefield forward modelling with the source estimation code MTUQ, which can accommodate point forces or moment tensors in a solid medium, as well as sources in the air (or water) if they are enabled by the forward-modelling solver. We perform a series of synthetic numerical experiments to demonstrate that a dipole airborne source can be estimated using ground-based receivers, even within the presence of realistic topography. We investigate the influence of receiver coverage, topography, and assumed source location on the estimated results. The established capabilities raise the prospects for future efforts to estimate dipole sources in 3-D models that include heterogeneity in the air and the earth in addition to topography.

58 GEOSCIENCES↗

Progress in Computational Simulation of Earthquakes

GeoFEST(P) is a computer program written for use in the QuakeSim project, which is devoted to development and improvement of means of computational simulation of earthquakes. GeoFEST(P) models interacting earthquake fault systems from the fault-nucleation to the tectonic scale. The development of GeoFEST( P) has involved coupling of two programs: GeoFEST and the Pyramid Adaptive Mesh Refinement Library. GeoFEST is a message-passing-interface-parallel code that utilizes a finite-element technique to simulate evolution of stress, fault slip, and plastic/elastic deformation in realistic materials like those of faulted regions of the crust of the Earth. The products of such simulations are synthetic observable time-dependent surface deformations on time scales from days to decades. Pyramid Adaptive Mesh Refinement Library is a software library that facilitates the generation of computational meshes for solving physical problems. In an application of GeoFEST(P), a computational grid can be dynamically adapted as stress grows on a fault. Simulations on workstations using a few tens of thousands of stress and displacement finite elements can now be expanded to multiple millions of elements with greater than 98-percent scaled efficiency on over many hundreds of parallel processors (see figure).

Donnellan, Andrea↗

FIND: A Synthetic weather generator to control drought Frequency, Intensity, and Duration

Water systems worldwide are experiencing climate change-induced shifts in drought properties like frequency, intensity, and duration, affecting water security and reliability. To develop and test effective drought preparedness plans, researchers often use synthetic weather generators to create hydrological scenarios that explore drought variability beyond historical records. Existing weather generators typically allow users to adjust streamflow statistics like percentiles or temporal correlation but do not directly control drought properties of frequency, intensity, and duration. To fill this gap, we propose FIND (Frequency, INtensity, and Duration) synthetic weather generator. FIND incorporates a standardized drought index to directly and in dependently control drought frequency, intensity, and duration in generated streamflow time series while preserving observed hydrological variability. Use cases for FIND include i) water systems analysis applications that seek to train and test drought strategies under historical and plausible future drought conditions, and ii) bottom-up vulnerability studies relating system vulnerability outcomes to specific changes in drought properties of frequency, intensity, and duration. Here, we demonstrate FIND’s versatility through three experiments: replicating historically observed drought properties, generating streamflow scenarios for multiple sites preserving correlation between their drought conditions, and generating a set of scenarios with direct and independent changes in drought properties. FIND source code is openly available for applications beyond the scope of this paper.

42 ENGINEERING↗

Photometric redshifts from SDSS images with an interpretable deep capsule network

ABSTRACT Studies of cosmology, galaxy evolution, and astronomical transients with current and next-generation wide-field imaging surveys like the Rubin Observatory Legacy Survey of Space and Time are all critically dependent on estimates of photometric redshifts. Capsule networks are a new type of neural network architecture that is better suited for identifying morphological features of the input images than traditional convolutional neural networks. We use a deep capsule network trained on ugriz images, spectroscopic redshifts, and Galaxy Zoo spiral/elliptical classifications of ∼400 000 Sloan Digital Sky Survey galaxies to do photometric redshift estimation. We achieve a photometric redshift prediction accuracy and a fraction of catastrophic outliers that are comparable to or better than current methods for SDSS main galaxy sample-like data sets (r ≤ 17.8 and zspec ≤ 0.4) while requiring less data and fewer trainable parameters. Furthermore, the decision-making of our capsule network is much more easily interpretable as capsules act as a low-dimensional encoding of the image. When the capsules are projected on a two-dimensional manifold, they form a single redshift sequence with the fraction of spirals in a region exhibiting a gradient roughly perpendicular to the redshift sequence. We perturb encodings of real galaxy images in this low-dimensional space to create synthetic galaxy images that demonstrate the image properties (e.g. size, orientation, and surface brightness) encoded by each dimension. We also measure correlations between galaxy properties (e.g. magnitudes, colours, and stellar mass) and each capsule dimension. We publicly release our code, estimated redshifts, and additional catalogues at https://biprateep.github.io/encapZulate-1.

