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At least 217 records · Page 12

Biophotonic rogue waves in red blood cell suspensions

Rogue waves are ubiquitous in nature, appearing in a variety of physical systems ranging from acoustics, microwave cavities, optical fibers, and resonators to plasmas, superfluids, and Bose–Einstein condensates. Unlike nonlinear solitary waves, rogue waves are extreme events that can occur even without nonlinearity by, for example, spontaneous synchronization of waves with different spatial frequencies in a linear system. Here, we report the observation of rogue-wave-like events in human red blood cell (RBC) suspensions under weak light illumination, characterized by an abnormal L-shaped probability distribution. Such biophotonic extreme events arise mostly due to the constructive interference of Mie-scattered waves from the suspended RBCs, whose biconcave shape and mutable orientation give rise to a time-dependent random phase modulation to an incident laser beam. We numerically simulate the beam propagation through the colloidal suspensions with added disorder in both spatial and temporal domains to mimic random scattering due to Brownian motion. In addition, at high power levels, nonlinear beam self-focusing is also observed, leading to a dual-exponential probability distribution associated with the formation of multiple soliton-like spots. Such rogue wave events should also exist in environments with cells of other species such as swimming bacteria, and understanding of their underlying physics may lead to unexpected biophotonic applications.

59 BASIC BIOLOGICAL SCIENCES↗

Emerging signals of declining forest resilience under climate change

Forest ecosystems depend on their capacity to withstand and recover from natural and anthropogenic perturbations (that is, their resilience). Experimental evidence of sudden increases in tree mortality is raising concerns about variation in forest resilience, yet little is known about how it is evolving in response to climate change. Here we integrate satellite-based vegetation indices with machine learning to show how forest resilience, quantified in terms of critical slowing down indicators, has changed during the period 2000–2020. We show that tropical, arid and temperate forests are experiencing a significant decline in resilience, probably related to increased water limitations and climate variability. By contrast, boreal forests show divergent local patterns with an average increasing trend in resilience, probably benefiting from warming and CO 2 fertilization, which may outweigh the adverse effects of climate change. These patterns emerge consistently in both managed and intact forests, corroborating the existence of common large-scale climate drivers. Reductions in resilience are statistically linked to abrupt declines in forest primary productivity, occurring in response to slow drifting towards a critical resilience threshold. Approximately 23% of intact undisturbed forests, corresponding to 3.32 Pg C of gross primary productivity, have already reached a critical threshold and are experiencing a further degradation in resilience. Together, these signals reveal a widespread decline in the capacity of forests to withstand perturbation that should be accounted for in the design of land-based mitigation and adaptation plans

54 ENVIRONMENTAL SCIENCES↗

Exponential Escape Rate of Filamentary Incubation in Mott Spiking Neurons

Mott materials such as vanadium oxides, when subject to a strong applied voltage, present an inhomogeneous insulator-to-metal transition with formation of metallic filaments within the insulating bulk. This property is enabling the development of compact and power-efficient neuromorphic devices known as Mott neurons. However, the nature of the transition has not been fully understood yet, as it may be attributed to different effects, including Joule self-heating and hot-carrier injection. Moreover, the experimental determination of the threshold voltage needed to induce the transition has proven to be challenging, as the transition becomes increasingly unpredictable when the threshold is approached. The physical understanding of these issues would not only deepen our understanding of Mott insulators, but would also be an important step toward the realization of neuromorphic devices based on such materials. In this work we use numerical simulations based on the Mott resistor network model to study the nature of the filament incubation and formation process. Here, we show that both electronic and thermal effects, in the form of current density focusing and Joule self-heating, respectively, contribute to the filamentary incubation and growth. Remarkably, we find that the percolation of the metallic filaments near the threshold is intrinsically stochastic, qualitatively similar to the familiar Arrhenius activated behavior and to the stochastic firing of biological neurons. More precisely, we characterize the filament percolation as a Poisson point process, which has the same probability distribution as mathematical models of neuronal firing with an exponential escape rate. Finally, we support the numerical simulation results by performing experiments in VO 2 that are in agreement with the exponential escape rate behavior. Thus, we establish a functionality of Mott insulators that opens a path toward implementing neuromorphic hardware with quantum materials.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

