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At least 217 records · Page 12

Elevation distributed micro-climatology data in a coastal glaciated watershed

Air temperature, ground temperature and relative humidity data were collected in a longitudinal transect of the Nooksack watershed at varying elevations from 500 to 1800 m above sea level. Data were collected by anchoring sensors from trees above winter snow levels and shaded from direct solar radiation. Paired sensors were also buried 3 cm under ground near each air temperature sensor to determine snow absence or presence. Select sites included relative humidity sensors to indicate whether precipitation was occurring. Data were collected every 3-4 h from December 2015 to Sept 2018 (with ongoing collection). Code for analysis of daily mean, minimum, maximum, and temperature change with elevation (lapse rates) are available on Github (https://doi.org/10.5281/zenodo.3239539). The sensor download and intermediate data products are available on HydroShare at (http://www.hydroshare.org/resource/222e832d3df24dea9bae9bbeb6f4219d) with publicly accessible visualization available from the Nooksack Observatory at data.cuahsi.org. Hydrologic models are generally structured with a single annual average lapse rate parameter which assumes a linear temperature gradient with elevation. The daily data (2016-2018) is used as part of ongoing studies on the non-linear dynamics and temporal variability of temperature with elevation to improve assessments of watershed function and salmon habitat.

54 ENVIRONMENTAL SCIENCES↗

Active‐Source Seismic Imaging of Fault Re‐Activation and Leakage: An Injection Experiment at the Mt Terri Rock Laboratory, Switzerland

Abstract We conducted a time‐lapse seismic experiment utilizing automated active seismic source and sensor arrays to monitor a reactivated fault within the Opalinus clay formation at the Mont Terri Rock Laboratory (Switzerland), an analog caprock for geologic carbon storage. A series of six brine injections were conducted into the so‐called Main Fault to reactivate it. Seismic instrumentation in five monitoring boreholes on either side of the fault was used to continuously probe changes in P‐wave travel‐times associated with fault displacement and leakage. We performed time‐lapse travel‐time tomography on five hundred sequential data sets; this revealed a zone of decreased P‐wave velocity, up to 16 m/s, during each injection cycle, followed by a velocity increase during shut‐in. These results demonstrate varying elastic property perturbations, both spatially and temporally, along the fault plane during reactivation. We then interpreted these velocity changes in terms of fault dilation induced by pressurized fluids along the fault.

58 GEOSCIENCES↗

Analysis of land-based CSEM data for CO2 monitoring at Bell Creek, MT

Monitoring subsurface fluid migration is critical to any CO2 injection operation like enhanced oil recovery or carbon storage. The controlled-source electromagnetic (CSEM) method provides a promising low-cost, non-invasive alternative to conventional monitoring methods. To investigate the use of CSEM for monitoring CO2 injection, we are conducting a time-lapse charged well casing CSEM survey at the Bell Creek oil field. There, CO2 is injected into the reservoir for enhanced oil recovery, which also results in incidental carbon storage. From October 2017 to October 2018 we completed three field campaigns, and we plan to complete one more in July 2019. We have analyzed the signal strength and variance of the time-lapse CSEM data. Difference data signal strength well exceeds the standard deviation of the data, and it agrees with estimates of expected signal strength derived from numerical modeling. This analysis indicates that our survey can detect the change in conductivity within the reservoir due to fluid movement.

