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Gross primary production (GPP) and red solar induced fluorescence (SIF) respond differently to light and seasonal environmental conditions in a subalpine conifer forest

The phenology of montane conifer forests is likely to shift in response to climate change and altered seasonal dynamics of light, temperature, and moisture. Solar-induced fluorescence (SIF) is expected to provide substantial improvement for mapping temporal changes in evergreen gross primary production (GPP) over greenness-based remote sensing indices. The utility of SIF to monitor seasonal changes in the phenology of conifer photosynthesis depends on the degree to which GPP and SIF respond in synchrony to key environmental drivers. However, to what extent SIF and GPP become decoupled by responding differently to the combined effects of light and other environmental conditions remains unknown. The goal of this study was to characterize the responses of GPP and SIFred to a suite of environmental drivers at the half-hour time scale and determine how these relationships change across seasons. We analyzed one year of tower-based SIFred and eddy covariance-derived GPP data from a conifer forest at Niwot Ridge, Colorado. We compared the light responses of GPP and SIFred across the year, finding that SIFred increased in response to light earlier in the year than did GPP. The light response of GPP had a positive temperature dependence in spring, and this dependency reversed in summer due to increased evaporative demand, while the light response of SIFred was less temperature dependent. Using artificial neural network ensemble analysis, we found that from spring to summer, SIFred did not exhibit a parallel response to the seasonally dynamic temperature and moisture controls on GPP. In summer SIFred was not correlated with canopy conductance, suggesting that SIF is less sensitive to stomatal control than GPP. Furthermore, our results suggest that, in conifers, photosystems begin to activate in spring prior to when water becomes available for photosynthesis, presenting a challenge for the use of SIF as a phenological indicator in conifer forests.

54 ENVIRONMENTAL SCIENCES↗

The origin of the energy–momentum conservation law

The interplay between the action–reaction principle and the energy–momentum conservation law is revealed by the examples of the Maxwell–Lorentz and Yang–Mills–Wong theories, and general relativity. These two statements are shown to be equivalent in the sense that both hold or fail together. Their mutual agreement is demonstrated most clearly in the self-interaction problem by taking account of the rearrangement of degrees of freedom appearing in the action of the Maxwell–Lorentz and Yang–Mills–Wong theories. The failure of energy–momentum conservation in general relativity is attributed to the fact that this theory allows solutions having nontrivial topologies. The total energy and momentum of a system with nontrivial topological content prove to be ambiguous, coordinatization-dependent quantities. For example, the energy of a Schwarzschild black hole may take any positive value greater than, or equal to, the mass of the body whose collapse is responsible for forming this black hole. We draw the analogy to the paradoxial Banach–Tarski theorem; the measure becomes a poorly defined concept if initial three-dimensional bounded sets are rearranged in topologically nontrivial ways through the action of free non-Abelian isometry groups. - Highlights: • The action–reaction principle and energy–momentum conservation hold or fail together. • Nontrivial topology is the reason for energy–momentum nonconservation in gravity. • The total energy of a black hole is an ambiguous coordinatization-dependent quantity. • This affair closely parallels that in the paradoxical Banach–Tarski theorem.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

The Urban Observatory: A Multi-Modal Imaging Platform for the Study of Dynamics in Complex Urban Systems

We describe an “Urban Observatory” facility designed for the study of complex urban systems via persistent, synoptic, and granular imaging of dynamical processes in cities. An initial deployment of the facility has been demonstrated in New York City and consists of a suite of imaging systems—both broadband and hyperspectral—sensitive to wavelengths from the visible (∼400 nm) to the infrared (∼13 micron) operating at cadences of ∼0.01–30 Hz (characteristically ∼0.1 Hz). Much like an astronomical survey, the facility generates a large imaging catalog from which we have extracted observables (e.g., time-dependent brightnesses, spectra, temperatures, chemical species, etc.), collecting them in a parallel source catalog. We have demonstrated that, in addition to the urban science of cities as systems, these data are applicable to a myriad of domain-specific scientific inquiries related to urban functioning including energy consumption and end use, environmental impacts of cities, and patterns of life and public health. We show that an Urban Observatory facility of this type has the potential to improve both a city’s operations and the quality of life of its inhabitants.

