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At least 199 records · Page 11
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Functional capacities of microbial communities to carry out large scale geochemical processes are maintained during ex situ anaerobic incubation

Mechanisms controlling CO 2 and CH 4 production in wetlands are central to understanding carbon cycling and greenhouse gas exchange. However, the volatility of these respiration products complicates quantifying their rates of production in the field. Attempts to circumvent the challenges through closed system incubations, from which gases cannot escape, have been used to investigate bulk in situ geochemistry. Efforts towards mapping mechanistic linkages between geochemistry and microbiology have raised concern regarding sampling and incubation-induced perturbations. Microorganisms are impacted by oxygen exposure, increased temperatures and accumulation of metabolic products during handling, storage, and incubation. We probed the extent of these perturbations, and their influence on incubation results, using high-resolution geochemical and microbial gene-based community profiling of anaerobically incubated material from three wetland habitats across a permafrost peatland. We compared the original field samples to the material anaerobically incubated over 50 days. Bulk geochemistry and phylum-level microbiota in incubations largely reflected field observations, but divergence between field and incubations occurred in both geochemistry and lineage-level microbial composition when examined at closer resolution. Despite the changes in representative lineages over time, inferred metabolic function with regards to carbon cycling largely reproduced field results suggesting functional consistency. Habitat differences among the source materials remained the largest driver of variation in geochemical and microbial differences among the samples in both incubations and field results. While incubations may have limited usefulness for identifying specific mechanisms, they remain a viable tool for probing bulk-scale questions related to anaerobic C cycling, including CO 2 and CH 4 dynamics.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

SPRUCE: Shrub-Layer Vegetation Biomass Collection Metadata, Marcell Experimental Forest, Minnesota, August 2025

This data set contains metadata associated with shrub-layer vegetation samples collected from the Spruce and Peatland Responses Under Changing Environments (SPRUCE) experiment in August 2025. This sample metadata contains no analytical results and is a reference for analytical datasets. To ensure accessibility and discoverability, each sample was assigned an International Generic Sample Number (IGSN), a persistent identifier, using System for Earth and Extraterrestrial Sample Registration (SESAR). These samples were used for downstream analysis by multiple teams of researchers the results of which will be reported separately. This dataset contains one data file in comma separate (.csv) format. Additional metadata are provided: one data dictionary and a file-level metadata file in comma separate (.csv) format and a user guide in PDF (*.pdf) format. An aliquot of most samples is stored in the SPRUCE archive and may be available for further analysis by request. See below under 7 Sample Access. Access this collection event on SESAR https://doi.org/10.58052/IEJ9B069L. To inquire about obtaining archived samples for analysis, reach out using the Contact Sample Owner form located on the bottom of the landing page in SESAR.

Birkebak, Joshua [ORNL] (ORCID:0009000955611494)↗
DOE OSTI2025

SPRUCE: Shrub Leaf and Stem Functional Traits from 10-year Shrub Layer Biomass Harvests (August 2025)

This data set contains Leaf Mass Area (LMA), Specific Leaf Area (SLA), Leaf Area Index (LAI), and Huber value (Hv) measurements from the 10-year Shrub-layer Biomass harvests in the Spruce and Peatland Responses Under Environmental Change (SPRUCE) experiment in August 2025. The total ground-level cross-sectional sapwood area of Chamaedaphne calyculata (CHCA), Rhododendron groenlandicum (RHGR), and Vaccinium angustifolium (VAAN) were calculated for each of the three shrub-layer community survey plots located in each experimental enclosure. Representative current-year leaves were removed, scanned, dried, and weighed to derive SLA. Grab-samples for VAAN were used to calculate SLA when no biomass was harvested in the shrub-layer community plots. These SLA values were used to infer total one-sided leave surface area from the total species lead dry mass for calculation of LAI and Hv.