time-lapse, land CSEM, monitoring, processing↗

The Kimberlina synthetic multiphysics dataset for CO 2 monitoring investigations

Abstract We present a synthetic multi‐scale, multi‐physics dataset constructed from the Kimberlina 1.2 CO 2 reservoir model based on a potential CO 2 storage site in the Southern San Joaquin Basin of California. Among 300 models, one selected reservoir‐simulation scenario produces hydrologic‐state models at the onset and after 20 years of CO 2 injection. Subsequently, these models were transformed into geophysical properties, including P‐ and S‐wave seismic velocities, saturated density where the saturating fluid can be a combination of brine and supercritical CO 2 , and electrical resistivity using established empirical petrophysical relationships. From these 3D distributions of geophysical properties, we have generated synthetic time‐lapse seismic, gravity and electromagnetic responses with acquisition geometries that mimic realistic monitoring surveys and are achievable in actual field situations. We have also created a series of synthetic well logs of CO 2 saturation, acoustic velocity, density and induction resistivity in the injection well and three monitoring wells. These were constructed by combining the low‐frequency trend of the geophysical models with the high‐frequency variations of actual well logs collected at the potential storage site. In addition, to better calibrate our datasets, measurements of permeability and pore connectivity have been made on cores of Vedder Sandstone, which forms the primary reservoir unit. These measurements provide the range of scales in the otherwise synthetic dataset to be as close to a real‐world situation as possible. This dataset consisting of the reservoir models, geophysical models, simulated time‐lapse geophysical responses and well logs forms a multi‐scale, multi‐physics testbed for designing and testing geophysical CO 2 monitoring systems as well as for imaging and characterization algorithms. The suite of numerical models and data have been made publicly available for downloading on the National Energy Technology Laboratory's (NETL) Energy Data Exchange (EDX) website.

58 GEOSCIENCES↗

Pore-scale supercritical CO 2 dissolution and mass transfer under drainage conditions

Abstract: Recently, both core- and pore-scale imbibition experiments have shown non-equilibrium dissolution of supercritical CO 2 (scCO 2 ) and a prolonged depletion of residual scCO 2 . In this study, pore-scale scCO 2 dissolution and mass transfer under drainage conditions were investigated using a two-dimensional heterogeneous micromodel and a novel fluorescent water dye with a sensitive pH range between 3.7 and 6.5. Drainage experiments were conducted at 9 MPa and 40 °C by injecting scCO 2 into the sandstone-analogue pore network initially saturated by water without dissolved CO 2 (dsCO 2 ). During the experiments, time-lapse images of dye intensity, reflecting water pH, were obtained. These images show non-uniform pH in individual pores and pore clusters, with average pH levels gradually decreasing with time. Further analysis on selected pores and pore clusters shows that (1) rate-limited mass transfer prevails with slowly decreasing pH over time when the scCO 2 -water interface area is low with respect to the volume of water-filled pores and pore clusters, (2) fast scCO 2 dissolution and phase equilibrium occurs when scCO 2 bubbles invade into water-filled pores, significantly enhancing the area-to-volume ratio, and (3) a transition from rate-limited to diffusion-limited mass transfer occurs in a single pore when a medium area-to-volume ratio is prevalent. The analysis also shows that two fundamental processes – scCO 2 dissolution at phase interfaces and diffusion of dsCO 2 at the pore scale (10-100 µm) observed after scCO 2 bubble invasion into water-filled pores without pore throat constraints – are relatively fast. The overall slow dissolution of scCO 2 in the millimeter-scale micromodel can be attributed to the small area-to-volume ratios that represent pore-throat configurations and characteristics of phase interfaces. This finding is applicable for the behavior of dissolution at pore, core, and field scales when water-filled pores and pore clusters of varying size are surrounded by scCO 2 at narrow pore throats.

54 ENVIRONMENTAL SCIENCES↗

Fluorescent labelling of intestinal epithelial cells reveals independent long-lived intestinal stem cells in a crypt

Highlights: • Lentivirus mixed with Matrigel enables direct infection of intestinal organoids. • Our original approach allows the marking of a single stem cell in a crypt. • Time-lapse imaging shows the dynamics of a single stem cell. • Our lentivirus transgene system demonstrates plural long-lived stem cells in a crypt. - Abstract: Background and aims: The dynamics of intestinal stem cells are crucial for regulation of intestinal function and maintenance. Although crypt stem cells have been identified in the intestine by genetic marking methods, identification of plural crypt stem cells has not yet been achieved as they are visualised in the same colour. Methods: Intestinal organoids were transferred into Matrigel® mixed with lentivirus encoding mCherry. The dynamics of mCherry-positive cells was analysed using time-lapse imaging, and the localisation of mCherry-positive cells was analysed using 3D immunofluorescence. Results: We established an original method for the introduction of a transgene into an organoid generated from mouse small intestine that resulted in continuous fluorescence of the mCherry protein in a portion of organoid cells. Three-dimensional analysis using confocal microscopy showed a single mCherry-positive cell in an organoid crypt that had been cultured for >1 year, which suggested the presence of long-lived mCherry-positive and -negative stem cells in the same crypt. Moreover, a single mCherry-positive stem cell in a crypt gave rise to both crypt base columnar cells and transit amplifying cells. Each mCherry-positive and -negative cell contributed to the generation of organoids. Conclusions: The use of our original lentiviral transgene system to mark individual organoid crypt stem cells showed that long-lived plural crypt stem cells might independently serve as intestinal epithelial cells, resulting in the formation of a completely functional villus.