An Introduction to Word Embeddings and Language Models

Language models have advanced at a phenomenal pace over the past decade. This document provides a short introduction to terminology, word embeddings (aka low-dimensional representations), and popular large-scale language models (LMs). Word embeddings are used to represent words as numerical vectors and are context-independent, meaning a word can only have a single representation (e.g., club can only be club sandwich, not golf club ). Language models can determine the probability of a given sequence of words occurring in a sentence and can provide context to distinguish between words and phrases that sound similar. LMs are context-dependent (e.g., club can be club sandwich or golf club ) and largely fall in two main classes – autoregressive and autoencoding models. Autoregressive models are pretrained on the classic language modeling task: guess the next token having read all the previous ones. Those models can be fine-tuned and achieve great results on many tasks, the most natural application is text generation. A typical example of such models is GPT, but others include GPT-2, GPT-3, CTLR, TRANSFORMER-XL, REFORMER, XLNET. Autoencoding models are pretrained by corrupting the input tokens in some way and trying to reconstruct the original sentence. They can be fine-tuned and achieve great results on many tasks such as text generation, but their most natural application is sentence classification or token classification. A typical example of such models is BERT, but others include ROBERTA, ALBERT, XML, XML-ROBERTA, FLAUBERT AND LONGFORMER.

97 MATHEMATICS AND COMPUTING↗

Modeling q 95 windows for the suppression of edge localized modes by resonant magnetic perturbations in the DIII-D tokamak

A toroidal asymptotic matching model of the response of a tokamak plasma to a static resonant magnetic perturbation (RMP) is used to simulate the n = 3 RMP-induced edge-localized-mode-suppression windows in q 95 that are evident when the plasma current is slowly ramped in DIII-D discharge #145380. All quantities employed in the simulation are derived from experimental measurements, apart from the neutral particle data. Three cases are considered. In the first case, the natural frequencies of tearing modes resonant in the plasma are determined by the ion flows at the corresponding resonant surfaces, which is the prediction of nonlinear tearing mode theory. In the second case, the natural frequencies are determined by the local E x B velocities at the resonant surfaces. In the third case, the natural frequencies are determined by the electron flows at the resonant surfaces, which is the prediction of linear tearing mode theory. The second case gives the best agreement between the simulations and the experimental observations. The first and third cases only lead to partial agreement between the simulations and the observations. In the first case, the lack of complete agreement may be a consequence of using an inaccurate assumption for the neutral particle distribution in the pedestal. In the third case, the lack of complete agreement is probably due to the fact that the response of a tokamak plasma to an RMP is not accurately described by linear tearing mode theory.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Data assimilation in operator algebras

We develop an algebraic framework for sequential data assimilation of partially observed dynamical systems. In this framework, Bayesian data assimilation is embedded in a nonabelian operator algebra, which provides a representation of observables by multiplication operators and probability densities by density operators (quantum states). In the algebraic approach, the forecast step of data assimilation is represented by a quantum operation induced by the Koopman operator of the dynamical system. Moreover, the analysis step is described by a quantum effect, which generalizes the Bayesian observational update rule. Projecting this formulation to finite-dimensional matrix algebras leads to computational schemes that are i) automatically positivity-preserving and ii) amenable to consistent data-driven approximation using kernel methods for machine learning. Moreover, these methods are natural candidates for implementation on quantum computers. Applications to the Lorenz 96 multiscale system and the El Niño Southern Oscillation in a climate model show promising results in terms of forecast skill and uncertainty quantification.