54 ENVIRONMENTAL SCIENCES↗

A Cryogenic readout integrated circuit with analog pile-up and in-Pixel ADC for high frame rate Skipper CCD-in-CMOS Sensors

The Skipper CCD-in-CMOS Parallel Read-Out Circuit V2 (SPROCKET2) is designed to enable high frame rate readout of Skipper CCD-in-CMOS image sensors. The SPROCKET2 pixel is fabricated in a 65 nm CMOS process and occupies a 60$\mu$m $\times$ 60$\mu$m footprint. SPROCKET2 is intended to be heterogeneously integrated with a pixelated Skipper CCD-in-CMOS sensor, such that one readout pixel is connected to a multiplexed array of 16 active image sensor pixels, to match their spatial geometry. Our design benefits from the Skipper CCD-in-CMOS sensor's non-destructive readout capability to achieve exceptionally low noise through multi-sampling and averaging while optimizing for total power consumption. The pixel readout utilizes correlated double sampling to minimize 1/f noise and includes "pile-up" of ten successive samples in the analog domain before digitizing at a rate of 66.7 ksps. Measurement results of in-pixel serial SAR ADC show DNL and INL of ~0. 44 LSB and 0.58 LBS respectively. A large area array of 20,000 SPROCKET2 ADC pixels (multiplexed 1:16 to 320,000 sensor pixels) is currently under test. By reading out data over a 10 Gbps optical link, this pixel design enables a frame rate of $\sim$ 4 kfps for large sensing areas with minimal sensing deadtime. In the highest gain mode, the pixelated ADC has an input-referred resolution of 10$\mu$V with a simulated power consumption of 50$\mu$W. The pixel operates with constant current draw to minimize power-rail crosstalk.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Scaling Resolution of Gigapixel Whole Slide Images Using Spatial Decomposition on Convolutional Neural Networks

Gigapixel images are prevalent in scientific domains ranging from remote sensing, and satellite imagery to microscopy, etc. However, training a deep learning model at the natural resolution of those images has been a challenge in terms of both, overcoming the resource limit (e.g. HBM memory constraints), as well as scaling up to a large number of GPUs. In this paper, we trained Residual neural Networks (ResNet) on 22,528 x 22,528-pixel size images using a distributed spatial decomposition method on 2,304 GPUs on the Summit Supercomputer. We applied our method on a Whole Slide Imaging (WSI) dataset from The Cancer Genome Atlas (TCGA) database. WSI images can be in the size of 100,000 x 100,000 pixels or even larger, and in this work we studied the effect of image resolution on a classification task, while achieving state-of-the-art AUC scores. Moreover, our approach doesn't need pixel-level labels, since we're avoiding patching from the WSI images completely, while adding the capability of training arbitrary large-size images. This is achieved through a distributed spatial decomposition method, by leveraging the non-block fat-tree interconnect network of the Summit architecture, which enabled GPU-to-GPU direct communication. Finally, detailed performance analysis results are shown, as well as a comparison with a data-parallel approach when possible.

Tsaris, Aristeidis (aris)↗

Broadband unidirectional visible imaging using wafer-scale nano-fabrication of multi-layer diffractive optical processors

We present a broadband and polarization-insensitive unidirectional imager that operates at the visible part of the spectrum, where image formation occurs in one direction, while in the opposite direction, it is blocked. This approach is enabled by deep learning-driven diffractive optical design with wafer-scale nano-fabrication using high-purity fused silica to ensure optical transparency and thermal stability. Our design achieves unidirectional imaging across three visible wavelengths (covering red, green, and blue parts of the spectrum), and we experimentally validated this broadband unidirectional imager by creating high-fidelity images in the forward direction and generating weak, distorted output patterns in the backward direction, in alignment with our numerical simulations. This work demonstrates wafer-scale production of diffractive optical processors, featuring 16 levels of nanoscale phase features distributed across two axially aligned diffractive layers for visible unidirectional imaging. This approach facilitates mass-scale production of ~0.5 billion nanoscale phase features per wafer, supporting high-throughput manufacturing of hundreds to thousands of multi-layer diffractive processors suitable for large apertures and parallel processing of multiple tasks. Beyond broadband unidirectional imaging in the visible spectrum, this study establishes a pathway for artificial-intelligence-enabled diffractive optics with versatile applications, signaling a new era in optical device functionality with industrial-level, massively scalable fabrication.

