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DOE OSTI2020

Understanding the Origin of Highly Selective CO 2 Electroreduction to CO on Ni,N‐doped Carbon Catalysts

Abstract Ni,N‐doped carbon catalysts have shown promising catalytic performance for CO 2 electroreduction (CO 2 R) to CO; this activity has often been attributed to the presence of nitrogen‐coordinated, single Ni atom active sites. However, experimentally confirming Ni−N bonding and correlating CO 2 reduction (CO 2 R) activity to these species has remained a fundamental challenge. We synthesized polyacrylonitrile‐derived Ni,N‐doped carbon electrocatalysts (Ni‐PACN) with a range of pyrolysis temperatures and Ni loadings and correlated their electrochemical activity with extensive physiochemical characterization to rigorously address the origin of activity in these materials. We found that the CO 2 R to CO partial current density increased with increased Ni content before plateauing at 2 wt % which suggests a dispersed Ni active site. These dispersed active sites were investigated by hard and soft X‐ray spectroscopy, which revealed that pyrrolic nitrogen ligands selectively bind Ni atoms in a distorted square‐planar geometry that strongly resembles the active sites of molecular metal–porphyrin catalysts.

Koshy, David M.↗

DOE OSTI2024

A Four‐Coordinate Pr 4+ Imidophosphorane Complex

Abstract The imidophosphorane ligand, [NP t Bu 3 ] − ( t Bu= tert ‐butyl), enables isolation of a pseudo‐tetrahedral, tetravalent praseodymium complex, [Pr 4+ (NP t Bu 3 ) 4 ] ( 1‐Pr ), which is characterized by a suite of physical characterization methods including single‐crystal X‐ray diffraction, electron paramagnetic resonance, and L 3 ‐edge X‐ray near‐edge spectroscopies. Variable‐temperature direct‐current magnetic susceptibility data, supported by multiconfigurational quantum chemical calculations, demonstrate that the electronic structure diverges from the isoelectronic Ce 3+ analogue, driven by increased crystal field. The four‐coordinate environment around Pr 4+ in 1‐Pr , which is unparalleled in reported extended solid systems, provides a unique opportunity to study the interplay between crystal field splitting and spin‐orbit coupling in a molecular tetravalent lanthanide within a pseudo‐tetrahedral coordination geometry.

Boggiano, Andrew C.↗

DOE OSTI2024

A Four‐Coordinate Pr 4+ Imidophosphorane Complex

Boggiano, Andrew C.↗

DOE OSTI2021

Simulation of lithium transport using the BOUT++ framework

A numerical model that calculates the collisional interactions between the lithium atoms from a lithium pellet and the background plasmas has been upgraded. The ion density ($N_t$), electron temperature ($T_e$), ion temperature ($T_i$) and parallel ion velocity ($V_{∥, i}$) are used to characterize the background plasmas. The lithium atom density ($N^{a}_{Li}$) and parallel velocity ($V_{∥,a}$) of lithium atoms evolve with time. For each lithium ion, the density ($N_{Li^{n+}}$), temperature ($T_{Li^{n+}}$) and parallel velocity ($V_{∥, Li^{n+}}$) are self-consistently calculated. A C-mod lower single null equilibrium is used to generate the grid for the BOUT++ simulation. The lithium atoms can be fully ionized to $Li^{3+}$ in ~2 μs. The rapid radial and poloidal expansion of the lithium ions are found in the simulation. After the collision interaction process, the electron temperature rapidly decreases at the pellet location; then, it rapidly poloidally expands, and the temperature at the pellet location starts to recover. The electron pressure increases at the pellet location despite the decrease in electron temperature because of the extra electrons from the lithium ionization. The ion pressure profile decreases in the pellet location due to the decrease in ion temperature.

74 ATOMIC AND MOLECULAR PHYSICS↗

DOE OSTI2021

Structural and Spectroscopic Analysis of Ln(II) 18-crown-6 and Benzo-18-crown-6 Complexes (Ln = Sm, Eu, Yb)

