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At least 217 records · Page 12

Attosecond Streaking Time Delays: Finite-Range Interpretation and Applications

We review theoretical studies of the attosecond streaking time delay concept in photoionization via the investigation of the electron dynamics in the streaking field after the transition of the photoelectron into the continuum upon absorption of an extreme ultraviolet photon. Based on the results, a so-called finite range interpretation was introduced, which highlighted that the delay is accumulated until the streaking pulse ends and, hence, over a finite range of the potential of the parent ion. Following a discussion of the analysis leading to this interpretation, we summarize a few applications which provide insights into different aspects of the streaking time delay concept in photoionization. Besides a review of previously presented results, we give an analysis of the relevance of the first half-cycle of the streaking field and an outlook regarding the perspective of using the streaking method to resolve dynamical changes in the potential that the photoelectron explores during its propagation in the continuum.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Interpreting Mobile and Handheld Air Sensor Readings in Relation to Air Quality Standards and Health Effect Reference Values: Tackling the Challenges

The US Environmental Protection Agency (EPA) and other federal agencies face a number of challenges in interpreting and reconciling short-duration (seconds to minutes) readings from mobile and handheld air sensors with the longer duration averages (hours to days) associated with the National Ambient Air Quality Standards (NAAQS) for the criteria pollutants-particulate matter (PM), ozone, carbon monoxide, lead, nitrogen oxides, and sulfur oxides. Similar issues are equally relevant to the hazardous air pollutants (HAPs) where chemical-specific health effect reference values are the best indicators of exposure limits; values which are often based on a lifetime of continuous exposure. A multi-agency, staff-level Air Sensors Health Group (ASHG) was convened in 2013. ASHG represents a multi-institutional collaboration of Federal agencies devoted to discovery and discussion of sensor technologies, interpretation of sensor data, defining the state of sensor-related science across each institution, and provides consultation on how sensors might effectively be used to meet a wide range of research and decision support needs. ASHG focuses on several fronts: improving the understanding of what hand-held sensor technologies may be able to deliver; communicating what hand-held sensor readings can provide to a number of audiences; the challenges of how to integrate data generated by multiple entities using new and unproven technologies; and defining best practices in communicating health-related messages to various audiences. This review summarizes the challenges, successes, and promising tools of those initial ASHG efforts and Federal agency progress on crafting similar products for use with other NAAQS pollutants and the HAPs.

54 ENVIRONMENTAL SCIENCES↗

Caution Is Required in Interpretation of Mutations in the Voltage Sensing Domain of Voltage Gated Channels as Evidence for Gating Mechanisms

The gating mechanism of voltage sensitive ion channels is generally considered to be the motion of the S4 transmembrane segment of the voltage sensing domains (VSD). The primary supporting evidence came from R→C mutations on the S4 transmembrane segment of the VSD, followed by reaction with a methanethiosulfonate (MTS) reagent. The cys side chain is –SH (reactive form –S−); the arginine side chain is much larger, leaving space big enough to accommodate the MTS sulfonate head group. The cavity created by the mutation has space for up to seven more water molecules than were present in wild type, which could be displaced irreversibly by the MTS reagent. Our quantum calculations show there is major reorientation of three aromatic residues that face into the cavity in response to proton displacement within the VSD. Two phenylalanines reorient sufficiently to shield/unshield the cysteine from the intracellular and extracellular ends, depending on the proton positions, and a tyrosine forms a hydrogen bond to the cysteine sulfur with its side chain –OH. These could produce the results of the experiments that have been interpreted as evidence for physical motion of the S4 segment, without physical motion of the S4 backbone. The computations strongly suggest that the interpretation of cysteine substitution reaction experiments be re-examined in the light of these considerations.