36 MATERIALS SCIENCE↗

Pillars of Cloud-Based Earth Observation Science Education

Earth observation (EO) is undergoing a paradigm shift with the development of cloud-based analytical platforms supporting EO data collection and access, parallel processing, easier communication of results, and expanded accessibility. As the global community of users and the diversity of applications grow, there is a clear need for expanded educational capacity to leverage these developments and increase the impact of EO research and teaching. Drawing upon extensive conversations between educators, practitioners, and researchers, we propose three pillars that must be prioritized to prepare students, researchers, and professionals to take full advantage of the cloud-based EO paradigm and guide future growth.

97 MATHEMATICS AND COMPUTING↗

Singlet fission for quantum information and quantum computing: the parallel JDE model

Abstract Singlet fission is a photoconversion process that generates a doubly excited, maximally spin entangled pair state. This state has applications to quantum information and computing that are only beginning to be realized. In this article, we construct and analyze a spin-exciton hamiltonian to describe the dynamics of the two-triplet state. We find the selection rules that connect the doubly excited, spin-singlet state to the manifold of quintet states and comment on the mechanism and conditions for the transition into formally independent triplets. For adjacent dimers that are oriented and immobilized in an inert host, singlet fission can be strongly state-selective. We make predictions for electron paramagnetic resonance experiments and analyze experimental data from recent literature. Our results give conditions for which magnetic resonance pulses can drive transitions between optically polarized magnetic sublevels of the two-exciton states, making it possible to realize quantum gates at room temperature in these systems.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Proximity Ferroelectricity in Compositionally Graded Structures

Proximity ferroelectricity is a novel paradigm for inducing ferroelectricity in a non-ferroelectric polar material, such as AlN or ZnO that are typically unswitchable with an external field below their dielectric breakdown field. When placed in direct contact with a thin switchable ferroelectric layer (such as Al 1-x Sc x N or Zn 1-x Mg x O), they become a practically switchable ferroelectric. Using the thermodynamic Landau-Ginzburg-Devonshire theory, in this work, we perform the finite element modeling of the polarization switching in the compositionally graded AlN-Al 1-x Sc x N, ZnO-Zn 1-x Mg x O, and MgO-Zn 1-x Mg x O structures sandwiched in both a parallel-plate capacitor geometry as well as in a sharp probe-planar electrode geometry. We reveal that the compositionally graded structure allows the simultaneous switching of spontaneous polarization in the whole system by a coercive field significantly lower than the electric breakdown field of unswitchable polar materials. The physical mechanism is the depolarization electric field determined by the gradient of chemical composition “x”. The field lowers the steepness of the switching barrier in the otherwise unswitchable parts of the compositionally graded AlN-Al 1-x Sc x N and ZnO-Zn 1-x Mg x O structures. In the MgO-like regions of the compositionally graded MgO-Zn 1-x Mg x O structure, a shallow double-well free energy potential emerges. Proximity ferroelectric switching of the compositionally graded structures placed in the probe-electrode geometry occurs due to nanodomain formation under the tip. We predict that a gradient of chemical composition “x” significantly lowers effective coercive fields of the compositionally graded AlN-Al 1-x Sc x N and ZnO-Zn 1-x Mg x O structures compared to the coercive fields of the corresponding multilayers with a uniform chemical composition in each layer. A tip-induced switching further lowers the coercive field, enabling control of ferroelectric domains in otherwise unswitchable compositionally graded structures, which can provide nanoscale domain control for memory, actuation, sensing, and optical applications.

