What Remains Challenging to Simulate Historical Ocean Deoxygenation?
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Marine renewable energy (MRE) harnesses energy from the ocean and provides a low-carbon sustainable energy source for national grids and remote uses. The international MRE industry is in the early stages of development, focused largely on tidal and riverine turbines, and wave energy converters (WECs), to harness energy from tides, rivers, and waves, respectively. Although MRE supports climate change mitigation, there are concerns that MRE devices and systems could affect portions of the marine and river environments. The greatest concern for tidal and river turbines is the potential for animals to be injured or killed by collision with rotating blades. Other risks associated with MRE device operation include the potential for turbines and WECs to cause disruption from underwater noise emissions, generation of electromagnetic fields, changes in benthic and pelagic habitats, changes in oceanographic processes, and entanglement of large marine animals. The accumulated knowledge of interactions of MRE devices with animals and habitats to date is summarized here, along with a discussion of preferred management methods for encouraging MRE development in an environmentally responsible manner. As there are few devices in the water, understanding is gained largely from examining one to three MRE devices. This information indicates that there will be no significant effects on marine animals and habitats due to underwater noise from MRE devices or emissions of electromagnetic fields from cables, nor changes in benthic and pelagic habitats, or oceanographic systems. Ongoing research to understand potential collision risk of animals with turbine blades still shows significant uncertainty. There has been no significant field research undertaken on entanglement of large animals with mooring lines and cables associated with MRE devices.
Sea ice modulates the energy exchange between the atmosphere and the ocean through its kinematics. Marginal ice zone (MIZ) dynamics are complex and are not well resolved in routine observations. Here, we investigate sea ice dynamics in the Greenland Sea MIZ using in situ and remote sensing Lagrangian drift datasets. These datasets provide a unique view into ice dynamics spanning spatial scales. We find evidence of tidal currents strongly affecting sub-daily ice motion. Velocity anomalies show abrupt transitions aligned with gradients in seafloor topography, indicating changes in ocean currents. Remote-sensed ice floe trajectories derived from moderate resolution satellite imagery provide a view of small-scale variability across the Greenland continental shelf. Ice floe trajectories reveal a west-east increasing velocity gradient imposed by the East Greenland Current, with maximum velocities aligned along the continental shelf edge. These results highlight the importance of small scale ocean variability for ice dynamics in the MIZ.
This is the Final Report of our 4-year Energy Exascale Earth System Model (E3SM) project (3 years for the original project + 1-year no-cost extension). The overall objective of our project is to improve the interface processes in the E3SM. Two overarching questions have been addressed: 1) What are the major deficiencies of the (land-atmosphere, ocean-atmosphere, land-ocean, and snow-sea ice) interface processes in E3SM? 2) How can we improve the treatment of these deficiencies in E3SM? Four tasks have been carried out: to evaluate and improve the land–atmosphere coupling in E3SM; to evaluate and improve the ocean–atmosphere coupling in E3SM; to evaluate and improve the land–ocean coupling in E3SM; and to evaluate and improve the snow–sea ice coupling in E3SM.
We discuss several issues raised by Comrie (2021, https://doi.org/10.1029/2021GH000504), which uses a crowdsourced data set to study dust storms and coccidioidomycosis (Valley fever). There is inconsistency in the term “dust storm” used by science communities. The dust data from National Oceanic and Atmospheric Administration Storm Events Database are from diverse sources, unsuitable for assessing dust-coccidioidomycosis relationships. Population exposure to dust or Coccidioides needs to consider the frequency, magnitude, and duration of dust events. Given abundant evidence that dust storms are a viable driver to transport pathogens, it is in best public interest to advocate dust storms may put people at risk for contracting Valley fever.
Abstract Terrestrial, aquatic, and marine ecosystems regulate climate at local to global scales through exchanges of energy and matter with the atmosphere and assist with climate change mitigation through nature‐based climate solutions. Climate science is no longer a study of the physics of the atmosphere and oceans, but also the ecology of the biosphere. This is the promise of Earth system science: to transcend academic disciplines to enable study of the interacting physics, chemistry, and biology of the planet. However, long‐standing tension in protecting, restoring, and managing forest ecosystems to purposely improve climate evidences the difficulties of interdisciplinary science. For four centuries, forest management for climate betterment was argued, legislated, and ultimately dismissed, when nineteenth century atmospheric scientists narrowly defined climate science to the exclusion of ecology. Today's Earth system science, with its roots in global models of climate, unfolds in similar ways to the past. With Earth system models, geoscientists are again defining the ecology of the Earth system. Here we reframe Earth system science so that the biosphere and its ecology are equally integrated with the fluid Earth to enable Earth system prediction for planetary stewardship. Central to this is the need to overcome an intellectual heritage to the models that elevates geoscience and marginalizes ecology and local land knowledge. The call for kilometer‐scale atmospheric and ocean models, without concomitant scientific and computational investment in the land and biosphere, perpetuates the geophysical view of Earth and will not fully provide the comprehensive actionable information needed for a changing climate.