79 ASTRONOMY AND ASTROPHYSICS↗

CRISPR-COPIES: Web Tool

CRISPR/Cas system has emerged as a powerful genome-editing tool for metabolic engineering and human gene therapy. However, the conundrum of where to integrate heterologous genes on the chromosome using the CRISPR/Cas system remains an open question. Selecting a site for gene integration requires incorporation of complex criteria such as factors involved in CRISPR/Cas-mediated integration, genetic stability, and gene expression and therefore, usually requires strenuous characterization of sites on particular or different chromosomal locations. To address these issues, we developed CRISPR-COPIES, a COmputational Pipeline for the Identification of CRISPR/Cas-facilitated intEgration Sites. The tool applies ScaNN, a state-of-the-art model on the embedding-based nearest neighbor search for fast and accurate off-target search and can identify genome-wide intergenic sites for most bacterial and fungal genomes within minutes. This submission contains the code we developed to create a user-friendly web interface for CRISPR-COPIES (https://biofoundry.web.illinois.edu/copies/). We anticipate CRISPR-COPIES will serve as a useful tool for targeted DNA integration and aid in the characterization of synthetic biology toolkits, rapid strain construction to produce valuable biochemicals, and human gene and cell therapy.

Bioinformatics↗

Ultraviolet photometry of globular clusters

Filter photometry measurements of the integrated light from several globular clusters between 1500 and 4000 A are discussed. The techniques and problems associated with carrying out photometry of faint extended sources with the OAO-2 instrumentation are described first. The energy distribution for globular clusters determined from these data are corrected for interstellar extinction on the basis of B-V color excesses and a mean ultraviolet extinction curve. The results are compared with synthetic cluster calculations. The ultraviolet energy distribution is primarily determined by the number of stars at the blue end of the horizontal branch.

Welch, G. A.↗

Synthetic Absorption Lines from Simulations of Multiphase Gas in Galactic Winds

Supernova-driven galactic winds are multiphase streams of gas that are often observed flowing at a range of velocities out of star-forming regions in galaxies. In this study, we use high-resolution 3D simulations of multiphase galactic winds modeled with the hydrodynamics code Cholla to investigate the connection between numerical studies and observations. Using a simulated interaction between a hot $T$ ~ 10 4 K supernova-driven wind and a cool $T$ ~ 10 7 K cloud of interstellar material, we create mock observables, including the optical depth ($\tau$) and covering fraction ($C$ $f$ ) of six commonly observed ions (Si II , C II , Si IV , C IV , N V , and O VI ) as a function of gas velocity. We compare our mock observables to surveys of galactic winds in the literature, finding good agreement with velocities and profiles of the low ions. We then compute "empirical" values for the optical depth and covering fraction following observational techniques and compare them to the values calculated directly from the simulation data. We find that the empirically computed values tend to underestimate the "true" value of $\tau$ for ions with high optical depth and overestimate the "true" value of $\tau$ for ions with low optical depth relative to the simulated data. In conclusion, the empirically estimated covering fractions match our direct calculations very well for the low-ionization ions; for the high-ionization ions, the empirical covering fractions underestimate the directly computed values by up to ~40%.

79 ASTRONOMY AND ASTROPHYSICS↗

Improved Earthquake Source Parameters with 3D Wavespeed Models in California and Nevada

Seismic tomography harnesses earthquake data to explore the inaccessible structure of the Earth. Adjoint waveform tomography (AWT), a method of seismic tomography, updates the tomographic model by optimizing the fit between observed earthquake data and synthetic waveforms. The synthetic data are calculated by solving the wave equation through a given 3D model. An important requirement to calculating synthetics is the source information (location, centroid time, depth, and moment tensor). Errors in source information affect the quality of the synthetics produced, which in turn can limit how structure can be inferred in the AWT workflow. Here, to test the effect of updating source information, we used MTTime (Chiang, 2020), a time-domain full-waveform moment tensor inversion code, to calculate the moment tensors and depths of 118 earthquakes that occurred in California and Nevada over a 20-yr period. We calculated 3D Green’s functions using a 3D seismic wavespeed model of California and Nevada (Doody et al., 2023b). We show that the inverted solutions provide better waveform fits than the Global Centroid Moment Tensor catalog and increase usable, well-correlated data by up to 7%. Therefore, we argue that recalculating source parameters should be considered in AWT workflows, particularly for smaller magnitude events (⁠M w > 5.0).