36 MATERIALS SCIENCE↗

Final Technical Report: The Incubation of Next-Generation Radar Technologies to Lower the Cost of Wind Energy

The National Wind Institute (NWI) at Texas Tech University (TTU) has had an impressive and well documented 46-year history of wind related research activities (http://www.depts.ttu.edu/nwi/). In 2011 with funding from the United States Department of Energy (DOE), an NWI team applied radar technologies and techniques to document the complex flows occurring across a wind plant. The resulting efforts yielded measurements that exceeded the capabilities of commercial lidar technologies with respect to maximum range, range resolution and scan speed. The NWI team was also the first to apply dual-Doppler synthesis and objective analysis techniques to resolve the full horizontal wind field (i.e. not just the line-of-sight wind speeds) to successfully define turbine inflow and wake flows across large segments of wind plants. While these successes advanced wind energy interests, the existing research radar platforms were designed to serve a diversity of meteorological applications, not specifically wind energy. Because of this broader focus and the design choices made during their development, the existing radars experienced technical limitations that inhibited their commercial viability and wide spread adoption. This DOE project enabled the development of a new radar prototype specifically designed for the purpose of documenting wind farm complex flows. Relative to other “off the shelf” radar technologies, the specialized transmitter and receiver chains were specifically designed to enhance data availability in non-precipitating atmospheres. The new radar prototype was integrated at TTU using components from various suppliers across the world, and installed at the Reese Technology Center in May 2016. Following installation, functionality and performance testing were completed, and subsequent comparative analysis indicated that the new prototype greatly enhances data availability by a factor of 3.5-50 in almost all atmospheric conditions. The new prototype also provided enhanced signal quality in clear air (i.e. non-precipitating) environments, mitigated atmospheric attenuation, and extended the useful range of data collection to beyond 30km in cooperative atmospheric conditions. Additionally, the new DOE-X prototype appears to benefit from Bragg scattering when the thermal stratification of the atmosphere is strong (i.e. nocturnal hours). This result was not possible in any capacity with the previous technology. Combined, these developments represent the achievement of all project objectives, advance the Technical Readiness Level (TRL) to a level of 7, and open the door for more widespread adoption and usage in the wind energy sector. At the same time, radar induced artifacts from multi-trip echoes and ground targets increased with the new technology, and these required additional attention for some applications. Commercialization activity accelerated in parallel with the DOE funded project, as SmartWind Technologies, L.L.C., was contracted to provide two new radar systems to DONG Energy to monitor the Westermost Rough wind plant off the east coast of the United Kingdom. These new early stage commercial radars systems were closely related to the DOE prototype, but maintain more robust ancillary support systems. The radars were installed during the summer of 2016, and have been operational since that time. Additionally, commercially funded advancements have since been made in processing sophistication to mitigate the previously identified radar artifacts. TTU and SmartWind Technologies stand ready to provide public and private partners focused on wind plant optimization with this new capability. Ancillary interests have also been identified as the initial deployments of the technology have shown the ability to identify and track avian and drone activity, opening up multi-purpose operational opportunities.

17 WIND ENERGY↗

Morphologies of ∼190,000 galaxies at z = 0–10 revealed with HST legacy data. I. size evolution