Here, this article presents a collaborative research campaign under the OC7 project on refining the engineering modeling approach for hydrodynamic viscous drag and damping on floating wind platforms, focusing on the adjustment of hydrodynamic drag and damping coefficients for different sea states. The participant simulation results show significant improvements over the previous OC6 project in predicting the low-frequency resonance motion under nonoperational conditions. The improvements are mainly due to enhanced modeling, including the adoption of wave stretching, and directly tuning the coefficients to measured platform motion in waves instead of free decay. For accurate predictions of mean- and slow-drift motion, the better performing models use a decreasing column splash zone drag coefficient and increasing surge damping/drag with increasing wave height. The model tuning for heave and pitch resonance shows less consistency. Generally, both quadratic drag and additional heave or pitch damping are needed for accurate predictions. Alternatively, a quadratic drag formulation with velocity filtering for the rectangular pontoons leads to improved predictions without additional damping. This model is also potentially more predictive, requiring minimal adjustment to its parameters for different conditions.
Marine stratocumulus clouds play a central role in Earth's climate system by reflecting incoming solar radiation and exerting a strong cooling effect. Their organization into open and closed mesoscale cellular morphologies can be thought of as an example of bistable dynamics driven by aerosol–cloud interactions and mesoscale processes. From the perspective of non-equilibrium thermodynamics, these structures are an example of a far-from-equilibrium open system that continuously produces and exports entropy. While entropy production has been studied in idealized deep convective systems, it has not yet been quantified for shallow clouds. Here, we compute and decompose the internal entropy production of open- and closed-cell stratocumulus using an ensemble of large-eddy simulations. We show that the overall entropy production of stratocumulus is low, reflecting the limited vertical extent and corresponding reduced ability to utilize the energy fluxes at the system's boundaries. Moist processes dominate the overall irreversibility, which, combined with their low entropy production, leads to a mechanical efficiency about an order of magnitude smaller than in deep convective systems. Although the dominant irreversible processes differ between open- and closed-cell regimes, the distributions of total entropy production largely overlap across the ensemble, limiting the ability to distinguish the dynamics of individual cases based solely on total entropy production.
Abstract Sea‐level rise (SLR) poses a severe threat to the coastal environment through seawater intrusion into freshwater aquifers. The rising groundwater table also exacerbates the risk of pluvial, fluvial, and groundwater flooding in coastal regions. However, current Earth system models (ESMs) commonly ignore the exchanges of water at the land‐ocean interface. To address this gap, we developed a novel land‐ocean hydrologic coupling scheme in a state‐of‐the‐science ESM, the Energy Exascale Earth System Model version 2 (E3SMv2). The new scheme includes the lateral exchange between seawater and groundwater and the vertical infiltration of seawater driven by the SLR‐induced inundation. Simulations were performed with the updated E3SMv2 for the global land‐ocean interface to assess the impacts of SLR on coastal groundwater under a high CO 2 emission scenario. By the middle of this century, seawater infiltration on the inundated areas will be the dominant component in the land‐ocean coupling process, while the lateral subsurface flow exchange will be much smaller. The SLR‐induced seawater infiltration will raise the groundwater levels, enhance evapotranspiration, and increase runoff with distinct spatial patterns globally in the future. Although the coupling process is induced by SLR, we found topography and warming temperature have more control on the coupling impacts, probably due to the relatively modest magnitude of SLR during the selected future period. Overall, our study suggests significant groundwater and seawater exchange at the land‐ocean interface, which needs to be considered in ESMs.
Ocean bathymetry exerts a strong control on ice sheet-ocean interactions within Antarctic ice-shelf cavities, where it can limit the access of warm, dense water at depth to the underside of floating ice shelves. However, ocean bathymetry is challenging to measure within or close to ice-shelf cavities. It remains unclear how uncertainty in existing bathymetry datasets affect simulated sub-ice-shelf melt rates. In this work, we infer linear sensitivities of ice-shelf melt rates to bathymetric shape with grid-scale detail by means of the adjoint of an ocean general circulation model. Both idealized and realistic-geometry experiments of sub-ice-shelf cavities in West Antarctica reveal that bathymetry has a strong impact on melt in localized regions such as topographic obstacles to flow. Moreover, response of melt to bathymetric perturbation is found to be non-monotonic, with deepening leading to either increased or decreased melt depending on location. Our computational approach provides a comprehensive way of identifying regions, where refined knowledge of bathymetry is most impactful, and also where bathymetric errors have relatively little effect on modeled ice sheet-ocean interactions.
