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At least 199 records · Page 11

Soil surface CO2 fluxes and the carbon budget of a grassland

Measurements of soil surface CO2 fluxes are reported for three sites within the First International Satellite Land Surface Climatology Project (ISLSCP) Field Experiment (FIFE) area, and simple empirical equations are fit to the data to provide predictions of soil fluxes from environmental observations. A prototype soil chamber, used to make the flux measurements, is described and tested by comparing CO2 flux measurements to a 40-L chamber, a 1-m/cu chamber, and eddy correlation. Results suggest that flux measurements with the prototype chamber are consistent with measurements by other methods to within about 20 percent. A simple empirical equation based on 10-cm soil temperature, 0- to 10-cm soil volumetric water content, and leaf area index predicts the soil surface CO2 flux with a rms error of 1.2 micro-mol sq m/s for all three sites. Further evidence supports using this equation to evaluate soil surface CO2 during the 1987 FIFE experiment. The soil surface CO2 fluxes when averaged over 24 hours are comparable to daily gross canopy photosynthetic rates. For 6 days of data the net daily accumulation of carbon is about 0.6 g CO2 sq m/d; this is only a few percent of the daily gross accumulation of carbon by photosynthesis. As the soil became drier in 1989, the net accumulation of carbon by the prairie increased, suggesting that the soil flux is more sensitive to temperature and drought than the photosynthetic fluxes.

Norman, J. M.↗

Dryness controls temperature-optimized gross primary productivity across vegetation types

Temperature response of gross primary productivity (GPP) is a well-known property of ecosystem, but GPP at the optimum temperature (GPP_T opt ) has not been fully discussed. Our understanding of how GPP_T opt responds to warming and water availability is highly limited. Here, in this study, we analyzed data at 326 globally distributed eddy covariance sites (79°N-37°S), to identify controlling factors of GPP_T opt . Although GPP_T opt was significantly influenced by soil moisture, global solar radiation, mean annual temperature, and vapor pressure deficit in a non-linear pattern (R 2 = 0.47), the direction and magnitude of these climate variables’ effects on GPP_T opt depend on the dryness index (DI), a ratio of potential evapotranspiration to precipitation. The spatial pattern showed that soil moisture did not affect GPP_T opt across energy-limited sites with DI < 1 while dominated GPP_T opt across water-limited sites with DI >1. The temporal pattern showed that GPP_T opt was lowered by warming or low precipitation in water-limited sites while energy-limited sites tended to maintain a stable GPP_T opt regardless of changes in air temperature. Vegetation types in humid climates tended to have higher GPP_T opt and were more likely to benefit from a warmer climate since it was not restricted by water conditions. This study highlights that the response of GPP_T opt to global warming depends on the dryness conditions, which explains the nonlinear control of water and temperature over GPP_T opt . Our finding is essential to realistic prediction of terrestrial carbon uptake under future climate and vegetation conditions.

54 ENVIRONMENTAL SCIENCES↗

UAS remote sensing (3DR SOLO platform): multispectral reflectance and normalized difference vegetation index, Seward Peninsula, Alaska, 2022

Airborne remote sensing data collected using a Parrot Sequoia+ multispectral sensor installed on a 3DR SOLO unoccupied aerial system (UAS) – operated by the Terrestrial Ecosystem Science & Technology group https://www.bnl.gov/envsci/testgroup/ at Brookhaven National Laboratory. This package includes data from 19 flights flown over the NGEE-Arctic, Kougarok Mile Marker (MM) 80, Kougarok Fire Complex (KFC) and Teller MM 27 sites in July 2022. Derived image products include point cloud, ortho-mosaiced multispectral image, a digital surface model (DSM) using the structure from motion (SfM) technique, and a normalized difference vegetation index (NDVI) map. Unprocessed and processed data products are included in this package (processing levels 0-2). Data and metadata are provided as text (*.txt, *.json, *hdr,), tabular (*.dat, *.csv), point cloud (*.laz), Cloud Optimized GeoTIFF (COG, *.tif), and image (*.jpg, *.tif, *png) formats.The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗

pH dependent reactivity of boehmite surfaces from first principles molecular dynamics

pH dependent interfacial chemistry depends upon the distribution and respective pKa values of different surface active sites. This is highly relevant to the chemistry of nanoparticle morphologies that expose faces with varying surface termination. Recent synthetic advances for nanoparticles of various minerals, including AlO(OH) (boehmite), present an excellent opportunity to compare and contrast predicted surface pKa on low Miller index planes so as to reinterpret reported interfacial properties (i.e., point of zero charge – PZC) and reactivity. This work employs ab initio molecular dynamics and empirical models to predict site-specific pKa values of accurate (benchmarked) surface models of boehmite. Using the different surface site populations, the PZC is determined and the influence this has upon reported interfacial chemistry is described.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Grain Size Variations in the Murray Formation: Stratigraphic Evidence for Changing Depositional Environments in Gale Crater, Mars

The lowermost exposure of the Murray formation in Gale crater, Mars, was interpreted as sediment deposited in an ancient lake based on data collected by the Curiosity rover. Constraining the stratigraphic extent and duration of this environment has important implications for the paleohydrology of Gale. Insights into early Martian environments and paleofluid flow velocity can be obtained from grain size in rocks. Visual inspection of grain size is not always available for rocks investigated at field sites on Mars due to limited image coverage. But grain sizes can also be estimated from the Gini Index Mean Score, a grain-size proxy that uses point-to-point chemical variations in ChemCam Laser Induced Breakdown Spectroscopy data. Here, new Gini Index Mean Score results indicate that the Murray formation is dominated by mudstones with grains smaller than the spatial resolution of all rover cameras. Intervals of fine to coarse sandstone also are present, some of which are verified using observations of grain size and sedimentary structures in associated images. Overall, results demonstrate that most of the Murray consists of mudstone, suggesting settling of grains from suspension in low energy depositional environments such as lakes. Some of the mudstones contain desiccation cracks indicating periods of drying with a lowering of lake water level. However, beds and lenses of cross-bedded sandstones are common at specific intervals, suggesting episodes of fluvial and possibly eolian deposition. The persistence of lacustrine deposits interspersed with fluvial deposits suggests that liquid water was sustained on the Martian surface for tens of thousands to millions of years.

58 GEOSCIENCES↗

Biophysical, morphological, canopy optical property, and productivity data from the Superior National Forest

Described here are the results of a NASA field experiment conducted in the Superior National Forest near Ely, Minnesota, during the summers of 1983 and 1984. The purpose of the experiment was to examine the use of remote sensing to provide measurements of biophysical parameters in the boreal forests. Leaf area index, biomass, net primary productivity, canopy coverage, overstory and understory species composition data are reported for about 60 sites, representing a range of stand density and age for aspen and spruce. Leaf, needle, and bark high-resolution spectral reflectance and transmittance data are reported for the major boreal forest species. Canopy bidirectional reflectance measurements are provided from a helicopter-mounted Barnes Multiband Modular Radiometer (MMR) and the Thematic Mapper Simulator (TMS) on the NASA C-130 aircraft.

Hall, F. G.↗

Temporal Stability of the NDVI-LAI Relationship in a Napa Valley Vineyard

Remotely sensed normalized difference vegetation index (NDVI) values, derived from high-resolution satellite images, were compared with ground measurements of vineyard leaf area index (LAI) periodically during the 2001 growing season. The two variables were strongly related at six ground calibration sites on each of four occasions (r squared = 0.91 to 0.98). Linear regression equations relating the two variables did not significantly differ by observation date, and a single equation accounted for 92 percent of the variance in the combined dataset. Temporal stability of the relationship opens the possibility of transforming NDVI maps to LAI in the absence of repeated ground calibration fieldwork. In order to take advantage of this circumstance, however, steps should be taken to assure temporal consistency in spectral data values comprising the NDVI.