58 GEOSCIENCES↗

ARPA-E Grid Optimization (GO) Competition Challenge 1

The ARPA-E Grid Optimization (GO) Competition Challenge 1, from 2018 to 2019, focused on the basic Security Constrained AC Optimal Power Flow problem (SCOPF) for a single time period. The Challenge utilized sets of unique datasets generated by the ARPA-E GRID DATA program. Each dataset consisted of a collection of power system network models of different sizes with associated operating scenarios (snapshots in time defining instantaneous power demand, renewable generation, generator and line availability, etc.). The datasets were of two types: Real-Time, which included starting-point information, and Online, which did not. Week-Ahead data is also provided for some cases but was not used in the Competition. Although most datasets were synthetic and generated by GRIDDATA, a few came from industry and were only used in the Final Event. All synthetic Input Data and Team Results for the GO Competition Challenge 1 for the Sandbox, Trial Events 1 to 3, and the Final Event along with problem, format, scoring and rules descriptions are available here. Data for industry scenarios will not be made public. Challenge 1, a minimization problem, required two computational steps. Solver 1 or Code 1 solved the base SCOPF problem under a strict wall clock time limit, as would be the case in industry, and reported the base case operating point as output, which was used to compute the Objective Function value that was used as the scenario score. The feasibility of the solution was provided by the Solver 2 or Code 2, which solves the power flow problem for all contingencies based on the results from Solver 1. This is not normally done in industry, so the time limits were relaxed. In fact, there were no time limits for Trial Event 1. This proved to be a mistake, with some codes running for more than 90 hours, and a time limit of 2 seconds per contingency was imposed for all other events. Entrants were free to use their own Solver 2 or use an open-source version provided by the Competition. Containers, such as Docker, were considered to improve the portability of codes, but none that could reliably support a multi-node parallel computing environment, e.g., MPI, could be found. For more information on the competition and challenge see the "GO Competition Challenge 1 Information" and "GO Competition Challenge 1 Additional Information" resources below.

ACOPF↗

New constraints on warm dark matter from the Lyman- α forest power spectrum

The forest of Lyman-α absorption lines detected in the spectra of distant quasars encodes information on the nature and properties of dark matter and the thermodynamics of diffuse baryonic material. Its main observable—the 1D flux power spectrum (FPS)—should exhibit a suppression on small scales and an enhancement on large scales in warm dark matter (WDM) cosmologies compared to standard Λ⁢CDM. Here, we present an unprecedented suite of 1080 high-resolution cosmological hydrodynamical simulations run with the graphics processing unit-accelerated code cholla to study the evolution of the Lyman-α forest under a wide range of physically motivated gas thermal histories along with different free-streaming lengths of WDM thermal relics in the early Universe. A statistical comparison of synthetic data with the forest FPS measured down to the smallest velocity scales ever probed at redshifts 4.0≲z≲5.2 [E. Boera et al., Revealing reionization with the thermal history of the intergalactic medium: New constraints from the Ly⁢α flux power spectrum, Astrophys. J. 872, 101 (2019)] yields a lower-limit m WDM >3.1 keV (95% C.L.) for the WDM particle mass and constrains the amplitude and spectrum of the photoheating and photoionizing background produced by star-forming galaxies and active galactic nuclei at these redshifts. Interestingly, our Bayesian inference analysis appears to weakly favor WDM models with a peak likelihood value at the thermal relic mass of m WDM =4.5 keV. In conclusion, we find that the suppression of the FPS from free-streaming saturates at k≳0.1 s km -1 because of peculiar velocity smearing, and this saturated suppression combined with a slightly lower gas temperature provides a moderately better fit to the observed small-scale FPS for WDM cosmologies.