Birkebak, Joshua [ORNL] (ORCID:0009000955611494)↗
DOE OSTI2020

AmeriFlux PE-QFR Quistococha Forest Reserve

This is the AmeriFlux version of the carbon flux data for the site PE-QFR Quistococha Forest Reserve. Site Description - The study site is located at Quistococha on the outskirts of Iquitos, Loreto region, Peru. Quistococha is a natural protected forest reserve and an official scientific research area for IIAP. The EC flux tower (45 m tall) is located at 73o 19’ 08.1’’ W; 3o 50’ 03.9’’ S within a pristine palm swamp peatland that is within the reserve. The major vegetation type is Mauritia flexuosa (moriche palm, or aguaje in Spanish, reaching 35 m height).

Roman, Tyler↗
DOE OSTI2021

AmeriFlux US-BZF Bonanza Creek Rich Fen

This is the AmeriFlux version of the carbon flux data for the site US-BZF Bonanza Creek Rich Fen. Site Description - The rich fen is in the boreal peatland lowlands of the Tanana Flats in interior Alaska. Lacks near-surface permafrost even though the surrounding landscape is marked by the presence of permafrost. Peat depth is 1-2m. Primary wind direction in the summer is WSW.

Euskirchen, Eugenie↗
DOE OSTI2021

AmeriFlux CA-SMC Smith Creek

This is the AmeriFlux version of the carbon flux data for the site CA-SMC Smith Creek. Site Description - Boreal forest-peatland landscape with discontinuous permafrost, 19 km southeast of Wrigley, NT, Canada

Sonnentag, Oliver↗
DOE OSTI2021

AmeriFlux FLUXNET-1F PE-QFR Quistococha Forest Reserve

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site PE-QFR Quistococha Forest Reserve. This is the FLUXNET version of the carbon flux data for the site PE-QFR Quistococha Forest Reserve produced by applying the standard ONEFlux (1F) software. Site Description - The study site is located at Quistococha on the outskirts of Iquitos, Loreto region, Peru. Quistococha is a natural protected forest reserve and an official scientific research area for IIAP. The EC flux tower (45 m tall) is located at 73o 19’ 08.1’’ W; 3o 50’ 03.9’’ S within a pristine palm swamp peatland that is within the reserve. The major vegetation type is Mauritia flexuosa (moriche palm, or aguaje in Spanish, reaching 35 m height).

Roman, Tyler↗
DOE OSTI2022

AmeriFlux FLUXNET-1F US-BZF Bonanza Creek Rich Fen

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site US-BZF Bonanza Creek Rich Fen. This is the FLUXNET version of the carbon flux data for the site US-BZF Bonanza Creek Rich Fen produced by applying the standard ONEFlux (1F) software. Site Description - The rich fen is in the boreal peatland lowlands of the Tanana Flats in interior Alaska. Lacks near-surface permafrost even though the surrounding landscape is marked by the presence of permafrost. Peat depth is 1-2m. Primary wind direction in the summer is WSW.

Euskirchen, Eugenie↗
DOE OSTI2022

AmeriFlux FLUXNET-1F CA-ARB Attawapiskat River Bog

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site CA-ARB Attawapiskat River Bog. This is the FLUXNET version of the carbon flux data for the site CA-ARB Attawapiskat River Bog produced by applying the standard ONEFlux (1F) software. Site Description - Ontario Ministry of Environment and Climate Change's Environmental Monitoring and Reporting Branch has established five carbon flux monitoring towers in Ontario’s Far North as part of its Climate Change Modelling and Monitoring program. These long term monitoring stations measure carbon exchange and a suite of soil and meteorological parameters over peatland ecosystems to better understand carbon cycling in Ontario’s Far North. Information produced by these monitoring stations will assist the province in land use planning and the development of climate change adaptation strategies.

Todd, Aaron↗
DOE OSTI2022

AmeriFlux FLUXNET-1F CA-ARF Attawapiskat River Fen

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site CA-ARF Attawapiskat River Fen. This is the FLUXNET version of the carbon flux data for the site CA-ARF Attawapiskat River Fen produced by applying the standard ONEFlux (1F) software. Site Description - Ontario Ministry of Environment and Climate Change's Environmental Monitoring and Reporting Branch has established five carbon flux monitoring towers in Ontario’s Far North as part of its Climate Change Modelling and Monitoring program. These long term monitoring stations measure carbon exchange and a suite of soil and meteorological parameters over peatland ecosystems to better understand carbon cycling in Ontario’s Far North. Information produced by these monitoring stations will assist the province in land use planning and the development of climate change adaptation strategies.