60 APPLIED LIFE SCIENCES↗

Live imaging reveals a conserved role of fatty acid β-oxidation in early lymphatic development in zebrafish

Highlights: • Fatty acid β-oxidation (FAO) co-determines lymphatic development in the zebrafish. • Silencing of Cpt1a, key enzyme of FAO, disrupts initiation of lymphangiogenesis. • The importance of FAO for lymphatic development is conserved across species. During embryonic development, lymphatic endothelial cells (LECs) differentiate from venous endothelial cells (VECs), a process that is tightly regulated by several genetic signals. While the aquatic zebrafish model is regularly used for studying lymphangiogenesis and offers the unique advantage of time-lapse video-imaging of lymphatic development, some aspects of lymphatic development in this model differ from those in the mouse. It therefore remained to be determined whether fatty acid β-oxidation (FAO), which we showed to regulate lymphatic formation in the mouse, also co-determines lymphatic development in this aquatic model. Here, we took advantage of the power of the zebrafish embryo model to visualize the earliest steps of lymphatic development through time-lapse video-imaging. By targeting zebrafish isoforms of carnitine palmitoyltransferase 1a (cpt1a), a rate controlling enzyme of FAO, with multiple morpholinos, we demonstrate that reducing CPT1A levels and FAO flux during zebrafish development impairs lymphangiogenic secondary sprouting, the initiation of lymphatic development in the zebrafish trunk, and the formation of the first lymphatic structures. These findings not only show evolutionary conservation of the importance of FAO for lymphatic development, but also suggest a role for FAO in co-regulating the process of VEC-to-LEC differentiation in zebrafish in vivo.

60 APPLIED LIFE SCIENCES↗

Geophysical Monitoring Methods Evaluation for the FutureGen 2.0 Project

A comprehensive monitoring program will be needed in order to assess the effectiveness of carbon sequestration at the FutureGen 2.0 carbon capture and storage (CCS) field-site. Geophysical monitoring methods are sensitive to subsurface changes that result from injection of CO 2 and will be used for: (1) tracking the spatial extent of the free phase CO 2 plume, (2) monitoring advancement of the pressure front, (3) identifying or mapping areas where induced seismicity occurs, and (4) identifying and mapping regions of increased risk for brine or CO 2 leakage from the reservoir. Site-specific suitability and cost effectiveness were evaluated for a number of geophysical monitoring methods including: passive seismic monitoring, reflection seismic imaging, integrated surface deformation, time-lapse gravity, pulsed neutron capture logging, cross-borehole seismic, electrical resistivity tomography, magnetotellurics and controlled source electromagnetics. The results of this evaluation indicate that CO 2 injection monitoring using reflection seismic methods would likely be difficult at the FutureGen 2.0 site. Electrical methods also exhibited low sensitivity to the expected CO 2 saturation changes and would be affected by metallic infrastructure at the field site. Passive seismic, integrated surface deformation, time-lapse gravity, and pulsed neutron capture monitoring were selected for implementation as part of the FutureGen 2.0 storage site monitoring program.

54 ENVIRONMENTAL SCIENCES↗

Landslide monitoring using seismic refraction tomography – The importance of incorporating topographic variations