Three Ln 2+ 18-crown-6 complexes of the formula Ln(18-crown-6)I 2 (Ln = Sm, Eu, Yb) were isolated from the explicit synthesis of the corresponding LnI 2 salts with 18-crown-6 and tetrabutylammonium tetraphenylborate in organic media under air-free conditions. Each metal complex forms a distorted hexagonal bipyramidal geometry and crystallizes in the monoclinic space group P2 1 /n. Comparatively, crystallization of Ln(benzo-18-crown-6)I 2 (Ln = Sm, Eu, Yb) from the reaction of LnI2 with tetrabutylammonium tetraphenylborate and benzo-18-crown-6 in THF/ethanol under similarly air-free conditions yields two polymorphs. The first form, α, crystallizes in the monoclinic space group P2 1 /c (or the nonstandard setting P2 1 /n for α-Yb); whereas the second polymorph, β, crystallizes in P$\bar{1}$. While the geometries of the molecules only vary slightly, the molecular packing and intramolecular contacts are quite different. In the structure of β, π–π interactions between the benzo- moieties of adjacent molecules are observed, whereas these interactions are absent in α. Despite the similarities in these classically 4f n+1 lanthanide systems, the complexes display distinct spectroscopic features in their respective absorption and photoluminescence spectra. Broadband 5d → 4f photoluminescence was observed for the Sm and Eu compounds in the NIR region and UV–visible region, respectively. None of the three Yb compounds exhibit photoluminescence UV–visible-NIR region; however, a unique photooxidation event was observed resulting in characteristic Yb(III) 4f → 4f transitions in the NIR region of the absorption spectra of these compounds. Finally, these findings are discussed along with structural comparisons of the 18-crown-6 and benzo-18-crown-6 compounds as well as other reported Ln(II) crown complexes in the literature.

crystals↗

DOE OSTI2021

Interfacial and Confinement-Mediated Organization of Gas Hydrates, Water, Organic Fluids, and Nanoparticles for the Utilization of Subsurface Energy and Geological Resources

Harnessing the subsurface geologic environments in an efficient and environmentally sustainable manner is challenged by uncertainties associated with predicting the fate of fluids and sustaining porosity and permeability in subsurface geologic environments. Some of these uncertainties arise from confined and interfacially induced structures of fluids in subsurface geologic environments. The formation of gas hydrates, phase transitions of confined fluids, assembly and deposition of heavy hydrocarbons, and the agglomeration and fate of nanoparticles in confined environments are summarized in this review. Nanoscale confinement contributes to anisotropic structures and dynamics of fluids, which is the basis for anomalous phase transition thermodynamics, reactivity, transport, and geomechanical behavior. In this review, we discuss the structures of confined fluids and deviation in observed properties from bulk fluids. The factors influencing the structures of confined fluids can be generally divided into two groups: (a) pore characteristics including pore size, pore surface chemistry, and pore geometry and (b) confined fluid/solid characteristics such as molecular structure, concentrations, charges, pore filling, and presence of additives. Scientific advancements and knowledge gaps in our understanding of the structures of confined fluids and the associated differences in observed properties compared to bulk fluids are discussed. Here, the phenomena discussed in this review are of particular relevance to our efforts in harnessing the subsurface environments for a low carbon future by increasing the utilization of geothermal energy, using CO 2 as a working fluid, and storing CO 2 in subsurface geologic environments.

42 ENGINEERING↗

NASA NTRS1989

Rarefied gas flow through two-dimensional nozzles

A kinetic theory analysis is made of the flow of a rarefied gas from one reservoir to another through two-dimensional nozzles with arbitrary curvature. The Boltzmann equation simplified by a model collision integral is solved by means of finite-difference approximations with the discrete ordinate method. The physical space is transformed by a general grid generation technique and the velocity space is transformed to a polar coordinate system. A numerical code is developed which can be applied to any two-dimensional passage of complicated geometry for the flow regimes from free-molecular to slip. Numerical values of flow quantities can be calculated for the entire physical space including both inside the nozzle and in the outside plume. Predictions are made for the case of parallel slots and compared with existing literature data. Also, results for the cases of convergent or divergent slots and two-dimensional nozzles with arbitrary curvature at arbitrary knudsen number are presented.