97 MATHEMATICS AND COMPUTING↗

Scattering using real-time path integrals

Background: Path integrals are a powerful tool for solving problems in quantum theory that are not amenable to a treatment by perturbation theory. Most path integral computations require an analytic continuation to imaginary time. While imaginary time treatments of scattering are possible, imaginary time is not a natural framework for treating scattering problems. More importantly, quantum algorithms for calculating path integrals require real-time evolution. Purpose: Here, we test a recently introduced method for performing direct calculations of scattering observables using real-time path integrals in order to understand the challenges facing real-time path integral calculations of scattering observables. Method: The computations are based on a new interpretation of the path integral as the expectation value of a potential functional on cylinder sets of continuous paths with respect to a complex probability distribution. The method can in principle be applied to arbitrary short-range potentials. Results: The method is applied to compute matrix elements of Møller wave operators applied to narrow wave packets. These are used to calculate half-shell sharp-momentum transition matrix elements for one-dimensional potential scattering. The calculations for half-shell transition operator matrix elements converge to the numerical solution of the Lippmann-Schwinger equation. Conclusions: This work presents a proof in principle that scattering observables can be computed using real-time Feynman path integrals. While the computational method is not efficient, it can be improved. It provides a laboratory for studying quantum computational algorithms that are applicable to scattering problems.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Genetic and Structural Diversity of Prokaryotic Ice-Binding Proteins from the Central Arctic Ocean.

Ice-binding proteins (IBPs) are a group of ecologically and biotechnologically relevant enzymes produced by psychrophilic organisms. Although putative IBPs containing the domain of unknown function (DUF) 3494 have been identified in many taxa of polar microbes, our knowledge of their genetic and structural diversity in natural microbial communities is limited. Here, we used samples from sea ice and sea water collected in the central Arctic Ocean as part of the MOSAiC expedition for metagenome sequencing and the subsequent analyses of metagenome-assembled genomes (MAGs). By linking structurally diverse IBPs to particular environments and potential functions, we reveal that IBP sequences are enriched in interior ice, have diverse genomic contexts and cluster taxonomically. Their diverse protein structures may be a consequence of domain shuffling, leading to variable combinations of protein domains in IBPs and probably reflecting the functional versatility required to thrive in the extreme and variable environment of the central Arctic Ocean.

59 BASIC BIOLOGICAL SCIENCES↗

Rotational excitations in rare-earth nuclei: A comparative study within three cranking models with different mean fields and treatments of pairing correlations

High-spin rotational bands in rare-earth Er (Z = 68), Tm (Z = 69), and Yb (Z = 70) isotopes are investigated by three different nuclear models. These are (i) the cranked relativistic Hartree-Bogoliubov (CRHB) approach with approximate particle number projection by means of the Lipkin-Nogami (LN) method, (ii) the cranking covariant density functional theory (CDFT) with pairing correlations treated by a shell-model-like approach (SLAP) or the so-called particle-number conserving (PNC) method, and (iii) cranked shell model (CSM) based on the Nilsson potential with pairing correlations treated by the PNC method. A detailed comparison between these three models in the description of the ground-state rotational bands of even-even Er and Yb isotopes is performed. The similarities and differences between these models in the description of the moments of inertia, the features of band crossings, and equilibrium deformations and pairing energies of the even-even nuclei under study are discussed. These quantities are considered as a function of rotational frequency and proton and neutron numbers. The changes in the properties of the first band crossings with increasing neutron number in this mass region are investigated. On average, a comparable accuracy of the description of available experimental data is achieved in these models. However, the differences between model predictions become larger above the first band crossings. Because of the time-consuming nature of numerical calculations in the CDFT-based models, a systematic study of the rotational properties of both ground-state and excited-state bands in odd-mass Tm nuclei is carried out only by the PNC-SCM. With few exceptions, the rotational properties of experimental 1-quasiparticle and 3-quasiparticle bands in 165,167,169,171 Tm are reproduced reasonably well. As a result, the appearance of backbendings or upbendings in these nuclei is well understood from the analysis of the variations of the occupation probabilities of the single-particle states and their contributions to total angular momentum alignment with rotational frequency.

150 ≤ A ≤ 189↗

Sampling on NISQ Devices: "Who’s the Fairest One of All?"