Seismic refraction tomography provides images of the elastic properties of subsurface materials in landslide settings. Seismic velocities are sensitive to changes in moisture content, which is a triggering factor in the initiation of many landslides. However, the application of the method to long-term monitoring of landslides is rarely used, given the challenges in undertaking repeat surveys and in handling and minimizing the errors arising from processing time-lapse surveys. This work presents a simple method and workflow for producing a reliable time-series of inverted seismic velocity models. This method is tested using data acquired during a recent, novel, long-term seismic refraction monitoring campaign at an active landslide in the UK. Potential sources of error include those arising from inaccurate and inconsistent determination of first-arrival times, inaccurate receiver positioning, and selection of inappropriate inversion starting models. At our site, a comparative analysis of variations in seismic velocity to real-world variations in topography over time shows that topographic error alone can account for changes in seismic velocity of greater than ±10% in a significant proportion (23%) of the data acquired. The seismic velocity variations arising from real material property changes at the near-surface of the landslide, linked to other sources of environmental data, are demonstrated to be of a similar magnitude. Over the monitoring period we observe subtle variations in the bulk seismic velocity of the sliding layer that are demonstrably related to variations in moisture content. This highlights the need to incorporate accurate topographic information for each time-step in the monitoring time-series. The goal of the proposed workflow is to minimize the sources of potential errors, and to preserve the changes observed by real variations in the subsurface. Following the workflow produces spatially comparable, time-lapse velocity cross-sections formulated from disparate, discretely-acquired datasets. These practical steps aim to aid the use of the seismic refraction tomography method for the long-term monitoring of landslides prone to hydrological destabilization.

Whiteley, J. S.↗

Illuminating the geology: Post-injection reservoir characterisation of the CO2CRC Otway site

Proper site characterisation is essential in the planning stages of a CO 2 storage project; but we can also learn a good deal about the reservoir once the injection is underway or has been completed. During CO2CRC Otway Project Stage 2C, sources of valuable information about storage performance have been generated as a consequence of the staged injection of 15,000 t of CO 2 rich gas, as well as observations from time-lapse seismic surveys and well monitoring data. Now that injection has ceased for Stage 2C, the geological model is compared against field observations for the period spanning injection and 23 months after injection ended. The post-injection reservoir characterisation has proven critical to refine the static and dynamic models for future field development and added assurance about the long-term stabilisation of the CO 2 plume. The south-eastern progress of plume development, as seen on the time-lapse seismic data, has led to a review of the structural interpretation and horizon-fault geometry represented in the models. The developing plume has illuminated the extent of splay faults previously unresolved on the baseline seismic data. Saturation profiles interpreted from pulsed-neutron logs at the injection and observation wells show a preference for higher saturations occurring in high permeability distributary channels penetrated by each of the wells. This has reduced the uncertainty in predicting connectivity of this facies between the wells. The pressure data from numerous injection events has been used to refine the characterisation of the average horizontal permeability of the reservoir zone, and the vertical permeability of the intra-formational seal. Furthermore, it has been used to infer near-field bounding conditions of the interior splay fault, which in turn improves our understanding of containment at the site.

58 GEOSCIENCES↗

Seismic monitoring of a small CO 2 injection using a multi-well DAS array: Operations and initial results of Stage 3 of the CO 2 CRC Otway project

Active time-lapse seismic is widely employed for monitoring CO 2 geosequestration due to its ability to track the distribution of fluids in space and time. However, standard 4D seismic monitoring suffers from several challenges, including high cost, disruption to other land uses, and, consequently, relatively large intervals between monitor surveys. Some of these challenges can be mitigated using permanently installed sources and receivers. Such an approach was tested at the CO 2 CRC Otway site by continuous offset VSP monitoring of 15,000 t of supercritical CO 2 injected into an aquifer 1,500 m deep with nine permanent seismic sources (surface orbital vibrators or SOVs) and five downhole fibre-optic receivers. This continuous monitoring is complemented by multi-well 4D VSP using a mobile vibroseis source and the same DAS receivers, which included one baseline and two monitor surveys after injection of 4,000 and 12,000 t of CO 2 . The continuous DAS-SOV monitoring detected an abrupt increase of travel times below the injection interval on the second day of injection (after injection of 300 t of CO 2 ) and tracked the growth of the areal CO 2 plume by mapping changes of reflection amplitudes. The plume is also detected by time-lapse changes of reflection amplitudes in multi-well 4D VSPs. The plume images obtained from continuous offset VSP and 4D VSP are broadly consistent with each other but with some differences due to differences in illumination, lateral variations of velocities and seismic anisotropy. Furthermore, these differences also serve as a measure of uncertainty of 4D VSP images.