79 ASTRONOMY AND ASTROPHYSICS↗

Predictive outlook for experiments resolving prompt vs local redeposition of high- Z materials in tokamaks

High-Z plasma facing components redeposit within the sheath through a combination of two distinct mechanisms: prompt (or geometric-driven) and local (or sheath-driven) redeposition. Experimental efforts are needed to determine the leading-order parameters influencing prompt-vs-local trade-off, which sets the fraction of material entering the scrape-off layer. In preparation for such experiments, leading-order parameters are isolated within the PYEAD-RustBCA-GITR coupled net erosion code using Sobol’ sensitivity analysis. Then, experiments resolving prompt-vs-local trade-off under variation of these leading-order parameters are proposed using an isotopic coupon design with multifaceted diagnostic coverage. The measurability of these experiments is evaluated using synthetic diagnostics.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Validation of the ERO2.0 code using W7-X and JET experiments and predictions for ITER operation

Abstract The paper provides an overview of recent modelling of global material erosion and deposition in the fusion devices Wendelstein 7-X (W7-X), JET and ITER using the Monte-Carlo code ERO2.0. For validating the modelling tool in a three-dimensional environment, W7-X simulations are performed to describe carbon erosion from the graphite test divertor units, which were equipped in operational phase OP 1.2 and analysed post-mortem. Synthetic spectroscopy of carbon line emission is compared with experimental results from the divertor spectrometer measurement system, showing a good agreement in the e-folding lengths in the radial intensity profiles of carbon. In the case of metallic wall materials, earlier modelling of the Be/W environment in JET and ITER is revisited and extended with an updated set of sputtering and reflection data, as well as including the mixing model for describing the Be/W dynamics in the divertor. Motivated by recent H/D/T isotope experiments in JET, limited and diverted configuration pulses are modelled, showing the expected trend of both Be and W erosion increasing with isotope mass. For the JET diverted configuration pulses, it is shown that Be migrates predominantly to the upper part of the inner divertor where it initially leads to strong W erosion. With longer exposure time, the growth of a Be deposited layer leads to a reduction of W erosion in that region. A similar trend is observed in simulations of the ITER baseline Q = 10 scenario, however with a more symmetric Be migration pattern leading to deposition also on the outer divertor.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Assessing Edge Localized Mode (ELM) Mitigation by Pellet Triggering in Smallest-Possible Affordable Robust Compact (SPARC) Low-Collisionality Discharges

Simulations of pellet edge-localized mode (ELM) triggering with the M3D-C1 code confirmed experimentally observed pellet mass thresholds in low-collisionality DIII-D discharges and predicted extremely large thresholds in ITER. The linear (static) and nonlinear (dynamic) workflows developed in this previous work are now applied to the SPARC tokamak. Multiple synthetic equilibria for the high-performance H-mode scenario are tested for MHD stability without pellets using the linear workflow and ELITE simulations; a stable one is identified. Pellets of various mass are injected along an inboard, near-midplane trajectory in the M3D-C1 simulation. No pellet mass threshold for ELM triggering can be found for realistic pellet masses, concluding that fueling from this injection location would not trigger ELMs. A poloidal scan of possible injection locations shows very high thresholds on the high-field side and reasonable thresholds on the low-field-side (LFS). Based on results of this work the location for a LFS injection was finalized in the SPARC design. For this LFS injection the pellet mass threshold is determined using the linear workflow, aligning well with the poloidal scan.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

InSAR Scientific Computing Environment

This computing environment is the next generation of geodetic image processing technology for repeat-pass Interferometric Synthetic Aperture (InSAR) sensors, identified by the community as a needed capability to provide flexibility and extensibility in reducing measurements from radar satellites and aircraft to new geophysical products. This software allows users of interferometric radar data the flexibility to process from Level 0 to Level 4 products using a variety of algorithms and for a range of available sensors. There are many radar satellites in orbit today delivering to the science community data of unprecedented quantity and quality, making possible large-scale studies in climate research, natural hazards, and the Earth's ecosystem. The proposed DESDynI mission, now under consideration by NASA for launch later in this decade, would provide time series and multiimage measurements that permit 4D models of Earth surface processes so that, for example, climate-induced changes over time would become apparent and quantifiable. This advanced data processing technology, applied to a global data set such as from the proposed DESDynI mission, enables a new class of analyses at time and spatial scales unavailable using current approaches. This software implements an accurate, extensible, and modular processing system designed to realize the full potential of InSAR data from future missions such as the proposed DESDynI, existing radar satellite data, as well as data from the NASA UAVSAR (Uninhabited Aerial Vehicle Synthetic Aperture Radar), and other airborne platforms. The processing approach has been re-thought in order to enable multi-scene analysis by adding new algorithms and data interfaces, to permit user-reconfigurable operation and extensibility, and to capitalize on codes already developed by NASA and the science community. The framework incorporates modern programming methods based on recent research, including object-oriented scripts controlling legacy and new codes, abstraction and generalization of the data model for efficient manipulation of objects among modules, and well-designed module interfaces suitable for command- line execution or GUI-programming. The framework is designed to allow users contributions to promote maximum utility and sophistication of the code, creating an open-source community that could extend the framework into the indefinite future.