We present the redshift evolution of the galaxy effective radius r{sub e} obtained from the Hubble Space Telescope (HST) samples of ∼190,000 galaxies at z = 0–10. Our HST samples consist of 176,152 photo-z galaxies at z = 0–6 from the 3D-HST+CANDELS catalog and 10,454 Lyman break galaxies (LBGs) at z = 4–10 identified in the Cosmic Assembly Near-infrared Deep Extragalactic Legacy Survey (CANDELS), HUDF 09/12, and HFF parallel fields, providing the largest data set to date for galaxy size evolution studies. We derive r{sub e} with the same technique over the wide redshift range of z = 0–10, evaluating the optical-to-UV morphological K correction and the selection bias of photo-z galaxies+LBGs as well as the cosmological surface-brightness dimming effect. We find that r{sub e} values at a given luminosity significantly decrease toward high z, regardless of statistics choices (e.g., r{sub e}∝(1+z){sup −1.10±0.06} for median). For star-forming galaxies, there is no evolution of the power-law slope of the size–luminosity relation and the median Sérsic index (n∼1.5). Moreover, the r{sub e} distribution is well represented by log-normal functions whose standard deviation σ{sub lnr{sub e}} does not show significant evolution within the range of σ{sub lnr{sub e}}∼0.45−0.75. We calculate the stellar-to-halo size ratio from our r{sub e} measurements and the dark-matter halo masses estimated from the abundance-matching study, and we obtain a nearly constant value of r{sub e}/r{sub vir}=1.0%−3.5% at z = 0–8. The combination of the r{sub e}-distribution shape+standard deviation, the constant r{sub e}/r{sub vir}, and n∼1.5 suggests a picture in which typical high-z star-forming galaxies have disk-like stellar components in a sense of dynamics and morphology over cosmic time of z∼0−6. If high-z star-forming galaxies are truly dominated by disks, the r{sub e}/r{sub vir} value and the disk-formation model indicate that the specific angular momentum of the disk normalized by the host halo is j{sub d}/m{sub d}≃0.5−1. These are statistical results for major stellar components of galaxies, and the detailed study of clumpy subcomponents is presented in the paper II.

79 ASTRONOMY AND ASTROPHYSICS↗

Advanced sorbents for modular oxygen production for REMS gasifiers

Under a DOE funded effort, Thermosolv LLC has been developing a sorbent-based oxygen production technology for gasification and oxy-combustion applications. The sorbents utilize oxygen-storage properties of certain perovskites to (1) selectively adsorb oxygen at moderate temperature from compressed air and (2) release the adsorbed oxygen into a vacuum or a sweep gas such as CO2 and/or steam. Through cyclic operations of multiple sorbent beds such a process can be made continuous. Pressure drop across the sorbent bed and other similar design considerations dictate that the sorbent be in the form of a high surface-area-to-volume pellet and yet still possess sufficient crush strength and integrity. Process efficiency is determined by the sorption and desorption kinetics and sorbent capacity. Typical process involves cycle times in the order of 100 seconds, a time too short to fully utilize the full volume of the sorbent and the sorption capacity of the sorbent pellets. As a part of this project, Thermosolv LLC undertook the development of oxygen sorbents as a high-surface area supported sorbent on a light-weight inert support to (1) reduce the cost, (2) increase the productivity, and (3) reduce the overall weight of the reactor. Using a previously developed perovskite (LSCF 1991) with its well-characterized performance, composite sorbent pellets each consisting of an inert core coated by a thin layer of the functional perovskite material were produced. Several low-density, inexpensive inert solids supports in the 1/8”-1/4” size were selected to keep the pressure drop across the sorbent bed in the acceptable range. A number of commercial technologies including spray coating, dip coating, incipient impregnation of porous substrate followed by thermal annealing at various temperatures and duration were employed and tested to produce robust composite supported sorbent pellets. A sense of optimum coating thickness was developed by testing sorbent pellets of various increasing diameter pellets. LSCF-1991extrudates ranging in size from 1/32” to 3/16” were tested in a TGA and in a fixed-bed pressure swing test set-up for sorption/desorption cycles of interest. The data show that for the operational conditions of interest the coating thickness for a supported sorbent pellet needs to be approximately 1/32” (about 0.8 mm). Subsequent work thereby concentrated on developing composite pellets of various substrates, shapes and sizes with coating layer of about this size range. Candidate support materials were chosen based on cost, inertness, mechanical strength, thermal expansion and chemical stability with sorbent material, and in a size range to give an acceptable pressure drop in fixed-bad reactor configurations. Coating application methods used for application of the sorbent onto the support included precipitation, spray coating and dip coating from sorbent slurries and sol gels. For all coated supports where we could successfully apply a uniform coating of desired thickness with an acceptable handling performance in terms of exfoliation, TGA-based cyclic sorption/desorption testing was performed to determine cycling capacity of oxygen. Among nearly twenty different support materials tested, best adhesion performance was obtained from stainless saddle supports. In the bench-scale fixed-bad tests stainless steel saddle support composite pellets with a coating thickness in the 0.6 mm or so range, the composite sorbent pellet performance approached up to 95% of that of the 2 mm parent material pellets. In a parallel approach to reducing the cost of the sorbent, alternate sorbent formulations replacing/reducing the amount of cobalt in the LSCF family were also investigated. Successful formulations that could match the performance of LSCF 1991 were identified based on TGA cyclic tests as LSCF 1919 and LSF 1910. In the range of operational envelop of cycle times and other relevant process operating conditions, the reduced Co formulations showed comparable performance in the bench-scale fixed-bad cyclic operations. As a part of this project, we also attempted substitution of La and Sr with Ca and Ba, and Co with Mn, Ni and Cu with little success, but the overall project goal of reducing sorbent cost in terms of raw material and manufacturing expenses was successful.