Biochemistry & Molecular Biology↗

Structural Interpretation of the Large Slowdown of Water Dynamics at Stacked Phospholipid Membranes for Decreasing Hydration Level: All-Atom Molecular Dynamics

Hydration water determines the stability and function of phospholipid membranes as well as the interaction of membranes with other molecules. Experiments and simulations have shown that water dynamics slows down dramatically as the hydration decreases, suggesting that the interfacial water that dominates the average dynamics at low hydration is slower than water away from the membrane. Here, based on all-atom molecular dynamics simulations, we provide an interpretation of the slowdown of interfacial water in terms of the structure and dynamics of water–water and water–lipid hydrogen bonds (HBs). We calculate the rotational and translational slowdown of the dynamics of water confined in stacked phospholipid membranes at different levels of hydration, from completely hydrated to poorly hydrated membranes. For all hydrations, we analyze the distribution of HBs and find that water–lipids HBs last longer than water–water HBs and that at low hydration most of the water is in the interior of the membrane. We also show that water–water HBs become more persistent as the hydration is lowered. We attribute this effect (i) to HBs between water molecules that form, in turn, persistent HBs with lipids; (ii) to the hindering of the H-bonding switching between water molecules due to the lower water density at the interface; and (iii) to the higher probability of water–lipid HBs as the hydration decreases. Lastly, our interpretation of the large dynamic slowdown in water under dehydration is potentially relevant in understanding membrane biophysics at different hydration levels.

36 MATERIALS SCIENCE↗

Prediction of Long-Term Geochemical Change in Bentonite Based on the Interpretative THMC Model of the FEBEX In Situ Test

Since nuclear energy is crucial in the decarbonization of the energy supply, one hurdle to remove is the handling of high-level radioactive waste (HLW). Disposal of HLW in a deep geological repository has long been deemed a viable permanent option. In the design of a deep geological repository, compacted bentonite is the most commonly proposed buffer material. Predicting the long-term chemical evolution in bentonite, which is important for the safety assessment of a repository, has been challenging because of the complex coupled processes. Models for large-scale tests and predictions based on such models have been some of the best practices for such purposes. An 18-year-long in situ test with two dismantling events provided a unique set of chemical data that allowed for studying chemical changes in bentonite. In this paper, we first developed coupled thermal, hydrological, mechanical, and chemical (THMC) models to interpret the geochemical data collected in the in situ test and then extended the THMC model to 200 years to make long-term prediction of the geochemical evolution of bentonite. The interpretive coupled THMC model shows that the geochemical profiles were strongly affected by THM processes such as evaporation/condensation, porosity change caused by swelling, permeability change, and the shape of concentration profiles for major cations were largely controlled by transport processes, but concentration levels were regulated by chemical reactions, and the profiles of some species such as pH, bicarbonate, and sulfate were dominated by these reactions. The long-term THMC model showed that heating prolongs the time that bentonite becomes fully saturated in the area close to the heater/canister; however, once the bentonite becomes fully saturated, high concentrations of ions in bentonite near the heater, which was observed in the field test, will disappear; illitization continues for 50 years but will not proceed further.

Zheng, Liange↗

The Structural Characterisation and DFT-Aided Interpretation of Vibrational Spectra for Cyclo(l-Cys-d-Cys) Cyclic Dipeptide in a Solid State

Cyclic dipeptides with two intramolecular peptide bonds forming a six-membered 2,5-diketopiperazine ring are gaining significant attention due to their biological and chemical properties. Small changes in the local geometry of such molecules (from cis to trans) can lead to significant structural differences. This work presents the results of a study of cyclo(l-Cys-d-Cys), a dipeptide comprising two cysteine molecules in opposite chiral configurations, with the functional groups situated at both sides of the diketopiperazine ring. X-ray diffraction (XRD) experiment revealed that the molecule crystallises in the $P$-1 space group, which includes the centre of inversion. The IR and Raman vibrational spectra of the molecule were acquired and interpreted in terms of the potential energy distribution (PED) according to the results of density functional theory (DFT) calculations. The DFT-assisted analysis of energy frameworks for the hydrogen bond network within molecular crystals was performed to support the interpretation of X-ray structural data. The optimisation of the computational model based on three-molecule geometry sections from the crystallographic structure, selected to appropriately reflect the intermolecular interactions responsible for the formation of 1D molecular tapes in cyclo(l-Cys-d-Cys) crystal, allowed for better correspondence between theoretical and experimental vibrational spectra. This work can be considered the first complete structural characterisation of cyclo(l-Cys-d-Cys), complemented via vibrational spectroscopy results with full band assignment aided with the use of the DFT method.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

3FGL demographics outside the galactic plane using supervised machine learning: pulsar and dark matter subhalo interpretations