De Witt, Kenneth J.↗

NASA NTRS1994

Magnetic field structure in Monoceros R2

We have carried out polarimetric observations to investigate the geometry of the magnetic field in the giant molecular cloud Monoceros R2. This study is based upon deep R-band charge coupled device (CCD) polarimetry, covering a total area of 0.5 deg(exp 2) of the giant molecular cloud. The data were calibrated using a new technique that relies on obtaining broad-band photometry of stars simultaneously with polarimetric photometry of the Mon R2 fields, thus providing an accurate means of measuring the electric vectors of starlight which is polarized by the fore-ground dust grains aligned by the magnetic field in the Mon R2 GMC. In this work, (1) we were able to continuously trace magnetic field lines from the largest scales in Mon R2 to the detailed structure of the field in the dense core, as determined from infrared polarimetry; and (2) we have found that the ambient field is apparently modified by a large-scale structure in the Mon R2 cloud. The mean angle of polarization for the complete sample we measured is 158 deg, which is roughly coincident with the local Galactic magnetic field (155 deg). The dispersion in the angle of polarization is 33 deg, similar to that found in the Orion GMC. The dispersion in angle of polarization for stars located along the western side of the three CCD fields is 22 deg. The CCD fields are bisected by a dense ridge of gas defining the boundary of an expanding gas shell that recent observational results at millimeter wavelengths now reveal dominates the Mon R2 GMC. Our results suggest th at the expanding shell has distorted the magnetic field lines extending from the core to the northern gas structure comprising Mon R2.

Jarrett, T. H.↗

DOE OSTI2024

Geometry-complete diffusion for 3D molecule generation and optimization

Abstract Generative deep learning methods have recently been proposed for generating 3D molecules using equivariant graph neural networks (GNNs) within a denoising diffusion framework. However, such methods are unable to learn important geometric properties of 3D molecules, as they adopt molecule-agnostic and non-geometric GNNs as their 3D graph denoising networks, which notably hinders their ability to generate valid large 3D molecules. In this work, we address these gaps by introducing the Geometry-Complete Diffusion Model (GCDM) for 3D molecule generation, which outperforms existing 3D molecular diffusion models by significant margins across conditional and unconditional settings for the QM9 dataset and the larger GEOM-Drugs dataset, respectively. Importantly, we demonstrate that GCDM’s generative denoising process enables the model to generate a significant proportion of valid and energetically-stable large molecules at the scale of GEOM-Drugs, whereas previous methods fail to do so with the features they learn. Additionally, we show that extensions of GCDM can not only effectively design 3D molecules for specific protein pockets but can be repurposed to consistently optimize the geometry and chemical composition of existing 3D molecules for molecular stability and property specificity, demonstrating new versatility of molecular diffusion models. Code and data are freely available on GitHub .

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

DOE OSTI2023

X-ray Absorption Spectroscopy Studies of a Molecular CO 2 -Reduction Catalyst Deposited on Graphitic Carbon Nitride

Metal-ligand complexes have been extensively explored as well-defined molecular catalysts in small molecule activation reactions such as carbon dioxide (CO 2 ) reduction. Many hybrid photocatalysts have been prepared by coupling such complexes with photoactive surfaces for use in solar CO 2 reduction. In this work, we employ X-ray absorption near edge structure (XANES) and extended X-ray absorption fine structure (EXAFS) spectroscopies, density functional theory (DFT) and computational XANES modeling to interrogate the structure of a hybrid photocatalyst consisting of a macrocyclic cobalt complex deposited on graphitic carbon nitride (C 3 N 4 ). Results show that the cobalt complex binds on C 3 N 4 through surface OH or NH 2 groups. By refining the local geometry and binding sites of this well-defined molecular cobalt complex on C 3 N 4 , here we established an important benchmark for modeling a large class of molecular catalysts that can be adapted to in situ/operando studies and further enhanced by applying chemometrics-based approaches and machine learning methods of XANES data analysis.

36 MATERIALS SCIENCE↗

NASA NTRS1986

Modeling of infrared flux spectra from disk-shaped interstellar dust clouds

Although there is growing observational and theoretical evidence for many disk-shaped objects of astrophysical interest, spherical geometry is assumed in most radiative transfer models. Recently we generalized the quasi-diffusion method developed by Leung (1975, 1976) for spherical geometry to solve the problem of scattering, absorption, and reemission by dust grains in a medium of disk geometry. The method is applicable to a variety of astronomical sources whose dynamics are angular-momentum dominated and hence not accurately treated by spherical geometry, e.g., protoplanetary nebulae, circumstellar disks, bipolar-flow molecular clouds, accretion disks and disk galaxies. Using this technique and realistic grain opacities we construct theoretical models to determine self-consistently the dust temperature distribution and infrared emission from disk-shaped, quiescent dark globules heated externally by the intersteller radiation field. The effects of the following parameters on the temperature structure and the emergent spectrum are studied: grain type (graphite and silicate), optical depth, density inhomogeneity, and degree of disk flattening. The disk models are characterized by an aspect ratio and an optical depth at 0.55 microns. For inhomogeneous models, a gaussian density distribution is assumed such that the ratio of central to surface density is 100. To study the effects of source geometry, we also compare results for models with spherical and disk geometry. In this case both models have the same radius and central optical depth, the disk models having a 1:1 aspect ratio. While the dust temperature distributions in the two cases are very similar, the emergent flux for the disk model depends sensitively on the viewing angle. For clouds which are unresolved, one would expect, since the thermal emission is isotropic in the neighborhood of an emitting grain, and since the emission (in the far infrared) is optically thin, that the emergent flux spectrum should be characteristic only of the dust temperature, and independent of viewing angle. However, because of the lack of complete symmetry and the resulting radiation anisotropy, this is found not to be the case for the disk models. Angle is that it implies a large uncertainty in estimating the radiation dust mass.