Modern NISQ devices are subject to a variety of biases and sources of noise that degrade the solution quality of computations carried out on these devices. A natural question that arises in the NISQ era, is how fairly do these devices sample ground state solutions. To this end, we run five fair sampling problems (each with at least three ground state solutions) that are based both on quantum annealing and, on the Grover Mixer, -QAOA algorithm for gate-based NISQ hardware. In particular, we use seven IBM Q devices, the Aspen-9 Rigetti device, the IonQ device, and three D-Wave quantum annealers. For each of the fair sampling problems, we measure the ground state probability, the relative fairness of the frequency of each ground state solution with respect to the other ground state solutions, and the aggregate error as given by each hardware provider. Overall, our results show that NISQ devices do not achieve fair sampling yet. Furthermore, we also observe differences in the software stack with a particular focus on compilation techniques that illustrate what work will still need to be done to achieve a seamless integration of frontend (i.e., quantum circuit description) and backend compilation.

Computer Science↗

The COMBS Survey - II. Distinguishing the metal-poor bulge from the halo interlopers

The metal-poor stars in the bulge are important relics of the Milky Way’s formation history, as simulations predict that they are some of the oldest stars in the Galaxy. In order to determine if they are truly ancient stars, we must understand their origins. Currently, it is unclear if the metal-poor stars in the bulge ([Fe/H] < -1 dex) are merely halo interlopers, a unique accreted population, part of the boxy/peanut-shaped bulge, or a classical bulge population. In this work, we use spectra from the VLT/FLAMES spectrograph to obtain metallicity estimates using the Ca-II triplet of 473 bulge stars (187 of which have [Fe/H] < -1 dex), targeted using SkyMapper photometry. We also use Gaia DR2 data to infer the Galactic positions and velocities along with orbital properties for 523 stars. We employ a probabilistic orbit analysis and find that about half of our sample has a >50 percent probability of being bound to the bulge, and half are halo interlopers. We also see that the occurrence rate of halo interlopers increases steadily with decreasing metallicity across the full range of our sample (-3 < [Fe/H] < 0.5). Our examination of the kinematics of the confined compared to the unbound stars indicates the metal-poor bulge comprises at least two populations; those confined to the boxy/peanut bulge and halo stars passing through the inner galaxy. We conclude that an orbital analysis approach, as we have employed, is important to understand the composite nature of the metal-poor stars in the inner region.

79 ASTRONOMY AND ASTROPHYSICS↗

Total cost of carbon capture and storage implemented at a regional scale: northeastern and midwestern United States

We model the costs of carbon capture and storage (CCS) in subsurface geological formations for emissions from 138 northeastern and midwestern electricity-generating power plants. The analysis suggests coal-sourced CO 2 emissions can be stored in this region at a cost of $52–$60 ton -1 , whereas the cost to store emission from natural-gas-fired plants ranges from approximately $80 to $90. Storing emissions offshore increases the lowest total costs of CCS to over $60 per ton of CO 2 for coal. Because there apparently is sufficient onshore storage in the northeastern and midwestern United States, offshore storage is not necessary or economical unless there are additional costs or suitability issues associated with the onshore reservoirs. For example, if formation pressures are prohibitive in a large-scale deployment of onshore CCS, or if there is opposition to onshore storage, offshore storage space could probably store emissions at an additional cost of less than $10 ton -1 . Finally, it is likely that more than 8 Gt of total CO 2 emissions from this region can be stored for less $60 ton -1 , slightly more than the $50 ton -1 Section 45Q tax credits incentivizing CCS.