Nearly one-third of the sources listed in the Third Fermi Large Area Telescope (LAT) catalog (3FGL) remain unassociated. It is possible that predicted and even unanticipated gamma-ray source classes are present in these data waiting to be discovered. Taking advantage of the excellent spectral capabilities achieved by the Fermi LAT, we use machine-learning classifiers (Random Forest and XGBoost) to pinpoint potentially novel source classes in the unassociated 3FGL sample outside the Galactic plane. Here we report a total of 34 high-confidence Galactic candidates at |b|⩾5{sup ∘}. The currently favored standard astrophysical interpretations for these objects are pulsars or low-luminosity globular clusters hosting millisecond pulsars (MSPs). Yet these objects could also be interpreted as dark matter annihilation taking place in ultra-faint dwarf galaxies or dark matter subhalos. Unfortunately, Fermi LAT spectra are not sufficient to break degeneracies between the different scenarios. Careful visual inspection of archival optical images reveals no obvious evidence for low-luminosity globular clusters or ultra-faint dwarf galaxies inside the 95% error ellipses. If these are pulsars, this would bring the total number of MSPs at |b|⩾5{sup ∘} to 106, down to an energy flux ≈4.0 × 10{sup −12} erg cm{sup −2} s{sup −1} between 100 MeV and 100 GeV. We find this number to be in excellent agreement with predictions from a new population synthesis of MSPs that predicts 100–126 high-latitude 3FGL MSPs depending on the choice of high-energy emission model. If, however, these are dark matter substructures, we can place upper limits on the number of Galactic subhalos surviving today and on dark matter annihilation cross sections. These limits are beginning to approach the canonical thermal relic cross section for dark matter particle masses below ∼100 GeV in the bottom quark (b b-bar ) annihilation channel.

79 ASTRONOMY AND ASTROPHYSICS↗

The impact of non-uniform thermal structure on the interpretation of exoplanet emission spectra

The determination of atmospheric structure and molecular abundances of planetary atmospheres via spectroscopy involves direct comparisons between models and data. While varying in sophistication, most model spectra comparisons fundamentally assume one-dimensional (1D) model physics. However, knowledge from general circulation models and of solar system planets suggests that planetary atmospheres are inherently three-dimensional in their structure and composition. We explore the potential biases resulting from standard “1D” assumptions within a Bayesian atmospheric retrieval framework. Specifically, we show how the assumption of a single 1D thermal profile can bias our interpretation of the thermal emission spectrum of a hot Jupiter atmosphere that is composed of two thermal profiles. We retrieve spectra of unresolved model planets as observed with a combination of the Hubble Space Telescope Wide Field Camera 3 (WFC3)+Spitzer Infrared Array Camera (IRAC) as well as the James Webb Space Telescope (JWST) under varying differences in the two thermal profiles. For WFC3+IRAC, there is a significantly biased estimate of CH{sub 4} abundance using a 1D model when the contrast is 80%. For JWST, two thermal profiles are required to adequately interpret the data and estimate the abundances when contrast is greater than 40%. We also apply this preliminary concept to the recent WFC3+IRAC phase curve data of the hot Jupiter WASP-43b. We see similar behavior as present in our simulated data: while the H{sub 2}O abundance determination is robust, CH{sub 4} is artificially well-constrained to incorrect values under the 1D assumption. Our work demonstrates the need to evaluate model assumptions in order to extract meaningful constraints from atmospheric spectra and motivates exploration of optimal observational setups.

79 ASTRONOMY AND ASTROPHYSICS↗

Transient Cosmic-ray Events beyond the Heliopause: Interpreting Voyager-1 Observations

In 2013 March and 2014 May, Voyager-1 ( V1 ) experienced small but significant increases in the flux of galactic cosmic rays (GCRs) in the hundred MeV/n range. Additionally, V1 also saw episodic depletion of GCR flux around perpendicular pitch angles. We discuss the pitch-angle distribution and the time profiles of these events. In a previous paper, we interpreted the 2013 “bump” as the GCRs remotely sensing a shock that reached the magnetic field line passing through V1 : particles gained energy as they were reflected on the approaching region of the stronger magnetic field of the disturbance. Here, we point out that energy gain is not restricted to reflected particles—GCRs passing through the disturbance also gain energy. The effect should be present in a broad range of pitch angles with the maximum increase of GCR intensity predicted to occur at the critical reflection angle. In this paper, the shock is not step-like, but a gradual increase of the magnetic field strength, B , taking a few days, in agreement with V1 measurements. This smoothens the profile of the predicted bump in the GCR flux. We also address the linear episodic decreases seen around perpendicular pitch angles. These events are interpreted in terms of adiabatic cooling behind the shock due to the slow weakening of B . We present simple numerical model calculations and find that a gradual shock followed by a slow decrease of B , as observed, may account for both the episodic increases and the anisotropic depletion of GCR fluxes.