4D VSP↗

Sensitivity of geophysical techniques for monitoring secondary CO 2 storage plumes

For geologic carbon storage, the ability to detect secondary CO 2 plumes—defined as those CO 2 plumes accumulating outside the intended storage reservoir—is fundamental to preventing unexpected CO 2 migration into groundwater resources and for risk and liability management. Understanding the sensitivity of various geophysical methods to secondary plumes is crucial for designing cost-effective monitoring schemes. We use several modeling scenarios to demonstrate the process of assessing sensitivities and detection thresholds of three primary geophysical techniques—surface seismic, borehole-to-surface electromagnetic (EM), and surface and borehole gravity—for early detection of secondary CO 2 plumes in the post-injection phase. While seismic reflection methods are often considered in monitoring strategies to track the evolution of CO 2 plumes, they are also the most expensive. Due to cost considerations, especially for long-term post-injection monitoring, other techniques complement seismic monitoring when designing an adaptive monitoring network. Borehole-to-surface EM or surface gravity surveys are feasible for time-lapse monitoring of deep secondary CO 2 plumes. Furthermore, these surveys could be carried at intervals defined by site-specific conditions. If time-lapse EM and/or gravity surveys detect any signal responses beyond the expected change, it would trigger a need for the higher resolution seismic survey.

58 GEOSCIENCES↗

Neutron radiography and X-ray computed tomography for quantifying weathering and water uptake processes inside porous limestone used as building material

Euville and Savonnières limestones were weathered by acid test and this resulted in the formation of a gypsum crust. In order to characterize the crystallization pattern and the evolution of the pore structure below the crust, a combination of high resolution X-ray computed tomography and SEM–EDS was used. A time lapse sequence of the changing pore structure in both stones was obtained and afterwards quantified by using image analysis. The difference in weathering of both stones by the same process could be explained by the underlying microstructure and texture. Because water and moisture play a crucial role in the weathering processes, water uptake in weathered and non-weathered samples was characterized based on neutron radiography. In this way the water uptake was both visualized and quantified in function of the height of the sample and in function of time. In general, the formation of a gypsum crust on limestone slows down the initial water uptake in the materials. - Highlights: • Time lapse sequence in 3D of changing pore structures inside limestone • A combination of X-ray CT, SEM and neutron radiography was used. • Quantification of water content in function of time, height and weathering • Characterization of weathering processes due to gypsum crystallization.

36 MATERIALS SCIENCE↗

Correlation between cationic lipid-based transfection and cell division

We evaluate the temporal relation between protein expression by cationic lipid-mediated transfection and cell division using time lapse fluorescence microscopy. Detailed image analysis provides new insights on the single cell level while simultaneously achieving appropriate statistics. Earlier evidence by less direct methods such as flow cytometry indicates a primary route for transfection involving nuclear envelope breakdown, but also suggests the existence of a pathway independent of mitosis. We confirm and quantify both mechanisms. We found the timing for successful transfection to be unexpectedly flexible, contrary to assertions of a narrow time window. Specifically, cells dividing more than 24 h after exposure to the transfection medium express the probed protein at a comparable level to cells in a mitotic state during or shortly after transfection. This finding can have a profound impact on the guidance and development of non-viral gene delivery materials. - Highlights: • Cationic lipid-based transfection supports protein expression without cell division. • Protein expression is unrelated to cell cycle status at the time of transfection. • Time-lapse imaging provides direct evaluation without statistical averaging. • Lipoplex dissociation is a likely target for improvement of transfection efficiency.

60 APPLIED LIFE SCIENCES↗

Direct Visualization of Catalytically Active Sites at the FeO-Pt(111) Interface

Within the area of surface science, one of the “holy grails” is to directly visualize a chemical reaction at the atomic scale. Whereas this goal has been reached by high-resolution scanning tunneling microscopy (STM) in a number of cases for reactions occurring at flat surfaces, such a direct view is often inhibited for reaction occurring at steps and interfaces. Here we have studied the CO oxidation reaction at the interface between ultrathin FeO islands and a Pt(111) support by in situ STM and density functional theory (DFT) calculations. Time-lapsed STM imaging on this inverse model catalyst in O2 and CO environments revealed catalytic activity occurring at the FeO-Pt(111) interface and directly showed that the Fe-edges host the catalytically most active sites for the CO oxidation reaction. This is an important result since previous evidence for the catalytic activity of the FeO-Pt(111) interface is essentially based on averaging techniques in conjunction with DFT calculations. The presented STM results are in accord with DFTþU calculations, in which we compare possible CO oxidation pathways on oxidized Fe-edges and O-edges. We found that the CO oxidation reaction is more favorable on the oxidized Fe-edges, both thermodynamically and kinetically.