01 COAL, LIGNITE, AND PEAT↗

Nutrient Cycle Impacts on Forest Ecosystem Carbon Cycling: Improved Prediction of Climate Feedbacks from Coupled C–Nutrient Dynamics from Ecosystem to Regional Scales

One of the largest sources of uncertainty in the projected global mean temperature response to anthropogenic carbon (C) emissions is the role of the land surface in contributing to or mediating the rise in atmospheric CO2 [IPCC, 2007]. Development of ecosystem processes in global land surface models (LSMs) is far from complete, with major components such as the nitrogen (N) cycle only recently being implemented in some LSMs [Thornton et al., 2007; Sokolov et al., 2008; Xu-Ri and Prentice, 2008; Fisher et al., 2010]. Inclusion of the N cycle can reduce terrestrial C uptake by up to ~50 Pg C·y-1 globally [Figure 1: Fisher et al., 2010]. However, even these early representations of the N cycle in LSMs are missing critical plant–soil interactions that have been shown empirically to exert a major influence over ecosystem C fluxes. Here we propose to use a newly developed plant N model by PI Fisher as a theoretical and analytical framework for integrating novel field-based methods and long-term flux observations to quantify the impacts of belowground processes on fluxes of C, water and energy, from ecosystem to regional scales. Although the model (Fixation & Uptake of Nitrogen: FUN) is one of the more advanced global plant N models available, the model is dependent on theoretical C flux curves optimizing plant C allocation to root exudates, symbiotic bacteria and fungi, and retranslocation enzymes that have not been confirmed or validated with measurements—primarily because the measurement techniques had not been available, until recently. Parallel to the model developments by Fisher et al. were developments in in situ direct measurement techniques by Phillips et al. [2008; 2011], who were able to measure C fluxes from roots to soil. Not only do these techniques have the capacity to confirm and/or modify the modeling components in the Fisher et al. plant N model, but they also provide insight into how belowground C supply from roots couples the C–N cycles at the micro-site and ecosystem scales. Collectively, the integration of measurements and modeling provides empirical grounding for theoretical process behavior. Three critical components will enable us to successfully carry out this research: I) new methodological approaches developed by co-I Phillips for in situ measurement of root exudates, and belowground C fluxes that allow for testing and refinement of FUN [Phillips et al., 2008; Phillips et al., 2011]; II) an innovative research design that involves data integration across an ecological gradient, including a DOE-supported AmeriFlux tower operated by co-I Dragoni, which is essential to determining the ecosystem flux impacts [Dragoni et al., 2011]; and, III) new results from co-I Evans showing unique spectral signatures of trees in association with ectomycorrhizae (ECM) and arbuscular mycorrhizae (AM) fungi from Landsat data using spectral mixture analysis (SMA), which is key to scaling up belowground processes to regional scales [Andersson et al., 2009]. Each component provides feedback to and is intimately linked with all other components; no part operates in isolation. Our team and approach combines expertise in modeling, remote sensing, ecosystem ecology, plant physiology, soil biogeochemistry, and micrometeorology to address these inherently interdisciplinary problems and questions. This proposal directly responds to the focused Science Area of the FOA: “The role of belowground processes and mechanisms across scales (e.g., soil carbon transformation, root dynamics, mycorrhizal interactions, and plant mediated (e.g., root exudates) biogeochemical transformations) associated with a changing climate.