The primary goal of this project was to understand the role of the ocean and sea-ice components in the evolution of the climate in both a high-resolution fully-coupled 1850 preindustrial control and present day transient climate simulations run using the Energy Exascale Earth System Model (E3SM), formerly known as the Accelerated Climate Model for Energy (ACME). Two distinct approaches to the initialization of the present day transients were tested: in the first, an ensemble of three transients used atmospheric reanalysis forced 0.1-degree ocean/sea-ice states, while a fourth transient was branched off the preindustrial control. Biases from the control were inherited by its successor transient, in particular, sea surface temperatures (SSTs) at high latitudes were too warm and too much northward meridional heat transport occurred in the North Atlantic Ocean. SSTs in the Northern Hemisphere and Atlantic meridional heat transport increased in the transients initialized from the ocean/sea-ice simulation over a 40-50 year period to largely resemble the transient branched off the control simulation. Excessive absorbed solar radiation (ASR) is considered to be responsible for the SST biases as well as the formation of mode waters in lighter density classes than in reality both in the Southern Ocean and the North Atlantic Ocean subtropical gyre. These mode waters ventilate the thermocline waters to the north of their formation sites explaining the excessive Atlantic meridional heat transport and some of the warming in the high-latitude North Atlantic Ocean after multiple decades.
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The mineralogy and oxidation state of aerosol iron (Fe) play important roles in controlling aerosol Fe solubility and consequent bioavailability in seawater. In this study, the spatial variability of Fe mineralogy and oxidation states in aerosols collected during the US GEOTRACES Western Arctic cruise (GN01) were determined using synchrotronbased X-ray absorption near edge structure (XANES) spectroscopy. Both Fe(II) minerals (biotite, ilmenite) and Fe (III) minerals (ferrihydrite, hematite, Fe(III) phosphate) were found in these samples. However, aerosol Fe mineralogy and solubility observed during this cruise varied spatially and can be grouped into three clusters based on the air masses that affected aerosols collected in different regions: (1) biotite-enriched particles (87 % biotite, 13 % hematite) with the air masses passing over Alaska, showing relatively low Fe solubility (4.0 +/- 1.7 %); (2) ferrihydrite-enriched particles (82 % ferrihydrite, 18 % ilmenite) collected in the remote Arctic air, showing relatively high Fe solubility (9.6 +/- 3.3 %); (3) the fresh dust derived from North America and Siberia, primarily dominated by hematite (41 % hematite, 25 % Fe(III) phosphate, 20 % biotite, 13 % ferrihydrite), showing relatively low Fe solubility (5.1 +/- 3.5). A significant positive correlation was found between Fe oxidation state and Fe fractional solubility, suggesting that long-range transport could modify iron (hydr) oxide such as ferrihydrite through atmospheric processing, influencing aerosol Fe solubility and consequently Fe bioavailability in the remote Arctic Ocean.
Past studies have indicated that El Nino-Southern Oscillation (ENSO) plays a major role in the interannual variability of Eastern Pacific hurricane activity. The primary mechanism being the eastward displacement of the warm pool during an El Nino, which carries warm water into that basin thereby creating favorable oceanic conditions. Despite this, the question of whether an accurate knowledge of ENSO enhances seasonal predictabiity of Eastern Pacific hurricanes has not been addressed specifically. In this study, we show that unlike traditional indices of ENSO, the ENSO Longitude Index (ELI) is able to predict Eastern Pacific hurricane activity at significant lead times. By capturing changes in the location of deep convection and associated thermocline processes more accurately, ELI explains the most variability in the upper-ocean heat content in the main development region of the Eastern Pacific basin compared to other ENSO indices. These results have substantial implications for operational seasonal forecasts of Eastern Pacific hurricanes.
Abstract. Some programming languages are easy to develop at the cost of slow execution, while others are fast at runtime but much more difficult to write. Julia is a programming language that aims to be the best of both worlds – a development and production language at the same time. To test Julia's utility in scientific high-performance computing (HPC), we built an unstructured-mesh shallow water model in Julia and compared it against an established Fortran-MPI ocean model, the Model for Prediction Across Scales–Ocean (MPAS-Ocean), as well as a Python shallow water code. Three versions of the Julia shallow water code were created: for single-core CPU, graphics processing unit (GPU), and Message Passing Interface (MPI) CPU clusters. Comparing identical simulations revealed that our first version of the Julia model was 13 times faster than Python using NumPy, where both used an unthreaded single-core CPU. Further Julia optimizations, including static typing and removing implicit memory allocations, provided an additional 10–20× speed-up of the single-core CPU Julia model. The GPU-accelerated Julia code was almost identical in terms of performance to the MPI parallelized code on 64 processes, an unexpected result for such different architectures. Parallelized Julia-MPI performance was identical to Fortran-MPI MPAS-Ocean for low processor counts and ranges from 2× faster to 2× slower for higher processor counts. Our experience is that Julia development is fast and convenient for prototyping but that Julia requires further investment and expertise to be competitive with compiled codes. We provide advice on Julia code optimization for HPC systems.