Environmental Molecular Sciences Laboratory↗

Saline pulse test monitoring with the self‐potential method to nonintrusively determine the velocity of the pore water in leaking areas of earth dams and embankments

A method is proposed to localize preferential fluid flow pathways in porous media on the basis of time‐lapse self‐potential measurements associated with salt tracer injection upstream. This method is first tested using laboratory data. A network of nonpolarizing electrodes located is connected to a highly sensitive voltmeter used to record the resulting electrical field fluctuations occurring over time at the surface of the tank. The transport of the conductive salt plume through the permeable porous materials changes the localized streaming potential coupling coefficient associated with the advective drag of the excess charge of the pore water and is also responsible for a diffusion current associated with the salinity gradient. Monitoring of the electrical potential distribution at the ground surface can be used to localize the pulse of saline water over time and to determine its velocity. This method applies in real time and can be used to track highly localized flow pathways characterized by high permeability. Our sandbox experiment demonstrates the applicability of this new method under well‐controlled conditions with a coarse‐sand channel embedded between fine‐sand banks. A finite element model allows us to reproduce the time‐lapse electrical potential distribution over the channel, but some discrepancies were observed on the banks. Finally, we performed a numerical simulation for a synthetic case study inspired by a recently published field case study. A Markov chain Monte Carlo sampler is used to determine the permeability and the porosity of the preferential fluid flow pathway of this synthetic case study.

54 ENVIRONMENTAL SCIENCES↗

The Seismic Response to Injected Carbon Dioxide: Comparing Observations to Estimates Based Upon Fluid Flow Modeling

Time-lapse seismic amplitude differences and travel time shifts, obtained while monitoring enhanced oil recovery at Cranfield, Mississippi, reveal coherent changes that are associated with the injection of carbon dioxide. Rock physics modeling highlights the importance of the oil, brine, and gas content of pore fluids prior to the injection of carbon dioxide. For example, compressional velocity changes due to the injection of carbon dioxide can drop from 300 m/s to less than 100 m/s as the percentage of oil increases from 1% to 50%. Predictions based upon a new technique for modeling wave propagation in a poroelastic medium containing an arbitrary number of fluids, coupled with multicomponent numerical reservoir modeling at Cranfield, reproduce the general pattern of observed seismic amplitude changes and travel time shifts. In particular, time-lapse amplitude changes suggest a significant and widespread lowering of compressional velocities due to the injection of CO 2 into an aquifer bounding the oil rim of the reservoir. It appears that the large-scale variations in preexisting pore fluid content have a major influence on seismic velocity changes, even in the highly heterogeneous reservoir at Cranfield.

58 GEOSCIENCES↗

Changes in Physical Properties of Everglades Peat Soils Induced by Increased Salinity at the Laboratory Scale: Implications for Changes in Biogenic Gas Dynamics

Abstract Saltwater intrusion due to sea level rise is a major concern for the Florida Everglades because it may induce shifts in ecosystem productivity and physical soil properties. However, the effects of saline water intrusion into the current carbon gas dynamics of the Everglades (particularly in terms of biogenic gas production and emissions, i.e., CH 4 and CO 2 ) are still uncertain. In this work, we present a laboratory‐based study to simulate how sea level rise may alter the physical properties (i.e., hydraulic conductivity) of peat soils from the Everglades and consequently affect the accumulation and release of biogenic gases within the peat matrix. Peat monoliths collected from the Everglades were subjected to progressive increases in salinity from a NaCl solution, and changes to the biogenic gas dynamics regime were simultaneously monitored using a combination of time‐lapse ground‐penetrating radar measurements, manometers, time‐lapse photography, and gas traps. Physical changes to the peat matrix at each salinity interval were assessed using constant head permeameter tests. Consistent with previous research, results show that a progressive increase in salinity (from fresh to saltwater) results in (1) a progressive increase in hydraulic conductivity and (2) a progressive decrease in gas content within the peat matrix (i.e., production) and gas releases. This work has implications for better understanding the potential effects of saltwater intrusion into freshwater peatland systems in the Everglades, particularly in terms of carbon gas dynamics.

Sirianni, Matthew J.↗