79 ASTRONOMY AND ASTROPHYSICS↗

Effects of Subhalos on Interpreting Highly Magnified Sources Near Lensing Caustics

Large magnification factors near gravitational lensing caustics of galaxy-cluster lenses allow the study of individual stars or compact stellar associations at cosmological distances. We study how the presence of sub-galactic subhalos, an inevitable consequence of cold dark matter, can alter the property of caustics and hence change the interpretation of highly magnified sources that lie atop them. First, we consider a galaxy-cluster halo populated with subhalos sampled from a realistic subhalo mass function calibrated to N-body simulations. Then, we compare a semianalytical approximation and an adaptive ray-shooting method that we employ to quantify the property of the caustics. As a case study, we investigate Earendel, a z = 6.2 candidate of magnified single- or multiple-star system with a lone lensed image atop the critical curve in the Sunrise Arc. We find that the source size constraint (≲0.3 pc) previously derived from macrolens models should be relaxed by a factor of a few to 10 when subhalos are accounted for, therefore allowing the possibility of a compact star cluster. The subhalos could introduce an astrometric perturbation that is ≲0$^{"}_{.}$5, which does not contradict observation. These conclusions are largely robust to changes in the subhalo population. Subhalos therefore should be seriously accounted for when interpreting the astrophysical nature of similar highly magnified sources uncovered in recent high-z observations.

Caustic curve↗

Interpreting space-based trends in carbon monoxide with multiple models

Here, we use a series of chemical transport model and chemistry climate model simulations to investigate the observed negative trends in MOPITT CO over several regions of the world, and to examine the consistency of time-dependent emission inventories with observations. We also found that simulations driven by the MACCity inventory, used for the Chemistry Climate Modeling Initiative (CCMI), reproduce the negative trends in the CO column observed by MOPITT for 2000–2010 over the eastern United States and Europe. However, the simulations have positive trends over eastern China, in contrast to the negative trends observed by MOPITT. The model bias in CO, after applying MOPITT averaging kernels, contributes to the model–observation discrepancy in the trend over eastern China. This demonstrates that biases in a model's average concentrations can influence the interpretation of the temporal trend compared to satellite observations. The total ozone column plays a role in determining the simulated tropospheric CO trends. A large positive anomaly in the simulated total ozone column in 2010 leads to a negative anomaly in OH and hence a positive anomaly in CO, contributing to the positive trend in simulated CO. Our results demonstrate that accurately simulating variability in the ozone column is important for simulating and interpreting trends in CO.

54 ENVIRONMENTAL SCIENCES↗

AttentionFire_v1.0: interpretable machine learning fire model for burned-area predictions over tropics

Abstract. African and South American (ASA) wildfires account for more than 70 % of global burned areas and have strong connection to local climate for sub-seasonal to seasonal wildfire dynamics. However, representation of the wildfire–climate relationship remains challenging due to spatiotemporally heterogenous responses of wildfires to climate variability and human influences. Here, we developed an interpretable machine learning (ML) fire model (AttentionFire_v1.0) to resolve the complex controls of climate and human activities on burned areas and to better predict burned areas over ASA regions. Our ML fire model substantially improved predictability of burned areas for both spatial and temporal dynamics compared with five commonly used machine learning models. More importantly, the model revealed strong time-lagged control from climate wetness on the burned areas. The model also predicted that, under a high-emission future climate scenario, the recently observed declines in burned area will reverse in South America in the near future due to climate changes. Our study provides a reliable and interpretable fire model and highlights the importance of lagged wildfire–climate relationships in historical and future predictions.