Todd, Aaron↗
DOE OSTI2025

AmeriFlux FLUXNET-1F CA-SMC Smith Creek

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site CA-SMC Smith Creek. This is the FLUXNET version of the carbon flux data for the site CA-SMC Smith Creek produced by applying the standard ONEFlux (1F) software. Site Description - Boreal forest-peatland landscape with discontinuous permafrost, 19 km southeast of Wrigley, NT, Canada

Sonnentag, Oliver [Universite de Montreal, Departe↗
DOE OSTI2025

AmeriFlux FLUXNET-1F AR-TF2 Rio Pipo bog

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site AR-TF2 Rio Pipo bog. This is the FLUXNET version of the carbon flux data for the site AR-TF2 Rio Pipo bog produced by applying the standard ONEFlux (1F) software. Site Description - Pristine Sphagnum magellanicum dominated bog located in Parque Nacional Tierra del Fuego. The peatland extends about 60 ha.

Kutzbach, Lars [Universität Hamburg]↗
DOE OSTI2025

AmeriFlux CA-PB2 Polar Bear 2 - Fen

This is the AmeriFlux version of the carbon flux data for the site CA-PB2 Polar Bear 2 - Fen. Site Description - Ontario Ministry of Environment and Climate Change's Environmental Monitoring and Reporting Branch has established five carbon flux monitoring towers in Ontario’s Far North as part of its Climate Change Modelling and Monitoring program. These long term monitoring stations measure carbon exchange and a suite of soil and meteorological parameters over peatland ecosystems to better understand carbon cycling in Ontario’s Far North. Information produced by these monitoring stations will assist the province in land use planning and the development of climate change adaptation strategies.

Humphreys, Elyn [Carleton University]↗
DOE OSTI2025

AmeriFlux CA-PB1 Polar Bear 1 - Peat Plateau

This is the AmeriFlux version of the carbon flux data for the site CA-PB1 Polar Bear 1 - Peat Plateau. Site Description - Ontario Ministry of Environment and Climate Change's Environmental Monitoring and Reporting Branch has established five carbon flux monitoring towers in Ontario’s Far North as part of its Climate Change Modelling and Monitoring program. These long term monitoring stations measure carbon exchange and a suite of soil and meteorological parameters over peatland ecosystems to better understand carbon cycling in Ontario’s Far North. Information produced by these monitoring stations will assist the province in land use planning and the development of climate change adaptation strategies.

Humphreys, Elyn [Carleton University]↗
DOE OSTI2026

AmeriFlux FLUXNET-1F CA-PB1 Polar Bear 1 - Peat Plateau

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site CA-PB1 Polar Bear 1 - Peat Plateau. This is the FLUXNET version of the carbon flux data for the site CA-PB1 Polar Bear 1 - Peat Plateau produced by applying the standard ONEFlux (1F) software. Site Description - Ontario Ministry of Environment and Climate Change's Environmental Monitoring and Reporting Branch has established five carbon flux monitoring towers in Ontario’s Far North as part of its Climate Change Modelling and Monitoring program. These long term monitoring stations measure carbon exchange and a suite of soil and meteorological parameters over peatland ecosystems to better understand carbon cycling in Ontario’s Far North. Information produced by these monitoring stations will assist the province in land use planning and the development of climate change adaptation strategies.