Abstract Dissolved organic carbon (DOC) in coastal waters is integral to biogeochemical cycling, but global and regional drivers of DOC are still uncertain. In this study we explored spatial and temporal differences in DOC concentrations and stocks across the global coastal ocean, and how these relate to temperature and salinity. We estimated a global median coastal DOC stock of 3.15 Pg C (interquartile range (IQR) = 0.85 Pg C), with median DOC concentrations being 2.2 times higher than in open ocean surface waters. Globally and seasonally, salinity was the main driver of DOC with concentrations correlated negatively with salinity, without a clear relationship to temperature. DOC concentrations and stocks varied with region and season and this pattern is likely driven by riverine inputs of DOC and nutrients that stimulate coastal phytoplankton production. Temporally, high DOC concentrations occurred mainly in months with high freshwater input, with some exceptions such as in Eastern Boundary Current margins where peaks are related to primary production stimulated by nutrients upwelled from the adjacent ocean. No spatial trend between DOC and temperature was apparent, but many regions (19 out of 25) had aligned peaks of seasonal temperature and DOC, related to increased phytoplankton production and vertical stratification at high temperatures. Links of coastal DOC with salinity and temperature highlight the potential for anthropogenic impacts to alter coastal DOC concentration and composition, and thereby ecosystem status.
Abstract. Oceanic tides are seldom represented in Earth system models (ESMs) owing to the need for high horizontal resolution to accurately represent the associated barotropic waves close to coasts. This paper presents results of tides implemented in the Model for Prediction Across Scales–Ocean or MPAS-Ocean, which is the ocean component within the U.S. Department of Energy developed Energy Exascale Earth System Model (E3SM). MPAS-Ocean circumvents the limitation of low resolution using unstructured global meshing. We are at this stage simulating the largest semidiurnal (M2, S2, N2) and diurnal (K1, O1) tidal constituents in a single-layer version of MPAS-O. First, we show that the tidal constituents calculated using MPAS-Ocean closely agree with the results of the global tidal prediction model TPXO8 when suitably tuned topographic wave drag and bottom drag coefficients are employed. Thereafter, we present the sensitivity of global tidal evolution due to the presence of Antarctic ice shelf cavities. The effect of ice shelves on the amplitude and phase of tidal constituents are presented. Lower values of complex errors (with respect to TPXO8 results) for the M2 tidal constituents are observed when the ice shelf is added in the simulations, with particularly strong improvement in the Southern Ocean. Our work points towards future research with varying Antarctic ice shelf geometries and sea ice coupling that might lead to better comparison and prediction of tides and thus better prediction of sea-level rise and also the future climate variability.
Plankton community models are critical tools for understanding the processes that shape marine plankton communities, how plankton communities impact biogeochemical cycles, and the feedbacks between community structure and function. Here, using the flexible Marine Biogeochemistry Library (MARBL), we present the Size-based Plankton ECological TRAits (MARBL-SPECTRA) model, which is designed to represent a diverse plankton community while remaining computationally tractable. MARBL-SPECTRA is composed of nine phytoplankton and six zooplankton size classes represented using allometric scaling relationships for physiological traits and interactions within multiple functional types. MARBL-SPECTRA is embedded within the global ocean component of the Community Earth System Model (CESM) and simulates large-scale, emergent patterns in phytoplankton growth limitation, plankton phenology, plankton generation time, and trophic transfer efficiency. The model qualitatively reproduces observed global patterns of surface nutrients, chlorophyll biomass, net primary production, and the biogeographies of a range of plankton size classes. In addition, the model simulates how predator:prey dynamics and trophic efficiency vary across gradients in total ecosystem productivity. Shorter food chains that export proportionally more carbon from the surface to the ocean interior occur in productive, eutrophic regions, whereas in oligotrophic regions, the food chains are relatively long and export less organic matter from the surface. The union of functional type modeling with size-resolved, trait-based modeling approaches allows MARBL-SPECTRA to capture both large-scale elemental cycles and the structure of planktonic food webs affecting trophic transfer efficiency.