Johnson, L. F.↗

Habitability Assessment at Gale Crater: Implications from Initial Results

Mars Science Laboratory has made measurements that contribute to our assessment of habitability potential at Gale Crater. Campaign organization into a consistent set of measurable parameters allows us to rank the relative habitability potential of sites we study, ultimately laying a foundation for a global context inclusive of past and future Mars mission observations. Chemical, physical, geological and geographic attributes shape environments. Isolated measurements of these factors may be insufficient to deem an environment habitable, but the sum of measurements can help predict locations with greater or lesser habitability potential. Metrics for habitability assessment based on field work at sites sharing features analogous to Mars have previously been suggested. Grouping these metrics helps us to develop an index for their application to habitability assessment. The index is comprised of the weighted values for four groups of parameters, the habitability threshold for each is to be determined.

Conrad, Pamela G.↗

Habitability Assessment at Gale Crater: Implications from Initial Results

Mars Science Laboratory has made measurements that contribute to our assessment of habitability potential at Gale Crater. Campaign organization into a consistent set of measurable parameters allows us to rank the relative habitability potential of sites we study, ultimately laying a foundation for a global context inclusive of past and future Mars mission observations. Chemical, physical, geological and geographic attributes shape environments. Isolated measurements of these factors may be insufficient to deem an environment habitable, but the sum of measurements can help predict locations with greater or lesser habitability potential. Metrics for habitability assessment based on field work at sites sharing features analogous to Mars have previously been suggested. Grouping these metrics helps us to develop an index for their application to habitability assessment. The index is comprised of the weighted values for four groups of parameters, the habitability threshold for each is to be determined.

Conrad, P. G.↗

A Seasonal Trend of Single Scattering Albedo in Southern African Biomass-burning Particles: Implications for Satellite Products and Estimates of Emissions for the World's Largest Biomass-burning Source

As a representative site of the southern African biomass-burning region, sun-sky data from the 15 year Aerosol Robotic Network (AERONET) deployment at Mongu, Zambia, was analyzed. For the biomass-burning season months (July-November), we investigate seasonal trends in aerosol single scattering albedo (SSA), aerosol size distributions, and refractive indices from almucantar sky scan retrievals. The monthly mean single scattering albedo at 440 nm in Mongu was found to increase significantly from approx.. 0.84 in July to approx. 0.93 in November (from 0.78 to 0.90 at 675 nm in these same months). There was no significant change in particle size, in either the dominant accumulation or secondary coarse modes during these months, nor any significant trend in the Angstrom exponent (440-870 nm; r(exp 2) = 0.02). A significant downward seasonal trend in imaginary refractive index (r(exp 2) = 0.43) suggests a trend of decreasing black carbon content in the aerosol composition as the burning season progresses. Similarly, burning season SSA retrievals for the Etosha Pan, Namibia AERONET site also show very similar increasing single scattering albedo values and decreasing imaginary refractive index as the season progresses. Furthermore, retrievals of SSA at 388 nm from the Ozone Monitoring Instrument satellite sensor show similar seasonal trends as observed by AERONET and suggest that this seasonal shift is widespread throughout much of southern Africa. A seasonal shift in the satellite retrieval bias of aerosol optical depth from the Moderate Resolution Imaging Spectroradiometer collection 5 dark target algorithm is consistent with this seasonal SSA trend since the algorithm assumes a constant value of SSA. Multi-angle Imaging Spectroradiometer, however, appears less sensitive to the absorption-induced bias.

aerosol absorption↗

Evaluation of remote sensing-based evapotranspiration products at low-latitude eddy covariance sites