Humphreys, Elyn [Carleton University]↗
DOE OSTI2026

AmeriFlux FLUXNET-1F CA-PB2 Polar Bear 2 - Fen

This is the AmeriFlux Management Project (AMP) created FLUXNET-1F version of the carbon flux data for the site CA-PB2 Polar Bear 2 - Fen. This is the FLUXNET version of the carbon flux data for the site CA-PB2 Polar Bear 2 - Fen produced by applying the standard ONEFlux (1F) software. Site Description - Ontario Ministry of Environment and Climate Change's Environmental Monitoring and Reporting Branch has established five carbon flux monitoring towers in Ontario’s Far North as part of its Climate Change Modelling and Monitoring program. These long term monitoring stations measure carbon exchange and a suite of soil and meteorological parameters over peatland ecosystems to better understand carbon cycling in Ontario’s Far North. Information produced by these monitoring stations will assist the province in land use planning and the development of climate change adaptation strategies.

Humphreys, Elyn [Carleton University]↗
DOE OSTI2021

SPRUCE Data

This data set provides 16S Bacterial and ITS fungal communities via DNA or RNA, microbial biomass carbon and nitrogen, and extracellular enzyme activity at the time of fresh peat, ingrowth peat or sand sampling. These samples were collected as part of the Spruce and Peatland Responses Under Changing Environments (SPRUCE) experiment.

Smith, Montana L↗
DOE OSTI2020

Using CESM-RESFire to understand climate–fire–ecosystem interactions and the implications for decadal climate variability

Large wildfires exert strong disturbance on regional and global climate systems and ecosystems by perturbing radiative forcing as well as the carbon and water balance between the atmosphere and land surface, while short- and long-term variations in fire weather, terrestrial ecosystems, and human activity modulate fire intensity and reshape fire regimes. The complex climate–fire–ecosystem interactions were not fully integrated in previous climate model studies, and the resulting effects on the projections of future climate change are not well understood. Here we use the fully interactive REgion-Specific ecosystem feedback Fire model (RESFire) that was developed in the Community Earth System Model (CESM) to investigate these interactions and their impacts on climate systems and fire activity. We designed two sets of decadal simulations using CESM-RESFire for present-day (2001–2010) and future (2051–2060) scenarios, respectively, and conducted a series of sensitivity experiments to assess the effects of individual feedback pathways among climate, fire, and ecosystems. Our implementation of RESFire, which includes online land–atmosphere coupling of fire emissions and fire-induced land cover change (LCC), reproduces the observed aerosol optical depth (AOD) from space-based Moderate Resolution Imaging Spectroradiometer (MODIS) satellite products and ground-based AErosol RObotic NETwork (AERONET) data; it agrees well with carbon budget benchmarks from previous studies. We estimate the global averaged net radiative effect of both fire aerosols and fire-induced LCC at –0.59±0.52 W m –2 , which is dominated by fire aerosol–cloud interactions (–0.82±0.19 W m –2 ), in the present-day scenario under climatological conditions of the 2000s. The fire-related net cooling effect increases by ~170 % to –1.60±0.27 W m –2 in the 2050s under the conditions of the Representative Concentration Pathway 4.5 (RCP4.5) scenario. Such considerably enhanced radiative effect is attributed to the largely increased global burned area (+19 %) and fire carbon emissions (+100 %) from the 2000s to the 2050s driven by climate change. The net ecosystem exchange (NEE) of carbon between the land and atmosphere components in the simulations increases by 33 % accordingly, implying that biomass burning is an increasing carbon source at short-term timescales in the future. High-latitude regions with prevalent peatlands would be more vulnerable to increased fire threats due to climate change, and the increase in fire aerosols could counter the projected decrease in anthropogenic aerosols due to air pollution control policies in many regions. We also evaluate two distinct feedback mechanisms that are associated with fire aerosols and fire-induced LCC, respectively. On a global scale, the first mechanism imposes positive feedbacks to fire activity through enhanced droughts with suppressed precipitation by fire aerosol–cloud interactions, while the second one manifests as negative feedbacks due to reduced fuel loads by fire consumption and post-fire tree mortality and recovery processes. These two feedback pathways with opposite effects compete at regional to global scales and increase the complexity of climate–fire–ecosystem interactions and their climatic impacts.

54 ENVIRONMENTAL SCIENCES↗