Life Sciences & Biomedicine - Other Topics↗

Alaska's Rural Building Stock: a Validation Study Using ResStock and Field Data

The availability of accurate national data on demographics, building stock, and energy use is vital for modeling residential buildings and evaluating decarbonization strategies. However, rural and Indigenous populations, including those in rural Alaska, are typically underrepresented in these datasets. These communities face unique challenges due to their remote locations, severe weather conditions, and limited access to resources, resulting in high energy burden. This report examines how rural Alaskan communities are underrepresented in the ResStock housing model and highlights the need for improved data to address their unique housing and energy challenges. Thus, this report examines the representation of rural Alaskan communities within the national housing stock model, ResStock. A validation study was conducted, considering ResStock, Field Data and Aerial and 3D-view data collection (A3DDC) datasets. The validation process started by using the down selecting approach on the ResStock building stock dataset. For the purpose of this study, only the rural Alaska Boroughs and Census areas located in ASHRAE IECC Climate Zone 8 were considered to ensure a more accurate and fair comparison with the field data, which was collected in rural areas located in climate zone 8, specifically within the Nome Census area. While ResStock may accurately represent several characteristics of the building stock for rural Alaska, some differences between modeled, field data, and aerial and 3D-view data collection datasets were identified. The following building characteristics have a high impact on modeled energy consumption and demonstrated large differences: Revisit heating setpoints and consider a substantially higher setpoint distribution, it could potentially address "missing loads" if this is the case. Develop and include Toyo heating in future modeling for ResStock and EnergyPlus. Remove natural gas as a water heater fuel type outside of North Slope County. Foundation type updated to have more crawlspaces rather than basements. Infiltration rates need reexamination for a larger distribution toward higher infiltration rates. Include more vinyl and less brick in exterior wall type and revise wall color for greater proportion of light rather than dark color. Roof material revised from majority shingles to majority metal. Update number of occupants to higher number of occupant count. Building orientation represents a higher proportion of south facing buildings rather than relatively equal. The findings suggest that updating ResStock's probability logic could better represent rural Alaskan buildings. ResStock can be utilized to identify the best upgrades or energy efficiency and energy efficiency improvements, helping community leaders in making more informed decisions.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Purpose, Design, and Analysis of the NSTX-U Centerstack Casing Lateral Support Shims

The National Spherical Torus Experiment Upgrade (NSTX-U) centerstack casing surrounds the central magnet core of NSTXU. It provides the inner vacuum boundary of the plasma chamber and supports the radially inboard plasma facing components lining the plasma chamber. The casing is supported like a cantilever, fixed at the lower flange by a connection to the TF Bundle through a G-10 ring. It is flexibly supported at the top by bellows, and insulated shims intended to react the largest part of the inventory of the disruption loads at the upper support, thereby protecting the upper and lower connections from excessive loads. A large part of the qualification of the casing and tiles requires addressing and quantifying disruption loads. These have been estimated based on extensions of the behavior of NSTX during its run period roughly 15 years ago. Structural qualification of the Upgrade used these estimates of the loading as input to calculations to demonstrate adequacy for a “most probable” disruption. The estimates are included in a requirements document to guide conservative design of all components loaded by disruptions. However, the changes made for the upgrade made the extrapolation of disruption behavior uncertain. Disruptions include axisymmetric loading from axisymmetric currents induced in the vessel shells. In addition, more complex currents called Halo currents are a result of plasma poloidal currents impinging on the casing. The halo currents add another layer of uncertain behavior and net lateral loading to the casing. As a result, NSTX-U is equipped with a number of instruments intended to assess the nature and severity of disruptions. The casing shims are required for lateral support of the casing, but these have also been converted to load cells to provide another measure of the magnitude of symmetric and asymmetric loading. Some of the logic in the development of the requirements document are presented. Electromagnetic analysis of axisymmetric and halo loading is described. Global simulations of the casing transient dynamic response, and local analysis and testing of the shim/load cell are included. The shim load cells and other instrumentation will be an important guide in planning NSTX-U experiments beyond its next run period expected in late 2026 or early 2027.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Predicting the Evolution of Shallow Cumulus Clouds With a Lotka‐Volterra Like Model

Abstract In numerical weather prediction and climate models, boundary‐layer clouds are controlled by a wide range of subgrid‐scale processes. However, understanding the nature of these processes and their role in the evolution of the cloud size distribution as a whole has been elusive. To address this issue, we adopt a novel empirical framework from the field of population dynamics to model the evolution of cloud size statistics by using the shallow cumulus properties obtained from a large‐eddy simulation (LES). Our approach involves representing the cloud size distribution and the total cloud area using a revised Lotka‐Volterra model and ridge linear model, respectively. The physical interpretation of the total cloud area and coefficients obtained from the optimization of the models reveals three stages probably interpreted by dominant processes: the formation of new clouds, the growth of single clouds, and a steady state with organized transitions involving the growth and decay of multiple clouds. Furthermore, we showcase the potential of this framework to serve as a component of scale‐aware parameterizations of shallow‐convective clouds in atmospheric models.