Remote sensing-based evapotranspiration (ET) products have been evaluated primarily using data from northern middle latitudes; therefore, little is known about their performance at low latitudes. To address this bias, an evaluation dataset was compiled using eddy covariance data from 40 sites between latitudes 30° S and 30° N. The flux data were obtained from the emerging network in Mexico (MexFlux) and from openly available databases of FLUXNET, AsiaFlux, and OzFlux. This unique reference dataset was then used to evaluate remote sensing-based ET products in environments that have been underrepresented in earlier studies. The evaluated products were: MODIS ET (MOD16, both the discontinued collection 5 (C5) and the latest collection (C6)), Global Land Evaporation Amsterdam Model (GLEAM) ET, and Atmosphere-Land Exchange Inverse (ALEXI) ET. Products were compared with unadjusted fluxes (ETorig) and with fluxes corrected for the lack of energy balance closure (ETebc). Three common statistical metrics were used: coefficient of determination (R2), root mean square error (RMSE), and percent bias (PBIAS). The effect of a vegetation mismatch between pixel and site on product evaluation results was investigated by examining the relationship between the statistical metrics and product-specific vegetation match indexes. Evaluation results of this study and those published in the literature were used to examine the performance of the products across latitudes. Differences between the MOD16 collection 5 and 6 datasets were generally smaller than differences with the other products. Performance and ranking of the evaluated products depended on whether ETorig or ETebc was used. When using ETorig, GLEAM generally had the highest R2, smallest PBIAS, and best RMSE values across the studied land cover types and climate zones. Neither MOD16 nor ALEXI performed consistently better than the other. When using ETebc, none of the products stood out in terms of both low bias and strong correlations. The use of ETebc instead of ETorig affected the biases more than the correlations. The product evaluation results showed no significant relationship with the degree of match between the vegetation at the pixel and site scale. The latitudinal comparison showed tendencies of lower R2 (all products) but better PBIAS and normalized RMSE values (MOD16 and GLEAM) for forests at low latitudes than for forests at northern middle latitudes. For non-forest vegetation, the products showed no clear latitudinal differences in performance.

Diego Salazar-Martínez↗

Senegalese land surface change analysis and biophysical parameter estimation using NOAA AVHRR spectral data

Surface biophysical estimates were derived from analysis of NOAA Advanced Very High Spectral Resolution (AVHRR) spectral data of the Senegalese area of west Africa. The parameters derived were of solar albedo, spectral visible and near-infrared band reflectance, spectral vegetative index, and ground temperature. Wet and dry linked AVHRR scenes from 1981 through 1985 in Senegal were analyzed for a semi-wet southerly site near Tambacounda and a predominantly dry northerly site near Podor. Related problems were studied to convert satellite derived radiance to biophysical estimates of the land surface. Problems studied were associated with sensor miscalibration, atmospheric and aerosol spatial variability, surface anisotropy of reflected radiation, narrow satellite band reflectance to broad solar band conversion, and ground emissivity correction. The middle-infrared reflectance was approximated with a visible AVHRR reflectance for improving solar albedo estimates. In addition, the spectral composition of solar irradiance (direct and diffuse radiation) between major spectral regions (i.e., ultraviolet, visible, near-infrared, and middle-infrared) was found to be insensitive to changes in the clear sky atmospheric optical depth in the narrow band to solar band conversion procedure. Solar albedo derived estimates for both sites were not found to change markedly with significant antecedent precipitation events or correspondingly from increases in green leaf vegetation density. The bright soil/substrate contributed to a high albedo for the dry related scenes, whereas the high internal leaf reflectance in green vegetation canopies in the near-infrared contributed to high solar albedo for the wet related scenes. The relationship between solar albedo and ground temperature was poor, indicating the solar albedo has little control of the ground temperature. The normalized difference vegetation index (NDVI) and the derived visible reflectance were more sensitive to antecedent rainfall amounts and green vegetation changes than were near-infrared changes. The information in the NDVI related to green leaf density changes primarily was from the visible reflectance. The contribution of the near-infrared reflectance to explaining green vegetation is largely reduced when there is a bright substrate.