54 ENVIRONMENTAL SCIENCES↗

Electric current paths in a Si:P delta-doped device imaged by nitrogen-vacancy diamond magnetic microscopy

The recently-developed ability to control phosphorous-doping of silicon at an atomic level using scanning tunneling microscopy, a technique known as atomic precision advanced manufacturing (APAM), has allowed us to tailor electronic devices with atomic precision, and thus has emerged as a way to explore new possibilities in Si electronics. In these applications, critical questions include where current flow is actually occurring in or near APAM structures as well as whether leakage currents are present. In general, detection and mapping of current flow in APAM structures are valuable diagnostic tools to obtain reliable devices in digital-enhanced applications. In this report, we used nitrogen-vacancy (NV) centers in diamond for wide-field magnetic imaging (with a few-mm field of view and micron-scale resolution) of magnetic fields from surface currents flowing in an APAM test device made of a P delta-doped layer on a Si substrate, a standard APAM witness material. We integrated a diamond having a surface NV ensemble with the device (patterned in two parallel mm-sized ribbons), then mapped the magnetic field from the DC current injected in the APAM device in a home-built NV wide-field microscope. The 2D magnetic field maps were used to reconstruct the surface current densities, allowing us to obtain information on current paths, device failures such as choke points where current flow is impeded, and current leakages outside the APAM-defined P-doped regions. Analysis on the current density reconstructed map showed a projected sensitivity of ~0.03 A m -1 , corresponding to a smallest-detectable current in the 200 μm wide APAM ribbon of ~6 μA. These results demonstrate the failure analysis capability of NV wide-field magnetometry for APAM materials, opening the possibility to investigate other cutting-edge microelectronic devices.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

Three-Dimensional Surface Downwelling Longwave Radiation Clear-Sky Effects in the Upper Colorado River Basin

In complex terrain, non-parallel surfaces receive emitted radiation from adjacent surfaces. Qualitatively, where surface skin temperatures and lower tropospheric temperature and humidity are not uniform, the downwelling longwave radiation (DLR) will be determined not just by radiation from the atmosphere above a given location, but also by adjacent surface temperatures. We quantify this three-dimensional longwave radiative effect over the Upper Colorado River Basin in clear-sky conditions by calculating surface DLR with observed land-surface temperatures from ECOSTRESS. We find that this effect is due to terrain-subtended sky-view and represents ~22% of the surface longwave flux, rising to ~28% and ~24% in the East and Southeast of the Basin, respectively, and can be >50% in extreme cases. The common omission of this effect in atmospheric radiation models leads to an underestimation of DLR in complex terrain, especially at higher elevations, which has significant implications for mountainous ecohydrology simulations.

3-dimensional effects↗

Microbial sensor variation across biogeochemical conditions in the terrestrial deep subsurface