Spagna, G. F., Jr.↗

DOE OSTI2025

Single-Molecule Vibrational Characterization of Binding Geometry Effects on Isocyanide–Metal Interactions

Isocyanide−metal binding is governed by σ-donation and π-back-bonding, which affects the isocyanide stretching energy, a characteristic probe for ligand−metal interactions. While extensive correlations exist between structure and spectroscopy in molecular isocyanide−metal systems, interactions of isocyanide with crystalline metallic surfaces, where ligands often bind in various geometries, remain underexplored. Conventional vibrational spectroscopies such as infrared and Raman spectroscopies lack the molecular-scale resolution to distinguish this binding inhomogeneity. In contrast, inelastic electron tunneling spectroscopy with scanning tunneling microscopy (STM-IETS) directly visualizes ligand adsorption geometries and their vibrational signatures. Using STM-IETS, we investigate a metal-adsorbed m -terphenyl isocyanide ligand and find that the adsorption geometry on Cu(100) induces a significant shift in isocyanide stretching frequency, more prominent than replacing Cu(100) with Ag(111). Density functional theory confirms that this shift arises from atomic-scale variations in coordination environments. This study elucidates how precise binding influences the vibrational fingerprints of isocyanide ligands, an often-overlooked factor in understanding the isocyanide−metal interplay.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

NASA NTRS1987

A high-precision ab initio determination of the equilibrium geometry and force field of HOC(+)

The results of an ab initio molecular orbital investigation of the isoformyl cation, HOC(+), shape are reported. The effects of expanding the basis set to near the Hartree-Fock limit and of electron correlation were examined, and the results indicate that near the Hartree-Fock limit the HOC(+) is linear. An analytic potential function is presented, from which the calculated rotational energies are only 0.03 percent different from the experimental values. This represents a nearly two orders of magnitude reduction in error from earlier work.

Defrees, D. J.↗

NASA NTRS1981

Effective path length corrections in beam-beam scattering experiments

The effect of the change of scattering geometry with scattering angle in beam-beam experiments is investigated. Atomic (molecular) target distributions associated with static gas, orifice, tube, capillary array (with and without further collimation), and jet sources have been considered in model calculations for a number of commonly used electron scattering geometries. The relationship between scattering intensity, cross section, and the geometrical integral called 'effective path length' is derived. Volume correction factors (the reciprocal of effective path length) have been calculated for sample cases to illustrate the effect of various beam and scattering geometry characteristics. The validity of the model calculation has been experimentally verified. Most of the commonly used scattering geometries require significant correction of the scattering intensity distributions, but with proper planning scattering geometries can be designed such that the intensity and the cross section angular distribution are identical within 1%.

Brinkmann, R. T.↗

NASA NTRS1990

Parsec-Scale Penetration of UV into Molecular Clouds: CII 158 Micron Mapping of W3, NGC 1977, and NGC 2023

The spatial distribution of the 158 microns CII fine structure line in the galactic sources W3, NGC 1977, and NGC 2023 is mapped. The emission arises from warm (100 to 300 K), dense photodissociation regions at the surface of molecular gas. In all three sources, the emission extends over parsec scales or greater. For W3 and NGC 1977, where the UV source/molecular cloud geometry presents an edge on view of the variation of CII intensity into the molecular gas, two dimensional models of the CII emission which include the effects of gas clumping and scattering by dust on the transport of UV photons are constructed. The observed CII distribution and intensity is well modeled by a clumpy or filamentary distribution to the molecular gas, with a clump/interclump gas density ratio of 100 or more, which allows deep penetration of carbon ionizing UV photons into the clouds. The penetration of UV into clumped molecular clouds may also explain the extended far IR continuum emission from these sources. The total luminosity of CII emission from a clumpy molecular cloud with adjacent or embedded octave band stars can be as much as an order of magnitude higher than the CII luminosity of a uniform cloud. In addition, the extended penetration of UV into molecular clouds will affect the abundances of atomic and molecular species and increase the fractional ionization of interclump gas and UV illuminated clump surfaces.