Vukovich, Fred M.↗

Representing cropping systems with the MEMS 2 ecosystem model

Abstract Croplands have been the focus of substantial investigation due to their considerable potential for sequestering carbon. Understanding the potential for soil organic carbon (SOC) sequestration and necessary management strategies will be enabled with accurate process‐based models. Accurately representing crop growth and agricultural practices will be critical for realistic SOC modeling. The MEMS 2 model incorporates a current understanding of SOC formation and stabilization, measurable SOC pools, and deep SOC dynamics and is seen as a highly promising tool to inform management intervention for SOC sequestration. Thus far, MEMS 2 has been developed to represent grasslands. In this study, we further developed MEMS 2 to model annual grain crops and common agricultural practices, such as irrigation, fertilization, harvesting, and tillage. Using four Ameriflux sites, we demonstrated an accurate simulation of crop growth and development. Model performance was strong for simulating aboveground biomass (index of agreement [d] range of 0.89–0.98) and green leaf area index (dfrom 0.90 to 0.96) across corn, soybean, and winter wheat. Good agreement with observations was also achieved for net ecosystem CO 2 exchange (dfrom 0.90 to 0.96), evapotranspiration (dfrom 0.91 to 0.94), and soil temperature (dof 0.96), while discrepancy with the available soil water content data remain (dfrom 0.14 to 0.81 at four depths to 100 cm). While we will continue model testing and improvement, MEMS 2 (version 2.14) has now demonstrated its ability to effectively simulate the growth of common grain crops and practices.

Agriculture↗

Assessing the role of surface carbon on the surface stability and reactivity of β-Mo 2 C catalysts

Transition-metal carbides, e.g., Mo 2 C, promote industrially important catalytic reactions with activities comparable to precious-metal catalysts. Yet, the nature of the catalytically active sites remains unclear. Herein, density functional theory calculations are applied to systematically assess the stability of low-Miller index facets of β-Mo 2 C as a function of carbon chemical potential (uC) and surface-carbon coverage (nC). When reconstruction of surface carbon is considered to characterize β-Mo 2 C under varying environments, the (111) and (101) surfaces are predicted to be most stable, dominating the Wulff particle surface area across a broad range of uC. The surface-carbon coverage is predicted to steadily increase for all low-index facets under more carburizing reaction conditions, leading to distinct effects on the adsorption energetics for atomic hydrogen and oxygen. Whereas H binding is only slightly affected by surface carbon, O is systematically destabilized. The findings reported indicate that consideration of only bulk-terminated surfaces, and the common focus of theoretical studies on the bulk-truncated, close-packed (100) surface, is likely insufficient to capture the reactivity of the working ..beta..-Mo 2 C catalyst. Similar to metal oxides, β-Mo2C catalysts are predicted to be dynamic materials with surface compositions and reactivities that evolve in response to the environment.

36 MATERIALS SCIENCE↗

Structure-guided design of direct-acting antivirals that exploit the gem-dimethyl effect and potently inhibit 3CL proteases of severe acute respiratory syndrome Coronavirus-2 (SARS-CoV-2) and middle east respiratory syndrome coronavirus (MERS-CoV)

The high morbidity and mortality associated with SARS-CoV-2 infection, the etiological agent of COVID-19, has had a major impact on global public health. Significant progress has been made in the development of an array of vaccines and biologics, however, the emergence of SARS-CoV-2 variants and breakthrough infections are an ongoing major concern. Furthermore, there is an existing paucity of small-molecule host and virus-directed therapeutics and prophylactics that can be used to counter the spread of SARS-CoV-2, and any emerging and re-emerging coronaviruses. Here, we describe herein our efforts to address this urgent need by focusing on the structure-guided design of potent broad-spectrum inhibitors of SARS-CoV-2 3C-like protease (3CL pro or Main protease), an enzyme essential for viral replication. The inhibitors exploit the directional effects associated with the presence of a gem-dimethyl group that allow the inhibitors to optimally interact with the S4 subsite of the enzyme. Several compounds were found to potently inhibit SARS-CoV-2 and MERS-CoV 3CL proteases in biochemical and cell-based assays. Specifically, the EC50 values of aldehyde 1c and its corresponding bisulfite adduct 1d against SARS-CoV-2 were found to be 12 and 10 nM, respectively, and their CC50 values were >50 μM. Furthermore, deuteration of these compounds yielded compounds 2c/2d with EC50 values 11 and 12 nM, respectively. Replacement of the aldehyde warhead with a nitrile (CN) or an α-ketoamide warhead or its corresponding bisulfite adduct yielded compounds 1g, 1e and 1f with EC50 values 60, 50 and 70 nM, respectively. High-resolution cocrystal structures have identified the structural determinants associated with the binding of the inhibitors to the active site of the enzyme and, furthermore, have illuminated the mechanism of action of the inhibitors. Overall, the high Safety Index (SI) (SI=CC50/EC50) displayed by these compounds suggests that they are well-suited to conducting further preclinical studies.