58 GEOSCIENCES↗

Evolution, Current State of the Art, and Interpretation of Aircraft-Based Methane Emission Quantification at the Natural Gas Basin-Level

Accurately quantifying methane (CH4) emissions from the oil and gas (O&G) industry is challenging given the existence of many potential emission sources, differences in industry practices and regulations, and often incomplete or out-of-date activity data. It is thus important to regularly assess emission inventories and support improvements by deriving independent estimates using state-of-the-science approaches. Recent research has provided CH4 emission estimates from the O&G supply chains based on different measurement techniques at multiple spatio-temporal scales. Natural gas basin-scale aircraft-based atmospheric measurements indicate greater CH4 emissions than emission inventories based on up-scaling of component-/facility-level emission measurements from a relatively small sample size. Here we present results from a coordinated field study that compares concurrent CH4 emission measurements using different techniques and scales to better understand the strengths and weaknesses of each approach, with a focus on the aircraft-based estimation method. We describe the importance of (i) decades of measurement technology development, (ii) experience in designing measurement sampling strategies and aligning system boundaries, and (Hi) properly interpreting CH4 emission estimates for successfully reconciling aircraft-based measurements with emission inventories and for identifying CH4 emission mitigation potential. We illustrate that aircraft-based top-down estimates represent a brief snapshot of total basin-level CH4 emissions. Thus, a high spatio-temporally resolved bottom-up emission inventory is needed to identify key CH4 sources (including episodic sources) at the process level. While this paper provides a brief overview of the overall study design and findings, its focus is on the implementation of the aircraft measurements and its interpretation and results. A separate paper describes in more detail the overall organizational structure of the study as well as the study implications from an industry perspective.

03 NATURAL GAS↗

An Interpretable Index of Social Vulnerability to Environmental Hazards

Index-based measures of social vulnerability to environmental hazards are commonly modeled from composites of population-level risk factors. These models overlook individual context in communities' experiences of environmental hazards, producing metrics that may hinder spatial decision support for mitigating and responding to hazards. This paper introduces an interpretable, high-resolution model for generating an individual-oriented social vulnerability index (IOSVI) for the United States built on synthetic populations that couples individual and social determinants of vulnerability. The IOSVI combines an individual vulnerability index (IVI) that ranks individuals in an area’s synthetic population based on intersecting risk factors, with a social vulnerability index (SVI) based on the population’s cumulative distribution of IVI scores. Interpretability of the IOSVI procedure is demonstrated through examples of national, metropolitan, and neighborhood (census tract) level spatial variation in index scores and IVI themes, as well as an exploratory analysis examining risk factors affecting a specific sub-population (military veterans) in areas of high social and environmental vulnerability.

Tuccillo, Joe↗

MicroBooNE investigations on the photon interpretation of the MiniBooNE low energy excess

The MicroBooNE experiment is a liquid argon time projection chamber with 85-ton active volume at Fermilab, operated from 2015 to 2020 to collect neutrino data from Fermilab's Booster Neutrino Beam. One of MicroBooNE's physics goals is to investigate possible explanations of the low-energy excess observed by the MiniBooNE experiment in $\nu_{\mu}\rightarrow \nu_{e}$ neutrino oscillation measurements. MicroBooNE has performed searches to test hypothetical interpretations of the MiniBooNE low-energy excess, including the underestimation of the photon background or instrinic $\nu_{e}$ background. This thesis presents MicroBooNE's searches for two neutral current (NC) single-photon production processes that contribute to the photon background of the MiniBooNE measurement: NC $\Delta$ resonance production followed by $\Delta$ radiative decay: $\Delta \rightarrow N\gamma$, and NC coherent single-photon production. Both searches take advantage of boosted decision trees to yield efficient background rejection, and a high-statistic NC $\pi^0$ measurement to constrain dominant background, and make use of MicroBooNE's first three years of data. The NC $\Delta \rightarrow N\gamma$ measurement yielded a bound on the $\Delta$ radiative decay process at 2.3 times the predicted nominal rate at 90\% confidence level(C.L.), disfavoring a candidate photon interpretation of the MiniBooNE low-energy excess as a factor of 3.18 times the nominal NC Δ radiative decay rate at the 94.8\% C.L. The NC coherent single photon measurement leads to the world's first experimental limit on the cross-section of this process below 1 GeV, of $1.49 \times 10^{-41} \text{cm}^2$ at 90\% C.L., corresponding to 24.0 times the nominal prediction.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Nonparametric Multiparticle Set Methods for Interpreting Environmental Samples