Howe, J. E.↗

DOE OSTI2026

Integrated geological, economic, and risk assessment of underground hydrogen storage

Underground hydrogen storage (UHS) is a promising option to buffer variable renewable power and support the hydrogen economy. Yet this technology is early-stage, and key uncertainties remain about how coupled processes such as geochemical and geomechanical impacts affect long-term storage security. In this paper, we seek to integrate the results from a large, multi-scale research program to quantify core feasibility metrics and situate these studies within ongoing efforts. Through this work, we evaluate hydrogen recoverability during storage by assessing diffusive losses, losses to geochemical interactions and their subsequent impact on geomechanical properties, and losses to residual saturation during injection and withdrawal. Molecular and laboratory studies show that lithologic heterogeneity, pore geometry, and mineral surface chemistry govern hydrogen–rock interactions, controlling loss pathways. High-pressure coreflooding is used to estimate relative permeabilities and measure parameters needed for reservoir-scale sensitivity analyses. These core-scale experiments found early hydrogen breakthrough at low saturations driven by capillary and viscous fingering, which limits pore-space utilization at early times, while repeated injection and withdrawal cycles improve deliverability over time. Technoeconomic factors and purity requirements for end uses are also considered as part of our comprehensive feasibility analysis. Finally, we underscore the importance of geophysical monitoring and tailored injection strategies to maintain integrity and efficiency. Together, these results provide a quantitative foundation for safe, scalable deployment of UHS and highlight priorities for future integrated studies.

08 HYDROGEN↗

DOE OSTI2023

Molecular Dynamics Simulations of Calcite Fracture in Water

Calcite (CaCO 3 ) is one of the most common minerals in geologic and engineered systems. It is often in contact with aqueous solutions, causing chemically assisted fracture that is critical to understanding the stability of subsurface systems and manmade structures. Calcite fracture was evaluated with reactive molecular dynamics simulations, including the impacts of crack tip geometry (notch), the presence of water, and surface hydroxyl groups. Chemo-mechanical weakening was assessed by comparing the loads where fracture began to propagate. Our analyses show that in the presence of a notch, the load at which crack growth begins is lower, compared to the effect of water or surface hydroxyls. Additionally, the breaking of two adjacent Ca–O bonds is the kinetic limitation for crack initiation, since transiently broken bonds can reform, not resulting in crack growth. In aqueous environments, fresh (not hydroxylated) calcite surfaces exhibited water strengthening. Manual addition of H + and/or OH – species on the (104) calcite surface resulted in chemo-mechanical weakening of calcite by 9%. Achieving full hydroxylation of the calcite surface was thermodynamically and kinetically limited, with only 0.17–0.01 OH/nm 2 surface hydroxylation observed on the (104) surface at the end of the simulations. In conclusion, the limited reactivity of pure water with the calcite surface restricts the chemo-mechanical effects and suggests that reactions between physiosorbed water and localized structural defects may be dominating the chemo-mechanical process in the studies where water weakening has been reported.

Calcite↗

DOE OSTI2020

Cyclopropenylidenes as Strong Carbene Anchoring Groups on Au Surfaces

The creation of stable molecular monolayers on metallic surfaces is a fundamental challenge of surface chemistry. N-Heterocyclic carbenes (NHCs) were recently shown to form self-assembled monolayers that are significantly more stable than the traditional thiols on Au system. In this study, we theoretically and experimentally demonstrate that the smallest cyclic carbene, cyclopropenylidene, binds even more strongly than NHCs to Au surfaces without altering the surface structure. We deposit bis(diisopropylamino)cyclopropenylidene (BAC) on Au(111) using the molecular adduct BAC–CO 2 as a precursor and determine the structure, geometry, and behavior of the surface-bound molecules through high-resolution X-ray photoelectron spectroscopy, atomic force microscopy, and scanning tunneling microscopy. Our experiments are supported by density functional theory calculations of the molecular binding energy of BAC on Au(111) and its electronic structure. Our work is the first demonstration of surface modification with a stable carbene other than NHC; more broadly, it drives further exploration of various carbenes on metal surfaces.

77 NANOSCIENCE AND NANOTECHNOLOGY↗