3-Chymotrypsin-like protease (3CLpro)↗

Updated respiration routines alter spatio-temporal patterns of carbon cycling in a global land surface model

Abstract We updated the routines used to estimate leaf maintenance respiration (MR) in the Energy Land Model (ELM) using a comprehensive global respiration data base. The updated algorithm includes a temperature acclimating base rate, an updated instantaneous temperature response, and new plant functional type specific parameters. The updated MR algorithm resulted in a very large increase in global MR of 16.1 Pg (38%), but the signal was not geographically uniform. The increase was concentrated in the tropics and humid warm-temperate forests. The increase in MR led to large but proportionally smaller decreases in global net primary production (19%) and in average global leaf area index (15%). The effect on global gross primary production (GPP) was a more modest 5.7 Pg (4%). A detailed site level analysis also demonstrated a wide range of effects the updated algorithm can have on the seasonal cycle of GPP. Output from the updated and old models did not differ markedly in how closely they matched a suite of benchmarks. Given the substantial impact on the land surface carbon cycle, a neutral influence on model benchmarks, and better alignment with empirical evidence, an MR algorithm similar to the one presented here should be adopted into ELM.

54 ENVIRONMENTAL SCIENCES↗

Aircraft and Ground Vehicle Winter Runway Friction Assessment

Some background information is given together with the scope and objectives of a 5-year, Joint Winter Runway Friction Measurement Program between the National Aeronautics & Space Administration (NASA), Transport Canada (TC), and the Federal Aviation Administration (FAA). The primary objective of this effort is to perform instrumented aircraft and ground vehicle tests aimed at identifying a common number that all the different ground vehicle devices would report. This number, denoted the International Runway Friction Index (IRFI), will be related to all types of aircraft stopping performance. The range of test equipment, the test sites, test results and accomplishments, the extent of the substantial friction database compiled, and future test plans will be described. Several related studies have also been implemented including the effects of contaminant type on aircraft impingement drag, and the effectiveness of various runway and aircraft de-icing chemical types, and application rates.

Yager, Thomas J.↗

Evaluating Corn (Zea Mays L.) N Variability Via Remote Sensed Data

Transformations and losses of nitrogen (N) throughout the growing season can be costly. Methods in place to improve N management and facilitate split N applications during the growing season can be time consuming and logistically difficult. Remote sensing (RS) may be a method to rapidly assess temporal changes in crop N status and promote more efficient N management. This study was designed to evaluate the ability of three different RS platforms to predict N variability in corn (Zea mays L.) leaves during vegetative and early reproductive growth stages. Plots (15 x 15m) were established in the Coastal Plain (CP) and Appalachian Plateau (AP) physiographic regions each spring from 2000 to 2002 in a completely randomized design. Treatments consisted of four N rates (0, 56, 112, and 168 kg N/ha) applied as ammonium nitrate (NH4N03) replicated four time. Spectral measurements were acquired via spectroradiometer (lambda = 350 - 1050 nm), Airborne Terrestrial Applications Sensor (ATLAS) (lambda = 400 - 12,500 nm), and the IKONOS satellite (lambda = 450 - 900 nm). Spectroradiometer data were collected on a biweekly basis from V4 through R1. Due to the nature of - satellite and aircraft acquisitions, these data were acquired per availability. Chlorophyll meter (SPAD) and tissue N were collected as ancillary data along with each RS acquisition. Results showed vegetation indices derived from hand-held spectroradiometer measurements as early as V6-V8 were linearly related to yield and tissue N content. ATLAS data was correlated with tissue N at the AP site during the V6 stage (r2 = 0.66), but no significant relationships were observed at the CP site. No significant relationships were observed between plant N and IKONOS imagery. Using a combination of the greenness vegetation index (GNDVI) and the normalized difference vegetation index (NDVI), RS data acquired via ATLAS and the spectroradiometer could be used to evaluate tissue N variability and estimate corn yield variability under ideal growing conditions.

Sullivan, D. G.↗