Rosen, Paul A.↗

Simultaneous Development and Robust Optimization of a Microstructure Dependent Material

Recent microstructure characterization techniques combined with Symbolic Regression(SR)analysis has been proven to generate white box plasticity models well suited for incorporation into FEA software.The current work builds upon those efforts and demonstrates the applicability of Sequential Monte-Carlo (SMC) methods within SR analysis to condense model development and robust optimization into a single, co-dependent process. In this project, SMC methods provide a mechanism through which the observed microstructure features and associated variability can be incorporated into the discovery phase of model development and simultaneously recover approximate parameter distributions through SR analysis. The demonstration utilized a data set consisting of tensile test results from a limited number of sample specimens with corresponding EBSD data from which microstructure features were characterized.The maximum threshold stress model in the Visco-Plastic Self-Consistent (VPSC) code developed by Los Alamos National Laboratories was calibrated using mechanical test data.Synthetic volume elements with statistically equivalent microstructure were generated with DREAM3Dbased on the observed EBSD data. VPSC was used to simulate the corresponding tensile test response for each of the synthetic volume elements. The simulated microstructure and tensile test data was used astraining datafor SMC-SR algorithm and the resulting model was validated with data from the original empirical data set.

Karl Garbrecht↗

The Radar Image Generation (RIG) model

RIG is a modeling system which creates synthetic aperture radar (SAR) and inverse SAR images from 3-D faceted data bases. RIG is based on a physical optics model and includes the effects of multiple reflections. Both conducting and dielectric surfaces can be modeled; each surface is labeled with a material code which is an index into a data base of electromagnetic properties. The inputs to the program include the radar processing parameters, the target orientation, the sensor velocity, and (for inverse SAR) the target angle rates. The current version of RIG can be run on any workstation, however, it is not a real-time model. We are considering several approaches to enable the program to generate realtime radar imagery. In addition to its image generation function, RIG can also generate radar cross-section (RCS) plots as well as range and doppler radar return profiles.

Stenger, Anthony J.↗

Oil Spill Thickness Determination from L-band Synthetic Aperture Radar

Efficient and effective oil spill response requires accurate information regarding slick location, extent, and thickness to direct remediation activities. Of these three, the most challenging to determine is thickness. Ideally, the needed information would be provided by remote sensing instruments, particularly those operating from space. In this study we consider the capability of L-band synthetic aperture radar (SAR) for identifying oil layer thickness for slicks in open water given the range of oil properties and environmental conditions typical in this setting. The goal is to determine layer thickness with precision equivalent to that of the Bonn Agreement Oil Appearance Code. Here we report preliminary results of an ongoing study to determine whether either relative or absolute slick thickness can be determined from L-band SAR. The study has an experimental component, which uses low noise airborne SAR data acquired over slicks to evaluate the capability to determine relative thickness, i.e., to differentiate sheen from zones of varying thicker oil within a slick. The component of the study to evaluate whether absolute thickness can be determined from SAR uses backscatter simulations within a physics- based model of electromagnetic scattering from slicked and unslicked ocean surfaces accounting for oil properties, meteorological conditions, and sea state. As part of the theoretical component of the study, we evaluate the backscatter sensitivity to oil characteristics to determine which properties most influenced the SAR measurements. These results are used to determine whether the oil-to-water ratio or the oil thickness can be quantified with reasonable accuracy based upon SAR backscatter intensities alone or whether it requires calibration to go from relative to absolute thickness. The ratio of the backscatter contrast between clean and slicked ocean surfaces is shown to be sensitive to variations within slicks that well correlate with the oil layer thickness. Determination of absolute thickness is much more challenging given the variation of oil properties as the oil weathers on the sea surface.

Holt, Benjamin↗