ABSTRACT Microbes can be found in abundance many kilometers underground. While microbial metabolic capabilities have been examined across different geochemical settings, it remains unclear how changes in subsurface niches affect microbial needs to sense and respond to their environment. To address this question, we examined how microbial extracellular sensor systems vary with environmental conditions across metagenomes at different Deep Mine Microbial Observatory (DeMMO) subsurface sites. Because two-component systems (TCSs) directly sense extracellular conditions and convert this information into intracellular biochemical responses, we expected that this sensor family would vary across isolated oligotrophic subterranean environments that differ in abiotic and biotic conditions. TCSs were found at all six subsurface sites, the service water control, and the surface site, with an average of 0.88 sensor histidine kinases (HKs) per 100 genes across all sites. Abundance was greater in subsurface fracture fluids compared with surface-derived fluids, and candidate phyla radiation (CPR) bacteria presented the lowest HK frequencies. Measures of microbial diversity, such as the Shannon diversity index, revealed that HK abundance is inversely correlated with microbial diversity ( r 2 = 0.81). Among the geochemical parameters measured, HK frequency correlated most strongly with variance in dissolved organic carbon ( r 2 = 0.82). Taken together, these results implicate the abiotic and biotic properties of an ecological niche as drivers of sensor needs, and they suggest that microbes in environments with large fluctuations in organic nutrients (e.g., lacustrine, terrestrial, and coastal ecosystems) may require greater TCS diversity than ecosystems with low nutrients (e.g., open ocean). IMPORTANCE The ability to detect extracellular environmental conditions is a fundamental property of all life forms. Because microbial two-component sensor systems convert information about extracellular conditions into biochemical information that controls their behaviors, we evaluated how two-component sensor systems evolved within the deep Earth across multiple sites where abiotic and biotic properties vary. We show that these sensor systems remain abundant in microbial consortia at all subterranean sampling sites and observe correlations between sensor system abundances and abiotic (dissolved organic carbon variation) and biotic (consortia diversity) properties. These results suggest that multiple environmental properties may drive sensor protein evolution and highlight the need for further studies of metagenomic and geochemical data in parallel to understand the drivers of microbial sensor evolution.

response regulator↗

Portable COTS RGB Wavefront System for Real-time Turbulence Mitigation

Atmospheric effects reduce the ability to detect or identify objects of interest due to spatial and spectral scintillation. Algorithms alone cannot correct for turbulence over long-range horizontal paths. While adaptive optics methods work well for astronomical viewing, they are not readily adapted for complex imagery over long-range horizontal paths. At MSS Parallel in 2016, we presented our work for the red/green/blue (RGB) wavefront sensor. Since then, we have completed our system to combine an off-the-shelf high-frame-rate USB3 color camera with a compact 90 mm Maksutov-Cassegrain telescope and an OKO deformable mirror (DM) to create a portable, real-time RGB wavefront sensor and turbulence mitigation system. The telescope’s aperture is covered with an aluminum plate holding three separate narrowband color filters. These filters, specifically matched to the relative spectral response of the sensor’s Bayer mask, provide nearly complete separation of the three color images. This device enables portable imaging through atmospheric turbulence and analysis thereof, where relative motion of the three-color Bayer-pixel video provides real-time wavefront information on the second-order statistics of Kolmogorov turbulence. We measured relative RGB pixel shifts and controlled this mirror using an ODROID single-board computer. We developed a bench setup to calibrate the relationship between pixel shifts and the deformable mirror actuators. We demonstrated the feasibility of this system on a benchtop and on scenes at 700 meters showing real time correction.

47 OTHER INSTRUMENTATION↗

Entanglement-enhanced ac magnetometry in the presence of Markovian noise

Entanglement is a resource to improve the sensitivity of quantum sensors. In an ideal case, using an entangled state as a probe to detect target fields, we can beat the standard quantum limit by which all classical sensors are bounded. However, since entanglement is fragile against decoherence, it is unclear whether entanglement-enhanced metrology is useful in a noisy environment. Its benefit is indeed limited when estimating the amplitude of dc magnetic fields under the effect of parallel Markovian decoherence, where the noise operator is parallel to the target field. In this paper, on the contrary, we show an advantage to using an entanglement over the classical strategy under the effect of parallel Markovian decoherence when we try to detect ac magnetic fields. We consider a scenario to induce a Rabi oscillation of the qubits with the target ac magnetic fields. Although we can, in principle, estimate the amplitude of the ac magnetic fields from the Rabi oscillation, the signal becomes weak if the qubit frequency is significantly detuned from the frequency of the ac magnetic field. We show that, by using the Greenberger-Horne-Zeilinger (GHZ) states, we can significantly enhance the signal of the detuned Rabi oscillation even under the effect of parallel Markovian decoherence. Further, our method is based on the fact that the interaction time between the GHZ states and ac magnetic fields scales as 1/L to mitigate the decoherence effect, where L is the number of qubits, which contributes to improving the bandwidth of the detectable frequencies of the ac magnetic fields. Our results pave the way for new applications of entanglement-enhanced ac magnetometry.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