Collection and analysis of environmental samples is commonly used by a range of stakeholders in nuclear safeguards and security contexts. While the ubiquity of samples and their transport in the environment allow regular collection, developing and demonstrating methods for analyzing these samples is difficult. In this work, an environmental sample consists of a set of one or more individual particles. Recent advances in reactor simulation have allowed us to generate data that are more representative of real-world environmental samples, enabling statistically defensible method development and testing. The most notable of these advances is a drastic increase in the number of material depletion regions, which allows our simulations to capture the variation in isotopic composition seen at length scales consistent with environmental samples. Traditional approaches for handling multiparticle samples treat each particle in the sample individually, estimating the quantity of interest (e.g., core-average burnup) resulting from measurement and analysis of signatures (e.g., nuclide assays) from each individual particle. Individual estimates are then averaged to generate a single estimate of the quantity of interest over the entire sample. In this presentation, we introduce two novel approaches for interpreting environmental samples that comprise of multiple particles: (1) the Quantile-Quantile Comparator, which uses a multivariate generalization of quantile-quantile plots for comparing unknown statistical distributions, and (2) the Set Transformer, an attention-based neural network module designed to model interactions among elements (particles) in the input set (sample). Statistically representative sampling cannot be guaranteed as samples are passively collected and are beholden to what particles are available in the environment. These new analysis methods for set-input problems are expected to be more robust than traditional approaches to issues of sampling bias where particles are not uniformly distributed throughout regions of interest, as well as generally outperform traditional approaches by jointly considering all elements in the set. We will present results comparing the performance of traditional single particle approaches and the novel Quantile-Quantile Comparator and Set Transformer for interpretation of simulated environmental samples.

Phathanapirom, Birdy↗

A multiscale design method using interpretable machine learning for phononic materials with closely interacting scales

Manipulating the dispersive characteristics of vibrational waves is beneficial for many applications, e.g., high-precision instruments. architected hierarchical phononic materials have sparked promise tunability of elastodynamic waves and vibrations over multiple frequency ranges. In this article, hierarchical unit-cells are obtained, where features at each length scale result in a band gap within a targeted frequency range. Our novel approach, the ‘‘hierarchical unit-cell template method,’’ is an interpretable machine-learning approach that uncovers global unit-cell shape/topology patterns corresponding to predefined band-gap objectives. A scale-separation effect is observed where the coarse-scale band-gap objective is mostly unaffected by the fine-scale features despite the closeness of their length scales, thus enabling an efficient hierarchical algorithm. Moreover, the hierarchical patterns revealed are not predefined or self-similar hierarchies as common in current hierarchical phononic materials. Furthermore, our approach offers a flexible and efficient method for the exploration of new regions in the hierarchical design space, extracting minimal effective patterns for inverse design in applications targeting multiple frequency ranges.

Architected materials↗

TRANSP integrated modeling code for interpretive and predictive analysis of tokamak plasmas

This paper provides a comprehensive review of the TRANSP code, a sophisticated tool for interpretive and predictive analysis of tokamak plasmas, detailing its major capabilities and features. It describes the equations for particle, power, and momentum balance analysis, as well as the poloidal field diffusion equations. The paper outlines the spatial and time grids used in TRANSP and details the equilibrium assumptions and solvers. Various models for heating and current drive and radiation, including updates to the NUBEAM model, are discussed. The handling of large-scale events such as sawtooth crashes and pellet injections is examined, along with the predictive capabilities for advancing plasma profiles. The integration of TRANSP with the ITER Integrated Modeling and Analysis Suite (IMAS) is highlighted, demonstrating enhanced data access and analysis capabilities. Additionally, the paper discusses best practices and continuous integration techniques to enhance TRANSP's robustness. The suite of TRANSP tools, designed for efficient data analysis and simulation, further supports the optimization of tokamak operations and coupling with other tokamak codes. Continuous development and support ensure that TRANSP remains a major code for the analysis of experimental data for controlled thermonuclear fusion, maintaining its critical role in supporting the optimization of tokamak operations and advancing fusion research.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