54 ENVIRONMENTAL SCIENCES↗

The density distribution and physical origins of intermittency in supersonic, highly magnetized turbulence with diverse modes of driving

The probability density function (PDF) of the logarithmic density contrast, s = ln (ρ/ρ 0 ), with gas density ρ and mean density ρ 0 , for hydrodynamical supersonic turbulence is well known to have significant non-Gaussian (intermittent) features that monotonically increase with the turbulent Mach number, M. By studying the mass- and volume-weighted s-PDF for an ensemble of 36 sub-to-trans-Alfvenic mean-field, supersonic, isothermal turbulence simulations with different modes of driving, relevant to molecular gas in the cool interstellar medium, we show that a more intricate picture emerges for the non-Gaussian nature of s. Using four independent measures of the non-Gaussian components, we find hydrodynamical-like structure in the highly magnetized plasma for M≲4. However, for M≳4, the non-Gaussian signatures disappear, leaving approximately Gaussian s-statistics – exactly the opposite of hydrodynamical turbulence in the high-M limit. We also find that the non-Gaussian components of the PDF increase monotonically with more compressive driving modes. To understand the M≲4 non-Gaussian features, we use one-dimensional pencil beams to explore the dynamics along and across the large-scale magnetic field, B 0 . Here we discuss kinetic, density, and magnetic field fluctuations from the pencil beams, and identify physical sources of non-Gaussian components to the PDF as single, strong shocks coupled to fast magnetosonic compressions that form along B 0 . We discuss the Gaussianization of the M≳4 s-fields through the lens of two phenomenologies: the self-similarity of the s-field and homogenization of the dynamical time-scales between the over- and underdense regions in the compressible gas.

79 ASTRONOMY AND ASTROPHYSICS↗

Environmentally Adaptive, Multiband Software-Defined-Radar for Monitoring of Item of Interest in a Dynamically Cluttered Room

High-resolution multi-frequency radars when networked together, form a robust and seamless monitoring system for high-valued items. The multi-look-direction radar network investigated by LLNL and DSI, operates at 77 GHz and 5.8GHz, and is capable of detection at centimeter resolution movement of objects of interest. This dual frequency radar (unlike optical methods) can operate under various environments with conditions such a smoke, dust, and other natural or manmade obscurations. In addition, the multiband network radar is based on low-cost FCC approved EM specifications and can be scaled with the dimensions of the room and objects under consideration by user-defined inputs. Furthermore, the underlying radar signal processing based on software-defined radar engine is adaptive to its operational environment, where operators can input the size of the facility and object of interest and the distance between the object and radar. Finally, this multi-frequency radar employs a host of change detection and machine learning algorithms to reach performance levels in terms of high probability of detection and low false alarm rates while the monitoring state of the object can be reported remotely.

42 ENGINEERING↗

Pore-resolved investigation of turbulent open channel flow over a randomly packed permeable sediment bed

Pore-resolved direct numerical simulations are performed to investigate the interactions between streamflow turbulence and groundwater flow through a randomly packed porous sediment bed for three permeability Reynolds numbers, Re K = 2.56 , 5.17 and 8.94, representative of natural stream or river systems. Time–space averaging is used to quantify the Reynolds stress, form-induced stress, mean flow and shear penetration depths, and mixing length at the sediment–water interface (SWI). Here, the mean flow and shear penetration depths increase with Re K and are found to be nonlinear functions of non-dimensional permeability. The peaks and significant values of the Reynolds stresses, form-induced stresses, and pressure variations are shown to occur in the top layer of the bed, which is also confirmed by conducting simulations of just the top layer as roughness elements over an impermeable wall. The probability distribution functions (p.d.f.s) of normalized local bed stress are found to collapse for all Reynolds numbers, and their root-mean-square fluctuations are assumed to follow logarithmic correlations. The fluctuations in local bed stress and resultant drag and lift forces on sediment grains are mainly a result of the top layer; their p.d.f.s are symmetric with heavy tails, and can be well represented by a non-Gaussian model fit. The bed stress statistics and the pressure data at the SWI potentially can be used in providing better boundary conditions in modelling of incipient motion and reach-scale transport in the hyporheic zone.

turbulence simulation↗